MELO3C016000.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C016000.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	outer envelope pore protein 16-4, chloroplastic
Location	chr01: 31611125 .. 31614442 (-)
RNA-Seq Expression	MELO3C016000.jh1
Synteny	MELO3C016000.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGTAGACACAGAGCTCTCAGCATACGGACCTCCGAAGGAAATTGAGAATTGGAAGATGGAAGACGAACTCAACGGCGTCGTTCCTTGTTCTTCCCTCGCCGTCGAATCCAGCATTCGCGTCGGAACGGTAAACTTTACGAATAATTTCTCAAACTATGATTCATTTTCTTTAATTTCTTCCTCTGAATTTCCTGCCCCTGTTCATCTTCAGGCCGGCGCTCTATGGGGTTTGTGTTTGGGTCCGTACAATTCCCGTAAAAATGGTAATCTGAAAATCTATCTTATCGATTGATTTTTCTATTTCACTTTATCTTCTACACTTATTTTGTTTTCTCTCTTACAGGCCTCAGTGGCGTCAGCCATGCTGCTTTCGTGGTACCATACACTTGCTATTTAGCTTTGATTTACTTTTATTTGATTGAAATTGAGATTGTGGAGTTGTGGCGTCTGTCCAATGTGAAATCGTGTCTTTGTGATCTATTTTGCAGGCAAAGTCTGTTGGAAAATACGGCTTTCAATGTGGTAATGGTGACTGTCTTAGTATTTTGGCCTTTATAGATTGTTGAGCTGTGTTTGTGGCTGATTTTTTGCTTGGTTTTGTTCTGGTGGAAGAAATAGCTAAAGAATTTGGGTTGTAGGACTTGTTGCTGGAACTTTTACTCTGACTCACTGTGGGATTCAAAGATATAGAAGGAGGAATGATTGGGTTAGTCACACTCATGAAATGATTCATTTTCACATTTATCATTTGTTCGAATGTATCCACTGTGAAGGTTGCCTAGCTGTATTCCCAGAACTTGACCTCCCTTAGTTCATCGTGCATTAGATGGGTAACCCAAAAATGCCTCCCTCTTTTCGAGTGAATAATACCTCAAGAAAAGATGAGATTTCTGGTGACAGACAAATATAAAGGGTGTGGTAGAATGATTATACTTCAAATCATTCCCATCTAAAGCCATATCATTGGAAAGGCTCTGATTCTATTGAATTCTGTGTTTATCTTAGAACCTCTTCGGGTTACCTACTAATATATCATATACCAGTTATGGTTAATTAGATAATCATGGGCTCCACGTCAAAACCAAATTACAGTAAGAGAAGTAATTCATGTATGTTATAAATATTGCGAGGTATAGTCATTCATCTAATATGGGTACACAACATGTATCTCAAGATGGTGTCTCTTTGAGTTGACCATTGTTGGGTCAGATTCATATTATTGGGTTGAATCCATCTCCAAAACCAATGGTAGTCGAAGGAGTAACTCATATATCATGTAAAGATCATGAAGTCTCTTTTATCTTTTCGATGTGGGATACATAACATGATAAGTGTTTGGCTTTGTATTATACTTGCATCCCAATTTTGGTATGAGTCTCATCTTTTCAGTTACTTTCAAAATATATTTATTGGGAATCTCTCCTTTTTTACTAGGTTTTGAGTGAAGGTTTCCTAGGTTGAGCAGTTTTTACCACCTGATTATCTTTTTGTGGGAAAAAATGGGTGAGTGGAAATATAGAGGCATCCAAAAGTATTTACAACACTACCAAGTGTTTGGATGCAGTCATTTTAAAAAGATTTACTTTTCTAAAATAAATATAAATTAATTCCAACCATAAAGGAACGATATACCATTTGTAGAATTTATCTTGTTAGAAGTGTCTTAAATTTTCTTTATTAGTTTTATTGTTACACTGATAGGAATGCTATCAGGATCTTATTAGAGTATTAAGGATATATCAATAATTTGCTAGGGGTTTGTTATTCTTGTTGGTCTTAAAATGTTGGGGAGAGAAATGAAAAAGATACCCATTATTGTGGTGAATGAATTAGAATTTGAGAGAGATCTCAAGAGGGGAGGGTTCAAATTTCTCAATTACTTGGCTTATTTTGTAAGTTCCTTTACCTTTTATACTACAATACATTGCCGTCCTATTTTAGTTCCTATCATACTTATCTTTATTTTGGTTAAAAAGAATTTTAAGTTCAATGAAACACATATTTAAAATCTTGATGTAGAAATCCCGTGTCCCTTGCGTGATCAGCTTTCACACAGTTCTGAAAATTGTTGACAGCAGAAAGAACTGACCTTTTTACTTGGAATTGTTACTGCAACTCTTGGTAGATGATAACTCAACTGTATCTGGAATTTGAGGACCATTTATCCAGACTTGTATTTTCATTTAGAATTTAATGTTGATCAATGTTTCTTCTTAAGAAAACAATTAATTGTTGCTTAATATATTTAGACTTGCCTAACATAAACTATTTCCTATTCTGAAGAAAACATTCCAAGACTGCAGTTTTCTTTGGCGTGCTTAGAGGAGGTTTAATCGTGGCTAGGTTTTATGTCTTGTGAGCATTTGCGTCATTAGATTTCTTGAAATTATTCTTTAGGCCCGATACTTTTTTTTGGACTGGAGCCTTTTCTTGTAAGTTAGTTTCTGGTTTATTTTCTCTCAATGAAAGTTCGACTTTCCTGATTTAAAAAGTTTGGTTCCTTAGTTGTTACATATCTTATAGTCAATAAGCTTGGCTTACAACTATTTGGATATCAGATATGCATTGCCTTTTTGGGAATGTACGTTTGCTAAATAGGTTAAGCTTTTGTTTTGATCTTGAATACATTTCATTTTTCATTTCTTGTTCGAATGATTTTCATGCCAGAAATACCTACTCCAGCGACCAAGTTAACCAAAACTAAAGCAAACAAAATATATCTTTACACCTCTCTTTTCCATTTGGCAGTTGAATGGTTTGATCGCTGGTGCAGTCGCAGGAGCAGCCATTGCTACAAAGACTAGGAGTTGGTCACAGGTAGTTGGGATGGCTGCTCTTGTCTCTGCCTTCAGCGCTGCTGCTGAATATTCAAGATCACTTTAGAAAACCTCTTGTAGGAACGGTGAGTTACTCGGCATTTGATCCATTTCCACCATTTCCAATTGTGAATACAGGCTACGTGCTTTTACAAAATATTCTTCTATATAATGATTATGACAATTTTTACAAGTATAGCATCTCTTGTCCAGGATTCAGCAAGTGTCCTCTCATTATTCAACAAAATTGTTTGCTGTGTCGAGAAAGGTTTGTCTGTATCTGTTGAAGGAGGGAACGTAACCTCGTCGTGTCACTGTCAATAGGATTCGATCTTCATGATTGCAGCTAACTTCTGGGGAGTTAAAGCCGGAAAGATTGGGGAAGTAACTCCTTACCTTGATGTATAATAGCCATGAGCAACTGCTGTATAAGAAGATGAAACATCATATACAAATAGTTGATATTCCATTTCTTTCTTTAGTTTTACTTTCTACCGAAAC

mRNA sequence

TGGTAGACACAGAGCTCTCAGCATACGGACCTCCGAAGGAAATTGAGAATTGGAAGATGGAAGACGAACTCAACGGCGTCGTTCCTTGTTCTTCCCTCGCCGTCGAATCCAGCATTCGCGTCGGAACGGCCGGCGCTCTATGGGGTTTGTGTTTGGGTCCGTACAATTCCCGTAAAAATGGCCTCAGTGGCGTCAGCCATGCTGCTTTCGTGGCAAAGTCTGTTGGAAAATACGGCTTTCAATGTGGACTTGTTGCTGGAACTTTTACTCTGACTCACTGTGGGATTCAAAGATATAGAAGGAGGAATGATTGGTTGAATGGTTTGATCGCTGGTGCAGTCGCAGGAGCAGCCATTGCTACAAAGACTAGGAGTTGGTCACAGGTAGTTGGGATGGCTGCTCTTGTCTCTGCCTTCAGCGCTGCTGCTGAATATTCAAGATCACTTTAGAAAACCTCTTGTAGGAACGGATTCAGCAAGTGTCCTCTCATTATTCAACAAAATTGTTTGCTGTGTCGAGAAAGGTTTGTCTGTATCTGTTGAAGGAGGGAACGTAACCTCGTCGTGTCACTGTCAATAGGATTCGATCTTCATGATTGCAGCTAACTTCTGGGGAGTTAAAGCCGGAAAGATTGGGGAAGTAACTCCTTACCTTGATGTATAATAGCCATGAGCAACTGCTGTATAAGAAGATGAAACATCATATACAAATAGTTGATATTCCATTTCTTTCTTTAGTTTTACTTTCTACCGAAAC

Coding sequence (CDS)

ATGGAAGACGAACTCAACGGCGTCGTTCCTTGTTCTTCCCTCGCCGTCGAATCCAGCATTCGCGTCGGAACGGCCGGCGCTCTATGGGGTTTGTGTTTGGGTCCGTACAATTCCCGTAAAAATGGCCTCAGTGGCGTCAGCCATGCTGCTTTCGTGGCAAAGTCTGTTGGAAAATACGGCTTTCAATGTGGACTTGTTGCTGGAACTTTTACTCTGACTCACTGTGGGATTCAAAGATATAGAAGGAGGAATGATTGGTTGAATGGTTTGATCGCTGGTGCAGTCGCAGGAGCAGCCATTGCTACAAAGACTAGGAGTTGGTCACAGGTAGTTGGGATGGCTGCTCTTGTCTCTGCCTTCAGCGCTGCTGCTGAATATTCAAGATCACTTTAG

Protein sequence

MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYGFQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAFSAAAEYSRSL

Homology

[Close]

BLAST of MELO3C016000.jh1 vs. NCBI nr
Match: XP_008451566.1 (PREDICTED: outer envelope pore protein 16-4, chloroplastic [Cucumis melo] >KAA0067993.1 outer envelope pore protein 16-4 [Cucumis melo var. makuwa] >TYK18134.1 outer envelope pore protein 16-4 [Cucumis melo var. makuwa])

HSP 1 Score: 256 bits (653), Expect = 1.00e-85
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG
Sbjct: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF
Sbjct: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120

Query: 121 SAAAEYSRSL 130
           SAAAEYSRSL
Sbjct: 121 SAAAEYSRSL 130

[Close]

BLAST of MELO3C016000.jh1 vs. NCBI nr
Match: XP_004136026.1 (outer envelope pore protein 16-4, chloroplastic [Cucumis sativus] >KGN44942.1 hypothetical protein Csa_016585 [Cucumis sativus])

HSP 1 Score: 251 bits (641), Expect = 6.77e-84
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGL+GV+HAAFVA+SVGKYG
Sbjct: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLTGVAHAAFVARSVGKYG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLVAGTFTLTHCGIQRYR+RNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF
Sbjct: 61  FQCGLVAGTFTLTHCGIQRYRKRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120

Query: 121 SAAAEYSRSL 130
           SAAAEYSRSL
Sbjct: 121 SAAAEYSRSL 130

[Close]

BLAST of MELO3C016000.jh1 vs. NCBI nr
Match: XP_022143748.1 (outer envelope pore protein 16-4, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 246 bits (628), Expect = 6.50e-82
Identity = 123/130 (94.62%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           MEDELNGVVPCSSLAVES+IRVGTAGALWGLC+GPYNSRKNGL GV HAAFVAKSVGKYG
Sbjct: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLRGVGHAAFVAKSVGKYG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLVAGTFTLTHCGIQRYRR+NDWLNGLIAGAVAGAAIAT+TRSWSQV GMAALVSAF
Sbjct: 61  FQCGLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVFGMAALVSAF 120

Query: 121 SAAAEYSRSL 130
           SAAAEYSRSL
Sbjct: 121 SAAAEYSRSL 130

[Close]

BLAST of MELO3C016000.jh1 vs. NCBI nr
Match: XP_038896772.1 (outer envelope pore protein 16-4, chloroplastic [Benincasa hispida])

HSP 1 Score: 245 bits (626), Expect = 1.31e-81
Identity = 122/130 (93.85%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           ME+ELNGVVPCSSLAVES+IRVGTAGALWGLC+GPYNSRKNGLSGV HAAFVAKSVGKYG
Sbjct: 1   MEEELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVAKSVGKYG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLVAGTFTLTHCGIQRYRR+NDWLNGLIAGAVAGA IAT+TRSWSQVVGM ALVSAF
Sbjct: 61  FQCGLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAVIATRTRSWSQVVGMTALVSAF 120

Query: 121 SAAAEYSRSL 130
           SAAAEYSRSL
Sbjct: 121 SAAAEYSRSL 130

[Close]

BLAST of MELO3C016000.jh1 vs. NCBI nr
Match: XP_022960078.1 (outer envelope pore protein 16-4, chloroplastic [Cucurbita moschata] >XP_022960079.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita moschata] >XP_023004690.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita maxima] >XP_023004691.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita maxima] >XP_023513746.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023513747.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245 bits (626), Expect = 1.31e-81
Identity = 123/130 (94.62%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           MEDELNGVVPCSSLAVES+IRVGTAGALWGLC+GPYNSRKNGLSGV HAAFVAKSVGKYG
Sbjct: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVDHAAFVAKSVGKYG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLVAG FTLTHCGIQRYRR+NDWLNGLIAGAVAGAAIAT+TRSWSQV GMAALVSAF
Sbjct: 61  FQCGLVAGVFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVGGMAALVSAF 120

Query: 121 SAAAEYSRSL 130
           SAAAEYSRSL
Sbjct: 121 SAAAEYSRSL 130

[Close]

BLAST of MELO3C016000.jh1 vs. ExPASy Swiss-Prot
Match: Q9LZH8 (Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP164 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-45
Identity = 87/129 (67.44%), Postives = 107/129 (82.95%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           ME+EL   VPCSSL VES +RV TAG L+GLC GP ++RK GLSGVS A+FVAKS+G++G
Sbjct: 1   MEEELLSAVPCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSGVSQASFVAKSIGRFG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLV+G FT+THCG+QRYR +NDW+N L+ GAVAGAA+A  TR+W+QVVGMA LVSAF
Sbjct: 61  FQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRNWTQVVGMAGLVSAF 120

Query: 121 SAAAEYSRS 130
           S  A  +R+
Sbjct: 121 SVLANCTRT 129

[Close]

BLAST of MELO3C016000.jh1 vs. ExPASy Swiss-Prot
Match: Q5BIN4 (Mitochondrial import inner membrane translocase subunit Tim22 OS=Bos taurus OX=9913 GN=TIMM22 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 4.3e-04
Identity = 26/79 (32.91%), Postives = 42/79 (53.16%), Query Frame = 0


Query: 52  VAKSVGK----YGFQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSW 111
           V K +G+    Y     +V   F+ T C ++ YR ++DW N +I+G + G AI  +    
Sbjct: 114 VLKDMGQRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGLK 173

Query: 112 SQVVGMAALVSAFSAAAEY 127
           + V+G     +AFSAA +Y
Sbjct: 174 AGVIGCGGF-AAFSAAIDY 191

[Close]

BLAST of MELO3C016000.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VIR9 (Outer envelope pore protein 16-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00640 PE=4 SV=1)

HSP 1 Score: 256 bits (653), Expect = 4.84e-86
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG
Sbjct: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF
Sbjct: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120

Query: 121 SAAAEYSRSL 130
           SAAAEYSRSL
Sbjct: 121 SAAAEYSRSL 130

[Close]

BLAST of MELO3C016000.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BSK4 (outer envelope pore protein 16-4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492809 PE=4 SV=1)

HSP 1 Score: 256 bits (653), Expect = 4.84e-86
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG
Sbjct: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF
Sbjct: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120

Query: 121 SAAAEYSRSL 130
           SAAAEYSRSL
Sbjct: 121 SAAAEYSRSL 130

[Close]

BLAST of MELO3C016000.jh1 vs. ExPASy TrEMBL
Match: A0A0A0K992 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G397550 PE=4 SV=1)

HSP 1 Score: 251 bits (641), Expect = 3.28e-84
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGL+GV+HAAFVA+SVGKYG
Sbjct: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLTGVAHAAFVARSVGKYG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLVAGTFTLTHCGIQRYR+RNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF
Sbjct: 61  FQCGLVAGTFTLTHCGIQRYRKRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120

Query: 121 SAAAEYSRSL 130
           SAAAEYSRSL
Sbjct: 121 SAAAEYSRSL 130

[Close]

BLAST of MELO3C016000.jh1 vs. ExPASy TrEMBL
Match: A0A6J1CRH2 (outer envelope pore protein 16-4, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013582 PE=4 SV=1)

HSP 1 Score: 246 bits (628), Expect = 3.15e-82
Identity = 123/130 (94.62%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           MEDELNGVVPCSSLAVES+IRVGTAGALWGLC+GPYNSRKNGL GV HAAFVAKSVGKYG
Sbjct: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLRGVGHAAFVAKSVGKYG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLVAGTFTLTHCGIQRYRR+NDWLNGLIAGAVAGAAIAT+TRSWSQV GMAALVSAF
Sbjct: 61  FQCGLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVFGMAALVSAF 120

Query: 121 SAAAEYSRSL 130
           SAAAEYSRSL
Sbjct: 121 SAAAEYSRSL 130

[Close]

BLAST of MELO3C016000.jh1 vs. ExPASy TrEMBL
Match: A0A6J1KSU1 (outer envelope pore protein 16-4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111497910 PE=4 SV=1)

HSP 1 Score: 245 bits (626), Expect = 6.36e-82
Identity = 123/130 (94.62%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           MEDELNGVVPCSSLAVES+IRVGTAGALWGLC+GPYNSRKNGLSGV HAAFVAKSVGKYG
Sbjct: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVDHAAFVAKSVGKYG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLVAG FTLTHCGIQRYRR+NDWLNGLIAGAVAGAAIAT+TRSWSQV GMAALVSAF
Sbjct: 61  FQCGLVAGVFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVGGMAALVSAF 120

Query: 121 SAAAEYSRSL 130
           SAAAEYSRSL
Sbjct: 121 SAAAEYSRSL 130

[Close]

BLAST of MELO3C016000.jh1 vs. TAIR 10
Match: AT3G62880.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 183.7 bits (465), Expect = 9.3e-47
Identity = 87/129 (67.44%), Postives = 107/129 (82.95%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           ME+EL   VPCSSL VES +RV TAG L+GLC GP ++RK GLSGVS A+FVAKS+G++G
Sbjct: 1   MEEELLSAVPCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSGVSQASFVAKSIGRFG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLV+G FT+THCG+QRYR +NDW+N L+ GAVAGAA+A  TR+W+QVVGMA LVSAF
Sbjct: 61  FQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRNWTQVVGMAGLVSAF 120

Query: 121 SAAAEYSRS 130
           S  A  +R+
Sbjct: 121 SVLANCTRT 129

[Close]

BLAST of MELO3C016000.jh1 vs. TAIR 10
Match: AT3G62880.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 183.7 bits (465), Expect = 9.3e-47
Identity = 87/129 (67.44%), Postives = 107/129 (82.95%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           ME+EL   VPCSSL VES +RV TAG L+GLC GP ++RK GLSGVS A+FVAKS+G++G
Sbjct: 1   MEEELLSAVPCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSGVSQASFVAKSIGRFG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLV+G FT+THCG+QRYR +NDW+N L+ GAVAGAA+A  TR+W+QVVGMA LVSAF
Sbjct: 61  FQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRNWTQVVGMAGLVSAF 120

Query: 121 SAAAEYSRS 130
           S  A  +R+
Sbjct: 121 SVLANCTRT 129

[Close]

BLAST of MELO3C016000.jh1 vs. TAIR 10
Match: AT4G16160.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 41.2 bits (95), Expect = 7.4e-04
Identity = 31/83 (37.35%), Postives = 42/83 (50.60%), Query Frame = 0


Query: 52  VAKSVGKYGFQCGLVAGTFTLTHCGIQRYR-RRNDWLNGLIAGAVAGAAIATKT---RSW 111
           + K+ GK   Q GL AG ++    G+   R   +DW N  +AGA+ GAA+A  T    S 
Sbjct: 93  LVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALTGAAMAMTTSERTSH 152

Query: 112 SQVVGMAALVSAFSAAAEYSRSL 131
            QVV  A   +A S AA    S+
Sbjct: 153 EQVVQSALTGAAISTAANLLSSV 175

[Close]

BLAST of MELO3C016000.jh1 vs. TAIR 10
Match: AT4G16160.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 41.2 bits (95), Expect = 7.4e-04
Identity = 31/83 (37.35%), Postives = 42/83 (50.60%), Query Frame = 0


Query: 52  VAKSVGKYGFQCGLVAGTFTLTHCGIQRYR-RRNDWLNGLIAGAVAGAAIATKT---RSW 111
           + K+ GK   Q GL AG ++    G+   R   +DW N  +AGA+ GAA+A  T    S 
Sbjct: 95  LVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALTGAAMAMTTSERTSH 154

Query: 112 SQVVGMAALVSAFSAAAEYSRSL 131
            QVV  A   +A S AA    S+
Sbjct: 155 EQVVQSALTGAAISTAANLLSSV 177

The following BLAST results are available for this feature:

BLAST of MELO3C016000.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451566.1	1.00e-85	100.00	PREDICTED: outer envelope pore protein 16-4, chloroplastic [Cucumis melo] >KAA00...	[more]
XP_004136026.1	6.77e-84	96.92	outer envelope pore protein 16-4, chloroplastic [Cucumis sativus] >KGN44942.1 hy...	[more]
XP_022143748.1	6.50e-82	94.62	outer envelope pore protein 16-4, chloroplastic isoform X2 [Momordica charantia]	[more]
XP_038896772.1	1.31e-81	93.85	outer envelope pore protein 16-4, chloroplastic [Benincasa hispida]	[more]
XP_022960078.1	1.31e-81	94.62	outer envelope pore protein 16-4, chloroplastic [Cucurbita moschata] >XP_0229600...	[more]

BLAST of MELO3C016000.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZH8	1.3e-45	67.44	Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q5BIN4	4.3e-04	32.91	Mitochondrial import inner membrane translocase subunit Tim22 OS=Bos taurus OX=9...	[more]

BLAST of MELO3C016000.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VIR9	4.84e-86	100.00	Outer envelope pore protein 16-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3BSK4	4.84e-86	100.00	outer envelope pore protein 16-4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0K992	3.28e-84	96.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G397550 PE=4 SV=1	[more]
A0A6J1CRH2	3.15e-82	94.62	outer envelope pore protein 16-4, chloroplastic isoform X2 OS=Momordica charanti...	[more]
A0A6J1KSU1	6.36e-82	94.62	outer envelope pore protein 16-4, chloroplastic OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of MELO3C016000.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62880.1	9.3e-47	67.44	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT3G62880.2	9.3e-47	67.44	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT4G16160.1	7.4e-04	37.35	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT4G16160.2	7.4e-04	37.35	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 15..121 e-value: 7.6E-14 score: 52.1
None	No IPR available	PANTHER	PTHR14110:SF5	OUTER ENVELOPE PORE PROTEIN 16-4, CHLOROPLASTIC	coord: 1..129
IPR039175	Mitochondrial import inner membrane translocase subunit TIM22	PANTHER	PTHR14110	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22	coord: 1..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C016000.jh1.t1	MELO3C016000.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045039	protein insertion into mitochondrial inner membrane
cellular_component	GO:0042721	TIM22 mitochondrial import inner membrane insertion complex