MELO3C015888 (gene) Melon (DHL92) v4

Overview


Name	MELO3C015888
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	glutamic acid-rich protein
Location	chr01: 30414531 .. 30415265 (-)
RNA-Seq Expression	MELO3C015888
Synteny	MELO3C015888

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAATATTCTACTAAATAAATCAACAAACCCCCCCTTTTTCTTGTTTTCTTATTCTTTTGTTTCATTTGGTCATTATGCTCTCAACTAGTCCTCTCTTCTTCAACTTCTATCCTCACCATTTTGTTCATAACCAAGGCAACCACATTGAGGATATTTCCTCTTATTTTCTCTTCGAGGCCACTGGGGACTCCGAGGCTGACTCCTCGGTCGACCTTGAGAGCTCGTCCTCCGCCTCCACGACGGAGTTCAACGACGCGGAATCATGCACCGATGACACTCCTACTATGTTATGTAATAATGAAAATGAAGATGATGATGATGATGATGGAGATGGAGAAGAGATGGTTGAGAATGATGATGATGATCATGACGATGAAGATGAAGAAGAAGAAGAAGTAGTTGAAAGCAAGGCGATTGGATTTTCAATAAAGTCAAATGCTTCTATTGATTCAACTAAGGATGATTTCAAAATGTTGAATGAAGTTGATAAAAACAGGTTGTTTTGGGAGACTTGTTTGGCTTCATAGGGTTTTCTTTTATTTCTTTTTTTCATTTTTCCAATATCATTTCTGAAAAATTGGGAGGTTTGTGGTTTCTTTCTTTTAATTTTTTTTTTTTTTTTTTTTTAAAAAACACTTTTGTTGGTGGTGTTGTTTGATGATGCTTAAAATGTACATGAAAGCAAGAAATGGATTTTAATGATCCATTCAAGACACTGTTTTTCTTTTCTTTT

mRNA sequence

GTTAATATTCTACTAAATAAATCAACAAACCCCCCCTTTTTCTTGTTTTCTTATTCTTTTGTTTCATTTGGTCATTATGCTCTCAACTAGTCCTCTCTTCTTCAACTTCTATCCTCACCATTTTGTTCATAACCAAGGCAACCACATTGAGGATATTTCCTCTTATTTTCTCTTCGAGGCCACTGGGGACTCCGAGGCTGACTCCTCGGTCGACCTTGAGAGCTCGTCCTCCGCCTCCACGACGGAGTTCAACGACGCGGAATCATGCACCGATGACACTCCTACTATGTTATGTAATAATGAAAATGAAGATGATGATGATGATGATGGAGATGGAGAAGAGATGGTTGAGAATGATGATGATGATCATGACGATGAAGATGAAGAAGAAGAAGAAGTAGTTGAAAGCAAGGCGATTGGATTTTCAATAAAGTCAAATGCTTCTATTGATTCAACTAAGGATGATTTCAAAATGTTGAATGAAGTTGATAAAAACAGGTTGTTTTGGGAGACTTGTTTGGCTTCATAGGGTTTTCTTTTATTTCTTTTTTTCATTTTTCCAATATCATTTCTGAAAAATTGGGAGGTTTGTGGTTTCTTTCTTTTAATTTTTTTTTTTTTTTTTTTTTAAAAAACACTTTTGTTGGTGGTGTTGTTTGATGATGCTTAAAATGTACATGAAAGCAAGAAATGGATTTTAATGATCCATTCAAGACACTGTTTTTCTTTTCTTTT

Coding sequence (CDS)

ATGCTCTCAACTAGTCCTCTCTTCTTCAACTTCTATCCTCACCATTTTGTTCATAACCAAGGCAACCACATTGAGGATATTTCCTCTTATTTTCTCTTCGAGGCCACTGGGGACTCCGAGGCTGACTCCTCGGTCGACCTTGAGAGCTCGTCCTCCGCCTCCACGACGGAGTTCAACGACGCGGAATCATGCACCGATGACACTCCTACTATGTTATGTAATAATGAAAATGAAGATGATGATGATGATGATGGAGATGGAGAAGAGATGGTTGAGAATGATGATGATGATCATGACGATGAAGATGAAGAAGAAGAAGAAGTAGTTGAAAGCAAGGCGATTGGATTTTCAATAAAGTCAAATGCTTCTATTGATTCAACTAAGGATGATTTCAAAATGTTGAATGAAGTTGATAAAAACAGGTTGTTTTGGGAGACTTGTTTGGCTTCATAG

Protein sequence

MLSTSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSEADSSVDLESSSSASTTEFNDAESCTDDTPTMLCNNENEDDDDDDGDGEEMVENDDDDHDDEDEEEEEVVESKAIGFSIKSNASIDSTKDDFKMLNEVDKNRLFWETCLAS

Homology

[Close]

BLAST of MELO3C015888 vs. NCBI nr
Match: XP_008451422.1 (PREDICTED: glutamic acid-rich protein [Cucumis melo])

HSP 1 Score: 277.3 bits (708), Expect = 7.6e-71
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MLSTSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSEADSSVDLESSSSASTTEFND 60
           MLSTSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSEADSSVDLESSSSASTTEFND
Sbjct: 1   MLSTSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSEADSSVDLESSSSASTTEFND 60

Query: 61  AESCTDDTPTMLCNNENEDDDDDDGDGEEMVENDDDDHDDEDEEEEEVVESKAIGFSIKS 120
           AESCTDDTPTMLCNNENEDDDDDDGDGEEMVENDDDDHDDEDEEEEEVVESKAIGFSIKS
Sbjct: 61  AESCTDDTPTMLCNNENEDDDDDDGDGEEMVENDDDDHDDEDEEEEEVVESKAIGFSIKS 120

Query: 121 NASIDSTKDDFKMLNEVDKNRLFWETCLAS 151
           NASIDSTKDDFKMLNEVDKNRLFWETCLAS
Sbjct: 121 NASIDSTKDDFKMLNEVDKNRLFWETCLAS 150

[Close]

BLAST of MELO3C015888 vs. NCBI nr
Match: KAA0057545.1 (glutamic acid-rich protein [Cucumis melo var. makuwa])

HSP 1 Score: 262.3 bits (669), Expect = 2.5e-66
Identity = 146/150 (97.33%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 1   MLSTSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSEADSSVDLESSSSASTTEFND 60
           MLSTSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSEADSSVDLESSSSASTTEFND
Sbjct: 1   MLSTSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSEADSSVDLESSSSASTTEFND 60

Query: 61  AESCTDDTPTMLCNNENEDDDDDDGDGEEMVENDDDDHDDEDEEEEEVVESKAIGFSIKS 120
           AESCTDDTPTMLCNNENE DDDDDGDGEEMVENDDDDHD  +EEEEEVVESKAIGFSIKS
Sbjct: 61  AESCTDDTPTMLCNNENE-DDDDDGDGEEMVENDDDDHD--NEEEEEVVESKAIGFSIKS 120

Query: 121 NASIDSTKDDFKMLNEVDKNRLFWETCLAS 151
           NASIDSTKDDFKMLNEVDKNRLFWETCLAS
Sbjct: 121 NASIDSTKDDFKMLNEVDKNRLFWETCLAS 147

[Close]

BLAST of MELO3C015888 vs. NCBI nr
Match: XP_011659319.1 (nuclear polyadenylated RNA-binding protein 3 [Cucumis sativus] >KGN44840.1 hypothetical protein Csa_016864 [Cucumis sativus])

HSP 1 Score: 198.0 bits (502), Expect = 5.9e-47
Identity = 120/148 (81.08%), Postives = 130/148 (87.84%), Query Frame = 0


Query: 4   TSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSEADSSVDLESSSSASTTEFNDAES 63
           +SPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSE    VDL+SSS  S TEFNDAES
Sbjct: 3   SSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSE----VDLQSSSPVS-TEFNDAES 62

Query: 64  CTDDTP-TMLCNNENEDDDDDDGDGEEMVENDDDDHDDEDEEEEEVVESKAIGFSIKSNA 123
           CTDDT   MLCNNE+++D+++ G     VENDDDD  DE+EEEEEVVESKAIGFSIKSNA
Sbjct: 63  CTDDTDRIMLCNNEDDEDEEEMG-----VENDDDD-GDEEEEEEEVVESKAIGFSIKSNA 122

Query: 124 SIDSTKDDFKMLNEVDKNRLFWETCLAS 151
           SIDSTKD+FKMLNEVDKNRLFWETCLAS
Sbjct: 123 SIDSTKDEFKMLNEVDKNRLFWETCLAS 139

[Close]

BLAST of MELO3C015888 vs. NCBI nr
Match: XP_038896353.1 (uncharacterized protein LOC120084618 [Benincasa hispida])

HSP 1 Score: 171.4 bits (433), Expect = 5.9e-39
Identity = 110/150 (73.33%), Postives = 117/150 (78.00%), Query Frame = 0


Query: 1   MLSTSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSEADSSVDLESSSSASTTEFND 60
           MLST PLFFNFYPH F H QGNHIEDISSYFL EATGDSE DSSVDL    S ++TEFND
Sbjct: 1   MLST-PLFFNFYPHPFAHKQGNHIEDISSYFLLEATGDSEIDSSVDL--GGSVASTEFND 60

Query: 61  AESCTDDTPTMLCNNENEDDDDDDGDGEEMVENDDDDHDDEDEEEEEVVESKAIGFSIKS 120
           AESCTDDTPT +C NE    + +D D EEMVEND D          EVVESKAIGF+ KS
Sbjct: 61  AESCTDDTPT-ICTNEFGKYEYEDEDEEEMVENDYD----------EVVESKAIGFTTKS 120

Query: 121 NASIDSTKDDFKMLNEVDKNRLFWETCLAS 151
           NASIDSTK +FKMLNEVDKNRLFWETCLAS
Sbjct: 121 NASIDSTK-EFKMLNEVDKNRLFWETCLAS 135

[Close]

BLAST of MELO3C015888 vs. NCBI nr
Match: XP_022991734.1 (uncharacterized protein LOC111488264 [Cucurbita maxima])

HSP 1 Score: 139.4 bits (350), Expect = 2.5e-29
Identity = 96/150 (64.00%), Postives = 106/150 (70.67%), Query Frame = 0


Query: 1   MLSTSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSEADSSVDLESSSSASTTEFND 60
           MLST P FFNF+PH F    GNHIED SS+ LFEATGDSEADS V     SS  + EFND
Sbjct: 1   MLST-PFFFNFHPHQF----GNHIEDFSSHLLFEATGDSEADSLVG--HGSSTVSVEFND 60

Query: 61  AESCTDDTPTMLCNNENEDDDDDDGDGEEMVENDDDDHDDEDEEEEEVVESKAIGFSIKS 120
           AESCTDDTP M CN              +  ENDDDD DD+DEE +E VESK IGF  +S
Sbjct: 61  AESCTDDTPAM-CNE------------FKTYENDDDD-DDDDEENDEEVESKPIGFMTES 120

Query: 121 NASIDSTKDDFKMLNEVDKNRLFWETCLAS 151
           +ASIDS  ++FKMLNEVDKNRLFWETCLAS
Sbjct: 121 SASIDSA-EEFKMLNEVDKNRLFWETCLAS 128

[Close]

BLAST of MELO3C015888 vs. ExPASy TrEMBL
Match: A0A1S3BRI2 (glutamic acid-rich protein OS=Cucumis melo OX=3656 GN=LOC103492721 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 3.7e-71
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MLSTSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSEADSSVDLESSSSASTTEFND 60
           MLSTSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSEADSSVDLESSSSASTTEFND
Sbjct: 1   MLSTSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSEADSSVDLESSSSASTTEFND 60

Query: 61  AESCTDDTPTMLCNNENEDDDDDDGDGEEMVENDDDDHDDEDEEEEEVVESKAIGFSIKS 120
           AESCTDDTPTMLCNNENEDDDDDDGDGEEMVENDDDDHDDEDEEEEEVVESKAIGFSIKS
Sbjct: 61  AESCTDDTPTMLCNNENEDDDDDDGDGEEMVENDDDDHDDEDEEEEEVVESKAIGFSIKS 120

Query: 121 NASIDSTKDDFKMLNEVDKNRLFWETCLAS 151
           NASIDSTKDDFKMLNEVDKNRLFWETCLAS
Sbjct: 121 NASIDSTKDDFKMLNEVDKNRLFWETCLAS 150

[Close]

BLAST of MELO3C015888 vs. ExPASy TrEMBL
Match: A0A5A7UVG0 (Glutamic acid-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G00160 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.2e-66
Identity = 146/150 (97.33%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 1   MLSTSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSEADSSVDLESSSSASTTEFND 60
           MLSTSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSEADSSVDLESSSSASTTEFND
Sbjct: 1   MLSTSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSEADSSVDLESSSSASTTEFND 60

Query: 61  AESCTDDTPTMLCNNENEDDDDDDGDGEEMVENDDDDHDDEDEEEEEVVESKAIGFSIKS 120
           AESCTDDTPTMLCNNENE DDDDDGDGEEMVENDDDDHD  +EEEEEVVESKAIGFSIKS
Sbjct: 61  AESCTDDTPTMLCNNENE-DDDDDGDGEEMVENDDDDHD--NEEEEEVVESKAIGFSIKS 120

Query: 121 NASIDSTKDDFKMLNEVDKNRLFWETCLAS 151
           NASIDSTKDDFKMLNEVDKNRLFWETCLAS
Sbjct: 121 NASIDSTKDDFKMLNEVDKNRLFWETCLAS 147

[Close]

BLAST of MELO3C015888 vs. ExPASy TrEMBL
Match: A0A0A0K519 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G390190 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.9e-47
Identity = 120/148 (81.08%), Postives = 130/148 (87.84%), Query Frame = 0


Query: 4   TSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSEADSSVDLESSSSASTTEFNDAES 63
           +SPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSE    VDL+SSS  S TEFNDAES
Sbjct: 3   SSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSE----VDLQSSSPVS-TEFNDAES 62

Query: 64  CTDDTP-TMLCNNENEDDDDDDGDGEEMVENDDDDHDDEDEEEEEVVESKAIGFSIKSNA 123
           CTDDT   MLCNNE+++D+++ G     VENDDDD  DE+EEEEEVVESKAIGFSIKSNA
Sbjct: 63  CTDDTDRIMLCNNEDDEDEEEMG-----VENDDDD-GDEEEEEEEVVESKAIGFSIKSNA 122

Query: 124 SIDSTKDDFKMLNEVDKNRLFWETCLAS 151
           SIDSTKD+FKMLNEVDKNRLFWETCLAS
Sbjct: 123 SIDSTKDEFKMLNEVDKNRLFWETCLAS 139

[Close]

BLAST of MELO3C015888 vs. ExPASy TrEMBL
Match: A0A6J1JVN0 (uncharacterized protein LOC111488264 OS=Cucurbita maxima OX=3661 GN=LOC111488264 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.2e-29
Identity = 96/150 (64.00%), Postives = 106/150 (70.67%), Query Frame = 0


Query: 1   MLSTSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSEADSSVDLESSSSASTTEFND 60
           MLST P FFNF+PH F    GNHIED SS+ LFEATGDSEADS V     SS  + EFND
Sbjct: 1   MLST-PFFFNFHPHQF----GNHIEDFSSHLLFEATGDSEADSLVG--HGSSTVSVEFND 60

Query: 61  AESCTDDTPTMLCNNENEDDDDDDGDGEEMVENDDDDHDDEDEEEEEVVESKAIGFSIKS 120
           AESCTDDTP M CN              +  ENDDDD DD+DEE +E VESK IGF  +S
Sbjct: 61  AESCTDDTPAM-CNE------------FKTYENDDDD-DDDDEENDEEVESKPIGFMTES 120

Query: 121 NASIDSTKDDFKMLNEVDKNRLFWETCLAS 151
           +ASIDS  ++FKMLNEVDKNRLFWETCLAS
Sbjct: 121 SASIDSA-EEFKMLNEVDKNRLFWETCLAS 128

[Close]

BLAST of MELO3C015888 vs. ExPASy TrEMBL
Match: A0A6J1GRH1 (uncharacterized protein LOC111456367 OS=Cucurbita moschata OX=3662 GN=LOC111456367 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.8e-25
Identity = 89/150 (59.33%), Postives = 101/150 (67.33%), Query Frame = 0


Query: 1   MLSTSPLFFNFYPHHFVHNQGNHIEDISSYFLFEATGDSEADSSVDLESSSSASTTEFND 60
           MLST P FFNF+PH +    G HIED SS  LFEATGDSEADS V     SS  + EFND
Sbjct: 1   MLST-PFFFNFHPHQY----GTHIEDFSSQLLFEATGDSEADSLVG--HGSSTVSVEFND 60

Query: 61  AESCTDDTPTMLCNNENEDDDDDDGDGEEMVENDDDDHDDEDEEEEEVVESKAIGFSIKS 120
           AESCTD+TP M    +  +DDDDD              DDE+EEE   VESK IGF  +S
Sbjct: 61  AESCTDETPAMRNKVQTYEDDDDD--------------DDENEEE---VESKPIGFMTES 120

Query: 121 NASIDSTKDDFKMLNEVDKNRLFWETCLAS 151
           +ASIDS  ++FKMLNEV+KNRLFWETCLAS
Sbjct: 121 SASIDSA-EEFKMLNEVEKNRLFWETCLAS 125

The following BLAST results are available for this feature:

BLAST of MELO3C015888 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451422.1	7.6e-71	100.00	PREDICTED: glutamic acid-rich protein [Cucumis melo]	[more]
KAA0057545.1	2.5e-66	97.33	glutamic acid-rich protein [Cucumis melo var. makuwa]	[more]
XP_011659319.1	5.9e-47	81.08	nuclear polyadenylated RNA-binding protein 3 [Cucumis sativus] >KGN44840.1 hypot...	[more]
XP_038896353.1	5.9e-39	73.33	uncharacterized protein LOC120084618 [Benincasa hispida]	[more]
XP_022991734.1	2.5e-29	64.00	uncharacterized protein LOC111488264 [Cucurbita maxima]	[more]

BLAST of MELO3C015888 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C015888 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BRI2	3.7e-71	100.00	glutamic acid-rich protein OS=Cucumis melo OX=3656 GN=LOC103492721 PE=4 SV=1	[more]
A0A5A7UVG0	1.2e-66	97.33	Glutamic acid-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A0A0K519	2.9e-47	81.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G390190 PE=4 SV=1	[more]
A0A6J1JVN0	1.2e-29	64.00	uncharacterized protein LOC111488264 OS=Cucurbita maxima OX=3661 GN=LOC111488264...	[more]
A0A6J1GRH1	1.8e-25	59.33	uncharacterized protein LOC111456367 OS=Cucurbita moschata OX=3662 GN=LOC1114563...	[more]

BLAST of MELO3C015888 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..72
None	No IPR available	PANTHER	PTHR35726	GLUTAMIC ACID-RICH PROTEIN-LIKE	coord: 20..150
None	No IPR available	PANTHER	PTHR35726:SF4	GLUTAMIC ACID-RICH PROTEIN-LIKE	coord: 20..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C015888.1	MELO3C015888.1	mRNA