MELO3C015876.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C015876.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description39S ribosomal protein L46, mitochondrial-like isoform X2
Locationchr01: 30326379 .. 30329948 (+)
RNA-Seq ExpressionMELO3C015876.jh1
SyntenyMELO3C015876.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGAAAGCGCAACCCTCGCCGTCGACGGCCGCCCTCTCATTCTCAGGTGAACTCTTTGCGCCTTCTTCAACGGTAGCTTATGAATGCGTGTTCAGTATAGGTTATACCTCTTCTTAGAACTTCAATGCAAGTTCCAGTATCATTTCCTTCAAAACGTCTTGTATGGTTAATGAATTGCTGTTTCTTTCTTCTCTAATCGTTTATGTGTGATTCTCTCAAGTTCAGAATGCAGAGATCGTTAAGTTTTGCCAGTCAGCTCGTGAAGAGGCGAGGATTTTCGACGAATTCTGAGAAAATTGTAGCTAATGTACTGTTCGAGAGGCTGCCAATTGTGATTCCGAAGATTGACCCCGTGGTCTATGCATTTACGGAGTTCCGGTACGTTGTTTTTGCTTGTGTTTCATTTTTGGATTGAAAGAGTTGCTGTATCTTGATTTGATTTTCATCCGGATAGGGAGTATTTCTTATTTATTTCTTATTTCGATCGTTCAGCTTTGCTCGATTGTCTTCAGGTTTAGGTGGCAACAGCAATATCGACGCAAATATCCTGACGAATTTTTAGATAAAGCTGATGCCAGGTATATTTTTTTATCATTTTGTTTGGCTACGTCAAGTATAGAGTTTTGGTTTATGCATTGTTTTAACTTGACTTTCTCTTTGAACTCTTTTAATTCTTGTGACATTTTAAAGCATCAAGTTCTAGAGAGTGCTCTTTTAGTCTATTTTTTCATTTTGTCAAACATCATTATTCACAACAATGTGATATTAGTTATCATATTTCAGCTTATTTCATTCTTAAAAGTGCTAGACAATACTTTTGTGGGCTACTCTACTAGGGGCACCAGTTGATTCCAAACTTTGAGCAAGAAAATTTTTTGTGGAAGTAAAGAACGCCTATGTTACATAACTTTAAGTACCAATGAAATTTAATTATCAAAAGGACGACATTGGCTGACGATTGAGGAAAGTTGGTTTCAGTCCCTAATTACAACAGACTGCAAATTTCTAATGTGATTTGTTACACTGAGGTAATAACTTTTTCGTTCTCTTGGAAGTTGGAACTAACAACTTTTGGTACCGGAAGCAATTACAGAAAGTTACCAGTTATTGGTGTTAAACTTTATGACTTCCTTGGAGCCTTCTAAGATGAAGTTTTATGTTGATAAATCTTAGGGCTTTCTTTAGTAGTGAGCTCAGTATAATGTAGCTTTTGGGTGATCAATTTATATTTTCTTTGAATTATTTGCATGGATTATCTGGGTGGAGGATGACCAACTCTATAACGCGTTTTTCCTTAATTATATAAGTGCATGTTTATTGTCAAATGGGTGTTGGCGGTACTTGAATTTCGTATATATTACTACCACTCTAGCGCAATGTCATATGCCCGTAGGCCATTACATAATTTATATTTTGAAGGCTTTATCTCATGTTGCTATCAGTTTTCAGTTGGCTAATTGATGGAGCTTATTGAGCCAACACTGGATAAATGAGAATACATGGTTTTTCTTTCTTTTGGTAATTGTATGACTCAAGCTGCTGATAACAGGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACTGAAGCTGACAAAACAAACGACAGGAAGTATGCAATCTCTTCTTTTTTTATTTTTTCTTTATTTTTTTTCCGTCTCTCTCCCTCTCTCTTTAATATAACTTGGAATTGATTGATTGAAGGTTTCTTTGTCCATGCAACGTCACTATTGAGTGAAAAGAAACACAATCTATGAGTTTTCTTTTCTTTCTTTTTTCTTTTTTTTCCTTCTCCCTCCCTCTCTCTTTAATATTACTTAGAATTGATTGATTGAAGGCTTCTTTGTCCATGCAACGTCACTATTGAGTGAAAAGAAACACAATCTATGAGTTTTTGTTCTTGTTCATGCTAAATAATCTTCATTGTTGTGACATTTCTTCCCTGCAATTGTTTGTGGCACCTTGCAGTTCTTTTGTGTTTGTTTGAACATATTCTCGTTTCTTATAGAAAAACAAAACAAAATAACACTTCTATATCCCAATATTGCACATTGCATATCAAGCTCATGCGCATGCTGCTCTGTTAGGTGCTTTCAACTCATTTATTTTAGTGAAGCGCTCTTACATCTTTGAAACATAGTTCTACTTAGTTTTTATGATGACTGATGAAACTTGTTTTAGCCTTGGGGAAATCCCTTTCATTTGATTCATGTTAAAATTTCCAGATATCGTTGGATATCCAATAAATGTTAAAATTTTGTATTGCTTTGTTTCTATATCAGGCTATTGATGTCTTTCCTACTCTACAACTGAAGTTTCTAGGTGGTGTCTCTTAAATACAGAGACTCCCTTTTCTCGTTGTTTATTTAGAGTTCAGGCTATCTGATCCAAGTCATTAGTTTGCTACATTCTAAGCTCGAAATTGAGATTTACATTCTGGTTACTTGAATTGTTCTCTCCTTCTAGGTCACTGAAAAGAGCACTTGACAGAAGACTTTATCTTCTTCTCTATGGTCCCTCCATTGGGGCACCTGACGAGAAACCCATCTGGCACTTTCCAGAAAAAGTTTACGAGACCGAGGAGACATTACGTAAAGTAAGAGTTGGCTACCGGTACTCTTCAGTTCTATTTTTCATCATTTTTTACCCTTCTGACTTTCAAGTTCTACAGTGTGCAGAGTCTGCCTTGAAGTCCGTCCTTGGAGATCTTTCTCATACATATTTTGTTGGTAATGCTCCAATGGGTCATATGGTTGTACCACCTACAGAAACTGCACAAGTTCCAACTTTGAAGGTATATATCTTCTACTAAAAAATTTATATCATATAATAACTTCAAGCATCAGCAACTGGAATCGGTTAAAATATCATTTTGACCTCTTTACTTTGGAATTTGTTCTGCTTTAGTTTATGTATTTTCAATAAATCTTAAATTTAGTCCTTAAGAGTTATTTTTAAAAATTTGAAAGTGTAGGAACTAAAATGGAATAGATCCCAAATTACATGAATGAAACCGAAGTTCGTACTTGAACGCTGAGTATATAGTACAATGAGGTCATTTTATGTGTTTGCTTAAACGAAATCTCTCCTGTTTGCCAGCGATTCTTTTTTAAATCTCAAGTGGTTGCAACCGATAAATTCGATATTGGGAAATGTGAAGATTTTGTATGGGTTACAAAGGATGAATTGTTGGAGCATTTTCCTGATCAAGCGGAGTTTTTCAAGAAGATGATCATCAGTTGATGTTAGTAGATTGACGATAGGAAGCCTCACATAGATTGCCTCAATCAACAAATTTATGGTCAGGATGTAAGTGGCGTAGAGGATTTGAGTTATGAAATTTTAAATTAAGGGTTTGAGGCTGGAGGTTTTGTTTGTTGTTCTGAATGTAAAATGGACGAATGAGGATACCAATTTGGAATCAGTATTTAGGCAATTTCCTCTTTGCTGTTTCTTTGATTATTGGACAATCAGAATAAATGGTTCGATCCTCTTATTCTGATTTCTCGAACCAACAATAGCAATTGCAAAATTTGAATATAATGACTTTTTTTGGCA

mRNA sequence

ACGAAAGCGCAACCCTCGCCGTCGACGGCCGCCCTCTCATTCTCAGAATGCAGAGATCGTTAAGTTTTGCCAGTCAGCTCGTGAAGAGGCGAGGATTTTCGACGAATTCTGAGAAAATTGTAGCTAATGTACTGTTCGAGAGGCTGCCAATTGTGATTCCGAAGATTGACCCCGTGGTCTATGCATTTACGGAGTTCCGGTTTAGGTGGCAACAGCAATATCGACGCAAATATCCTGACGAATTTTTAGATAAAGCTGATGCCAGGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACTGAAGCTGACAAAACAAACGACAGGAAGTCACTGAAAAGAGCACTTGACAGAAGACTTTATCTTCTTCTCTATGGTCCCTCCATTGGGGCACCTGACGAGAAACCCATCTGGCACTTTCCAGAAAAAGTTTACGAGACCGAGGAGACATTACGTAAATGTGCAGAGTCTGCCTTGAAGTCCGTCCTTGGAGATCTTTCTCATACATATTTTGTTGGTAATGCTCCAATGGGTCATATGGTTGTACCACCTACAGAAACTGCACAAGTTCCAACTTTGAAGCGATTCTTTTTTAAATCTCAAGTGGTTGCAACCGATAAATTCGATATTGGGAAATGTGAAGATTTTGTATGGGTTACAAAGGATGAATTGTTGGAGCATTTTCCTGATCAAGCGGAGTTTTTCAAGAAGATGATCATCAGTTGATGTTAGTAGATTGACGATAGGAAGCCTCACATAGATTGCCTCAATCAACAAATTTATGGTCAGGATGTAAGTGGCGTAGAGGATTTGAGTTATGAAATTTTAAATTAAGGGTTTGAGGCTGGAGGTTTTGTTTGTTGTTCTGAATGTAAAATGGACGAATGAGGATACCAATTTGGAATCAGTATTTAGGCAATTTCCTCTTTGCTGTTTCTTTGATTATTGGACAATCAGAATAAATGGTTCGATCCTCTTATTCTGATTTCTCGAACCAACAATAGCAATTGCAAAATTTGAATATAATGACTTTTTTTGGCA

Coding sequence (CDS)

ATGCAGAGATCGTTAAGTTTTGCCAGTCAGCTCGTGAAGAGGCGAGGATTTTCGACGAATTCTGAGAAAATTGTAGCTAATGTACTGTTCGAGAGGCTGCCAATTGTGATTCCGAAGATTGACCCCGTGGTCTATGCATTTACGGAGTTCCGGTTTAGGTGGCAACAGCAATATCGACGCAAATATCCTGACGAATTTTTAGATAAAGCTGATGCCAGGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACTGAAGCTGACAAAACAAACGACAGGAAGTCACTGAAAAGAGCACTTGACAGAAGACTTTATCTTCTTCTCTATGGTCCCTCCATTGGGGCACCTGACGAGAAACCCATCTGGCACTTTCCAGAAAAAGTTTACGAGACCGAGGAGACATTACGTAAATGTGCAGAGTCTGCCTTGAAGTCCGTCCTTGGAGATCTTTCTCATACATATTTTGTTGGTAATGCTCCAATGGGTCATATGGTTGTACCACCTACAGAAACTGCACAAGTTCCAACTTTGAAGCGATTCTTTTTTAAATCTCAAGTGGTTGCAACCGATAAATTCGATATTGGGAAATGTGAAGATTTTGTATGGGTTACAAAGGATGAATTGTTGGAGCATTTTCCTGATCAAGCGGAGTTTTTCAAGAAGATGATCATCAGTTGA

Protein sequence

MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRRKYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAPDEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPTLKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS
Homology
BLAST of MELO3C015876.jh1 vs. NCBI nr
Match: XP_008451409.1 (PREDICTED: 54S ribosomal protein L17, mitochondrial isoform X2 [Cucumis melo] >XP_008451410.1 PREDICTED: 54S ribosomal protein L17, mitochondrial isoform X2 [Cucumis melo] >XP_016901078.1 PREDICTED: 54S ribosomal protein L17, mitochondrial isoform X2 [Cucumis melo] >TYK18277.1 54S ribosomal protein L17 [Cucumis melo var. makuwa])

HSP 1 Score: 469 bits (1206), Expect = 8.65e-167
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0

Query: 1   MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR 60
           MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR
Sbjct: 1   MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR 60

Query: 61  KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 120
           KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP
Sbjct: 61  KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 120

Query: 121 DEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT 180
           DEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT
Sbjct: 121 DEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT 180

Query: 181 LKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 229
           LKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS
Sbjct: 181 LKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 229

BLAST of MELO3C015876.jh1 vs. NCBI nr
Match: XP_008451408.1 (PREDICTED: 54S ribosomal protein L17, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 469 bits (1206), Expect = 1.08e-166
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0

Query: 1   MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR 60
           MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR
Sbjct: 7   MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR 66

Query: 61  KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 120
           KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP
Sbjct: 67  KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 126

Query: 121 DEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT 180
           DEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT
Sbjct: 127 DEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT 186

Query: 181 LKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 229
           LKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS
Sbjct: 187 LKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 235

BLAST of MELO3C015876.jh1 vs. NCBI nr
Match: KAA0057556.1 (54S ribosomal protein L17 [Cucumis melo var. makuwa])

HSP 1 Score: 455 bits (1170), Expect = 6.62e-161
Identity = 229/254 (90.16%), Postives = 229/254 (90.16%), Query Frame = 0

Query: 1   MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR 60
           MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR
Sbjct: 1   MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR 60

Query: 61  KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 120
           KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP
Sbjct: 61  KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 120

Query: 121 DEKPIWHFPEKVYETEETLRK-------------------------CAESALKSVLGDLS 180
           DEKPIWHFPEKVYETEETLRK                         CAESALKSVLGDLS
Sbjct: 121 DEKPIWHFPEKVYETEETLRKVRVGYRYSSVLFFIIFYPSDFQVLQCAESALKSVLGDLS 180

Query: 181 HTYFVGNAPMGHMVVPPTETAQVPTLKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEH 229
           HTYFVGNAPMGHMVVPPTETAQVPTLKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEH
Sbjct: 181 HTYFVGNAPMGHMVVPPTETAQVPTLKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEH 240

BLAST of MELO3C015876.jh1 vs. NCBI nr
Match: XP_011659323.1 (39S ribosomal protein L46, mitochondrial isoform X3 [Cucumis sativus])

HSP 1 Score: 447 bits (1150), Expect = 3.72e-158
Identity = 216/229 (94.32%), Postives = 222/229 (96.94%), Query Frame = 0

Query: 1   MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR 60
           MQRSL+FA QLVKRRGFSTNSEKIVA VLFERLP+VIPKIDPV+YAFT+F+FRWQQQYRR
Sbjct: 7   MQRSLNFAGQLVKRRGFSTNSEKIVAAVLFERLPVVIPKIDPVIYAFTDFQFRWQQQYRR 66

Query: 61  KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 120
           KYPDEFL+KAD RGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP
Sbjct: 67  KYPDEFLNKADGRGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 126

Query: 121 DEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT 180
           DEKPIWHFPEK YETEETLRKCAESALKSVLGDLS TYFVGNAPMGHMVVPPTETA VPT
Sbjct: 127 DEKPIWHFPEKAYETEETLRKCAESALKSVLGDLSQTYFVGNAPMGHMVVPPTETAPVPT 186

Query: 181 LKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 229
           LKRFFFKSQVVA DKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS
Sbjct: 187 LKRFFFKSQVVAADKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 235

BLAST of MELO3C015876.jh1 vs. NCBI nr
Match: XP_011659322.1 (39S ribosomal protein L46, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 447 bits (1150), Expect = 5.34e-158
Identity = 216/229 (94.32%), Postives = 222/229 (96.94%), Query Frame = 0

Query: 1   MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR 60
           MQRSL+FA QLVKRRGFSTNSEKIVA VLFERLP+VIPKIDPV+YAFT+F+FRWQQQYRR
Sbjct: 17  MQRSLNFAGQLVKRRGFSTNSEKIVAAVLFERLPVVIPKIDPVIYAFTDFQFRWQQQYRR 76

Query: 61  KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 120
           KYPDEFL+KAD RGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP
Sbjct: 77  KYPDEFLNKADGRGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 136

Query: 121 DEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT 180
           DEKPIWHFPEK YETEETLRKCAESALKSVLGDLS TYFVGNAPMGHMVVPPTETA VPT
Sbjct: 137 DEKPIWHFPEKAYETEETLRKCAESALKSVLGDLSQTYFVGNAPMGHMVVPPTETAPVPT 196

Query: 181 LKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 229
           LKRFFFKSQVVA DKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS
Sbjct: 197 LKRFFFKSQVVAADKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 245

BLAST of MELO3C015876.jh1 vs. ExPASy Swiss-Prot
Match: Q9EQI8 (39S ribosomal protein L46, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl46 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.2e-15
Identity = 51/136 (37.50%), Postives = 71/136 (52.21%), Query Frame = 0

Query: 80  IDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAPDEKPIWHFPEKVYETEETL 139
           + + P  R TEADK NDR SL R LDR L +LL    +G  D   +W  P+  ++  ETL
Sbjct: 127 LQFRPGARETEADKKNDRTSLHRKLDRNL-VLLVREKLGDQD---VWMLPQVEWQPGETL 186

Query: 140 RKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT---LKRFFFKSQVVATDKF 199
           R  AE  L ++  +     F+GNAP GH      +  Q  +   +K FFFK+ ++  D  
Sbjct: 187 RGTAERILATLSENNMEAKFLGNAPCGHYKFKFPKAIQTESDLGVKVFFFKALLLTGDFV 246

Query: 200 DIGKCEDFVWVTKDEL 213
             GK    VW +K+EL
Sbjct: 247 QAGKKSRHVWASKEEL 258

BLAST of MELO3C015876.jh1 vs. ExPASy Swiss-Prot
Match: P36528 (54S ribosomal protein L17, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRPL17 PE=1 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-14
Identity = 57/166 (34.34%), Postives = 83/166 (50.00%), Query Frame = 0

Query: 66  FLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAPDEKPI 125
           F +    + K D     +P  RITEAD++ND KSL+R L R LYLL+        D+   
Sbjct: 124 FSNNQKEQSKDDVNRPVIPNDRITEADRSNDMKSLERQLSRTLYLLV-------KDKSGT 183

Query: 126 WHFPE-KVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPTLKRF 185
           W FP   + +  + L   AE+ LK + GD  +T+ V   P+G +      TA+      F
Sbjct: 184 WKFPNFDLSDESKPLHVHAENELKLLSGDQIYTWSVSATPIGVLQDERNRTAE------F 243

Query: 186 FFKSQVVATDKFDI-----GKCEDFVWVTKDELLEHFPDQAEFFKK 226
             KS ++A  KFD+        EDF W+TK E+ E+ P   ++F K
Sbjct: 244 IVKSHILA-GKFDLVASKNDAFEDFAWLTKGEISEYVP--KDYFNK 273

BLAST of MELO3C015876.jh1 vs. ExPASy Swiss-Prot
Match: Q9H2W6 (39S ribosomal protein L46, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL46 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.1e-14
Identity = 51/129 (39.53%), Postives = 67/129 (51.94%), Query Frame = 0

Query: 87  RITEADKTNDRKSLKRALDRRLYLLLYGPSIGAPDEKPIWHFPEKVYETEETLRKCAESA 146
           RITEAD+ NDR SL R LDR L +LL     G  D   +W  P+  ++  ETLR  AE  
Sbjct: 136 RITEADEKNDRTSLNRKLDRNL-VLLVREKFGDQD---VWILPQAEWQPGETLRGTAERT 195

Query: 147 LKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT---LKRFFFKSQVVATDKFDIGKCED 206
           L ++  +     F+GNAP GH      +  +  +    K FFFK+ ++  D    G    
Sbjct: 196 LATLSENNMEAKFLGNAPCGHYTFKFPQAMRTESNLGAKVFFFKALLLTGDFSQAGNKGH 255

Query: 207 FVWVTKDEL 213
            VWVTKDEL
Sbjct: 256 HVWVTKDEL 260

BLAST of MELO3C015876.jh1 vs. ExPASy Swiss-Prot
Match: Q5RBU2 (39S ribosomal protein L46, mitochondrial OS=Pongo abelii OX=9601 GN=MRPL46 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.1e-14
Identity = 51/129 (39.53%), Postives = 67/129 (51.94%), Query Frame = 0

Query: 87  RITEADKTNDRKSLKRALDRRLYLLLYGPSIGAPDEKPIWHFPEKVYETEETLRKCAESA 146
           RITEAD+ NDR SL R LDR L +LL     G  D   +W  P+  ++  ETLR  AE  
Sbjct: 136 RITEADEKNDRTSLNRKLDRNL-VLLVREKFGDQD---VWILPQTEWQPGETLRGTAERT 195

Query: 147 LKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT---LKRFFFKSQVVATDKFDIGKCED 206
           L ++  +     F+GNAP GH      +  +  +    K FFFK+ ++  D    G    
Sbjct: 196 LATLSENNMEAKFLGNAPCGHYTFKFPQAMRTESNLGAKVFFFKALLLTGDFSQAGNKGH 255

Query: 207 FVWVTKDEL 213
            VWVTKDEL
Sbjct: 256 HVWVTKDEL 260

BLAST of MELO3C015876.jh1 vs. ExPASy Swiss-Prot
Match: Q5RK00 (39S ribosomal protein L46, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mrpl46 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.6e-14
Identity = 50/136 (36.76%), Postives = 71/136 (52.21%), Query Frame = 0

Query: 80  IDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAPDEKPIWHFPEKVYETEETL 139
           + + P  R TEADK NDR SL R LDR L +LL    +G  D   +W  P+  ++  ETL
Sbjct: 127 LQFRPGARETEADKKNDRTSLHRKLDRNL-ILLVREKLGDQD---LWMLPQVEWQPGETL 186

Query: 140 RKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT---LKRFFFKSQVVATDKF 199
           R  AE  L ++  +     F+GNAP GH      +  +  +   +K FFFK+ ++  D  
Sbjct: 187 RGTAERILATLSENNMEAKFLGNAPCGHYKFKFPKAIRTESDLGVKVFFFKALLLTGDFV 246

Query: 200 DIGKCEDFVWVTKDEL 213
             GK    VW +K+EL
Sbjct: 247 QTGKKGRHVWASKEEL 258

BLAST of MELO3C015876.jh1 vs. ExPASy TrEMBL
Match: A0A1S4DYN0 (54S ribosomal protein L17, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492711 PE=4 SV=1)

HSP 1 Score: 469 bits (1206), Expect = 4.19e-167
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0

Query: 1   MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR 60
           MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR
Sbjct: 1   MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR 60

Query: 61  KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 120
           KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP
Sbjct: 61  KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 120

Query: 121 DEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT 180
           DEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT
Sbjct: 121 DEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT 180

Query: 181 LKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 229
           LKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS
Sbjct: 181 LKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 229

BLAST of MELO3C015876.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D407 (54S ribosomal protein L17 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G002200 PE=4 SV=1)

HSP 1 Score: 469 bits (1206), Expect = 4.19e-167
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0

Query: 1   MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR 60
           MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR
Sbjct: 1   MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR 60

Query: 61  KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 120
           KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP
Sbjct: 61  KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 120

Query: 121 DEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT 180
           DEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT
Sbjct: 121 DEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT 180

Query: 181 LKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 229
           LKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS
Sbjct: 181 LKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 229

BLAST of MELO3C015876.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BS77 (54S ribosomal protein L17, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492711 PE=4 SV=1)

HSP 1 Score: 469 bits (1206), Expect = 5.21e-167
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0

Query: 1   MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR 60
           MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR
Sbjct: 7   MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR 66

Query: 61  KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 120
           KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP
Sbjct: 67  KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 126

Query: 121 DEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT 180
           DEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT
Sbjct: 127 DEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT 186

Query: 181 LKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 229
           LKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS
Sbjct: 187 LKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 235

BLAST of MELO3C015876.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UTU6 (54S ribosomal protein L17 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G00280 PE=4 SV=1)

HSP 1 Score: 455 bits (1170), Expect = 3.20e-161
Identity = 229/254 (90.16%), Postives = 229/254 (90.16%), Query Frame = 0

Query: 1   MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR 60
           MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR
Sbjct: 1   MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR 60

Query: 61  KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 120
           KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP
Sbjct: 61  KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 120

Query: 121 DEKPIWHFPEKVYETEETLRK-------------------------CAESALKSVLGDLS 180
           DEKPIWHFPEKVYETEETLRK                         CAESALKSVLGDLS
Sbjct: 121 DEKPIWHFPEKVYETEETLRKVRVGYRYSSVLFFIIFYPSDFQVLQCAESALKSVLGDLS 180

Query: 181 HTYFVGNAPMGHMVVPPTETAQVPTLKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEH 229
           HTYFVGNAPMGHMVVPPTETAQVPTLKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEH
Sbjct: 181 HTYFVGNAPMGHMVVPPTETAQVPTLKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEH 240

BLAST of MELO3C015876.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KAL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G391280 PE=4 SV=1)

HSP 1 Score: 447 bits (1150), Expect = 6.87e-158
Identity = 216/229 (94.32%), Postives = 222/229 (96.94%), Query Frame = 0

Query: 1   MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRR 60
           MQRSL+FA QLVKRRGFSTNSEKIVA VLFERLP+VIPKIDPV+YAFT+F+FRWQQQYRR
Sbjct: 44  MQRSLNFAGQLVKRRGFSTNSEKIVAAVLFERLPVVIPKIDPVIYAFTDFQFRWQQQYRR 103

Query: 61  KYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 120
           KYPDEFL+KAD RGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP
Sbjct: 104 KYPDEFLNKADGRGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAP 163

Query: 121 DEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPT 180
           DEKPIWHFPEK YETEETLRKCAESALKSVLGDLS TYFVGNAPMGHMVVPPTETA VPT
Sbjct: 164 DEKPIWHFPEKAYETEETLRKCAESALKSVLGDLSQTYFVGNAPMGHMVVPPTETAPVPT 223

Query: 181 LKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 229
           LKRFFFKSQVVA DKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS
Sbjct: 224 LKRFFFKSQVVAADKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 272

BLAST of MELO3C015876.jh1 vs. TAIR 10
Match: AT1G14620.1 (decoy )

HSP 1 Score: 339.0 bits (868), Expect = 3.0e-93
Identity = 160/220 (72.73%), Postives = 184/220 (83.64%), Query Frame = 0

Query: 11  LVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRRKYPDEFLDKA 70
           L  RRGF T+S+KIVA+VLFERL +VIPK DP VYAF EF+F WQQQ+RR+YPDEFLD A
Sbjct: 14  LESRRGFCTSSDKIVASVLFERLRVVIPKPDPAVYAFQEFKFNWQQQFRRRYPDEFLDIA 73

Query: 71  DARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAPDEKPIWHFPE 130
             R KG+YQ+DYVPAPRITEADK NDRKSL RALD++LYLL++G   GA  +KP+WHFPE
Sbjct: 74  KNRAKGEYQMDYVPAPRITEADKNNDRKSLYRALDKKLYLLIFGKPFGATSDKPVWHFPE 133

Query: 131 KVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPT-ETAQVPTLKRFFFKSQ 190
           KVY++E TLRKCAESALKSV+GDL+HTYFVGNAPM HM + PT E   +P+ KRFFFK  
Sbjct: 134 KVYDSEPTLRKCAESALKSVVGDLTHTYFVGNAPMAHMAIQPTEEMPDLPSYKRFFFKCS 193

Query: 191 VVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS 230
           VVA  K+DI  CEDFVWVTKDELLE FP+QAEFF KMIIS
Sbjct: 194 VVAASKYDISNCEDFVWVTKDELLEFFPEQAEFFNKMIIS 233

BLAST of MELO3C015876.jh1 vs. TAIR 10
Match: AT1G14620.2 (decoy )

HSP 1 Score: 264.2 bits (674), Expect = 9.5e-71
Identity = 125/188 (66.49%), Postives = 151/188 (80.32%), Query Frame = 0

Query: 11  LVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRRKYPDEFLDKA 70
           L  RRGF T+S+KIVA+VLFERL +VIPK DP VYAF EF+F WQQQ+RR+YPDEFLD A
Sbjct: 14  LESRRGFCTSSDKIVASVLFERLRVVIPKPDPAVYAFQEFKFNWQQQFRRRYPDEFLDIA 73

Query: 71  DARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAPDEKPIWHFPE 130
             R KG+YQ+DYVPAPRITEADK NDRKSL RALD++LYLL++G   GA  +KP+WHFPE
Sbjct: 74  KNRAKGEYQMDYVPAPRITEADKNNDRKSLYRALDKKLYLLIFGKPFGATSDKPVWHFPE 133

Query: 131 KVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPTLKRFFFKSQV 190
           KVY++E TLRKCAESALKSV+GDL+HTYFVGNAPM HM + PTE  ++P L  +    Q+
Sbjct: 134 KVYDSEPTLRKCAESALKSVVGDLTHTYFVGNAPMAHMAIQPTE--EMPDLPSYKVLLQM 193

Query: 191 VATDKFDI 199
             +   +I
Sbjct: 194 QCSSSIEI 199

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008451409.18.65e-167100.00PREDICTED: 54S ribosomal protein L17, mitochondrial isoform X2 [Cucumis melo] >X... [more]
XP_008451408.11.08e-166100.00PREDICTED: 54S ribosomal protein L17, mitochondrial isoform X1 [Cucumis melo][more]
KAA0057556.16.62e-16190.1654S ribosomal protein L17 [Cucumis melo var. makuwa][more]
XP_011659323.13.72e-15894.3239S ribosomal protein L46, mitochondrial isoform X3 [Cucumis sativus][more]
XP_011659322.15.34e-15894.3239S ribosomal protein L46, mitochondrial isoform X2 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Q9EQI87.2e-1537.5039S ribosomal protein L46, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl46 PE=1... [more]
P365281.2e-1434.3454S ribosomal protein L17, mitochondrial OS=Saccharomyces cerevisiae (strain ATC... [more]
Q9H2W62.1e-1439.5339S ribosomal protein L46, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL46 PE=1 ... [more]
Q5RBU22.1e-1439.5339S ribosomal protein L46, mitochondrial OS=Pongo abelii OX=9601 GN=MRPL46 PE=2 ... [more]
Q5RK003.6e-1436.7639S ribosomal protein L46, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mrpl46... [more]
Match NameE-valueIdentityDescription
A0A1S4DYN04.19e-167100.0054S ribosomal protein L17, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=L... [more]
A0A5D3D4074.19e-167100.0054S ribosomal protein L17 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S3BS775.21e-167100.0054S ribosomal protein L17, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=L... [more]
A0A5A7UTU63.20e-16190.1654S ribosomal protein L17 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo... [more]
A0A0A0KAL56.87e-15894.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G391280 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G14620.13.0e-9372.73decoy [more]
AT1G14620.29.5e-7166.49decoy [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.79.10Nucleoside Triphosphate Pyrophosphohydrolasecoord: 102..235
e-value: 1.0E-30
score: 108.2
NoneNo IPR availablePANTHERPTHR13124:SF14SUBFAMILY NOT NAMEDcoord: 7..235
IPR04000839S ribosomal protein L46, mitochondrialPANTHERPTHR1312439S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATEDcoord: 7..235

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C015876.jh1.t1MELO3C015876.jh1.t1mRNA
MELO3C015876.jh1.t2MELO3C015876.jh1.t2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003735 structural constituent of ribosome