MELO3C015876.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ACGAAAGCGCAACCCTCGCCGTCGACGGCCGCCCTCTCATTCTCAGGTGAACTCTTTGCGCCTTCTTCAACGGTAGCTTATGAATGCGTGTTCAGTATAGGTTATACCTCTTCTTAGAACTTCAATGCAAGTTCCAGTATCATTTCCTTCAAAACGTCTTGTATGGTTAATGAATTGCTGTTTCTTTCTTCTCTAATCGTTTATGTGTGATTCTCTCAAGTTCAGAATGCAGAGATCGTTAAGTTTTGCCAGTCAGCTCGTGAAGAGGCGAGGATTTTCGACGAATTCTGAGAAAATTGTAGCTAATGTACTGTTCGAGAGGCTGCCAATTGTGATTCCGAAGATTGACCCCGTGGTCTATGCATTTACGGAGTTCCGGTACGTTGTTTTTGCTTGTGTTTCATTTTTGGATTGAAAGAGTTGCTGTATCTTGATTTGATTTTCATCCGGATAGGGAGTATTTCTTATTTATTTCTTATTTCGATCGTTCAGCTTTGCTCGATTGTCTTCAGGTTTAGGTGGCAACAGCAATATCGACGCAAATATCCTGACGAATTTTTAGATAAAGCTGATGCCAGGTATATTTTTTTATCATTTTGTTTGGCTACGTCAAGTATAGAGTTTTGGTTTATGCATTGTTTTAACTTGACTTTCTCTTTGAACTCTTTTAATTCTTGTGACATTTTAAAGCATCAAGTTCTAGAGAGTGCTCTTTTAGTCTATTTTTTCATTTTGTCAAACATCATTATTCACAACAATGTGATATTAGTTATCATATTTCAGCTTATTTCATTCTTAAAAGTGCTAGACAATACTTTTGTGGGCTACTCTACTAGGGGCACCAGTTGATTCCAAACTTTGAGCAAGAAAATTTTTTGTGGAAGTAAAGAACGCCTATGTTACATAACTTTAAGTACCAATGAAATTTAATTATCAAAAGGACGACATTGGCTGACGATTGAGGAAAGTTGGTTTCAGTCCCTAATTACAACAGACTGCAAATTTCTAATGTGATTTGTTACACTGAGGTAATAACTTTTTCGTTCTCTTGGAAGTTGGAACTAACAACTTTTGGTACCGGAAGCAATTACAGAAAGTTACCAGTTATTGGTGTTAAACTTTATGACTTCCTTGGAGCCTTCTAAGATGAAGTTTTATGTTGATAAATCTTAGGGCTTTCTTTAGTAGTGAGCTCAGTATAATGTAGCTTTTGGGTGATCAATTTATATTTTCTTTGAATTATTTGCATGGATTATCTGGGTGGAGGATGACCAACTCTATAACGCGTTTTTCCTTAATTATATAAGTGCATGTTTATTGTCAAATGGGTGTTGGCGGTACTTGAATTTCGTATATATTACTACCACTCTAGCGCAATGTCATATGCCCGTAGGCCATTACATAATTTATATTTTGAAGGCTTTATCTCATGTTGCTATCAGTTTTCAGTTGGCTAATTGATGGAGCTTATTGAGCCAACACTGGATAAATGAGAATACATGGTTTTTCTTTCTTTTGGTAATTGTATGACTCAAGCTGCTGATAACAGGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACTGAAGCTGACAAAACAAACGACAGGAAGTATGCAATCTCTTCTTTTTTTATTTTTTCTTTATTTTTTTTCCGTCTCTCTCCCTCTCTCTTTAATATAACTTGGAATTGATTGATTGAAGGTTTCTTTGTCCATGCAACGTCACTATTGAGTGAAAAGAAACACAATCTATGAGTTTTCTTTTCTTTCTTTTTTCTTTTTTTTCCTTCTCCCTCCCTCTCTCTTTAATATTACTTAGAATTGATTGATTGAAGGCTTCTTTGTCCATGCAACGTCACTATTGAGTGAAAAGAAACACAATCTATGAGTTTTTGTTCTTGTTCATGCTAAATAATCTTCATTGTTGTGACATTTCTTCCCTGCAATTGTTTGTGGCACCTTGCAGTTCTTTTGTGTTTGTTTGAACATATTCTCGTTTCTTATAGAAAAACAAAACAAAATAACACTTCTATATCCCAATATTGCACATTGCATATCAAGCTCATGCGCATGCTGCTCTGTTAGGTGCTTTCAACTCATTTATTTTAGTGAAGCGCTCTTACATCTTTGAAACATAGTTCTACTTAGTTTTTATGATGACTGATGAAACTTGTTTTAGCCTTGGGGAAATCCCTTTCATTTGATTCATGTTAAAATTTCCAGATATCGTTGGATATCCAATAAATGTTAAAATTTTGTATTGCTTTGTTTCTATATCAGGCTATTGATGTCTTTCCTACTCTACAACTGAAGTTTCTAGGTGGTGTCTCTTAAATACAGAGACTCCCTTTTCTCGTTGTTTATTTAGAGTTCAGGCTATCTGATCCAAGTCATTAGTTTGCTACATTCTAAGCTCGAAATTGAGATTTACATTCTGGTTACTTGAATTGTTCTCTCCTTCTAGGTCACTGAAAAGAGCACTTGACAGAAGACTTTATCTTCTTCTCTATGGTCCCTCCATTGGGGCACCTGACGAGAAACCCATCTGGCACTTTCCAGAAAAAGTTTACGAGACCGAGGAGACATTACGTAAAGTAAGAGTTGGCTACCGGTACTCTTCAGTTCTATTTTTCATCATTTTTTACCCTTCTGACTTTCAAGTTCTACAGTGTGCAGAGTCTGCCTTGAAGTCCGTCCTTGGAGATCTTTCTCATACATATTTTGTTGGTAATGCTCCAATGGGTCATATGGTTGTACCACCTACAGAAACTGCACAAGTTCCAACTTTGAAGGTATATATCTTCTACTAAAAAATTTATATCATATAATAACTTCAAGCATCAGCAACTGGAATCGGTTAAAATATCATTTTGACCTCTTTACTTTGGAATTTGTTCTGCTTTAGTTTATGTATTTTCAATAAATCTTAAATTTAGTCCTTAAGAGTTATTTTTAAAAATTTGAAAGTGTAGGAACTAAAATGGAATAGATCCCAAATTACATGAATGAAACCGAAGTTCGTACTTGAACGCTGAGTATATAGTACAATGAGGTCATTTTATGTGTTTGCTTAAACGAAATCTCTCCTGTTTGCCAGCGATTCTTTTTTAAATCTCAAGTGGTTGCAACCGATAAATTCGATATTGGGAAATGTGAAGATTTTGTATGGGTTACAAAGGATGAATTGTTGGAGCATTTTCCTGATCAAGCGGAGTTTTTCAAGAAGATGATCATCAGTTGATGTTAGTAGATTGACGATAGGAAGCCTCACATAGATTGCCTCAATCAACAAATTTATGGTCAGGATGTAAGTGGCGTAGAGGATTTGAGTTATGAAATTTTAAATTAAGGGTTTGAGGCTGGAGGTTTTGTTTGTTGTTCTGAATGTAAAATGGACGAATGAGGATACCAATTTGGAATCAGTATTTAGGCAATTTCCTCTTTGCTGTTTCTTTGATTATTGGACAATCAGAATAAATGGTTCGATCCTCTTATTCTGATTTCTCGAACCAACAATAGCAATTGCAAAATTTGAATATAATGACTTTTTTTGGCA ACGAAAGCGCAACCCTCGCCGTCGACGGCCGCCCTCTCATTCTCAGAATGCAGAGATCGTTAAGTTTTGCCAGTCAGCTCGTGAAGAGGCGAGGATTTTCGACGAATTCTGAGAAAATTGTAGCTAATGTACTGTTCGAGAGGCTGCCAATTGTGATTCCGAAGATTGACCCCGTGGTCTATGCATTTACGGAGTTCCGGTTTAGGTGGCAACAGCAATATCGACGCAAATATCCTGACGAATTTTTAGATAAAGCTGATGCCAGGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACTGAAGCTGACAAAACAAACGACAGGAAGTCACTGAAAAGAGCACTTGACAGAAGACTTTATCTTCTTCTCTATGGTCCCTCCATTGGGGCACCTGACGAGAAACCCATCTGGCACTTTCCAGAAAAAGTTTACGAGACCGAGGAGACATTACGTAAATGTGCAGAGTCTGCCTTGAAGTCCGTCCTTGGAGATCTTTCTCATACATATTTTGTTGGTAATGCTCCAATGGGTCATATGGTTGTACCACCTACAGAAACTGCACAAGTTCCAACTTTGAAGCGATTCTTTTTTAAATCTCAAGTGGTTGCAACCGATAAATTCGATATTGGGAAATGTGAAGATTTTGTATGGGTTACAAAGGATGAATTGTTGGAGCATTTTCCTGATCAAGCGGAGTTTTTCAAGAAGATGATCATCAGTTGATGTTAGTAGATTGACGATAGGAAGCCTCACATAGATTGCCTCAATCAACAAATTTATGGTCAGGATGTAAGTGGCGTAGAGGATTTGAGTTATGAAATTTTAAATTAAGGGTTTGAGGCTGGAGGTTTTGTTTGTTGTTCTGAATGTAAAATGGACGAATGAGGATACCAATTTGGAATCAGTATTTAGGCAATTTCCTCTTTGCTGTTTCTTTGATTATTGGACAATCAGAATAAATGGTTCGATCCTCTTATTCTGATTTCTCGAACCAACAATAGCAATTGCAAAATTTGAATATAATGACTTTTTTTGGCA ATGCAGAGATCGTTAAGTTTTGCCAGTCAGCTCGTGAAGAGGCGAGGATTTTCGACGAATTCTGAGAAAATTGTAGCTAATGTACTGTTCGAGAGGCTGCCAATTGTGATTCCGAAGATTGACCCCGTGGTCTATGCATTTACGGAGTTCCGGTTTAGGTGGCAACAGCAATATCGACGCAAATATCCTGACGAATTTTTAGATAAAGCTGATGCCAGGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACTGAAGCTGACAAAACAAACGACAGGAAGTCACTGAAAAGAGCACTTGACAGAAGACTTTATCTTCTTCTCTATGGTCCCTCCATTGGGGCACCTGACGAGAAACCCATCTGGCACTTTCCAGAAAAAGTTTACGAGACCGAGGAGACATTACGTAAATGTGCAGAGTCTGCCTTGAAGTCCGTCCTTGGAGATCTTTCTCATACATATTTTGTTGGTAATGCTCCAATGGGTCATATGGTTGTACCACCTACAGAAACTGCACAAGTTCCAACTTTGAAGCGATTCTTTTTTAAATCTCAAGTGGTTGCAACCGATAAATTCGATATTGGGAAATGTGAAGATTTTGTATGGGTTACAAAGGATGAATTGTTGGAGCATTTTCCTGATCAAGCGGAGTTTTTCAAGAAGATGATCATCAGTTGA MQRSLSFASQLVKRRGFSTNSEKIVANVLFERLPIVIPKIDPVVYAFTEFRFRWQQQYRRKYPDEFLDKADARGKGDYQIDYVPAPRITEADKTNDRKSLKRALDRRLYLLLYGPSIGAPDEKPIWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVVPPTETAQVPTLKRFFFKSQVVATDKFDIGKCEDFVWVTKDELLEHFPDQAEFFKKMIIS Homology
BLAST of MELO3C015876.jh1 vs. NCBI nr
Match: XP_008451409.1 (PREDICTED: 54S ribosomal protein L17, mitochondrial isoform X2 [Cucumis melo] >XP_008451410.1 PREDICTED: 54S ribosomal protein L17, mitochondrial isoform X2 [Cucumis melo] >XP_016901078.1 PREDICTED: 54S ribosomal protein L17, mitochondrial isoform X2 [Cucumis melo] >TYK18277.1 54S ribosomal protein L17 [Cucumis melo var. makuwa]) HSP 1 Score: 469 bits (1206), Expect = 8.65e-167 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of MELO3C015876.jh1 vs. NCBI nr
Match: XP_008451408.1 (PREDICTED: 54S ribosomal protein L17, mitochondrial isoform X1 [Cucumis melo]) HSP 1 Score: 469 bits (1206), Expect = 1.08e-166 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of MELO3C015876.jh1 vs. NCBI nr
Match: KAA0057556.1 (54S ribosomal protein L17 [Cucumis melo var. makuwa]) HSP 1 Score: 455 bits (1170), Expect = 6.62e-161 Identity = 229/254 (90.16%), Postives = 229/254 (90.16%), Query Frame = 0
BLAST of MELO3C015876.jh1 vs. NCBI nr
Match: XP_011659323.1 (39S ribosomal protein L46, mitochondrial isoform X3 [Cucumis sativus]) HSP 1 Score: 447 bits (1150), Expect = 3.72e-158 Identity = 216/229 (94.32%), Postives = 222/229 (96.94%), Query Frame = 0
BLAST of MELO3C015876.jh1 vs. NCBI nr
Match: XP_011659322.1 (39S ribosomal protein L46, mitochondrial isoform X2 [Cucumis sativus]) HSP 1 Score: 447 bits (1150), Expect = 5.34e-158 Identity = 216/229 (94.32%), Postives = 222/229 (96.94%), Query Frame = 0
BLAST of MELO3C015876.jh1 vs. ExPASy Swiss-Prot
Match: Q9EQI8 (39S ribosomal protein L46, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl46 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 7.2e-15 Identity = 51/136 (37.50%), Postives = 71/136 (52.21%), Query Frame = 0
BLAST of MELO3C015876.jh1 vs. ExPASy Swiss-Prot
Match: P36528 (54S ribosomal protein L17, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRPL17 PE=1 SV=2) HSP 1 Score: 81.6 bits (200), Expect = 1.2e-14 Identity = 57/166 (34.34%), Postives = 83/166 (50.00%), Query Frame = 0
BLAST of MELO3C015876.jh1 vs. ExPASy Swiss-Prot
Match: Q9H2W6 (39S ribosomal protein L46, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL46 PE=1 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.1e-14 Identity = 51/129 (39.53%), Postives = 67/129 (51.94%), Query Frame = 0
BLAST of MELO3C015876.jh1 vs. ExPASy Swiss-Prot
Match: Q5RBU2 (39S ribosomal protein L46, mitochondrial OS=Pongo abelii OX=9601 GN=MRPL46 PE=2 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.1e-14 Identity = 51/129 (39.53%), Postives = 67/129 (51.94%), Query Frame = 0
BLAST of MELO3C015876.jh1 vs. ExPASy Swiss-Prot
Match: Q5RK00 (39S ribosomal protein L46, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mrpl46 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.6e-14 Identity = 50/136 (36.76%), Postives = 71/136 (52.21%), Query Frame = 0
BLAST of MELO3C015876.jh1 vs. ExPASy TrEMBL
Match: A0A1S4DYN0 (54S ribosomal protein L17, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492711 PE=4 SV=1) HSP 1 Score: 469 bits (1206), Expect = 4.19e-167 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of MELO3C015876.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D407 (54S ribosomal protein L17 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G002200 PE=4 SV=1) HSP 1 Score: 469 bits (1206), Expect = 4.19e-167 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of MELO3C015876.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BS77 (54S ribosomal protein L17, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492711 PE=4 SV=1) HSP 1 Score: 469 bits (1206), Expect = 5.21e-167 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of MELO3C015876.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UTU6 (54S ribosomal protein L17 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G00280 PE=4 SV=1) HSP 1 Score: 455 bits (1170), Expect = 3.20e-161 Identity = 229/254 (90.16%), Postives = 229/254 (90.16%), Query Frame = 0
BLAST of MELO3C015876.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KAL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G391280 PE=4 SV=1) HSP 1 Score: 447 bits (1150), Expect = 6.87e-158 Identity = 216/229 (94.32%), Postives = 222/229 (96.94%), Query Frame = 0
BLAST of MELO3C015876.jh1 vs. TAIR 10
Match: AT1G14620.1 (decoy ) HSP 1 Score: 339.0 bits (868), Expect = 3.0e-93 Identity = 160/220 (72.73%), Postives = 184/220 (83.64%), Query Frame = 0
BLAST of MELO3C015876.jh1 vs. TAIR 10
Match: AT1G14620.2 (decoy ) HSP 1 Score: 264.2 bits (674), Expect = 9.5e-71 Identity = 125/188 (66.49%), Postives = 151/188 (80.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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