MELO3C015812 (gene) Melon (DHL92) v4

Overview


Name	MELO3C015812
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr08: 6586548 .. 6586778 (-)
RNA-Seq Expression	MELO3C015812
Synteny	MELO3C015812

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAGTTGTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAAAGAAGGCGTCGTTGGAAGCGAAAGAAGGCATGTTGGAGGCGGAAGAAGGCGTCGTGCGGAAGAAGACGTCGTGCGGAAGAAGGCGTTCTTGAGAATGGTAAGGCGGAAGAAGGGAGAAAATCGTGGAGAATATATTGGAGAGGGAGAAAATCACGCAGACGA

mRNA sequence

AAGAAGTTGTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAAAGAAGGCGTCGTTGGAAGCGAAAGAAGGCATGTTGGAGGCGGAAGAAGGCGTCGTGCGGAAGAAGACGTCGTGCGGAAGAAGGCGTTCTTGAGAATGGTAAGGCGGAAGAAGGGAGAAAATCGTGGAGAATATATTGGAGAGGGAGAAAATCACGCAGACGA

Coding sequence (CDS)

ATGACGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAAAGAAGGCGTCGTTGGAAGCGAAAGAAGGCATGTTGGAGGCGGAAGAAGGCGTCGTGCGGAAGAAGACGTCGTGCGGAAGAAGGCGTTCTTGAGAATGGTAAGGCGGAAGAAGGGAGAAAATCGTGGAGAATATATTGGAGAGGGAGAAAATCACGCAGAC

Protein sequence

MTTGWRRKKASLEAKEGVVGSERRHVGGGRRRRAEEDVVRKKAFLRMVRRKKGENRGEYIGEGENHAD

Homology

[Close]

BLAST of MELO3C015812 vs. NCBI nr
Match: KAA0047052.1 (hypothetical protein E6C27_scaffold466G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 67.8 bits (164), Expect = 4.2e-08
Identity = 40/62 (64.52%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 1  MTTGWRRKKASLEAKEGVVGSERRHVGGGRRRRAEEDVVRKKAFLRMVRRKKGENRGEYI 60
          MTTGWRRKKASLEA EGV       VGGG RRRAEE VVRKKAFLRM       N+ E++
Sbjct: 22 MTTGWRRKKASLEANEGV-------VGGGTRRRAEEGVVRKKAFLRMEYLWSSVNQKEHL 76

Query: 61 GE 63
          G+
Sbjct: 82 GQ 76

[Close]

BLAST of MELO3C015812 vs. ExPASy TrEMBL
Match: A0A5A7TUB6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold466G00040 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.0e-08
Identity = 40/62 (64.52%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 1  MTTGWRRKKASLEAKEGVVGSERRHVGGGRRRRAEEDVVRKKAFLRMVRRKKGENRGEYI 60
          MTTGWRRKKASLEA EGV       VGGG RRRAEE VVRKKAFLRM       N+ E++
Sbjct: 22 MTTGWRRKKASLEANEGV-------VGGGTRRRAEEGVVRKKAFLRMEYLWSSVNQKEHL 76

Query: 61 GE 63
          G+
Sbjct: 82 GQ 76

[Close]

BLAST of MELO3C015812 vs. ExPASy TrEMBL
Match: A0A5A7SHI4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001610 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.8e-04
Identity = 28/39 (71.79%), Postives = 31/39 (79.49%), Query Frame = 0


Query: 1   MTTGWRRKKASLEAKEGVVGSERRHVGGGRRRRAEEDVV 40
           MTTGWR+KKASLEAKEG+       VGGGRRRRAEE V+
Sbjct: 99  MTTGWRQKKASLEAKEGI-------VGGGRRRRAEEGVL 130

The following BLAST results are available for this feature:

BLAST of MELO3C015812 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0047052.1	4.2e-08	64.52	hypothetical protein E6C27_scaffold466G00040 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C015812 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C015812 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TUB6	2.0e-08	64.52	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7SHI4	8.8e-04	71.79	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C015812 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..34

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C015812.1	MELO3C015812.1	mRNA