MELO3C015694 (gene) Melon (DHL92) v4

Overview


Name	MELO3C015694
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Pentatricopeptide repeat-containing protein
Location	chr01: 27547037 .. 27552233 (+)
RNA-Seq Expression	MELO3C015694
Synteny	MELO3C015694

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTTTTACCATTTCCCTAACTTTTATTTTTATTACTTAATTTGAAAAGGACTGATTACTTACCTTTATTAATATCCTATTAGGATAGACAGAAAAATCGTGGATGAAGAACAGGGGCGGGAGGGACTTTCGCCGGACAGGGAGACAGATAACGAACGATGAGTTTCTTACTAACTCTTCCGTCCCCGACGATTCTCAGTCCGCCGCTCAAGTTACCAAGCTCTGTCCGAAAACCATGCTGCCTGCAGCTAGGTAGGGCGGAGGGATATCCGAGAGTGACAATGAGAGGCGGAAGTGAAAACCGGAAGCCACTGCAGAAGGGGAGGAACCTCAGCATCGAAGCAATTCAAGCGGTGCAATCGTTGAAGCGAACAAAGAAAGATTTACAACAATTGGACCGAGTGTATGATTCCAAAATTAGGCGCTTATTGAAGTTTGATATGTTGGCTGTTCTTCGCGAGCTCCTTCGCCAGAACGAGTGTTCTTTGGCTCTTAAGGTGATTCCTCTGCACTCAATTCTTATGTTTATCTGCATCGTCGATTGATTAGTTATCGAAATTATTCAATATTGCACGATCGGTATCCATTTTTAGAGTTATCCACAGCAATGGCTAGATATTAATTTTTGCTGATTGTGGTTCCTTCAATATTTCTCGCTGATATTCTGTATTACTGTACTTTCGATTCACGAGTCTTAGGTTTTCGAAGATGTTAGAAATGAACACTGGTACAAGCCTCAGGTCTCGCTGTATGCTGATATTATTACAGTATTGGCTAGCAATGGATTGTTCGAACGAGTACAAATTATTCTTTCGTACATGAAAGCAGAGACTGATTTAGCACCTGAAATTGACGGGTTTAACGCTCTTTTGAAGGCATTGGTTGGTCATAATTTAGGTAAACTGGCGATGGAGTCGTATTATTTGATGAAGGAAGTAGGTTGTGAGCCAAATAAGGCTTCTTTCAGGATTGTAATAAAAGGATTGGAATTAAAGGGAGAGGCAGTTGATTTAAGAACTGTGAAACAGGATGCACAAAAGCTTTATGGTGAATCACTCGAGTTTTTGGAGGAAGCAGAAGAGGGAGCTACAGCCATATCTATACACTGAGCTGCAGAATCAGGAGTCAAATTATGGAATGGAAGGCATATACAGATGAAGTTGTGTCAAGAAAGATGGAGTTCATTAGCATTTCCTTTGAAGAAACCTGAAAAGACTCAGAAACTTCCCCTAGATATGAGCTTAACTGTACACTGGCTTAAGTCAACCCATGCTTTGCAGAGAATCTATGTGATAACTTTTCAGTCATGGAAAAATTGATACTAGTGATCTCATGAATGTTGGACGAGTTGTATCAGTTTACTCTCCTCATTCTTTATTCCCATGCCTGCTTGGCAGTGTCACTGGTTCACTGGTCTGTGCAGAGAAAAGCCGATCATCTTGCAACATACTTCAGCTCCTGTATGGTGAGCATGAGACAAATAAAAGGGGAAATACTAGAATATAAGTCTTAATCCAAGGTGAATGGTACATGATCTCTTTTTCCTCGCAAGAGTGCCGAATTATATGTATAACATATGAGGAACGAACCCAGTTAGGGATTGGTACATAGCTTCTGTAAAAACATGTATAGTAAAGATGAAAATTATGTGGGCTCTACTACGAGACTGCTAATTTTGTGCAGCCTGATTCTGATGTGTGTTTTACCCATCATGAGATTTAACATGCCAGTATACTTAAGTTCAAGTTCCTAGTTATATTCTATGGGCCTAAGATTTTGATTCTGATTCCTTAGTTGCATAAAGGTTTCAAAATTGTTTCCCTTCAAATGTCTGCCCATACTGCCAGTTTACAGGTGCAACGCTGTAGGAAGTAAGTGCTCTTCCACTGCTGGAGGTAACTTCAAAAGAGAGAGGTTGTCCGTGAAGATTGACATTGCTTTGCCAGTTCTGTCCCCAGTTCCTTGCCAATGGTATCCATCCCGTTCTTGATCCTTTTACTTTCACTGCCACCAATTCTCCATCCATTCCAACATTTGTAATCAGAACTTGAAAGAAACGAGAATTCCCACTAACTGTGAATCTCATTCCACCACTTCTGTCACACCTCACCCTACACAAATATTAAACAAGCTTTGTCCACTTAGCTTAGGACGACAAACTGTTTGAATCTATATGCATTTAGTTTGATTTTTACCTCCTATATTGAACTGGCACAATATCTGCTTTTTTCTCTGCTATTTCAGCAAATGCTGCCTCTGACATCTCAAAGTGCTCCTTGGGAAAATTACACCACCCGCCATAATCGGAAGACAAGCCGTAATTGGGAGGACAGAAGTCGGTGGCTGTTAGAATGACAGTCGGGCTTCCTTGCAAGCACCACAAGATGTGATCAACACATCTAAGCTCATAGCAGGCCCCACAGGTACTTCCTCTATTAAACAACATGCTACTCAGTCCAGCGCTGTATTTTCCATAATTTATCTTATGTAGGTCTCCGTAACCACAAGCACCTTCTGCAACATTAGTGATACAAAAAAGCAATTGAAATACCAATTTCCCTCCCTTTTGGTTACATGTCATGTCTCGTGCATATTTGAAATTTTTCAAGTGATTTTGAGAATGGTAAAAGTGATTTTAATCATTTCGAAATCACGCTAAAATATACACTTAATCATTCAAATCAATTAATGTTCAATGTTACACTTTTATTCACAATTTTCACATCATATAATTGATTTTGAATTATCAAAAGCATGTTCATATTGACTTTGAGCATGTAAAAAAATGTTTTTAACAATTTTGAAACCACTCCTAAACATGCCCTAAGCCGACCTATTTTCCAGTTTCCAACTTTTGAAGGTGGGGAGAGATTCCTTTAACAGAACCCGCACAGCCAGTGAGCAGTACGGCAACTCTTGAATACTCAAATAACAACTAGAAAAATAAGCTTCTTCAAACCCAGAAAAGCACCATGTTTAAACATGAATGTAATTTCGCGAACAGAAGGAAAACAGTACCCGTAACAATTGACCCATCTGTTTCTTTGGAGTATGTTGCAGTACCAGATTTCCATTCTTCATCCTTAGCCGCAAAGATATCAAATGTTTGAAGAAGGACCAAATAGTAGACTATCATAGCTACAAAACCAGCCATTTCAGAAGAATACAAGGCCTCGAAGAAGCCTGTGCTGTGTATGTACTCAAAATGAGGTATATTTCCTTTAGAAATTTGATTTTTTTTCCCCCTTAAGAAAAGCCCCTCTCTGCCTTCTTTTTCAGTATTCCCCTAATTTCTCGCTGAAATGATAGCAAGGAAGAGCGCAAGCCTCTTTGATTGCTGGAACACTATTCTGAAAAATAAAAAAGAGAATAAACTTTGACAAATCTCCAATTTTTATAGCCCTTTGTTCACATTGGTGGCGCTTTTAACGAGGCAAAGAACTATTCTTCTTAGTTTGCCGATAATTGGGGGGCTCAAAGAAGCAAATTTGGAGGCTTTCATTTTAGCCATTATCAATGTGGGAAGAGGTTGAGGCTCTATGTCAATGGCGGCAGATGCAGAGAGGAAATGCATCCATAAGAAACAGGTATGTGTTTTTCTCTCTTACTTTGTATATTAAATCAACTTTTAAGATCCCTTGAAATAGAAGAATAGAAAGAGAAGGATGGAAGCACTAAATAATGATATTAAGAAGGCAGAACTCAGAAAGTGGGGTATTTTGGTTTTGATTGTTGGATATTGGACCCAAATGGAGTTTTAAAAGGAGGTGTCTTTTGGTTTTATGGCTCATCTTTTCACGAGAAAAAAGGGTAGTGGATGTTTCTTAAAAACAAATACATAATAAAAAGAAAAAAAGAAAAGAAAAGAAAATATTAGTGGATGGGGTCCTTAGAGATGGAACCTTCTCTTGGCGGGAAACGGTGCTGGAGGGTTATTATTATTAATTATTATTGGTATTATTACGGAAAATATTTTAAAAGTTACAGAAAAAATCAAATAATTCTATAATAACAAAATATCACATTTTATTTATATTCACCATACAACTTACTTTGCCATGTAATTAGTTGTGTTCAATTGACTAAAAAATTTTGGTTTTTGTGAATTACGTACAGTTGTTATCATCTTTGATTTGGTTACTTTCTATTCGGTTTCATGGATTGGTTAAGTTTTACAAATAACCCATAAGTCATACCTTTTACGTATTTGAACATTAATTTATTTTCTTCCTCTTTCTGTTTTCTAAACTTTCTGACATAGACTGAAAACATTAAGGTAATTTAGTTGGCCAAAGTAAAATATAATCTCAATATCATGTTAATGTGTAAACAAATATATGACGTACCGGAATTGATTATTTCAAAAGTTGTTCAGTTTTTTTTTTATCCAAAGTCATGATTGTACTGTAGGGAAGAAATGTACCAAATTTGATACAATAGAGCTAAGGTTAATTTATAAGGTTTGAATAGCATAAATTGCCAAAACAAGCTTAGCTTGCCATTAATTGGCAAAACCTTCGCGAGGTTTCATCTCTTCTTTCCACCATTGTTGTATAAAGATGAACTCTCTCTTTTTTTTTTCTCTCTTTCTCTCTCTTTCTTTTTAAGGTTTCTTTTTTGTTTTACTATTTAGGCACATATTTATTTTTAGAATTGCAAATGATAATTGATATAAAGTTGAATAAATTTAATAAAAGTTACGTTTTAGTTCACTATCAACCATCCGCATCTTTGTCAAAGATAAATGCATCTCTCTATTCTAATAAAGGAAGAAAACTTCTGTTTTTATAGAGATTGTATTTGAGATTTCAATTTCATTATATCTATGTGAGATGAGAAATTTATAGAAGTGATTTAGGTTGATAATTTCGATGTTTTTTACTCTCAATATAAGTCCACAATGTTCTTATAGTATTTTTTTTTTGTACTAATAGTTAATATTCTTCTTATATGTTTTATGAGTTAAAGAAGACTAAAGGAAAAACACAAATGGGGGCGTTTAGAGCGTGAAGTGGTTTATTTATGTGGTTATTATAGTCTGTGACTTATAATAGTTTGTGTTTAAGATATAGATTATTATAGTATGGATTATTATAATCTGTGTTTGGGATGCAAATTACTGTAATTGAGTTACTGTTTGTTTGAATGGCAGATTATTATAATCTAAATTATATCAAAAGTGATTTTTTTTCTTTTA

mRNA sequence

ATCTTTTACCATTTCCCTAACTTTTATTTTTATTACTTAATTTGAAAAGGACTGATTACTTACCTTTATTAATATCCTATTAGGATAGACAGAAAAATCGTGGATGAAGAACAGGGGCGGGAGGGACTTTCGCCGGACAGGGAGACAGATAACGAACGATGAGTTTCTTACTAACTCTTCCGTCCCCGACGATTCTCAGTCCGCCGCTCAAGTTACCAAGCTCTGTCCGAAAACCATGCTGCCTGCAGCTAGGTAGGGCGGAGGGATATCCGAGAGTGACAATGAGAGGCGGAAGTGAAAACCGGAAGCCACTGCAGAAGGGGAGGAACCTCAGCATCGAAGCAATTCAAGCGGTGCAATCGTTGAAGCGAACAAAGAAAGATTTACAACAATTGGACCGAGTGTATGATTCCAAAATTAGGCGCTTATTGAAGTTTGATATGTTGGCTGTTCTTCGCGAGCTCCTTCGCCAGAACGAGTGTTCTTTGGCTCTTAAGGTTTTCGAAGATGTTAGAAATGAACACTGGTACAAGCCTCAGGTCTCGCTGTATGCTGATATTATTACAGTATTGGCTAGCAATGGATTGTTCGAACGAGTACAAATTATTCTTTCGTACATGAAAGCAGAGACTGATTTAGCACCTGAAATTGACGGGTTTAACGCTCTTTTGAAGGCATTGGTTGGTCATAATTTAGGTAAACTGGCGATGGAGTCGTATTATTTGATGAAGGAAGTAGGTTGTGAGCCAAATAAGGCTTCTTTCAGGATTGTAATAAAAGGATTGGAATTAAAGGGAGAGGCAGTTGATTTAAGAACTGTGAAACAGGATGCACAAAAGCTTTATGGTGAATCACTCGAGTTTTTGGAGGAAGCAGAAGAGGGAGCTACAGCCATATCTATACACTGAGCTGCAGAATCAGGAGTCAAATTATGGAATGGAAGGCATATACAGATGAAGTTGTGTCAAGAAAGATGGAGTTCATTAGCATTTCCTTTGAAGAAACCTGAAAAGACTCAGAAACTTCCCCTAGATATGAGCTTAACTGTACACTGGCTTAAGTCAACCCATGCTTTGCAGAGAATCTATGTGATAACTTTTCAGTCATGGAAAAATTGATACTAGTGATCTCATGAATGTTGGACGAGTTGTATCAGTTTACTCTCCTCATTCTTTATTCCCATGCCTGCTTGGCAGTGTCACTGGTTCACTGGTCTGTGCAGAGAAAAGCCGATCATCTTGCAACATACTTCAGCTCCTGTATGGTGAGCATGAGACAAATAAAAGGGGAAATACTAGAATATAAGTCTTAATCCAAGGTGAATGGTACATGATCTCTTTTTCCTCGCAAGAGTGCCGAATTATATGTATAACATATGAGGAACGAACCCAGTTAGGGATTGGTACATAGCTTCTGTAAAAACATGTATAGTAAAGATGAAAATTATGTGGGCTCTACTACGAGACTGCTAATTTTGTGCAGCCTGATTCTGATGTGTGTTTTACCCATCATGAGATTTAACATGCCAGTATACTTAAGTTCAAGTTCCTAGTTATATTCTATGGGCCTAAGATTTTGATTCTGATTCCTTAGTTGCATAAAGGTTTCAAAATTGTTTCCCTTCAAATGTCTGCCCATACTGCCAGTTTACAGGTGCAACGCTGTAGGAAGTAAGTGCTCTTCCACTGCTGGAGGTAACTTCAAAAGAGAGAGGTTGTCCGTGAAGATTGACATTGCTTTGCCAGTTCTGTCCCCAGTTCCTTGCCAATGCAAATGCTGCCTCTGACATCTCAAAGTGCTCCTTGGGAAAATTACACCACCCGCCATAATCGGAAGACAAGCCGTAATTGGGAGGACAGAAGTCGGTGGCTGTTAGAATGACAGTCGGGCTTCCTTGCAAGCACCACAAGATGTGATCAACACATCTAAGCTCATAGCAGGCCCCACAGTTTCCAACTTTTGAAGGTGGGGAGAGATTCCTTTAACAGAACCCGCACAGCCAGTGAGCAGTACGGCAACTCTTGAATACTCAAATAACAACTAGAAAAATAAGCTTCTTCAAACCCAGAAAAGCACCATGTTTAAACATGAATGTAATTTCGCGAACAGAAGGAAAACAGTACCCGTAACAATTGACCCATCTGTTTCTTTGGAGTATGTTGCAGTACCAGATTTCCATTCTTCATCCTTAGCCGCAAAGATATCAAATGTTTGAAGAAGGACCAAATAGTAGACTATCATAGCTACAAAACCAGCCATTTCAGAAGAATACAAGGCCTCGAAGAAGCCTGTGCTGTGTATGTACTCAAAATGAGCCCTTTGTTCACATTGGTGGCGCTTTTAACGAGGCAAAGAACTATTCTTCTTAGTTTGCCGATAATTGGGGGGCTCAAAGAAGCAAATTTGGAGGCTTTCATTTTAGCCATTATCAATGTGGGAAGAGGTTGAGGCTCTATGTCAATGGCGGCAGATGCAGAGAGGAAATGCATCCATAAGAAACAGGTATGTGTTTTTCTCTCTTACTTTGTATATTAAATCAACTTTTAAGATCCCTTGAAATAGAAGAATAGAAAGAGAAGGATGGAAGCACTAAATAATGATATTAAGAAGGCAGAACTCAGAAAGTGGGGTATTTTGGTTTTGATTGTTGGATATTGGACCCAAATGGAGTTTTAAAAGGAGGTGTCTTTTGGTTTTATGGCTCATCTTTTCACGAGAAAAAAGGGTAGTGGATGTTTCTTAAAAACAAATACATAATAAAAAGAAAAAAAGAAAAGAAAAGAAAATATTAGTGGATGGGGTCCTTAGAGATGGAACCTTCTCTTGGCGGGAAACGGTGCTGGAGGGTTATTATTATTAATTATTATTGGTATTATTACGGAAAATATTTTAAAAGTTACAGAAAAAATCAAATAATTCTATAATAACAAAATATCACATTTTATTTATATTCACCATACAACTTACTTTGCCATGTAATTAGTTGTGTTCAATTGACTAAAAAATTTTGGTTTTTGTGAATTACGTACAGTTGTTATCATCTTTGATTTGGTTACTTTCTATTCGGTTTCATGGATTGGTTAAGTTTTACAAATAACCCATAAGTCATACCTTTTACGTATTTGAACATTAATTTATTTTCTTCCTCTTTCTGTTTTCTAAACTTTCTGACATAGACTGAAAACATTAAGGTAATTTAGTTGGCCAAAGTAAAATATAATCTCAATATCATGTTAATGTGTAAACAAATATATGACGTACCGGAATTGATTATTTCAAAAGTTGTTCAGTTTTTTTTTTATCCAAAGTCATGATTGTACTGTAGGGAAGAAATGTACCAAATTTGATACAATAGAGCTAAGGTTAATTTATAAGGTTTGAATAGCATAAATTGCCAAAACAAGCTTAGCTTGCCATTAATTGGCAAAACCTTCGCGAGGTTTCATCTCTTCTTTCCACCATTGTTGTATAAAGATGAACTCTCTCTTTTTTTTTTCTCTCTTTCTCTCTCTTTCTTTTTAAGGTTTCTTTTTTGTTTTACTATTTAGGCACATATTTATTTTTAGAATTGCAAATGATAATTGATATAAAGTTGAATAAATTTAATAAAAGTTACGTTTTAGTTCACTATCAACCATCCGCATCTTTGTCAAAGATAAATGCATCTCTCTATTCTAATAAAGGAAGAAAACTTCTGTTTTTATAGAGATTGTATTTGAGATTTCAATTTCATTATATCTATGTGAGATGAGAAATTTATAGAAGTGATTTAGGTTGATAATTTCGATGTTTTTTACTCTCAATATAAGTCCACAATGTTCTTATAGTATTTTTTTTTTGTACTAATAGTTAATATTCTTCTTATATGTTTTATGAGTTAAAGAAGACTAAAGGAAAAACACAAATGGGGGCGTTTAGAGCGTGAAGTGGTTTATTTATGTGGTTATTATAGTCTGTGACTTATAATAGTTTGTGTTTAAGATATAGATTATTATAGTATGGATTATTATAATCTGTGTTTGGGATGCAAATTACTGTAATTGAGTTACTGTTTGTTTGAATGGCAGATTATTATAATCTAAATTATATCAAAAGTGATTTTTTTTCTTTTA

Coding sequence (CDS)

ATGAGTTTCTTACTAACTCTTCCGTCCCCGACGATTCTCAGTCCGCCGCTCAAGTTACCAAGCTCTGTCCGAAAACCATGCTGCCTGCAGCTAGGTAGGGCGGAGGGATATCCGAGAGTGACAATGAGAGGCGGAAGTGAAAACCGGAAGCCACTGCAGAAGGGGAGGAACCTCAGCATCGAAGCAATTCAAGCGGTGCAATCGTTGAAGCGAACAAAGAAAGATTTACAACAATTGGACCGAGTGTATGATTCCAAAATTAGGCGCTTATTGAAGTTTGATATGTTGGCTGTTCTTCGCGAGCTCCTTCGCCAGAACGAGTGTTCTTTGGCTCTTAAGGTTTTCGAAGATGTTAGAAATGAACACTGGTACAAGCCTCAGGTCTCGCTGTATGCTGATATTATTACAGTATTGGCTAGCAATGGATTGTTCGAACGAGTACAAATTATTCTTTCGTACATGAAAGCAGAGACTGATTTAGCACCTGAAATTGACGGGTTTAACGCTCTTTTGAAGGCATTGGTTGGTCATAATTTAGGTAAACTGGCGATGGAGTCGTATTATTTGATGAAGGAAGTAGGTTGTGAGCCAAATAAGGCTTCTTTCAGGATTGTAATAAAAGGATTGGAATTAAAGGGAGAGGCAGTTGATTTAAGAACTGTGAAACAGGATGCACAAAAGCTTTATGGTGAATCACTCGAGTTTTTGGAGGAAGCAGAAGAGGGAGCTACAGCCATATCTATACACTGA

Protein sequence

MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH

Homology

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BLAST of MELO3C015694 vs. NCBI nr
Match: XP_008451190.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g46870-like [Cucumis melo] >KAA0059596.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 481.1 bits (1237), Expect = 5.8e-132
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI 60
           MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI
Sbjct: 1   MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI 60

Query: 61  EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRN 120
           EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRN
Sbjct: 61  EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRN 120

Query: 121 EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLG 180
           EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLG
Sbjct: 121 EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLG 180

Query: 181 KLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAE 240
           KLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAE
Sbjct: 181 KLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAE 240

Query: 241 EGATAISIH 250
           EGATAISIH
Sbjct: 241 EGATAISIH 249

[Close]

BLAST of MELO3C015694 vs. NCBI nr
Match: TYK08129.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 479.6 bits (1233), Expect = 1.7e-131
Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 0


Query: 1   MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI 60
           MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI
Sbjct: 1   MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI 60

Query: 61  EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRN 120
           EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRN
Sbjct: 61  EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRN 120

Query: 121 EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLG 180
           EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLK LVGHNLG
Sbjct: 121 EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKVLVGHNLG 180

Query: 181 KLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAE 240
           KLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAE
Sbjct: 181 KLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAE 240

Query: 241 EGATAISIH 250
           EGATAISIH
Sbjct: 241 EGATAISIH 249

[Close]

BLAST of MELO3C015694 vs. NCBI nr
Match: XP_031744771.1 (protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucumis sativus] >KGN43371.1 hypothetical protein Csa_020464 [Cucumis sativus])

HSP 1 Score: 436.8 bits (1122), Expect = 1.3e-118
Identity = 229/248 (92.34%), Postives = 233/248 (93.95%), Query Frame = 0


Query: 1   MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI 60
           MSFL T  SPTI SP LK PSSV   CCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI
Sbjct: 1   MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI 60

Query: 61  EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRN 120
           EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVR 
Sbjct: 61  EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRK 120

Query: 121 EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLG 180
           EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAE DLAPEIDGFNALLKALV HNLG
Sbjct: 121 EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLG 180

Query: 181 KLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAE 240
           +LAMESYYLMK+VGCEP+KASFRIVIKGLE KGEAVDLRTVKQDAQ+LYGESLEFLEE E
Sbjct: 181 ELAMESYYLMKDVGCEPDKASFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEE 240

Query: 241 EGATAISI 249
           EGATA SI
Sbjct: 241 EGATATSI 248

[Close]

BLAST of MELO3C015694 vs. NCBI nr
Match: XP_038888189.1 (protein THYLAKOID ASSEMBLY 8, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 421.4 bits (1082), Expect = 5.4e-114
Identity = 222/249 (89.16%), Postives = 230/249 (92.37%), Query Frame = 0


Query: 1   MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI 60
           MSFL+  PSPTILSP  KL SS  +  CL LGRAEGY +VTMRGGSENRKPLQKGRNLSI
Sbjct: 1   MSFLIRPPSPTILSPSYKLLSSGGEASCLLLGRAEGYRKVTMRGGSENRKPLQKGRNLSI 60

Query: 61  EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRN 120
           EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDM+AVLRELLRQNECSLALKVFEDVRN
Sbjct: 61  EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMMAVLRELLRQNECSLALKVFEDVRN 120

Query: 121 EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLG 180
           EHWYKPQVSLYADII VLASNGLFERVQII SY+KAETDLAPEIDGFNALLKALV HNLG
Sbjct: 121 EHWYKPQVSLYADIIRVLASNGLFERVQIIHSYLKAETDLAPEIDGFNALLKALVSHNLG 180

Query: 181 KLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAE 240
           +LAMESYYLMKE+GCEP+KASFRIVIKGLE KGEAVDLRTVKQDAQKLYGESLEFLEE E
Sbjct: 181 ELAMESYYLMKEIGCEPDKASFRIVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEE 240

Query: 241 EGATAISIH 250
           E A AIS H
Sbjct: 241 EAAIAISTH 249

[Close]

BLAST of MELO3C015694 vs. NCBI nr
Match: XP_022952712.1 (protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita moschata])

HSP 1 Score: 390.2 bits (1001), Expect = 1.3e-104
Identity = 207/249 (83.13%), Postives = 220/249 (88.35%), Query Frame = 0


Query: 1   MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI 60
           MSFL T PS TILSPP  L  S  K   L+LGR EGY RVTMRGGSENRKPLQKGRNLSI
Sbjct: 1   MSFLATTPSSTILSPPYTLLGSGGKVSYLRLGRVEGYRRVTMRGGSENRKPLQKGRNLSI 60

Query: 61  EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRN 120
           EAIQAVQSLKR KKDLQQLDRVYDSKIRRLLKFDM+AVLRELLRQNECSLALKVFEDVR 
Sbjct: 61  EAIQAVQSLKRAKKDLQQLDRVYDSKIRRLLKFDMMAVLRELLRQNECSLALKVFEDVRK 120

Query: 121 EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLG 180
           E WYKPQVSLYADI++VLASNGLFE+VQII SY KAETDLAPEI+GFN LLKALV +NLG
Sbjct: 121 EDWYKPQVSLYADIVSVLASNGLFEQVQIIHSYFKAETDLAPEIEGFNNLLKALVSYNLG 180

Query: 181 KLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAE 240
           +LAMESYYLMKEVGCEP+K SFRIVIKGLE   E+VDLRTVK+DAQ+LYGESLEFLEE +
Sbjct: 181 ELAMESYYLMKEVGCEPDKTSFRIVIKGLESTRESVDLRTVKKDAQELYGESLEFLEEED 240

Query: 241 EGATAISIH 250
           E AT IS H
Sbjct: 241 EAATGISTH 249

[Close]

BLAST of MELO3C015694 vs. ExPASy Swiss-Prot
Match: Q9STF9 (Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THA8L PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.4e-19
Identity = 62/184 (33.70%), Postives = 102/184 (55.43%), Query Frame = 0


Query: 49  RKPLQKGRNL-SIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNE 108
           R PL +G+ L   EA+  +  LKR K+D ++LD+   + + RLLK DMLAV+ EL RQ E
Sbjct: 63  RGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQEE 122

Query: 109 CSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGF 168
            +LA+K+FE ++ + WY+P V +Y D+I  LA +   +    +   MK E +L P+   +
Sbjct: 123 TALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKE-NLFPDSQTY 182

Query: 169 NALLKALVGHNLGKLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQK 228
             +++  +       AM  Y  M +    P +  FR+++KG  L    +    VK+D ++
Sbjct: 183 TEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKG--LLPHPLLRNKVKKDFEE 242

Query: 229 LYGE 232
           L+ E
Sbjct: 243 LFPE 243

[Close]

BLAST of MELO3C015694 vs. ExPASy Swiss-Prot
Match: Q9LVW6 (Protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THA8 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.4e-16
Identity = 65/177 (36.72%), Postives = 96/177 (54.24%), Query Frame = 0


Query: 44  GGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELL 103
           G  +NR PL KGR LS EAIQ++QSLKR  +    L       +RRL+K D+++VLRELL
Sbjct: 34  GPRDNRGPLLKGRILSTEAIQSIQSLKRAHRTGVSLSLTL-RPLRRLIKSDLISVLRELL 93

Query: 104 RQNECSLALKVFEDVRNEHWYKP-QVSLYADIITVLASNGLFERVQIILSYMKAETDLAP 163
           RQ+ C+LA+ V   +R E  Y P  + LYADI+  L  N  F+ +  ++  +    D   
Sbjct: 94  RQDYCTLAVHVLSTLRTE--YPPLDLVLYADIVNALTRNKEFDEIDRLIGEIDG-IDQRS 153

Query: 164 EIDGFNALLKALVGHNLGKLAMESYYLMKEVG-----CEPNKASFRIVIKGLELKGE 215
           +      L++A+VG    +  +  Y LM+E G      E ++    ++ KGL   GE
Sbjct: 154 DDKALAKLIRAVVGAERRESVVRVYTLMRESGWGSESWEADEYVAEVLSKGLLRLGE 206

[Close]

BLAST of MELO3C015694 vs. ExPASy Swiss-Prot
Match: Q1PFH7 (Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana OX=3702 GN=At1g62350 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.9e-16
Identity = 52/152 (34.21%), Postives = 83/152 (54.61%), Query Frame = 0


Query: 58  LSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFED 117
           +S E + A + LKR +    +LDR   S + RLLK D+++VL E  RQN+  L +K++E 
Sbjct: 1   MSKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEV 60

Query: 118 VRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGH 177
           VR E WY+P +  Y D++ +LA N   +  + +   +K E  L  +   F  L++  + +
Sbjct: 61  VRREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQ-HTFGDLVRGFLDN 120

Query: 178 NLGKLAMESYYLMKEVGCEPNKASFRIVIKGL 210
            L   AM  Y  M+E    P    FR+++KGL
Sbjct: 121 ELPLEAMRLYGEMRESPDRPLSLPFRVILKGL 151

[Close]

BLAST of MELO3C015694 vs. ExPASy Swiss-Prot
Match: O82178 (Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX=3702 GN=At2g35130 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.7e-07
Identity = 32/119 (26.89%), Postives = 64/119 (53.78%), Query Frame = 0


Query: 110 LALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNA 169
           ++ K++ ++R+ H  KP +  Y  ++   A  GL E+ + I   ++ E  L P++  +NA
Sbjct: 282 MSWKLYCEMRS-HQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ-EDGLEPDVYVYNA 341

Query: 170 LLKALVGHNLGKLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKL 229
           L+++         A E + LM+ +GCEP++AS+ I++      G   D   V ++ ++L
Sbjct: 342 LMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRL 398

[Close]

BLAST of MELO3C015694 vs. ExPASy Swiss-Prot
Match: Q9SCP4 (Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX=3702 GN=At3g53170 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.8e-06
Identity = 38/149 (25.50%), Postives = 73/149 (48.99%), Query Frame = 0


Query: 60  IEAIQAVQSLKRTKKDLQQLDRVYDS-KIRRLLKFDMLAVLRELLRQNECSLALKVFEDV 119
           ++  + +  + RT   ++ ++R  +S K   L    +L  L E +++N    ALK+F  +
Sbjct: 25  VDPKKELSRILRTDAAVKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNLL 84

Query: 120 RNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHN 179
           R +HWY+P+   Y  +  VL +    ++  ++   M +E  L P ID + +L+       
Sbjct: 85  RKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSE-GLKPTIDVYTSLISVYGKSE 144

Query: 180 LGKLAMESYYLMKEVG-CEPNKASFRIVI 207
           L   A  +   MK V  C+P+  +F ++I
Sbjct: 145 LLDKAFSTLEYMKSVSDCKPDVFTFTVLI 172

[Close]

BLAST of MELO3C015694 vs. ExPASy TrEMBL
Match: A0A5A7UZI6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G00170 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 2.8e-132
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI 60
           MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI
Sbjct: 1   MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI 60

Query: 61  EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRN 120
           EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRN
Sbjct: 61  EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRN 120

Query: 121 EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLG 180
           EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLG
Sbjct: 121 EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLG 180

Query: 181 KLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAE 240
           KLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAE
Sbjct: 181 KLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAE 240

Query: 241 EGATAISIH 250
           EGATAISIH
Sbjct: 241 EGATAISIH 249

[Close]

BLAST of MELO3C015694 vs. ExPASy TrEMBL
Match: A0A1S3BRZ8 (pentatricopeptide repeat-containing protein At3g46870-like OS=Cucumis melo OX=3656 GN=LOC103492562 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 2.8e-132
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI 60
           MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI
Sbjct: 1   MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI 60

Query: 61  EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRN 120
           EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRN
Sbjct: 61  EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRN 120

Query: 121 EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLG 180
           EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLG
Sbjct: 121 EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLG 180

Query: 181 KLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAE 240
           KLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAE
Sbjct: 181 KLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAE 240

Query: 241 EGATAISIH 250
           EGATAISIH
Sbjct: 241 EGATAISIH 249

[Close]

BLAST of MELO3C015694 vs. ExPASy TrEMBL
Match: A0A5D3CCT4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00060 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 8.1e-132
Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 0


Query: 1   MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI 60
           MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI
Sbjct: 1   MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI 60

Query: 61  EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRN 120
           EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRN
Sbjct: 61  EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRN 120

Query: 121 EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLG 180
           EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLK LVGHNLG
Sbjct: 121 EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKVLVGHNLG 180

Query: 181 KLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAE 240
           KLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAE
Sbjct: 181 KLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAE 240

Query: 241 EGATAISIH 250
           EGATAISIH
Sbjct: 241 EGATAISIH 249

[Close]

BLAST of MELO3C015694 vs. ExPASy TrEMBL
Match: A0A0A0K6A9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G027870 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 6.1e-119
Identity = 229/248 (92.34%), Postives = 233/248 (93.95%), Query Frame = 0


Query: 1   MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI 60
           MSFL T  SPTI SP LK PSSV   CCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI
Sbjct: 1   MSFLATPSSPTIFSPLLKFPSSVGTACCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI 60

Query: 61  EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRN 120
           EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVR 
Sbjct: 61  EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRK 120

Query: 121 EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLG 180
           EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAE DLAPEIDGFNALLKALV HNLG
Sbjct: 121 EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAEADLAPEIDGFNALLKALVSHNLG 180

Query: 181 KLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAE 240
           +LAMESYYLMK+VGCEP+KASFRIVIKGLE KGEAVDLRTVKQDAQ+LYGESLEFLEE E
Sbjct: 181 ELAMESYYLMKDVGCEPDKASFRIVIKGLESKGEAVDLRTVKQDAQRLYGESLEFLEEEE 240

Query: 241 EGATAISI 249
           EGATA SI
Sbjct: 241 EGATATSI 248

[Close]

BLAST of MELO3C015694 vs. ExPASy TrEMBL
Match: A0A6J1HX85 (protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111468293 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 6.5e-105
Identity = 207/249 (83.13%), Postives = 221/249 (88.76%), Query Frame = 0


Query: 1   MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSI 60
           MSFL T PS TILSPP  L  S  K   L+LGR EGY RVTMRGGSENRKPLQKGRNLSI
Sbjct: 1   MSFLATTPSSTILSPPYTLLGSGGKVSYLRLGRVEGYRRVTMRGGSENRKPLQKGRNLSI 60

Query: 61  EAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRN 120
           EAIQAVQSLKR KKDLQQLDRVYDSKIRRLLKFDM+AVLRELLRQNECSLALKVFEDVR 
Sbjct: 61  EAIQAVQSLKRAKKDLQQLDRVYDSKIRRLLKFDMMAVLRELLRQNECSLALKVFEDVRK 120

Query: 121 EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLG 180
           E WYKPQVSLYADI++VLASNGLFE+VQII SY+KAETDLAPEI+GFN LLKALV +NLG
Sbjct: 121 EDWYKPQVSLYADIVSVLASNGLFEQVQIIHSYLKAETDLAPEIEGFNNLLKALVSYNLG 180

Query: 181 KLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAE 240
           +LAMESYYLMKEVGCEP+KASFRIVIKGLE   E+VDLR VK+DAQ+LYGESLEFLEE +
Sbjct: 181 ELAMESYYLMKEVGCEPDKASFRIVIKGLESTRESVDLRPVKKDAQELYGESLEFLEEED 240

Query: 241 EGATAISIH 250
           E AT IS H
Sbjct: 241 EAATGISTH 249

[Close]

BLAST of MELO3C015694 vs. TAIR 10
Match: AT5G09320.1 (Vacuolar sorting protein 9 (VPS9) domain )

HSP 1 Score: 224.2 bits (570), Expect = 1.2e-58
Identity = 123/224 (54.91%), Postives = 152/224 (67.86%), Query Frame = 0


Query: 40  VTMRGGSENRKPLQKGRNLSIEAIQAVQSLKR---------------TKKDLQQLDRVYD 99
           + MR  S+NRKPLQ+GR LSIEAIQAVQ+LKR               T      LDRV  
Sbjct: 487 IKMRDRSKNRKPLQRGRMLSIEAIQAVQALKRANPLLPPPPVPSTSTTSSSSALLDRVII 546

Query: 100 SKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLF 159
           SK RRLLKFDM+AVLRELLRQNECSLALKVFE++R E+WYKPQV +Y D+ITV+A N L 
Sbjct: 547 SKFRRLLKFDMVAVLRELLRQNECSLALKVFEEIRKEYWYKPQVRMYTDMITVMADNSLM 606

Query: 160 ERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKASFRI 219
           E V  + S MK+E  L  EI+ FN LL  L+ H L  L M+ Y  M+ +G EP++ASFR+
Sbjct: 607 EEVNYLYSAMKSEKGLMAEIEWFNTLLTILLNHKLFDLVMDCYAFMQSIGYEPDRASFRV 666

Query: 220 VIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISI 249
           ++ GLE  GE      V+QDA + YGESLEF+EE EE ++  S+
Sbjct: 667 LVLGLESNGEMGLSAIVRQDAHEYYGESLEFIEEDEEISSGTSV 710

[Close]

BLAST of MELO3C015694 vs. TAIR 10
Match: AT3G46870.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 97.4 bits (241), Expect = 1.7e-20
Identity = 62/184 (33.70%), Postives = 102/184 (55.43%), Query Frame = 0


Query: 49  RKPLQKGRNL-SIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNE 108
           R PL +G+ L   EA+  +  LKR K+D ++LD+   + + RLLK DMLAV+ EL RQ E
Sbjct: 63  RGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQEE 122

Query: 109 CSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGF 168
            +LA+K+FE ++ + WY+P V +Y D+I  LA +   +    +   MK E +L P+   +
Sbjct: 123 TALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKE-NLFPDSQTY 182

Query: 169 NALLKALVGHNLGKLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQK 228
             +++  +       AM  Y  M +    P +  FR+++KG  L    +    VK+D ++
Sbjct: 183 TEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKG--LLPHPLLRNKVKKDFEE 242

Query: 229 LYGE 232
           L+ E
Sbjct: 243 LFPE 243

[Close]

BLAST of MELO3C015694 vs. TAIR 10
Match: AT3G27750.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: Vacuolar sorting protein 9 (VPS9) domain (TAIR:AT5G09320.1); Has 106 Blast hits to 106 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 88.2 bits (217), Expect = 1.0e-17
Identity = 65/177 (36.72%), Postives = 96/177 (54.24%), Query Frame = 0


Query: 44  GGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELL 103
           G  +NR PL KGR LS EAIQ++QSLKR  +    L       +RRL+K D+++VLRELL
Sbjct: 34  GPRDNRGPLLKGRILSTEAIQSIQSLKRAHRTGVSLSLTL-RPLRRLIKSDLISVLRELL 93

Query: 104 RQNECSLALKVFEDVRNEHWYKP-QVSLYADIITVLASNGLFERVQIILSYMKAETDLAP 163
           RQ+ C+LA+ V   +R E  Y P  + LYADI+  L  N  F+ +  ++  +    D   
Sbjct: 94  RQDYCTLAVHVLSTLRTE--YPPLDLVLYADIVNALTRNKEFDEIDRLIGEIDG-IDQRS 153

Query: 164 EIDGFNALLKALVGHNLGKLAMESYYLMKEVG-----CEPNKASFRIVIKGLELKGE 215
           +      L++A+VG    +  +  Y LM+E G      E ++    ++ KGL   GE
Sbjct: 154 DDKALAKLIRAVVGAERRESVVRVYTLMRESGWGSESWEADEYVAEVLSKGLLRLGE 206

[Close]

BLAST of MELO3C015694 vs. TAIR 10
Match: AT1G62350.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-17
Identity = 52/152 (34.21%), Postives = 83/152 (54.61%), Query Frame = 0


Query: 58  LSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFED 117
           +S E + A + LKR +    +LDR   S + RLLK D+++VL E  RQN+  L +K++E 
Sbjct: 1   MSKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEV 60

Query: 118 VRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGH 177
           VR E WY+P +  Y D++ +LA N   +  + +   +K E  L  +   F  L++  + +
Sbjct: 61  VRREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQ-HTFGDLVRGFLDN 120

Query: 178 NLGKLAMESYYLMKEVGCEPNKASFRIVIKGL 210
            L   AM  Y  M+E    P    FR+++KGL
Sbjct: 121 ELPLEAMRLYGEMRESPDRPLSLPFRVILKGL 151

[Close]

BLAST of MELO3C015694 vs. TAIR 10
Match: AT2G35130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.9e-08
Identity = 32/119 (26.89%), Postives = 64/119 (53.78%), Query Frame = 0


Query: 110 LALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNA 169
           ++ K++ ++R+ H  KP +  Y  ++   A  GL E+ + I   ++ E  L P++  +NA
Sbjct: 282 MSWKLYCEMRS-HQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ-EDGLEPDVYVYNA 341

Query: 170 LLKALVGHNLGKLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKL 229
           L+++         A E + LM+ +GCEP++AS+ I++      G   D   V ++ ++L
Sbjct: 342 LMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRL 398

The following BLAST results are available for this feature:

BLAST of MELO3C015694 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451190.1	5.8e-132	100.00	PREDICTED: pentatricopeptide repeat-containing protein At3g46870-like [Cucumis m...	[more]
TYK08129.1	1.7e-131	99.60	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_031744771.1	1.3e-118	92.34	protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucumis sativus] >KGN43371.1 h...	[more]
XP_038888189.1	5.4e-114	89.16	protein THYLAKOID ASSEMBLY 8, chloroplastic-like [Benincasa hispida]	[more]
XP_022952712.1	1.3e-104	83.13	protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita moschata]	[more]

BLAST of MELO3C015694 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STF9	2.4e-19	33.70	Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q9LVW6	1.4e-16	36.72	Protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=T...	[more]
Q1PFH7	1.9e-16	34.21	Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana OX...	[more]
O82178	2.7e-07	26.89	Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX...	[more]
Q9SCP4	1.8e-06	25.50	Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX...	[more]

BLAST of MELO3C015694 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UZI6	2.8e-132	100.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BRZ8	2.8e-132	100.00	pentatricopeptide repeat-containing protein At3g46870-like OS=Cucumis melo OX=36...	[more]
A0A5D3CCT4	8.1e-132	99.60	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0K6A9	6.1e-119	92.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G027870 PE=4 SV=1	[more]
A0A6J1HX85	6.5e-105	83.13	protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of MELO3C015694 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09320.1	1.2e-58	54.91	Vacuolar sorting protein 9 (VPS9) domain	[more]
AT3G46870.1	1.7e-20	33.70	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G27750.1	1.0e-17	36.72	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G62350.1	1.3e-17	34.21	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G35130.1	1.9e-08	26.89	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 165..209 e-value: 1.1E-7 score: 31.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 57..229 e-value: 2.5E-43 score: 149.9
None	No IPR available	PANTHER	PTHR47594:SF4	THYLAKOID ASSEMBLY8	coord: 17..243
IPR044190	Protein THYLAKOID ASSEMBLY 8-like	PANTHER	PTHR47594	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 17..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C015694.1	MELO3C015694.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0000373	Group II intron splicing
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding