MELO3C015467 (gene) Melon (DHL92) v4

Overview
NameMELO3C015467
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionWD repeat containing protein
Locationchr02: 1917393 .. 1919602 (-)
RNA-Seq ExpressionMELO3C015467
SyntenyMELO3C015467
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAAAATGAGATAGAGAAGGAAGGGACCAAAGGAACATTGCTTGCTTGACGCGCACACAAGAAAACACAAAATACCGAGTCAGCGGCGGGCAACCCATTGCCCATTGCCACGAATTCAAACTTCAACTACTTTCAATGACGGCCTCACGAGAGCCACTCCCATCTTCATCTTCATCAACTTACTTACCTCCAAATGATTCACTACCTAAACGCTTCAAGGTCTTGTGGCGGATTCTATTGATTTCCAATTTCGCGCTTTCAGGTTCACCCTACTATCTCCTCCTTGTACGTTTTCCTTTTTCCTCGCATTCTGTGATGGGGTATTTTTCTTTAATCCGAATCTCGATCTTGAACTTCCCAGATCCTGAAACGACTCTTGGAAGTGAAAAAATGGAGTTTGTAATGAAAAGAATCTGTATGTTGAATGTTTTTGTTTTTGCACGCCAGGTGTTTGATGTAATGACTGTGATGGATTTCTTTGCTTAGTTGTAAAATATGTTGCTAGTTGCTGCTACTGCTATGATTAGTTTGTGGCATCTCTTTGTTTTTGTTGTCTGGATGATTCTTGCTTGGAAGAAAGTTGTTAATTTCACTATACTTCCAATGTATGGGATTTATAACCTGAGAGATAGAGGATTAGTAACATGCAAAAGTTGATATTAATAGAGAGAAATGTACGAGCACACGCAGGACTATTGAATTCGATATGTGCTGATCTTTGTGTTTGAATTCAAAAGATGAGATTGCTGAGAAAATGTGTCAATTTTCGTTGAATGGAGGACTCTCATGATGTGATATGCTATGGCTACTACAATATTGTTGCATATGCATAAAAGTTGGCTTAAACGAAATAGTAGGCTTAAACTTGTGGTTTTCTAACTAAAAAACCCGAATCAAAGAGAGAAAGAGTGCCTATTCTCTCTTGAAGTCACGCGATCTGGTTAGTCTATGAATTGGAAACTATCAGTTTGGGAACGTAGTTGCTATGTAAACCAGCAGAAAAGAAACGAAAAGATTCTTATCTCTCTTAGACCATCTCAAGTCAGATTCATAACCAATCTGAGAGTCGGGGAAGACACAATATTTCCTTTTTATTAGATCTGCCCAATTCTTACATATTATGCAAGATCTCTTTAAATTTCAAATAAATGGTGGGTTGACATTAACTTTAAGCAGGAGAAAGAGGAAGGTGTAATCTCTTCAATTTCTCATCTAAGTAAGGTTAAACTTTAGATGATTCCTTCCTTATTTTCTCGAATGGTTTGGATTAGTTGATAATTGGTTCATTGATGATGAGGTAATAACCAAGATCACCTATTCAATTTCCTTTCCAAGTGAGCTTACTAGTCTTAATCTGAAGTCTGGCTATATACTTTCTTGCGCTTCTCTCTGAATTGATCATAGTTCTCTTTTTTTCTTCATTACATTGTGCTCGAAACTAGAATACCAGTATGGGTGACATTTACTTCAGCCACATGCCATGCAGTTGAATTTACTTTATTGGTGTCAAACATTAGTTGTCAGAGTGAGCTTAGCTCGACAAAACTAGCATGAACTTTCTCCTTTGAGGAGGGCGGTTGTTTGATTTACCACCCCAATTTTTGTTATGCAATTAAGACATCTACTCCTTCCTACAAGACCTTTGAACCCCTTCTTTTCACCCAAAGTTTTTATACTGAAAAGAAAACATTAAACATCAGTTTGCAATTGATGTGTATTATTCCATGCATTGCAGCCTACATGTTTGCAAGTGCAAGGAAGAGACATTTTAATGAGCTGGAGAATGACCAGGTAGAAAAACAAAGTGATAGTGAAATTATTACAGAAATCCCTTCAACAATTATGGTGGATACGACTGGCATAGTTACTGAGAACGTGTTGGAAGATCAGCAGCAAGAACCAAACCAAGGGGTGGTTAGTGGTTGGAGAGAAAAGTTAGGTTTTAGTAGAAAAATGAATTGATAGTGAGATGTTGATTCTTTAAACAGTTCATTCTCTCATAACCGGTTAAAGCTCATTCAGGTAAATATGGTTGGTTGCTGCAGAATTTTCTTTAAGACTATTTTGTAGGTAAATGATTTATTGCGGTAGATTTGTTTGCTTGTAATATAATTCTAAGAATGTTAGCTCATATAATGTTCATTTTTTTTGTTGGTAAGTTTTATTATTATTATTTAAGAAGTCGAACTTCTGAGGCCGTTGATAATGA

mRNA sequence

AGAAAAATGAGATAGAGAAGGAAGGGACCAAAGGAACATTGCTTGCTTGACGCGCACACAAGAAAACACAAAATACCGAGTCAGCGGCGGGCAACCCATTGCCCATTGCCACGAATTCAAACTTCAACTACTTTCAATGACGGCCTCACGAGAGCCACTCCCATCTTCATCTTCATCAACTTACTTACCTCCAAATGATTCACTACCTAAACGCTTCAAGGTCTTGTGGCGGATTCTATTGATTTCCAATTTCGCGCTTTCAGCCTACATGTTTGCAAGTGCAAGGAAGAGACATTTTAATGAGCTGGAGAATGACCAGGTAGAAAAACAAAGTGATAGTGAAATTATTACAGAAATCCCTTCAACAATTATGGTGGATACGACTGGCATAGTTACTGAGAACGTGTTGGAAGATCAGCAGCAAGAACCAAACCAAGGGGTGGTTAGTGGTTGGAGAGAAAAGTTAGGTTTTAGTAGAAAAATGAATTGATAGTGAGATGTTGATTCTTTAAACAGTTCATTCTCTCATAACCGGTTAAAGCTCATTCAGGTAAATATGGTTGGTTGCTGCAGAATTTTCTTTAAGACTATTTTGTAGGTAAATGATTTATTGCGGTAGATTTGTTTGCTTGTAATATAATTCTAAGAATGTTAGCTCATATAATGTTCATTTTTTTTGTTGGTAAGTTTTATTATTATTATTTAAGAAGTCGAACTTCTGAGGCCGTTGATAATGA

Coding sequence (CDS)

ATGACGGCCTCACGAGAGCCACTCCCATCTTCATCTTCATCAACTTACTTACCTCCAAATGATTCACTACCTAAACGCTTCAAGGTCTTGTGGCGGATTCTATTGATTTCCAATTTCGCGCTTTCAGCCTACATGTTTGCAAGTGCAAGGAAGAGACATTTTAATGAGCTGGAGAATGACCAGGTAGAAAAACAAAGTGATAGTGAAATTATTACAGAAATCCCTTCAACAATTATGGTGGATACGACTGGCATAGTTACTGAGAACGTGTTGGAAGATCAGCAGCAAGAACCAAACCAAGGGGTGGTTAGTGGTTGGAGAGAAAAGTTAGGTTTTAGTAGAAAAATGAATTGA

Protein sequence

MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKMN
Homology
BLAST of MELO3C015467 vs. NCBI nr
Match: XP_008450851.1 (PREDICTED: uncharacterized protein LOC103492320 [Cucumis melo])

HSP 1 Score: 228.4 bits (581), Expect = 3.2e-56
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0

Query: 1   MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND 60
           MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND
Sbjct: 1   MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND 60

Query: 61  QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKMN 118
           QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKMN
Sbjct: 61  QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKMN 117

BLAST of MELO3C015467 vs. NCBI nr
Match: XP_004135711.1 (uncharacterized protein LOC101210247 isoform X1 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 9.6e-53
Identity = 110/117 (94.02%), Postives = 114/117 (97.44%), Query Frame = 0

Query: 1   MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND 60
           MT  R PLPSSSSSTYLPPNDSLPKRFKVLWR+LLISNFALSAYMFASARKRHFN+LEND
Sbjct: 1   MTDPRAPLPSSSSSTYLPPNDSLPKRFKVLWRVLLISNFALSAYMFASARKRHFNQLEND 60

Query: 61  QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKMN 118
           QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEP+QGVVSGWREKLGFSRK+N
Sbjct: 61  QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPDQGVVSGWREKLGFSRKVN 117

BLAST of MELO3C015467 vs. NCBI nr
Match: XP_011659979.1 (uncharacterized protein LOC101210247 isoform X2 [Cucumis sativus] >KGN66613.2 hypothetical protein Csa_007112 [Cucumis sativus])

HSP 1 Score: 142.5 bits (358), Expect = 2.3e-30
Identity = 71/74 (95.95%), Postives = 74/74 (100.00%), Query Frame = 0

Query: 44  YMFASARKRHFNELENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVV 103
           YMFASARKRHFN+LENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEP+QGVV
Sbjct: 21  YMFASARKRHFNQLENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPDQGVV 80

Query: 104 SGWREKLGFSRKMN 118
           SGWREKLGFSRK+N
Sbjct: 81  SGWREKLGFSRKVN 94

BLAST of MELO3C015467 vs. NCBI nr
Match: XP_023530326.1 (uncharacterized protein LOC111792930 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139.8 bits (351), Expect = 1.5e-29
Identity = 77/127 (60.63%), Postives = 91/127 (71.65%), Query Frame = 0

Query: 1   MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND 60
           M   R  L S SS   LPPND LP+RFKV+WR+LLISNFALSAYMFASARK+   ++END
Sbjct: 1   MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMEND 60

Query: 61  Q------------VEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWRE 116
           +            +EK SDSEI+ EIPST+MVDTTGIVTEN+ EDQ Q+P   +V GWRE
Sbjct: 61  EAEKDLGQLENDGIEKCSDSEIM-EIPSTLMVDTTGIVTENISEDQHQKPFHWIVDGWRE 120

BLAST of MELO3C015467 vs. NCBI nr
Match: KAG6588036.1 (hypothetical protein SDJN03_16601, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021933.1 hypothetical protein SDJN02_15661 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 139.0 bits (349), Expect = 2.5e-29
Identity = 77/127 (60.63%), Postives = 90/127 (70.87%), Query Frame = 0

Query: 1   MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND 60
           M   R  L S SS   LPPND LP+RFKV+WR+LLISNFALSAYMFASARK+   ++END
Sbjct: 1   MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMEND 60

Query: 61  Q------------VEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWRE 116
           +            +EK SDSEI+ EIPST MVDTTGIVTEN+ EDQ Q+P   +V GWRE
Sbjct: 61  EAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTENISEDQHQKPFHWIVDGWRE 120

BLAST of MELO3C015467 vs. ExPASy TrEMBL
Match: A0A1S3BR82 (uncharacterized protein LOC103492320 OS=Cucumis melo OX=3656 GN=LOC103492320 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.5e-56
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0

Query: 1   MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND 60
           MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND
Sbjct: 1   MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND 60

Query: 61  QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKMN 118
           QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKMN
Sbjct: 61  QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKMN 117

BLAST of MELO3C015467 vs. ExPASy TrEMBL
Match: A0A0A0M1X9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G587470 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.6e-53
Identity = 110/117 (94.02%), Postives = 114/117 (97.44%), Query Frame = 0

Query: 1   MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND 60
           MT  R PLPSSSSSTYLPPNDSLPKRFKVLWR+LLISNFALSAYMFASARKRHFN+LEND
Sbjct: 1   MTDPRAPLPSSSSSTYLPPNDSLPKRFKVLWRVLLISNFALSAYMFASARKRHFNQLEND 60

Query: 61  QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKMN 118
           QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEP+QGVVSGWREKLGFSRK+N
Sbjct: 61  QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPDQGVVSGWREKLGFSRKVN 117

BLAST of MELO3C015467 vs. ExPASy TrEMBL
Match: A0A6J1HYA0 (uncharacterized protein LOC111467730 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467730 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.7e-29
Identity = 78/127 (61.42%), Postives = 89/127 (70.08%), Query Frame = 0

Query: 1   MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARK--------- 60
           M   R  L S SS   LPPND LP+RFKV+WR+LLISNFALSAYMFASARK         
Sbjct: 1   MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESD 60

Query: 61  ---RHFNELENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWRE 116
              +   +LEND +EK SDSEI+ EIPST MVDTTGIVTEN+ EDQ Q+P   +V GWRE
Sbjct: 61  EAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTENIPEDQHQKPFHWIVDGWRE 120

BLAST of MELO3C015467 vs. ExPASy TrEMBL
Match: A0A6J1EIP0 (uncharacterized protein LOC111433716 OS=Cucurbita moschata OX=3662 GN=LOC111433716 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 3.0e-28
Identity = 77/127 (60.63%), Postives = 88/127 (69.29%), Query Frame = 0

Query: 1   MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARK--------- 60
           M   R  L S SS   L PND LP+RFKV+WR+LLISNFALSAYMFASARK         
Sbjct: 1   MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENN 60

Query: 61  ---RHFNELENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWRE 116
              +   +LEND +EK SDSEI+ EIPST MVDTTGIVTEN+ EDQ Q+P   +V GWRE
Sbjct: 61  EAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTENISEDQHQKPFHWIVDGWRE 120

BLAST of MELO3C015467 vs. ExPASy TrEMBL
Match: A0A6J1D315 (uncharacterized protein LOC111016544 OS=Momordica charantia OX=3673 GN=LOC111016544 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 3.7e-26
Identity = 66/101 (65.35%), Postives = 78/101 (77.23%), Query Frame = 0

Query: 1   MTASREPLPSSSS-STYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEN 60
           MT  R PLPSSSS    LPPND LP+RFKV+WR+LLISNFAL+AYMFA+ARK+    +E 
Sbjct: 1   MTDPRAPLPSSSSPPPPLPPNDLLPRRFKVIWRVLLISNFALAAYMFANARKKDLGRMEK 60

Query: 61  DQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQ 101
           D VEK SD E++T IPST+MVDTT I  EN+ ED Q+EP Q
Sbjct: 61  DPVEKHSDGEVMTNIPSTLMVDTTAIAAENISEDHQREPFQ 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008450851.13.2e-56100.00PREDICTED: uncharacterized protein LOC103492320 [Cucumis melo][more]
XP_004135711.19.6e-5394.02uncharacterized protein LOC101210247 isoform X1 [Cucumis sativus][more]
XP_011659979.12.3e-3095.95uncharacterized protein LOC101210247 isoform X2 [Cucumis sativus] >KGN66613.2 hy... [more]
XP_023530326.11.5e-2960.63uncharacterized protein LOC111792930 [Cucurbita pepo subsp. pepo][more]
KAG6588036.12.5e-2960.63hypothetical protein SDJN03_16601, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3BR821.5e-56100.00uncharacterized protein LOC103492320 OS=Cucumis melo OX=3656 GN=LOC103492320 PE=... [more]
A0A0A0M1X94.6e-5394.02Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G587470 PE=4 SV=1[more]
A0A6J1HYA02.7e-2961.42uncharacterized protein LOC111467730 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1EIP03.0e-2860.63uncharacterized protein LOC111433716 OS=Cucurbita moschata OX=3662 GN=LOC1114337... [more]
A0A6J1D3153.7e-2665.35uncharacterized protein LOC111016544 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C015467.1MELO3C015467.1mRNA