MELO3C015461.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C015461.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionPrenylated rab acceptor PRA1
Locationchr02: 2059281 .. 2060949 (-)
RNA-Seq ExpressionMELO3C015461.jh1
SyntenyMELO3C015461.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAGAAAGCTGATCCATTTCTCATCCTTCATTGGGCTTTCTTTTTTTCTCCCTTCTCCTCTTAACAAACCTTTCCATTGCTGATTCCTCCGCCGCCTCCGCCACTGAAGACAGTAACCGCCAATTCTTCAACTGTTTCCGTTTTCCTTTAAATATCATTTTATTCGAACGATTCAATCGCCAATTGCGCCAAAATGGCGAGTTATTTATGGAGGAAGTACGCCGATTATCTCTACACCAAATGGGAAAAAACGCTTCTCTGGGATATGATCGATCCCTATAGACGACCTAAATCCTTTACGCCTTTGGTTTCCATATATATTGCTGCTTTTTACACTGGTGTCGTCGGCGCTGCCATTACCGAGCAACTCTATAAGGTCGTTTCTTTGTTGTTTCGTTTCTGTTCCTTCTCGTTCTATTTGTTGTTTAACTTGAGCATGTTTATGTAATTGAAGTTTTTTTTTTTTTATTCTGTTTGATTGATGAATTGAGCGGATTCAAATAGAAGAAAGATTGGTTGTTTTTCATATTTTGTTCACTTCTTTAATTTGTGACAGAATAATGCCCCCAATTAGAAGAATTTTAAGTTAAGTATTAAAATCCCAAAACGAGCTTAGTTGAACATCAATCGACATATTTTCACTCGATTGAGGTTGGAGGTTCATCTCAAAAATGGGTTAAGTTGCAAATTTGGTTTTCATGGTTCAAAAGAAAGTTGGAATATAAATTTTGAGGTTTTATCAAACCATAAAGACTAAATTCTAACTTTACTATAGGAACTAAACTCTAATTTTCTCCACAAACCATAGGGAGCAAATTTGTAATTTAACTTTAAAAAAATGTTTAAAACATTGAAAACGAAAAGGATTGGTACTAAATTAGAGACGGAGTTACGGTATAATAGTAAAGTTTATAGATATGAGGAGGGGTTGTGAGAGGTGCTTAGGCTTAATGGTTTGTTATGGCTCATGTGGTTAAGATTCTCTCTCTCTCTCTCTCTCTTAATTATTATTTTGTTTAATTTTTTAAATGTTGTTCTTCCTTGTAGTTCATTGGACTCCTCTTTTCGTGGGACTATTCTATTTTGTATTTTCTTTAATTTATTAAGAATGTATATTTGATTTTTGAAGCTTGGTTTCTTATCAAAAAAAAAAAGAAAATGAAATATTGTTTGAACCATGTCTTATCACCATTTTAGGAAGATAAAGGCACTTTGAAACATGTCTTATGATCATTTAACATCAATTTAATGTTGGATTTTACATTAGTCTTGATTTCGAATGATTTAAAATACATTTTAGATTGATTTTGAAACATGAAAATAGTGATTTTTGCAATTCAAATCACTTCCAAACATTCCCTAAAGCAACATTTGTGCTACCTATATCAACCGAATCCTTGCTAAAATGTGCAGGAAAAGTATTGGGAAGATCATCCCGGGGAAGCTGTTCCATTAATGAAACCAAAATTTTATACTGGACCTTGGAGGGTAATGAGAGGAGAAGTCCCTGCACACACGAAGTGAAAGCTTTAGCACTCGCCCTTCTCTTCCATGATGATACTGGAAACATATTGTAGAAAGTTAATGACCGAGCATTTGCTGTTTGCTCAAGAAATTGGTACGATTATCAATAATAATTCATATTTCTTGTTTTCATTGTTGAATCT

mRNA sequence

AAGAAGAAAGCTGATCCATTTCTCATCCTTCATTGGGCTTTCTTTTTTTCTCCCTTCTCCTCTTAACAAACCTTTCCATTGCTGATTCCTCCGCCGCCTCCGCCACTGAAGACAGTAACCGCCAATTCTTCAACTGTTTCCGTTTTCCTTTAAATATCATTTTATTCGAACGATTCAATCGCCAATTGCGCCAAAATGGCGAGTTATTTATGGAGGAAGTACGCCGATTATCTCTACACCAAATGGGAAAAAACGCTTCTCTGGGATATGATCGATCCCTATAGACGACCTAAATCCTTTACGCCTTTGGTTTCCATATATATTGCTGCTTTTTACACTGGTGTCGTCGGCGCTGCCATTACCGAGCAACTCTATAAGGAAAAGTATTGGGAAGATCATCCCGGGGAAGCTGTTCCATTAATGAAACCAAAATTTTATACTGGACCTTGGAGGGTAATGAGAGGAGAAGTCCCTGCACACACGAAGTGAAAGCTTTAGCACTCGCCCTTCTCTTCCATGATGATACTGGAAACATATTGTAGAAAGTTAATGACCGAGCATTTGCTGTTTGCTCAAGAAATTGGTACGATTATCAATAATAATTCATATTTCTTGTTTTCATTGTTGAATCT

Coding sequence (CDS)

ATGGCGAGTTATTTATGGAGGAAGTACGCCGATTATCTCTACACCAAATGGGAAAAAACGCTTCTCTGGGATATGATCGATCCCTATAGACGACCTAAATCCTTTACGCCTTTGGTTTCCATATATATTGCTGCTTTTTACACTGGTGTCGTCGGCGCTGCCATTACCGAGCAACTCTATAAGGAAAAGTATTGGGAAGATCATCCCGGGGAAGCTGTTCCATTAATGAAACCAAAATTTTATACTGGACCTTGGAGGGTAATGAGAGGAGAAGTCCCTGCACACACGAAGTGA

Protein sequence

MASYLWRKYADYLYTKWEKTLLWDMIDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK
Homology
[Close]
BLAST of MELO3C015461.jh1 vs. NCBI nr
Match: XP_008450847.1 (PREDICTED: uncharacterized protein At4g29660 [Cucumis melo])

HSP 1 Score: 211 bits (538), Expect = 3.05e-69
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MASYLWRKYADYLYTKWEKTLLWDMIDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY 60
          MASYLWRKYADYLYTKWEKTLLWDMIDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY
Sbjct: 1  MASYLWRKYADYLYTKWEKTLLWDMIDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY 60

Query: 61 KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK 97
          KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK
Sbjct: 61 KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK 97

[Close]
BLAST of MELO3C015461.jh1 vs. NCBI nr
Match: XP_004135707.1 (uncharacterized protein At4g29660 [Cucumis sativus] >KGN66231.1 hypothetical protein Csa_007483 [Cucumis sativus])

HSP 1 Score: 209 bits (533), Expect = 1.77e-68
Identity = 95/97 (97.94%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MASYLWRKYADYLYTKWEKTLLWDMIDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY 60
          MASYLWRKYADYL+TKWEKTLLWDM+DPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY
Sbjct: 1  MASYLWRKYADYLFTKWEKTLLWDMVDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY 60

Query: 61 KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK 97
          KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK
Sbjct: 61 KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK 97

[Close]
BLAST of MELO3C015461.jh1 vs. NCBI nr
Match: XP_038878275.1 (uncharacterized protein At4g29660 [Benincasa hispida])

HSP 1 Score: 205 bits (522), Expect = 8.43e-67
Identity = 92/97 (94.85%), Postives = 96/97 (98.97%), Query Frame = 0 

Query: 1  MASYLWRKYADYLYTKWEKTLLWDMIDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY 60
          MASYLWRKYADY+YTKWE+T+LWDM+DPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY
Sbjct: 1  MASYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY 60

Query: 61 KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK 97
          KEKYWEDHPGEAVPLMKPKFY GPWRVMRGEVPAHTK
Sbjct: 61 KEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK 97

[Close]
BLAST of MELO3C015461.jh1 vs. NCBI nr
Match: XP_022147559.1 (uncharacterized protein At4g29660 [Momordica charantia])

HSP 1 Score: 204 bits (518), Expect = 3.44e-66
Identity = 91/97 (93.81%), Postives = 96/97 (98.97%), Query Frame = 0 

Query: 1  MASYLWRKYADYLYTKWEKTLLWDMIDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY 60
          MASYLWRKYADY+YTKWE+T+LWDM+DPYRRPKSFTPLVSIYIAAFY+GVVGAAITEQLY
Sbjct: 1  MASYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFYSGVVGAAITEQLY 60

Query: 61 KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK 97
          KEKYWEDHPGEAVPLMKPKFY GPWRVMRGEVPAHTK
Sbjct: 61 KEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK 97

[Close]
BLAST of MELO3C015461.jh1 vs. NCBI nr
Match: XP_022961093.1 (uncharacterized protein At4g29660 [Cucurbita moschata] >XP_022987918.1 uncharacterized protein At4g29660 [Cucurbita maxima] >XP_023516486.1 uncharacterized protein At4g29660 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203 bits (516), Expect = 6.94e-66
Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 0 

Query: 1  MASYLWRKYADYLYTKWEKTLLWDMIDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY 60
          MASYLWRKYADYLYTKWE+T+LWDM+DPYRRPKSFTPLV+IYIAAFYTGVVGAAITEQLY
Sbjct: 1  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLY 60

Query: 61 KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK 97
          KEKYWEDHPGE VPLMKPKFY GPWRVMRGEVPAHTK
Sbjct: 61 KEKYWEDHPGEDVPLMKPKFYYGPWRVMRGEVPAHTK 97

[Close]
BLAST of MELO3C015461.jh1 vs. ExPASy Swiss-Prot
Match: Q94K18 (Uncharacterized protein At4g29660 OS=Arabidopsis thaliana OX=3702 GN=EMB2752 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.8e-37
Identity = 66/92 (71.74%), Postives = 80/92 (86.96%), Query Frame = 0 

Query: 3  SYLWRKYADYLYTKWEKTLLWDMIDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLYKE 62
          S LWRKYADY Y K+E+  +W+MI+PYRRPK+FT L++IY+AAFYTGV+GAA+TEQLYKE
Sbjct: 6  SQLWRKYADYKYNKFERFAVWEMIEPYRRPKTFTTLITIYVAAFYTGVIGAAVTEQLYKE 65

Query: 63 KYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPA 95
          K+WE+HPG+ VPLMKP FY GPWRV RGE  A
Sbjct: 66 KFWEEHPGKTVPLMKPVFYRGPWRVYRGEAIA 97

[Close]
BLAST of MELO3C015461.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BPK6 (uncharacterized protein At4g29660 OS=Cucumis melo OX=3656 GN=LOC103492316 PE=4 SV=1)

HSP 1 Score: 211 bits (538), Expect = 1.47e-69
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MASYLWRKYADYLYTKWEKTLLWDMIDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY 60
          MASYLWRKYADYLYTKWEKTLLWDMIDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY
Sbjct: 1  MASYLWRKYADYLYTKWEKTLLWDMIDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY 60

Query: 61 KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK 97
          KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK
Sbjct: 61 KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK 97

[Close]
BLAST of MELO3C015461.jh1 vs. ExPASy TrEMBL
Match: A0A0A0M1X3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G587420 PE=4 SV=1)

HSP 1 Score: 209 bits (533), Expect = 8.55e-69
Identity = 95/97 (97.94%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MASYLWRKYADYLYTKWEKTLLWDMIDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY 60
          MASYLWRKYADYL+TKWEKTLLWDM+DPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY
Sbjct: 1  MASYLWRKYADYLFTKWEKTLLWDMVDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY 60

Query: 61 KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK 97
          KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK
Sbjct: 61 KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK 97

[Close]
BLAST of MELO3C015461.jh1 vs. ExPASy TrEMBL
Match: A0A6J1D1D0 (uncharacterized protein At4g29660 OS=Momordica charantia OX=3673 GN=LOC111016456 PE=4 SV=1)

HSP 1 Score: 204 bits (518), Expect = 1.66e-66
Identity = 91/97 (93.81%), Postives = 96/97 (98.97%), Query Frame = 0 

Query: 1  MASYLWRKYADYLYTKWEKTLLWDMIDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY 60
          MASYLWRKYADY+YTKWE+T+LWDM+DPYRRPKSFTPLVSIYIAAFY+GVVGAAITEQLY
Sbjct: 1  MASYLWRKYADYVYTKWERTILWDMVDPYRRPKSFTPLVSIYIAAFYSGVVGAAITEQLY 60

Query: 61 KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK 97
          KEKYWEDHPGEAVPLMKPKFY GPWRVMRGEVPAHTK
Sbjct: 61 KEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK 97

[Close]
BLAST of MELO3C015461.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JKR6 (uncharacterized protein At4g29660 OS=Cucurbita maxima OX=3661 GN=LOC111485319 PE=4 SV=1)

HSP 1 Score: 203 bits (516), Expect = 3.36e-66
Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 0 

Query: 1  MASYLWRKYADYLYTKWEKTLLWDMIDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY 60
          MASYLWRKYADYLYTKWE+T+LWDM+DPYRRPKSFTPLV+IYIAAFYTGVVGAAITEQLY
Sbjct: 1  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLY 60

Query: 61 KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK 97
          KEKYWEDHPGE VPLMKPKFY GPWRVMRGEVPAHTK
Sbjct: 61 KEKYWEDHPGEDVPLMKPKFYYGPWRVMRGEVPAHTK 97

[Close]
BLAST of MELO3C015461.jh1 vs. ExPASy TrEMBL
Match: A0A6J1HAW0 (uncharacterized protein At4g29660 OS=Cucurbita moschata OX=3662 GN=LOC111461707 PE=4 SV=1)

HSP 1 Score: 203 bits (516), Expect = 3.36e-66
Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 0 

Query: 1  MASYLWRKYADYLYTKWEKTLLWDMIDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLY 60
          MASYLWRKYADYLYTKWE+T+LWDM+DPYRRPKSFTPLV+IYIAAFYTGVVGAAITEQLY
Sbjct: 1  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLY 60

Query: 61 KEKYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPAHTK 97
          KEKYWEDHPGE VPLMKPKFY GPWRVMRGEVPAHTK
Sbjct: 61 KEKYWEDHPGEDVPLMKPKFYYGPWRVMRGEVPAHTK 97

[Close]
BLAST of MELO3C015461.jh1 vs. TAIR 10
Match: AT4G29660.1 (embryo defective 2752 )

HSP 1 Score: 155.6 bits (392), Expect = 2.0e-38
Identity = 66/92 (71.74%), Postives = 80/92 (86.96%), Query Frame = 0 

Query: 3  SYLWRKYADYLYTKWEKTLLWDMIDPYRRPKSFTPLVSIYIAAFYTGVVGAAITEQLYKE 62
          S LWRKYADY Y K+E+  +W+MI+PYRRPK+FT L++IY+AAFYTGV+GAA+TEQLYKE
Sbjct: 6  SQLWRKYADYKYNKFERFAVWEMIEPYRRPKTFTTLITIYVAAFYTGVIGAAVTEQLYKE 65

Query: 63 KYWEDHPGEAVPLMKPKFYTGPWRVMRGEVPA 95
          K+WE+HPG+ VPLMKP FY GPWRV RGE  A
Sbjct: 66 KFWEEHPGKTVPLMKPVFYRGPWRVYRGEAIA 97

The following BLAST results are available for this feature:
BLAST of MELO3C015461.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008450847.13.05e-69100.00PREDICTED: uncharacterized protein At4g29660 [Cucumis melo][more]
XP_004135707.11.77e-6897.94uncharacterized protein At4g29660 [Cucumis sativus] >KGN66231.1 hypothetical pro... [more]
XP_038878275.18.43e-6794.85uncharacterized protein At4g29660 [Benincasa hispida][more]
XP_022147559.13.44e-6693.81uncharacterized protein At4g29660 [Momordica charantia][more]
XP_022961093.16.94e-6693.81uncharacterized protein At4g29660 [Cucurbita moschata] >XP_022987918.1 uncharact... [more]
BLAST of MELO3C015461.jh1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94K182.8e-3771.74Uncharacterized protein At4g29660 OS=Arabidopsis thaliana OX=3702 GN=EMB2752 PE=... [more]
BLAST of MELO3C015461.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BPK61.47e-69100.00uncharacterized protein At4g29660 OS=Cucumis melo OX=3656 GN=LOC103492316 PE=4 S... [more]
A0A0A0M1X38.55e-6997.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G587420 PE=4 SV=1[more]
A0A6J1D1D01.66e-6693.81uncharacterized protein At4g29660 OS=Momordica charantia OX=3673 GN=LOC111016456... [more]
A0A6J1JKR63.36e-6693.81uncharacterized protein At4g29660 OS=Cucurbita maxima OX=3661 GN=LOC111485319 PE... [more]
A0A6J1HAW03.36e-6693.81uncharacterized protein At4g29660 OS=Cucurbita moschata OX=3662 GN=LOC111461707 ... [more]
BLAST of MELO3C015461.jh1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G29660.12.0e-3871.74embryo defective 2752 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037759Uncharacterized protein At4g29660-likePANTHERPTHR37898OS05G0540200 PROTEINcoord: 1..95

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C015461.jh1.t1MELO3C015461.jh1.t1mRNA