Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGATAAAGAAGAGCTTGCTAGTACTCTTTATGGAGGAAGTAACTATTGGCCATATCGAATGAAGTTGACAACCGATCAGTTACGTTGGGATAGCCTCAAGATTTCGGAATCAAAGGAATTCGAGGAACTGCTTTCAAAGAACATGAATGAAGGAAGCTATAGAGATTTGGCTGAGATGATCCCTATTGAAGTATCAATCTATGATGTTGATATCTGTGAAACTTTTAGGGTGAAGTTGGTGAAGAAAGAGGCATTTTGGTTTGAACCATTGCCTCTAGTTGGTGAGAAGTCAAAGAAGGATAAGTTTGGTTCTCATTCCACTGCAAAATTGAATGGCAAGTCCTACAAGGAAAAGAAAGAGTTTGTTTATTCGATCGAGCCTTTTCGCCACATTATAAAGAAGCGGGGCCTAGATTATCAACAAGAGATTGGTTTGCGTTGGTCGGGTAGCAAAGCGATGGATCGGTTTGACTTTTCAGTTTTATCTTCTCCAAGGTTGAGCTTAAACAACTTGATGATCTAA
mRNA sequence
ATGAAGGATAAAGAAGAGCTTGCTAGTACTCTTTATGGAGGAAGTAACTATTGGCCATATCGAATGAAGTTGACAACCGATCAGTTACGTTGGGATAGCCTCAAGATTTCGGAATCAAAGGAATTCGAGGAACTGCTTTCAAAGAACATGAATGAAGGAAGCTATAGAGATTTGGCTGAGATGATCCCTATTGAAGTATCAATCTATGATGTTGATATCTGTGAAACTTTTAGGGTGAAGTTGGTGAAGAAAGAGGCATTTTGGTTTGAACCATTGCCTCTAGTTGGTGAGAAGTCAAAGAAGGATAAGTTTGGTTCTCATTCCACTGCAAAATTGAATGGCAAGTCCTACAAGGAAAAGAAAGAGTTTGTTTATTCGATCGAGCCTTTTCGCCACATTATAAAGAAGCGGGGCCTAGATTATCAACAAGAGATTGGTTTGCGTTGGTCGGGTAGCAAAGCGATGGATCGGTTTGACTTTTCAGTTTTATCTTCTCCAAGGTTGAGCTTAAACAACTTGATGATCTAA
Coding sequence (CDS)
ATGAAGGATAAAGAAGAGCTTGCTAGTACTCTTTATGGAGGAAGTAACTATTGGCCATATCGAATGAAGTTGACAACCGATCAGTTACGTTGGGATAGCCTCAAGATTTCGGAATCAAAGGAATTCGAGGAACTGCTTTCAAAGAACATGAATGAAGGAAGCTATAGAGATTTGGCTGAGATGATCCCTATTGAAGTATCAATCTATGATGTTGATATCTGTGAAACTTTTAGGGTGAAGTTGGTGAAGAAAGAGGCATTTTGGTTTGAACCATTGCCTCTAGTTGGTGAGAAGTCAAAGAAGGATAAGTTTGGTTCTCATTCCACTGCAAAATTGAATGGCAAGTCCTACAAGGAAAAGAAAGAGTTTGTTTATTCGATCGAGCCTTTTCGCCACATTATAAAGAAGCGGGGCCTAGATTATCAACAAGAGATTGGTTTGCGTTGGTCGGGTAGCAAAGCGATGGATCGGTTTGACTTTTCAGTTTTATCTTCTCCAAGGTTGAGCTTAAACAACTTGATGATCTAA
Protein sequence
MKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSLKISESKEFEELLSKNMNEGSYRDLAEMIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPLVGEKSKKDKFGSHSTAKLNGKSYKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKAMDRFDFSVLSSPRLSLNNLMI
Homology
BLAST of MELO3C015330 vs. NCBI nr
Match:
TYK10230.1 (root phototropism protein 3-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 353.6 bits (906), Expect = 9.8e-94
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
Query: 1 MKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSLKISESKEFEELLSKNMNEGSYRDLAE 60
MKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSLKISESKEFEELLSKNMNEGSYRDLAE
Sbjct: 582 MKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSLKISESKEFEELLSKNMNEGSYRDLAE 641
Query: 61 MIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPLVGEKSKKDKFGSHSTAKLNGKSYKEK 120
MIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPLVGEKSKKDKFGSHSTAKLNGKSYKEK
Sbjct: 642 MIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPLVGEKSKKDKFGSHSTAKLNGKSYKEK 701
Query: 121 KEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKAMDRFDFSVLSSPRLSLNNLMI 176
KEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKAMDRFDFSVLSSPRLSLNNLMI
Sbjct: 702 KEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKAMDRFDFSVLSSPRLSLNNLMI 756
BLAST of MELO3C015330 vs. NCBI nr
Match:
KAA0050878.1 (root phototropism protein 3-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 352.4 bits (903), Expect = 2.2e-93
Identity = 174/175 (99.43%), Postives = 175/175 (100.00%), Query Frame = 0
Query: 1 MKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSLKISESKEFEELLSKNMNEGSYRDLAE 60
MKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSLKISESK+FEELLSKNMNEGSYRDLAE
Sbjct: 582 MKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSLKISESKQFEELLSKNMNEGSYRDLAE 641
Query: 61 MIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPLVGEKSKKDKFGSHSTAKLNGKSYKEK 120
MIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPLVGEKSKKDKFGSHSTAKLNGKSYKEK
Sbjct: 642 MIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPLVGEKSKKDKFGSHSTAKLNGKSYKEK 701
Query: 121 KEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKAMDRFDFSVLSSPRLSLNNLMI 176
KEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKAMDRFDFSVLSSPRLSLNNLMI
Sbjct: 702 KEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKAMDRFDFSVLSSPRLSLNNLMI 756
BLAST of MELO3C015330 vs. NCBI nr
Match:
KGN66088.1 (hypothetical protein Csa_007428 [Cucumis sativus])
HSP 1 Score: 334.0 bits (855), Expect = 8.0e-88
Identity = 164/175 (93.71%), Postives = 170/175 (97.14%), Query Frame = 0
Query: 1 MKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSLKISESKEFEELLSKNMNEGSYRDLAE 60
MKDKEELAST+YGGSNYWPYRMKLTTDQLRWDSLKISE KEFEELLSKNMNEGSYRDLAE
Sbjct: 16 MKDKEELASTIYGGSNYWPYRMKLTTDQLRWDSLKISEPKEFEELLSKNMNEGSYRDLAE 75
Query: 61 MIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPLVGEKSKKDKFGSHSTAKLNGKSYKEK 120
MIPIEVSIYDVDICETF+VKLVKKEAFWFEPLPLVGEKSKKDK SH+TAK +GKS+KEK
Sbjct: 76 MIPIEVSIYDVDICETFKVKLVKKEAFWFEPLPLVGEKSKKDKLCSHATAKSSGKSHKEK 135
Query: 121 KEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKAMDRFDFSVLSSPRLSLNNLMI 176
KEFVYSIEPFRHIIKKRGLDYQQEIG RWSGSK+MDRFDFSVLSSPRLSLNNLMI
Sbjct: 136 KEFVYSIEPFRHIIKKRGLDYQQEIGFRWSGSKSMDRFDFSVLSSPRLSLNNLMI 190
BLAST of MELO3C015330 vs. NCBI nr
Match:
KAG6590385.1 (hypothetical protein SDJN03_15808, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 260.0 bits (663), Expect = 1.5e-65
Identity = 128/174 (73.56%), Postives = 143/174 (82.18%), Query Frame = 0
Query: 1 MKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSLKISESKEFEELLSKNMNEGSYRDLAE 60
MKDKEEL S +YGG NYWPYRMKL+TD+LRWDSLKISE EFEE++ +NMNEGSYRDL E
Sbjct: 150 MKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNE 209
Query: 61 MIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPLVGEKSKKDKFGSHSTAKLNGKSYKEK 120
MIPIE+SI+DVDICET++VKLVKKEAFWFEPLPLVGEKS K K +
Sbjct: 210 MIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSSK----------------KYQ 269
Query: 121 KEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKAMDRFDFSVLSSPRLSLNNLM 175
FVYSIEPFRHI+KKRGLDY QEIGLRWSGSK +DRFDFSVLSS RLS+ NL+
Sbjct: 270 SSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSVLSSSRLSVYNLI 307
BLAST of MELO3C015330 vs. NCBI nr
Match:
XP_022961362.1 (uncharacterized protein LOC111461952 [Cucurbita moschata])
HSP 1 Score: 259.6 bits (662), Expect = 1.9e-65
Identity = 127/174 (72.99%), Postives = 143/174 (82.18%), Query Frame = 0
Query: 1 MKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSLKISESKEFEELLSKNMNEGSYRDLAE 60
MKDKEEL S +YGG NYWPYRMKL+TD+LRWDSLKISE EFEE++ +NMNEGSYRDL E
Sbjct: 82 MKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNE 141
Query: 61 MIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPLVGEKSKKDKFGSHSTAKLNGKSYKEK 120
MIPIE+SI+DVDICET++VKLVKKEAFWFEPLPLVGEKS K K +
Sbjct: 142 MIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSSK----------------KYQ 201
Query: 121 KEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKAMDRFDFSVLSSPRLSLNNLM 175
FVYSIEPFRHI+KKRGLDY QEIGLRWSGSK +DRFDFS+LSS RLS+ NL+
Sbjct: 202 SSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI 239
BLAST of MELO3C015330 vs. ExPASy TrEMBL
Match:
A0A5D3CFT9 (Root phototropism protein 3-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003770 PE=3 SV=1)
HSP 1 Score: 353.6 bits (906), Expect = 4.7e-94
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
Query: 1 MKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSLKISESKEFEELLSKNMNEGSYRDLAE 60
MKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSLKISESKEFEELLSKNMNEGSYRDLAE
Sbjct: 582 MKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSLKISESKEFEELLSKNMNEGSYRDLAE 641
Query: 61 MIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPLVGEKSKKDKFGSHSTAKLNGKSYKEK 120
MIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPLVGEKSKKDKFGSHSTAKLNGKSYKEK
Sbjct: 642 MIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPLVGEKSKKDKFGSHSTAKLNGKSYKEK 701
Query: 121 KEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKAMDRFDFSVLSSPRLSLNNLMI 176
KEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKAMDRFDFSVLSSPRLSLNNLMI
Sbjct: 702 KEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKAMDRFDFSVLSSPRLSLNNLMI 756
BLAST of MELO3C015330 vs. ExPASy TrEMBL
Match:
A0A5A7U6J2 (Root phototropism protein 3-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold761G00030 PE=3 SV=1)
HSP 1 Score: 352.4 bits (903), Expect = 1.1e-93
Identity = 174/175 (99.43%), Postives = 175/175 (100.00%), Query Frame = 0
Query: 1 MKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSLKISESKEFEELLSKNMNEGSYRDLAE 60
MKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSLKISESK+FEELLSKNMNEGSYRDLAE
Sbjct: 582 MKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSLKISESKQFEELLSKNMNEGSYRDLAE 641
Query: 61 MIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPLVGEKSKKDKFGSHSTAKLNGKSYKEK 120
MIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPLVGEKSKKDKFGSHSTAKLNGKSYKEK
Sbjct: 642 MIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPLVGEKSKKDKFGSHSTAKLNGKSYKEK 701
Query: 121 KEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKAMDRFDFSVLSSPRLSLNNLMI 176
KEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKAMDRFDFSVLSSPRLSLNNLMI
Sbjct: 702 KEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKAMDRFDFSVLSSPRLSLNNLMI 756
BLAST of MELO3C015330 vs. ExPASy TrEMBL
Match:
A0A0A0LWG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G570130 PE=4 SV=1)
HSP 1 Score: 334.0 bits (855), Expect = 3.9e-88
Identity = 164/175 (93.71%), Postives = 170/175 (97.14%), Query Frame = 0
Query: 1 MKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSLKISESKEFEELLSKNMNEGSYRDLAE 60
MKDKEELAST+YGGSNYWPYRMKLTTDQLRWDSLKISE KEFEELLSKNMNEGSYRDLAE
Sbjct: 16 MKDKEELASTIYGGSNYWPYRMKLTTDQLRWDSLKISEPKEFEELLSKNMNEGSYRDLAE 75
Query: 61 MIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPLVGEKSKKDKFGSHSTAKLNGKSYKEK 120
MIPIEVSIYDVDICETF+VKLVKKEAFWFEPLPLVGEKSKKDK SH+TAK +GKS+KEK
Sbjct: 76 MIPIEVSIYDVDICETFKVKLVKKEAFWFEPLPLVGEKSKKDKLCSHATAKSSGKSHKEK 135
Query: 121 KEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKAMDRFDFSVLSSPRLSLNNLMI 176
KEFVYSIEPFRHIIKKRGLDYQQEIG RWSGSK+MDRFDFSVLSSPRLSLNNLMI
Sbjct: 136 KEFVYSIEPFRHIIKKRGLDYQQEIGFRWSGSKSMDRFDFSVLSSPRLSLNNLMI 190
BLAST of MELO3C015330 vs. ExPASy TrEMBL
Match:
A0A6J1HA02 (uncharacterized protein LOC111461952 OS=Cucurbita moschata OX=3662 GN=LOC111461952 PE=4 SV=1)
HSP 1 Score: 259.6 bits (662), Expect = 9.3e-66
Identity = 127/174 (72.99%), Postives = 143/174 (82.18%), Query Frame = 0
Query: 1 MKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSLKISESKEFEELLSKNMNEGSYRDLAE 60
MKDKEEL S +YGG NYWPYRMKL+TD+LRWDSLKISE EFEE++ +NMNEGSYRDL E
Sbjct: 82 MKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNE 141
Query: 61 MIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPLVGEKSKKDKFGSHSTAKLNGKSYKEK 120
MIPIE+SI+DVDICET++VKLVKKEAFWFEPLPLVGEKS K K +
Sbjct: 142 MIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSSK----------------KYQ 201
Query: 121 KEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKAMDRFDFSVLSSPRLSLNNLM 175
FVYSIEPFRHI+KKRGLDY QEIGLRWSGSK +DRFDFS+LSS RLS+ NL+
Sbjct: 202 SSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI 239
BLAST of MELO3C015330 vs. ExPASy TrEMBL
Match:
A0A6J1HUG6 (uncharacterized protein LOC111467916 OS=Cucurbita maxima OX=3661 GN=LOC111467916 PE=4 SV=1)
HSP 1 Score: 258.8 bits (660), Expect = 1.6e-65
Identity = 128/174 (73.56%), Postives = 142/174 (81.61%), Query Frame = 0
Query: 1 MKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSLKISESKEFEELLSKNMNEGSYRDLAE 60
MKDKEEL S +YGG NYWPYRMKL+TD+LRWDSLKISE EFEE++ +NMNEGSYRDL E
Sbjct: 82 MKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEDTEFEEMMLRNMNEGSYRDLNE 141
Query: 61 MIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPLVGEKSKKDKFGSHSTAKLNGKSYKEK 120
MIPIE+SI+DVDICET++VKLVKKEAFWFEPLPLVGEKSK K +
Sbjct: 142 MIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSK-----------------KYQ 201
Query: 121 KEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKAMDRFDFSVLSSPRLSLNNLM 175
FVYSIEPFRHI+KKRGLDY QEIGLRWSGSK +DRFDFSVLSS RLSL L+
Sbjct: 202 SSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSVLSSSRLSLYTLI 238
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK10230.1 | 9.8e-94 | 100.00 | root phototropism protein 3-like isoform X1 [Cucumis melo var. makuwa] | [more] |
KAA0050878.1 | 2.2e-93 | 99.43 | root phototropism protein 3-like isoform X1 [Cucumis melo var. makuwa] | [more] |
KGN66088.1 | 8.0e-88 | 93.71 | hypothetical protein Csa_007428 [Cucumis sativus] | [more] |
KAG6590385.1 | 1.5e-65 | 73.56 | hypothetical protein SDJN03_15808, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022961362.1 | 1.9e-65 | 72.99 | uncharacterized protein LOC111461952 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3CFT9 | 4.7e-94 | 100.00 | Root phototropism protein 3-like isoform X1 OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A5A7U6J2 | 1.1e-93 | 99.43 | Root phototropism protein 3-like isoform X1 OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A0A0LWG5 | 3.9e-88 | 93.71 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G570130 PE=4 SV=1 | [more] |
A0A6J1HA02 | 9.3e-66 | 72.99 | uncharacterized protein LOC111461952 OS=Cucurbita moschata OX=3662 GN=LOC1114619... | [more] |
A0A6J1HUG6 | 1.6e-65 | 73.56 | uncharacterized protein LOC111467916 OS=Cucurbita maxima OX=3661 GN=LOC111467916... | [more] |
Match Name | E-value | Identity | Description | |