MELO3C014932.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C014932.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr06: 23832426 .. 23832711 (+)
RNA-Seq ExpressionMELO3C014932.jh1
SyntenyMELO3C014932.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGCGAGACCAATGTATCGACTTCAACCACATTGAAAATGAAGATGATAATTCTATCGACTTCAACCGCATTAAAGATGAAGATGATGATTTTATGATTCTATCGACTTCAATTGCATTGAAGATGAAGATGATGATCGTCTCAGTTGAGAACGCATTAAAGATGAAGATGATGATCGTCTTTGCTGCGTCGCATTGAAGATGAAGATGATGATTGTCTCTATTGCGCTGCATGGAAGATGAAGATGTTGTCCGTCTCTGCTACACCATATGAAAGATGA

mRNA sequence

ATGAAGAAGCGAGACCAATGTATCGACTTCAACCACATTGAAAATGAAGATGATAATTCTATCGACTTCAACCGCATTAAAGATGAAGATGATGATTTTATGATTCTATCGACTTCAATTGCATTGAAGATGAAGATGATGATCGTCTCAGTTGAGAACGCATTAAAGATGAAGATGATGATCGTCTTTGCTGCGTCGCATTGAAGATGAAGATGATGATTGTCTCTATTGCGCTGCATGGAAGATGAAGATGTTGTCCGTCTCTGCTACACCATATGAAAGATGA

Coding sequence (CDS)

ATGAAGAAGCGAGACCAATGTATCGACTTCAACCACATTGAAAATGAAGATGATAATTCTATCGACTTCAACCGCATTAAAGATGAAGATGATGATTTTATGATTCTATCGACTTCAATTGCATTGAAGATGAAGATGATGATCGTCTCAGTTGAGAACGCATTAAAGATGAAGATGATGATCGTCTTTGCTGCGTCGCATTGA

Protein sequence

MKKRDQCIDFNHIENEDDNSIDFNRIKDEDDDFMILSTSIALKMKMMIVSVENALKMKMMIVFAASH
Homology
BLAST of MELO3C014932.jh1 vs. NCBI nr
Match: KAA0060323.1 (hypothetical protein E6C27_scaffold22G001070 [Cucumis melo var. makuwa] >TYK22073.1 hypothetical protein E5676_scaffold318G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 126 bits (317), Expect = 1.91e-36
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0

Query: 1  MKKRDQCIDFNHIENEDDNSIDFNRIKDEDDDFMILSTSIALKMKMMIVSVENALKMKMM 60
          MKKRDQCIDFNHIENEDDNSIDFNRIKDEDDDFMILSTSIALKMKMMIVSVENALKMKMM
Sbjct: 1  MKKRDQCIDFNHIENEDDNSIDFNRIKDEDDDFMILSTSIALKMKMMIVSVENALKMKMM 60

Query: 61 IVFAASH 67
          IVFAASH
Sbjct: 61 IVFAASH 67

BLAST of MELO3C014932.jh1 vs. NCBI nr
Match: KAA0047506.1 (phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. makuwa])

HSP 1 Score: 50.4 bits (119), Expect = 3.00e-06
Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0

Query: 5  DQCIDFNHIENEDDNSIDFNRIKDEDDDFMILSTSIALKMKMMIVSV 51
          D  IDF+HIE++DD+SIDF RI+DEDDD    +T   LKMKMMIVS+
Sbjct: 22 DGFIDFDHIEDKDDDSIDFIRIEDEDDDSFYCTT---LKMKMMIVSI 65

BLAST of MELO3C014932.jh1 vs. NCBI nr
Match: TYK26478.1 (glutamic acid-rich protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 48.5 bits (114), Expect = 1.98e-05
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 0

Query: 5  DQCIDFNHIENEDDNSIDFNRIKDEDDDFMILSTSIALKMKMMIVSV 51
          D  IDF+HIE++DD+SIDF RI+DEDDD    +T   LKMKM+IVS+
Sbjct: 28 DGFIDFDHIEDKDDDSIDFIRIEDEDDDRFYYTT---LKMKMIIVSI 71

BLAST of MELO3C014932.jh1 vs. NCBI nr
Match: KAA0047489.1 (prostatic spermine-binding protein-like [Cucumis melo var. makuwa] >TYK26455.1 prostatic spermine-binding protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 48.5 bits (114), Expect = 1.90e-04
Identity = 38/86 (44.19%), Postives = 48/86 (55.81%), Query Frame = 0

Query: 5   DQCIDFNHIENEDDNS-----------IDFNRIKDEDDD-----------FMILSTSIAL 64
           D  +  +HIE+ED+NS           ID+ RIKDEDDD            M+LS +IAL
Sbjct: 137 DDPLGCDHIEDEDNNSLDCSRIKDDDSIDYERIKDEDDDPSAVVALKKMKMMVLSVAIAL 196

Query: 65  KMKMMIVSVENALK-MKMMIVFAASH 67
           KMKMMI+S    LK MKM I+   +H
Sbjct: 197 KMKMMILSTSVVLKKMKMKILSTVTH 222

BLAST of MELO3C014932.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DEV8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00560 PE=4 SV=1)

HSP 1 Score: 126 bits (317), Expect = 9.25e-37
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0

Query: 1  MKKRDQCIDFNHIENEDDNSIDFNRIKDEDDDFMILSTSIALKMKMMIVSVENALKMKMM 60
          MKKRDQCIDFNHIENEDDNSIDFNRIKDEDDDFMILSTSIALKMKMMIVSVENALKMKMM
Sbjct: 1  MKKRDQCIDFNHIENEDDNSIDFNRIKDEDDDFMILSTSIALKMKMMIVSVENALKMKMM 60

Query: 61 IVFAASH 67
          IVFAASH
Sbjct: 61 IVFAASH 67

BLAST of MELO3C014932.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TZV8 (Phosphopantothenoylcysteine decarboxylase subunit VHS3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G001330 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.45e-06
Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0

Query: 5  DQCIDFNHIENEDDNSIDFNRIKDEDDDFMILSTSIALKMKMMIVSV 51
          D  IDF+HIE++DD+SIDF RI+DEDDD    +T   LKMKMMIVS+
Sbjct: 22 DGFIDFDHIEDKDDDSIDFIRIEDEDDDSFYCTT---LKMKMMIVSI 65

BLAST of MELO3C014932.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DSJ5 (Glutamic acid-rich protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00430 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 9.57e-06
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 0

Query: 5  DQCIDFNHIENEDDNSIDFNRIKDEDDDFMILSTSIALKMKMMIVSV 51
          D  IDF+HIE++DD+SIDF RI+DEDDD    +T   LKMKM+IVS+
Sbjct: 28 DGFIDFDHIEDKDDDSIDFIRIEDEDDDRFYYTT---LKMKMIIVSI 71

BLAST of MELO3C014932.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DSX1 (Prostatic spermine-binding protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00120 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 9.22e-05
Identity = 38/86 (44.19%), Postives = 48/86 (55.81%), Query Frame = 0

Query: 5   DQCIDFNHIENEDDNS-----------IDFNRIKDEDDD-----------FMILSTSIAL 64
           D  +  +HIE+ED+NS           ID+ RIKDEDDD            M+LS +IAL
Sbjct: 137 DDPLGCDHIEDEDNNSLDCSRIKDDDSIDYERIKDEDDDPSAVVALKKMKMMVLSVAIAL 196

Query: 65  KMKMMIVSVENALK-MKMMIVFAASH 67
           KMKMMI+S    LK MKM I+   +H
Sbjct: 197 KMKMMILSTSVVLKKMKMKILSTVTH 222

BLAST of MELO3C014932.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BPS5 (Phosphopantothenoylcysteine decarboxylase subunit VHS3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00260 PE=4 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 5.58e-04
Identity = 21/30 (70.00%), Postives = 25/30 (83.33%), Query Frame = 0

Query: 3  KRDQCIDFNHIENEDDNSIDFNRIKDEDDD 32
          + D  IDFNHI++EDD+SIDFN IK EDDD
Sbjct: 15 EEDDSIDFNHIKHEDDDSIDFNHIKHEDDD 44

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0060323.11.91e-36100.00hypothetical protein E6C27_scaffold22G001070 [Cucumis melo var. makuwa] >TYK2207... [more]
KAA0047506.13.00e-0663.83phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo var. m... [more]
TYK26478.11.98e-0561.70glutamic acid-rich protein-like [Cucumis melo var. makuwa][more]
KAA0047489.11.90e-0444.19prostatic spermine-binding protein-like [Cucumis melo var. makuwa] >TYK26455.1 p... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DEV89.25e-37100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TZV81.45e-0663.83Phosphopantothenoylcysteine decarboxylase subunit VHS3-like OS=Cucumis melo var.... [more]
A0A5D3DSJ59.57e-0661.70Glutamic acid-rich protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3DSX19.22e-0544.19Prostatic spermine-binding protein-like OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5D3BPS55.58e-0470.00Phosphopantothenoylcysteine decarboxylase subunit VHS3-like OS=Cucumis melo var.... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C014932.jh1.t1MELO3C014932.jh1.t1mRNA