Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTCAATCTGTTCTTGTTTTTGCTTTGATATTCGTTGCTGCTGTTGCTGGAGTTTTCGCCGAGGCACCCACCGAATCACCTTCAACATCTCCCTCGCCTAAAGCTTCCCCATCGGACTCTGAATCCCCTTCACCGTCTTCTTCTTCTCCTGCAGCCTCTCCAAAGGCCTCATCTGAGACGACATCCCCGTCCCCGGCAGCTTCTTCTCCATCTTCGTCCTCCTCCGATGCTCCAACCAGCGACTCGCCCACCAGCTCTCCAAAATCCTCCCCTTCCGTTTCTCCTTCTCCTGCCACTGACTCCCCCGCTGACTCTCCTGCTGCTGACTCTCCTGCTGACAATGTTGCCGACACCCCAACTGCTGCTTCACCAGATTCCGATGTCTCTTCTCCTCCATCCCCTGATGCGGCCGATGCCCCTACTGCCGCCGATGGCCCTATTGCCGCCGATGGCCCCACCGCGGATTCTCCTGCTGATTCACCCGCCGGTGATGACAAAAGCAGCGGTACTGATCTGAAACTCACCTCCGCCGTGGTTGGTGGTGTCATTGCCGCCGGATTCTATGCATTCTAA
mRNA sequence
ATGGCTTCTCAATCTGTTCTTGTTTTTGCTTTGATATTCGTTGCTGCTGTTGCTGGAGTTTTCGCCGAGGCACCCACCGAATCACCTTCAACATCTCCCTCGCCTAAAGCTTCCCCATCGGACTCTGAATCCCCTTCACCGTCTTCTTCTTCTCCTGCAGCCTCTCCAAAGGCCTCATCTGAGACGACATCCCCGTCCCCGGCAGCTTCTTCTCCATCTTCGTCCTCCTCCGATGCTCCAACCAGCGACTCGCCCACCAGCTCTCCAAAATCCTCCCCTTCCGTTTCTCCTTCTCCTGCCACTGACTCCCCCGCTGACTCTCCTGCTGCTGACTCTCCTGCTGACAATGTTGCCGACACCCCAACTGCTGCTTCACCAGATTCCGATGTCTCTTCTCCTCCATCCCCTGATGCGGCCGATGCCCCTACTGCCGCCGATGGCCCTATTGCCGCCGATGGCCCCACCGCGGATTCTCCTGCTGATTCACCCGCCGGTGATGACAAAAGCAGCGGTACTGATCTGAAACTCACCTCCGCCGTGGTTGGTGGTGTCATTGCCGCCGGATTCTATGCATTCTAA
Coding sequence (CDS)
ATGGCTTCTCAATCTGTTCTTGTTTTTGCTTTGATATTCGTTGCTGCTGTTGCTGGAGTTTTCGCCGAGGCACCCACCGAATCACCTTCAACATCTCCCTCGCCTAAAGCTTCCCCATCGGACTCTGAATCCCCTTCACCGTCTTCTTCTTCTCCTGCAGCCTCTCCAAAGGCCTCATCTGAGACGACATCCCCGTCCCCGGCAGCTTCTTCTCCATCTTCGTCCTCCTCCGATGCTCCAACCAGCGACTCGCCCACCAGCTCTCCAAAATCCTCCCCTTCCGTTTCTCCTTCTCCTGCCACTGACTCCCCCGCTGACTCTCCTGCTGCTGACTCTCCTGCTGACAATGTTGCCGACACCCCAACTGCTGCTTCACCAGATTCCGATGTCTCTTCTCCTCCATCCCCTGATGCGGCCGATGCCCCTACTGCCGCCGATGGCCCTATTGCCGCCGATGGCCCCACCGCGGATTCTCCTGCTGATTCACCCGCCGGTGATGACAAAAGCAGCGGTACTGATCTGAAACTCACCTCCGCCGTGGTTGGTGGTGTCATTGCCGCCGGATTCTATGCATTCTAA
Protein sequence
MASQSVLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAASPKASSETTSPSPAASSPSSSSSDAPTSDSPTSSPKSSPSVSPSPATDSPADSPAADSPADNVADTPTAASPDSDVSSPPSPDAADAPTAADGPIAADGPTADSPADSPAGDDKSSGTDLKLTSAVVGGVIAAGFYAF
Homology
BLAST of MELO3C014828 vs. NCBI nr
Match:
XP_008450043.1 (PREDICTED: mucin-1 [Cucumis melo])
HSP 1 Score: 299.7 bits (766), Expect = 1.8e-77
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0
Query: 1 MASQSVLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAASPKASS 60
MASQSVLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAASPKASS
Sbjct: 1 MASQSVLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAASPKASS 60
Query: 61 ETTSPSPAASSPSSSSSDAPTSDSPTSSPKSSPSVSPSPATDSPADSPAADSPADNVADT 120
ETTSPSPAASSPSSSSSDAPTSDSPTSSPKSSPSVSPSPATDSPADSPAADSPADNVADT
Sbjct: 61 ETTSPSPAASSPSSSSSDAPTSDSPTSSPKSSPSVSPSPATDSPADSPAADSPADNVADT 120
Query: 121 PTAASPDSDVSSPPSPDAADAPTAADGPIAADGPTADSPADSPAGDDKSSGTDLKLTSAV 180
PTAASPDSDVSSPPSPDAADAPTAADGPIAADGPTADSPADSPAGDDKSSGTDLKLTSAV
Sbjct: 121 PTAASPDSDVSSPPSPDAADAPTAADGPIAADGPTADSPADSPAGDDKSSGTDLKLTSAV 180
Query: 181 VGGVIAAGFYAF 193
VGGVIAAGFYAF
Sbjct: 181 VGGVIAAGFYAF 192
BLAST of MELO3C014828 vs. NCBI nr
Match:
KAA0066977.1 (mucin-1 [Cucumis melo var. makuwa] >TYK20871.1 mucin-1 [Cucumis melo var. makuwa])
HSP 1 Score: 296.6 bits (758), Expect = 1.6e-76
Identity = 190/192 (98.96%), Postives = 191/192 (99.48%), Query Frame = 0
Query: 1 MASQSVLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAASPKASS 60
MASQSVLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAASPKASS
Sbjct: 1 MASQSVLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAASPKASS 60
Query: 61 ETTSPSPAASSPSSSSSDAPTSDSPTSSPKSSPSVSPSPATDSPADSPAADSPADNVADT 120
E TSPSPAASSPSSSSSDAPTSDSPTSSPKSSPSVSPSPATDSPADSPAADSPADNVADT
Sbjct: 61 EATSPSPAASSPSSSSSDAPTSDSPTSSPKSSPSVSPSPATDSPADSPAADSPADNVADT 120
Query: 121 PTAASPDSDVSSPPSPDAADAPTAADGPIAADGPTADSPADSPAGDDKSSGTDLKLTSAV 180
PTAASPDSDVSSPPSPDAADAPTAADGP+AADGPTADSPADSPAGDDKSSGTDLKLTSAV
Sbjct: 121 PTAASPDSDVSSPPSPDAADAPTAADGPMAADGPTADSPADSPAGDDKSSGTDLKLTSAV 180
Query: 181 VGGVIAAGFYAF 193
VGGVIAAGFYAF
Sbjct: 181 VGGVIAAGFYAF 192
BLAST of MELO3C014828 vs. NCBI nr
Match:
XP_031737954.1 (classical arabinogalactan protein 11 [Cucumis sativus] >KAE8650788.1 hypothetical protein Csa_017502 [Cucumis sativus])
HSP 1 Score: 234.6 bits (597), Expect = 7.3e-58
Identity = 173/210 (82.38%), Postives = 182/210 (86.67%), Query Frame = 0
Query: 1 MASQSVLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAASPKASS 60
MASQ+VLVFALIF+AAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPA SPKAS
Sbjct: 1 MASQTVLVFALIFLAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAGSPKASP 60
Query: 61 ETTSPSPAASSPSSSSSDAPTSDSPTSSPKSSPSVSPSPATDSPADSPA-----ADSPAD 120
ETTSPSPAASSP SSSSDAPTS+SPTSSP SSPSVSPSPATDSP+DSPA ADSPAD
Sbjct: 61 ETTSPSPAASSP-SSSSDAPTSNSPTSSPTSSPSVSPSPATDSPSDSPASDSPVADSPAD 120
Query: 121 NVADTPTAASPDSDVSSPPSPDAADAPT-----AADGPIAADGPT-------ADSPADSP 180
+ ADTPTAASPDSDVSSPPSPDAADAPT AADGP AADGPT ADSPADSP
Sbjct: 121 SPADTPTAASPDSDVSSPPSPDAADAPTADGPAAADGPTAADGPTAADGPVAADSPADSP 180
Query: 181 AGDDKSSGTDLKLTSAVVGGVIA-AGFYAF 193
A D+ SSGTDLKLTSA+V GV+A GF+AF
Sbjct: 181 ASDE-SSGTDLKLTSAMVVGVVATVGFFAF 208
BLAST of MELO3C014828 vs. NCBI nr
Match:
XP_022983389.1 (mucin-1-like [Cucurbita maxima])
HSP 1 Score: 130.6 bits (327), Expect = 1.5e-26
Identity = 134/257 (52.14%), Postives = 152/257 (59.14%), Query Frame = 0
Query: 1 MASQSVLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSS---------- 60
MASQSVLVFALIFVAAVAG FAEAPT SPS SP+PK++PSDSE+ SPSSS
Sbjct: 1 MASQSVLVFALIFVAAVAGAFAEAPTASPSESPAPKSAPSDSEASSPSSSPADTPADTPA 60
Query: 61 -------------------------------------------------SPAASPKASSE 120
+PA +P ASSE
Sbjct: 61 DTPAETPADTPADTPADTPADTPADTPADTPADTPADTPADTPADTPADTPADTPAASSE 120
Query: 121 TTSPSPAASSPSSSSSDAPTSDSPTSSPKSSPSVSPSPATDSPADSPA-ADSPADNVADT 180
+SPSPAAS+P +S S+AP S+SP SSP SSPSVSPSP TDSPA SPA + SP
Sbjct: 121 -SSPSPAASAP-TSPSEAPASNSPDSSPDSSPSVSPSPDTDSPAASPADSGSP------- 180
Query: 181 PTAASPDSDVSSPPS--PDAADAPTAADGPIAADGPTADSPADSPAGDDKSSGTDLKLTS 193
AASPDSD SSPPS PDAAD+P ADGP DGPT+DSPAD+P GD S + LKLTS
Sbjct: 181 --AASPDSDSSSPPSPTPDAADSP-VADGPSEVDGPTSDSPADAPDGDADSGTSSLKLTS 240
BLAST of MELO3C014828 vs. NCBI nr
Match:
XP_022934589.1 (mucin-1-like [Cucurbita moschata])
HSP 1 Score: 128.3 bits (321), Expect = 7.3e-26
Identity = 134/247 (54.25%), Postives = 153/247 (61.94%), Query Frame = 0
Query: 1 MASQS-VLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSS--------- 60
MASQS VLVFALIFVAAVAG FAEAPT +PS SP+PK++PSDSE+ SPSSS
Sbjct: 1 MASQSFVLVFALIFVAAVAGAFAEAPTATPSESPAPKSAPSDSEASSPSSSPASSPADTP 60
Query: 61 ------------------------------SPAASPKASSETTSPSPAASSPSSSSSDAP 120
+PA +P ASSE +SPSP+AS+P +S S+AP
Sbjct: 61 ADTPADTPADTPAGTPADTPADTPADTPAETPADAPAASSE-SSPSPSASAP-TSPSEAP 120
Query: 121 TSDSPTSSPKSSPSVSPSPATDSPADSPA-ADSPADNVADTPTAASPDSDVSSPPS--PD 180
S+SP SSP SSPSVSPSPATDSPA SPA + SP AASPDSD SSPPS PD
Sbjct: 121 ASNSPDSSPDSSPSVSPSPATDSPAASPADSGSP---------AASPDSDSSSPPSPTPD 180
Query: 181 AADAPTA-----------ADGPIAADGPTADSPADSPAGDDKSSGTDLKLTSAVVGGVIA 193
AAD+P A ADGP ADG +DSPADSP GD S + LKLTSA V G +A
Sbjct: 181 AADSPVADGPSEADGPSEADGPSEADGTISDSPADSPDGDADSGTSALKLTSAAVCGAVA 236
BLAST of MELO3C014828 vs. ExPASy TrEMBL
Match:
A0A1S3BND1 (mucin-1 OS=Cucumis melo OX=3656 GN=LOC103491750 PE=4 SV=1)
HSP 1 Score: 299.7 bits (766), Expect = 8.9e-78
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0
Query: 1 MASQSVLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAASPKASS 60
MASQSVLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAASPKASS
Sbjct: 1 MASQSVLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAASPKASS 60
Query: 61 ETTSPSPAASSPSSSSSDAPTSDSPTSSPKSSPSVSPSPATDSPADSPAADSPADNVADT 120
ETTSPSPAASSPSSSSSDAPTSDSPTSSPKSSPSVSPSPATDSPADSPAADSPADNVADT
Sbjct: 61 ETTSPSPAASSPSSSSSDAPTSDSPTSSPKSSPSVSPSPATDSPADSPAADSPADNVADT 120
Query: 121 PTAASPDSDVSSPPSPDAADAPTAADGPIAADGPTADSPADSPAGDDKSSGTDLKLTSAV 180
PTAASPDSDVSSPPSPDAADAPTAADGPIAADGPTADSPADSPAGDDKSSGTDLKLTSAV
Sbjct: 121 PTAASPDSDVSSPPSPDAADAPTAADGPIAADGPTADSPADSPAGDDKSSGTDLKLTSAV 180
Query: 181 VGGVIAAGFYAF 193
VGGVIAAGFYAF
Sbjct: 181 VGGVIAAGFYAF 192
BLAST of MELO3C014828 vs. ExPASy TrEMBL
Match:
A0A5A7VIK3 (Mucin-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11681G00010 PE=4 SV=1)
HSP 1 Score: 296.6 bits (758), Expect = 7.5e-77
Identity = 190/192 (98.96%), Postives = 191/192 (99.48%), Query Frame = 0
Query: 1 MASQSVLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAASPKASS 60
MASQSVLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAASPKASS
Sbjct: 1 MASQSVLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAASPKASS 60
Query: 61 ETTSPSPAASSPSSSSSDAPTSDSPTSSPKSSPSVSPSPATDSPADSPAADSPADNVADT 120
E TSPSPAASSPSSSSSDAPTSDSPTSSPKSSPSVSPSPATDSPADSPAADSPADNVADT
Sbjct: 61 EATSPSPAASSPSSSSSDAPTSDSPTSSPKSSPSVSPSPATDSPADSPAADSPADNVADT 120
Query: 121 PTAASPDSDVSSPPSPDAADAPTAADGPIAADGPTADSPADSPAGDDKSSGTDLKLTSAV 180
PTAASPDSDVSSPPSPDAADAPTAADGP+AADGPTADSPADSPAGDDKSSGTDLKLTSAV
Sbjct: 121 PTAASPDSDVSSPPSPDAADAPTAADGPMAADGPTADSPADSPAGDDKSSGTDLKLTSAV 180
Query: 181 VGGVIAAGFYAF 193
VGGVIAAGFYAF
Sbjct: 181 VGGVIAAGFYAF 192
BLAST of MELO3C014828 vs. ExPASy TrEMBL
Match:
A0A0A0LDP4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G593190 PE=4 SV=1)
HSP 1 Score: 201.4 bits (511), Expect = 3.3e-48
Identity = 151/181 (83.43%), Postives = 157/181 (86.74%), Query Frame = 0
Query: 1 MASQSVLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAASPKASS 60
MASQ+VLVFALIF+AAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPA SPKAS
Sbjct: 1 MASQTVLVFALIFLAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAGSPKASP 60
Query: 61 ETTSPSPAASSPSSSSSDAPTSDSPTSSPKSSPSVSPSPATDSPADSPA-----ADSPAD 120
ETTSPSPAASSP SSSSDAPTS+SPTSSP SSPSVSPSPATDSP+DSPA ADSPAD
Sbjct: 61 ETTSPSPAASSP-SSSSDAPTSNSPTSSPTSSPSVSPSPATDSPSDSPASDSPVADSPAD 120
Query: 121 NVADTPTAASPDSDVSSPPSPDAADAPTAADGPIAADGPT-ADSP--ADSPAGDDKSSGT 174
+ ADTPTAASPDSDVSSPPSPDAADAPT ADGP AADGPT AD P AD P D +
Sbjct: 121 SPADTPTAASPDSDVSSPPSPDAADAPT-ADGPAAADGPTAADGPTAADGPTAADGPTAA 179
BLAST of MELO3C014828 vs. ExPASy TrEMBL
Match:
A0A6J1J779 (mucin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111481994 PE=4 SV=1)
HSP 1 Score: 130.6 bits (327), Expect = 7.2e-27
Identity = 134/257 (52.14%), Postives = 152/257 (59.14%), Query Frame = 0
Query: 1 MASQSVLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSS---------- 60
MASQSVLVFALIFVAAVAG FAEAPT SPS SP+PK++PSDSE+ SPSSS
Sbjct: 1 MASQSVLVFALIFVAAVAGAFAEAPTASPSESPAPKSAPSDSEASSPSSSPADTPADTPA 60
Query: 61 -------------------------------------------------SPAASPKASSE 120
+PA +P ASSE
Sbjct: 61 DTPAETPADTPADTPADTPADTPADTPADTPADTPADTPADTPADTPADTPADTPAASSE 120
Query: 121 TTSPSPAASSPSSSSSDAPTSDSPTSSPKSSPSVSPSPATDSPADSPA-ADSPADNVADT 180
+SPSPAAS+P +S S+AP S+SP SSP SSPSVSPSP TDSPA SPA + SP
Sbjct: 121 -SSPSPAASAP-TSPSEAPASNSPDSSPDSSPSVSPSPDTDSPAASPADSGSP------- 180
Query: 181 PTAASPDSDVSSPPS--PDAADAPTAADGPIAADGPTADSPADSPAGDDKSSGTDLKLTS 193
AASPDSD SSPPS PDAAD+P ADGP DGPT+DSPAD+P GD S + LKLTS
Sbjct: 181 --AASPDSDSSSPPSPTPDAADSP-VADGPSEVDGPTSDSPADAPDGDADSGTSSLKLTS 240
BLAST of MELO3C014828 vs. ExPASy TrEMBL
Match:
A0A6J1F318 (mucin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111441724 PE=4 SV=1)
HSP 1 Score: 128.3 bits (321), Expect = 3.6e-26
Identity = 134/247 (54.25%), Postives = 153/247 (61.94%), Query Frame = 0
Query: 1 MASQS-VLVFALIFVAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSS--------- 60
MASQS VLVFALIFVAAVAG FAEAPT +PS SP+PK++PSDSE+ SPSSS
Sbjct: 1 MASQSFVLVFALIFVAAVAGAFAEAPTATPSESPAPKSAPSDSEASSPSSSPASSPADTP 60
Query: 61 ------------------------------SPAASPKASSETTSPSPAASSPSSSSSDAP 120
+PA +P ASSE +SPSP+AS+P +S S+AP
Sbjct: 61 ADTPADTPADTPAGTPADTPADTPADTPAETPADAPAASSE-SSPSPSASAP-TSPSEAP 120
Query: 121 TSDSPTSSPKSSPSVSPSPATDSPADSPA-ADSPADNVADTPTAASPDSDVSSPPS--PD 180
S+SP SSP SSPSVSPSPATDSPA SPA + SP AASPDSD SSPPS PD
Sbjct: 121 ASNSPDSSPDSSPSVSPSPATDSPAASPADSGSP---------AASPDSDSSSPPSPTPD 180
Query: 181 AADAPTA-----------ADGPIAADGPTADSPADSPAGDDKSSGTDLKLTSAVVGGVIA 193
AAD+P A ADGP ADG +DSPADSP GD S + LKLTSA V G +A
Sbjct: 181 AADSPVADGPSEADGPSEADGPSEADGTISDSPADSPDGDADSGTSALKLTSAAVCGAVA 236
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3BND1 | 8.9e-78 | 100.00 | mucin-1 OS=Cucumis melo OX=3656 GN=LOC103491750 PE=4 SV=1 | [more] |
A0A5A7VIK3 | 7.5e-77 | 98.96 | Mucin-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11681G00010 PE=4... | [more] |
A0A0A0LDP4 | 3.3e-48 | 83.43 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G593190 PE=4 SV=1 | [more] |
A0A6J1J779 | 7.2e-27 | 52.14 | mucin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111481994 PE=4 SV=1 | [more] |
A0A6J1F318 | 3.6e-26 | 54.25 | mucin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111441724 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |