MELO3C014813 (gene) Melon (DHL92) v4

Overview


Name	MELO3C014813
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	light-regulated protein-like
Location	chr06: 22418558 .. 22429656 (+)
RNA-Seq Expression	MELO3C014813
Synteny	MELO3C014813

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTAGTTATCCTTTTATAATTTTAACAAACTCACAACGTTCATGCATTGGGAGCGATTCATTGCGAAGGGGAAAAGCTAAGAAAAATTTAGCCCACACAAATGGGTGTATATCGGTATGATCTTCAACTCCAAACCCAGAACGCTGTTTCGCACTTCAATCGAAACTGGAACTCTCATCGTTCTCAATTCCCTAATAATGGTGAACTAAATCCTTCTCTCTTCATTCACAATCTCAGATTAAATTCCCCTTGGATTCTCATTTTTCAATAAAAGTCCGGTTCAGAAATGTCCAAATGCAGCAATTGCAGAGCTGCTTCTGCTGTCTCTGAAGTATGAGGTTTGGGAATTAATATTTTATTTCTTCTCTCCATATCTCGCAATTTCTTGATTGCTTCCTCCTTGCAGACTGTGTAATCTGAAGATTCTTGAATTAGTTGTATAATGGTTCCATGTCTCTCATATACCCATGACGTTTTTCCGAGCAAGAATTTTTCCCTGACCCCAAGAGGGAACATACGAGCGAAGAAGGCTCTCTTCTTACTTCAAAACTGCAAGAATTTCAAACACCTCAGGCAAATCCATGCCAAAATCATTCGTAGTGGCCTTTCTAACGATCAATTACTTACTAGGAAACTCATTCATCTCTACTCTACTCATGGAAGAATAGTATATGCGATTTTTCTATTTTATCAAATCCAAAACCCTTGTACGTTTACTTGGAATCTGATAATCAGGGCCAACACTATCAATGGTCTCTCTGAACAAGCTCTCATGTTGTATAAGAACATGGTATGTCAAGGAATTGCAGCCGATAAGTTTACATTTCCATTTGTCATCAAAGCTTGTACAAATTTCTTATCCATTGACCTAGGAAAAGTAGTTCATGGGTCTTCAATCAAATACGGTTTTTCAGGGGATGCATTCGTGCAGAACAATCTGATAGATTTTTACTTTAAGTGTGGACATAAACATTGTGCTTTGAAGGTGTTTGAGAAAATGCGTGTTTGCAATGTGGTTTCATGGACAACCGTGATATCTGGGCTCATCTCTTGCGGTGATTTACTGGAAGCAAGAAGGATATTTGATGAGATGCCATCTAAAAATGTTGTTTCATGGACAGCAATGATAAATGGGTATATTAGAAATCAACAACCTGAAGAAGCTCTTGAACTGTTTAAGAGAATGCAGGCTGAGAATATTTTCCCAAACGAGTATACAATGGTAAGCTTGATCAAAGCATGTACAGAAATGGGAATCTTAAGTCTTGGTCGAGGGATTCACGACTATACAATCAAGAACTGTTTTGAAATTGGTGTTTATCTCGGCACGGCCCTGATTGACATGTACAGCAAATGTGGTAGTATAAAGGATGCAATAGAAGTTTTTGAGACGATGCCTAGAAGAAGTTTGCCGACTTGGAACTCGATGATCACCAGCTTAGGAGTACATGGGTTGGGGCAGCAAGCTCTCAATATTTTCAGTGAAATGGAAAGGGTAAATGTGGAGCCAGATGCAATCACTTTCGTAGGCGTTTTATGCGCTTGTGTACATATGAAGAATGTCAAGGAAGGGTGTGCTTACTTCAAACGAATGACACAACATTATGGTATTGCACCAATTCCTGAGCATTACGAGTGCATGACTGAGCTATATGCTCGTTCTAATAACTTGGATGAAGCCTTCAAATCAACAAAAGCGATATCGGTAGAACCCGATTAGGATTCCTTGGCTTTTCTGTTGAATAATGTGCAAAGAAATATCCAAATGCAGGAAGTGGGAAGTTTGGCCAACAGCCCTTCTCTTTGCTTTGATGCCAGAGCCAAGCAGGTGCGGTATTTTCTGTTGATTATGTGAGCTTACTACTTGCTTTTCATGCTCTTGCATGGTATACGACAAACATTAATTGTTATTGATTTTCATTGCAATAGATATACCCTGTTGATTTCAATGAATTTGAAATTGTTGATAGCAAAATAGGTGTAATATACGAGGGTTAAACGTGCATTCATTATTCTTATGCTTGTGCAAATTGCAATTCCCACATGGACAAACTTCTCTTCCATTTGAAGTTATAAGTAAAACATAATAAACTTATGAAGTAGAAGTTGGTTAATTTTTCTAGTTCTTGAACAAAGCTCCATTGGTGGAAGCAACCCCTCCTTATAGTTGTTAATATATCATGATGGTGTAATATACATATATAAAAAACACAATGCTCAACTCTATCATTCATGCTTAGAGACATGACCATAACCACATGTAGCTCACACAACCTACATAAAATTAAAATGAATTTAAGTTCAAGAAAAGGGTTGATGGAAACAGTTTAACATTTTGTTCATATTTCTATCTTTGCTTTAATCCTCAAAATAGATTTCAAGTTGCAACTTCTTTTGAAAAACTTAAACTCATAAAATTTTGAGGACTTAAAAAAAAAAGAAGTAAAGTGATAGACCTCTAACAGTATTTCAGTATAATAGAAGGAACAAGAAGAAGGTTTAGTATAAGTGGCAGAATTGTAGTAAAAGACAGATTGTAGTAAGTTTGTTAGTAGTCTATTATTCTTTAAGTAGGTCGCTGTGAGTTAGTATAAATAGAGAAGTTTGGGCGAGAAAAGGGTCTCATGTGTAATTTGAGGAGTAAGTTGGCTTGTTCTTTTTAAGAGGAAGAAGACAAGAAGGCCCTAGACATTGAATTGAGTTTCACTCAATTCAATTTACATTGTAATCGAATTCCATTTCATCAATAAACTACAGTATTACTTTCGATTAGTTTGGTATTAGAGCTCGTCGATCCGAAAAAGAGAAGTTGACGATGGTGCAAACAAGAGATCGTCGGAATAAAGAAGGAGTTGAGTAAGATGCCGATAATTGAAGCAACACTGATTAAACGAAGAATATAGAACTAATGTGTCTGCAGTTCGAGAAACATCAGCAGGCCATTCTATCGTACATGGAAACAAATGCGAAGGAGTGATCAATGATCAGTGAATGGATGACTGAGTCGGTTCTATAGGAGTCGTCGACGATGAAATCGAAAGAGAATGAGGCATCTTCCAGTCAAAATATCGAAGAAAACAGAGCCGAAAAGAAAAGTGATTCAGACGATAACTCGGCGGATCGAAGCAAATTTAAGAAAGTGGAAATGGCGGTTTTCATCGGTGAGGATCCCGATTTCTGGCTCTTCCGTGCTGAAAGGTATTTTCAAATACATAAGCTATCTGAATCTGAGAAAATGTTAGTTTCTACTATTAGCTTTGATGGTCCGGCATTAAATTGGTACGTTCGCAAGAGGAGAGGGAGAAATTTGTGAGTTGGTCCAATATGAAAGAAAGGCTATTAGTACGGTTTAGATCTACTAGAGAAGGATCTATTTGTGGCCGATCCTTAGAATTCAATAGGAAACTACGGTAAAAGAATATAGAAACTTGTTTGATAAGTTGGTAACTCCTCTGTCCGACCTACAAGAAATAGTTGTGGAAGAAACTTTTATGAATGGATTATTTCCATGGATACGAGCAGAAGTAGCATTCTGTAGACCGAAAGGCTTAGCCGAGATGGTGTTGATAGCTCAATTGGTTGAAAATAGAGAGATTATTAGAGGTGAAGCGAATTTGAACGGGTTTTCTGGCGAAAAATACCCATCGCAATCCTCAGTGAATGCAAAACCTGCAGCAAATCAGTTTACAAGTGAAAATAAAGGAAATACGTTGTTTCCTATAAGAACGATTACGCTGAGGAGCCCAAATGCCGGTGAAGTGTACAAGGAGGGAACTTCTAAAAGGCTACCTGACCTAGAGTTCCAATTGAGAAGAGAATAGGGACTTTGTTTTAAATGTAATGAGAAGTATTCGGCTTGTCACAAGTGCAAAATGAAAGAGCAGCGAGACCTTAGAATGTTTCTGGTCAACAGTAACAATGAAGAACTTGAAATTATTGAAGAAGTTGAAGCCGAAAGTAAAGAACCGAGAATGGTGGAGGTAAAAGATAACACTGCAGCCTGTGTGGAGTTATCAATTAATTCTGTTGTTGGGTTGACTTGACTGCTCTGGGAACAATGAAAGTCAGAGGTATGTTGCAAGACAAGGAGGTGGTAATTTTGATTGATTGTGGCACCACACATAATTTTGTTTCTGAAAAATTGGTAAAATCTCTACAATTACCAATTAAGGAGACTGGTCATTATGGCGTTATACTCGGTTTAGGCGGCTGTCCAAGGAAAAGGAGTATGTGAGTCTTTAGATGTGAAAATGAATGAATGGAGTGTAAGGGAGGATTTTCTACCATTAGAACTAGGAGGGGTAGACATTATTCTTGGAATGCAATGACTTTATTCACGAAGGGTGACAATTGTAGACGGGAAGAACTTAACATTAACATTTCATGATAATGAGAAGCAAATATGTATCAAAGGTGATCCGAGTCTTACGAAGTCAAGAGTGAGTTTGAAAAATTTATCGAAGACTTGGGAGGAGCAAGATCATGGATATTTTATTGAATGTAGATCTCTTGGGCTGATCGAATTGAATACTACAGTTTCTAAGGAAACAGAGGAAAGTGACGAAACAAAGGGGTTAATCGCTTCTGTGTTAAATCAGTACAATGATGTTTTTGAATGGTCGGAGAAGCTTCCACCTAGAAGGAGCGTTGAACATCATATACATTTAAAAATGGATACTAACCCTGGAAATGTAAGACCATATCGCTATGCATACCATCAAAAGGAAGAAATGGAAAAGCTAGTTGACGAGATGTTAGCCTCGGAGGATATAAGACCGAGTGTAGGTCCATATTCAAGCCCAGTATTATTGGGTTAAAAAGAAAGACGGTAGTTGGCGATTTTGTGTGGACTACTGAGCCCTGAAACATGTCACCGTCTCGGATAAGTTCCCAATTCCGGTGGTTGAAGAATTGTTTAACGAATTGAGTGTAGCTTCCTTATTAACTAAGATTGATCTGAAAGCAGATTATCATCATATTAGAATGGCAGATGAAGATGTGGAAAAGACTGATTTTCGGATGCACAAAGGCCATTACGAGTTTTTAGTAATGCCCTTTGGGCTAACTAATGCTCCGACTACCTTCCAATCATTAATGAATACCATATTCAAGCCTTATTTGAGGAGGTTTGTCTTAGTTTTCTTCGATGATATATTGGTTTATAGTAAGAATATTGATGATCATTTGAAGCATATAGAAGTAGTGTTGATTGTGCTAAGAAAGCATGAGTTGTATGCTAATCGAAAAAAATGCAGTTTTGGCAAAGCAAGGGTAGAGTATTTAGGGCATATAATATCTGAAGATGGGGTGGAAGTAGACCCAGAAAAAATCTAATCTATAGCAGATTGGCCTAAACCAACGAATGTGCGGGAAACACGTGGATTCCTCGAATTAACTGGGTATTATTGAAGGTTTGTGCATCAGTATGAGCCATTGCTGCTCCCCTTACTCAGCTACTAAAGAATGGAGGGTTCAAATGAAGTAAAGAAGCTGATGAGGCTTTTGACAAGCTGAAGGAGGCAATGATGTCTCTACCTATTTTACCGTTACCAAAGTTTGACCGACCCTTTAAGATTAAGACATATGCATCTTGTTTTGGAGTTGGAGTAATATTAATCCAAGATAAACGTCCTATAGCTTTTTATAGCCACACATTGGCAATAAGGGACAGGGGATGGCCGGTATGTGAAAGAGAGCTGATGGTCGTGGTTTTGGCTGTGCAAAGATGGAGACCATATCTGTTGGGAACGAGGTTTATTGTGAGGACTGATCAAAGGTCATTGAAGTTTCTGTTGGAGCAGCGTGTGATACAACCACAATATCAAAGGTGGATTGCTAAACTCTTGGGATATGCATTTGAGTTAGTGTATAAACCCGGAGTTGAGAATAAAGTAGCGGATGCTCTCTCAAGGATCCCCTCTACTGCACAATTGTGTAGTATGATAGCCCCGATCTTTCTTGATTTAAAGACGATTAAAGAAGAAGTCGAAGAGGATGAGAAGCTGTATAAAATTATAACTGAGTTATGTGGGGGATAGGAGCAGCTGTATAAAATTATAACGGAATAAAACTTTATTCTTGTCTCCAATAGGGTTATAAGCCATTTAAGATTCCTACATAGGTTTGGAGTGATATATCTATGGACTTTGTGGATGGTTTTCCTGAGGTAGTAGGTTTTGAAGTAATATTTGTAGTGGTAGACCGACTGAGTAAATATGGCCATTTTTTGCCACTGAAGCATCCATATTCTGCAAAATCAATAGCTGAATTGTTTGTCAAGGAGGTAGTGAGACTTCACGGATTTACCAAATCCATTGTGTCGGATAGAGATAAGGTGTTCCTTAGTAATTTTTTGAAGGAGATGTTTCGATTAGCTGGAATAAAATTGAATAGAAGTTCTGCATATCATCCTCACTCCGATGGACAAACTGAAGTGGTGAATAGAGAAGTTGAGGTATATTTGCAAAAACTGAAGTGGTGAATAGAGGAGTTGAGGTATATTTGCAATGTTTTTGCAGCGAGAAGCCTAAAGAATGGATTAACTGGTTACTGTGGGCCGAGTATTGGTATAATGCCACCTTTCAAAGGGTTTTAGGCATGACACCTTTTCAAGTGGTCTATGGGCACAAACCTCCTTCTCTGATGTTGGCGATCAGGTAACATCCAATGCTACATTGGATGAACAGTTGAAAGAAAGAAATATGTTATTAATGTCCTTAAGAGACCATTTACGGCTGACACAGGGTCAGATGAAAAAATATGCTGATCAGAAAAGACGACATGTGGAGTATGAAGTTAGGGACTTTGTGTTTTTTAAGATAAGACCATATCGTCAATTTTCCTTGAGAGAAAAAAGAAATGAGCTCTCTTCCTAGTATTTCGGACCTTATAAAATCCTTGAAAGGATTGGTCCAGTGGCCTATAGGCTGGAGGAATTATCGACAGGTTCCGTAATCCATCCTATTTTTCATGTGTCTCAACTAAAGAAAGTGGTGGGAGTGCATACTGATGCGCAACCAACAATACAACAGCTGGAAGAGAACTTTGTGTGGAAGACTAATCTTGTTGAAGCTACTGACTATCGCAAAAATAAAGCAAGAGGCTGGGAACTTATGGTGAGCTGGGAAGGATTGCCAAATCATGAGGCAACTTGAGAAATGTACGAGGAAGTGCAGCATAAATATCCGAGTCTTCACCTTGAGGACAAGGTGAATTTGGAAGGGAGGAGTAATGATAGACCTCCAATAGTATTTCAGTACAGTAAAAGGAATAAGAAGAAGGTTTAGTATGAGTGGCAGAATTGTAATAAAAGACAGATTGTAGTAAGTTTGTTAGTAGTCTGTTATTCTTTAAGTAGGTTAGTGTGAGTTAGTATAAATAGAGAGGTTTGGGCAGAAAAAGGATCTCATGTTTAGTTGGAAGAGTTAGTTGGCTTGTTCTTCTTGAGAGGAAGAAGTCAAGAAGGCCCTAGACATTTAATTGAGTTGCAAATTCAATTTACATTGTAATCAAATTCCATTTTATCAATAAACCACAGAATTAATTTCGGTTAGTTCATTATCTACCAAAAAGATAATAGATAGTCGAAAAGATAGAATATAAAACTCAACTATTACAAGTATGTATGTTGTCAGAGGTTGATCATTGTATATATGCAAGGGATGAATAATAGCTATGGTATATACATTTCTATGATGAGATTAACTCAAACATAGCTTAGTTAATAAGATATTGATTACTATTAACAAGTTTGATTGTCAACCTCTCACTTTTAAGAAATAAATTTAATTAAAAAAGAAAAAACAAACTCCTTGGACAAGGTTGATTGATTGGATAGAGCAAATATGTGACTGTTTTTGTTTGAAATCTAGGTTAGAAGTTGGAGTCATAATGGGCAGATTAACTAGGCTTGTACTACTAACCTTCTAAGAAAGAATAGAAGGAACCATGGATTGTGGGCCTAGCCCGAAACATTTGGCCCAAATTATTCTTTCAACCTTCTTTCGAATATCTAAATTGGGTTGCTTCATCAAACCTTAGGTCTGGATTATATTTTGTACGAATAGGTCCTTGTATTTTAGCCTCGGAAAGATAGTGAATCCGTAATCATTCTTAGGACTTCTTGTAAAAGACTGAGCTAAAATGTTCGTTCACTGTTTTGGCTAATGAACAGAAACAAAGAAAAAGAAATCTCAGACTGTATTACAAATTAATCCAAGTAAATCGGATCTTTATAGTATATAAAAAAATAGATAACTATCTCCATAAAATAATATCATATGGTTGAGGGTTATCTTAGGTTATCTACCAAAAAAGAAAGTTATGTCTTTAGTCAACAAGCTAAGCTCACCCTATTTCACCAAAAAGAAAAACAATTGAGGCTAGTTTGAAGAGTTTGCTATTGACACTCTGTAACCTGGAGGGCTGCGCCTACTCTCACACAATCAGTATAGATGTTCCCAAGCAAGAGATAGTGAACATGTCATATAATTAAATGGCAACGCAAGCAATTCTCTTTAGCTGAACCGAGCACTTTGTGTACTAATTTGGGCATCGAAGTGCACTTGATCGACTTGATACTACACTGGCGTAACTATTCTAATTGTTAGTGATATATAATTAAATTTGTCTTTAACCATTAGCTTAAGCTTTTGATTTTCATTTGTTGAGTCTTTCAAATATTTCAAGCCCACTAGTTTAAATTTTTAGGTGAATTGGTAGTTTAATACTAACAAGGTATCTAGACTAGAGAAGGAAGAAGGCATGAATAAGATACCCATCCAAATATATGGGAGAGGTCTATTGTCCTTTAATGGGAGAATGAGAATTTGGCTGTAGAACTGGCCTTCCATCTAATCCAAATTAATCCATTCCATTATATGTTATTTTCAGTGGGGACTGGCAATTTAGCTGTATGTGTAACTTTATTGAGTTAAGACATTATAGATAATGGGCCTTGGGCAAAAATATCTTGGAGAGATTAAAAAATATCTCCAAGATGATGGGAAAGTTTGAAAGCTTCCTATAAATGAATAAACATCATAGGAAGAAGAAGCAAAGCAATCTTATCTAGAGAGACACCCTCCAGTGTATTCTATATAAAGAGTTAATTATAACTTACTTATGCTCATTCAAATCTCAAAACCTTATTTACAACATATCATCAAAATCCAAAATGCAGGCCGCTGTTCTTAGCATTGCTGTTCCTTCCCTTCTTCCCAGCTCAACACTTTCCAATAGTAGCCATTCTCATTTCCCTTTCATCACATTTGGTTCTAACTCATCACGTCCCTCGGCCATCAAAGCAACCGCCTCGGTCGTCTATGACACATCTGTAGTTGATTATAGCTCTGCTATCTCGTAAGTTATTTTCTCTTGCAACCTTAGCTTCTGTTTTGTATTGAAATTAAATTTGAAGCACTACACCAAACTCCTCGATTAAGTTATATCTTTCCATATTGGATCTTGACCTTTAAATTATACATCATTTAATACATAAGTGAAACTACTCGGACTCATTTGACATCTTTTAACTGCAAGAAATTATTAAATACAAAATTGAAAATCATTAACTTAATTATTAGACAAATATGAAAACTTATGGTTTTGATGGTGCCATAAAATGTGAATAAAAGTGTATTCTTGTAATCTACGAGGTTTTAAACGTTGTTGTTGACGAAAATATCAAAGTTTCAATTATGTGGAAATATTAAAAGATAATATTAAAAAATATAAAGTGTGAATAAACATTACCGTTTTAAAATAAGTTTAAATATCGGAGAAAACATCCATTTTCACTCTAAACTTACTCAAAGTTTTATCCTCCTAACTCATAATTCAATTTTAACTGATTCATTCATTAATCGTAAATTATTTTTACTCATAGTTGCAATGAAATAATTTATAAAAGAAAAAGTTTGACCAATGTCAGAATTCATAAATTTCAAAAATTAAAAGAATCTCTCACGTTGTCTTTCTCTAAGGAAATTATCGACTTCATATACATATTGTATGATTTTATTATTTTATATGTATGAAACAACTTTTTTCTATTGATATTTAATTAGAAGTGAGAATTTATTACTTAAAAATCTCTATAATCTAAAATGGATACAATCTGACAAATTTGGAGTTAAAATGGATCTTTTTTCCAATGTTTTATCGTTAACATAATTAGGTTTAAAAGAAAATTTTATATTTTTGGTTGTATAATTCCATCATTGGTATGTTATAATGAAAATATTTGATTATGTCTTATGGTGATGTCAAACTTATCAAAAACATAAAAATATGATGAAGATTTAATAAATTTAAGTTGGTTGAATTCATAGTTTTAAATTTTCACCGGCATCTTGATATATATATATATATATTTTTCTGTTTTAACAAATTTGATGAGAAGATGAGGAATGAAATGATGTATTTTTTTTTTTTTAATTTCTTTATGGTATGAAGGTGGATATTTTAAGAATATTTTGATGAAGGTTGTATATGGTATGAGAACAGGGTGTTTCCAGCAGAAGCATGTGAGACAATAGGTGGAGAGGCATGTTGTTGGGCAAATATGTTTCCAGAAGTAAGGCTTCAGCCTTCACTTAACAATAATCAAAACCCCGCCGTTGCAAATTTGGAGGAGATTGATAGAGAGTATCTTGATTATGCCGCCGATTCAAAGACGTAACTCACTTATTTTTTCCTTTTCTTTTTCATTATCCTCCAAACTTCGAACCATATTATAATATAATCATCTATATGAACAACAATCCTTTTATTATTTCAATATTCAAAATCTAACTCACATCACAACAATATCTTTATCATGTATTTCAAAATGCAGTGTTTTCCGAGGAGAGGCTTGCGATGATCTTGGTGGAGAATTCTGTGAAGCTGAGTTCCTAAATGGGGTTTTCTAGTCTTTTTATTTCATAACAAGCACAAAAATAAAATACTAGAGGCTTCTTAGTTGTTGTTTGATTAGCCCCCATATGCCCATATCATAGCTTCTCTAATTGTAACTTAAAGTCTGTAACATCCTTTTCACTATTCTCTATAAATAATAATGCTTAAATGTTTTAGCTATTTTCTTTCCTTTTTCCAA

mRNA sequence

ATTTAGTTATCCTTTTATAATTTTAACAAACTCACAACGTTCATGCATTGGGAGCGATTCATTGCGAAGGGGAAAAGCTAAGAAAAATTTAGCCCACACAAATGGGTGTATATCGATTAAATTCCCCTTGGATTCTCATTTTTCAATAAAAGTCCGGTTCAGAAATGTCCAAATGCAGCAATTGCAGAGCTGCTTCTGCTGTCTCTGAAGCCGCTGTTCTTAGCATTGCTGTTCCTTCCCTTCTTCCCAGCTCAACACTTTCCAATAGTAGCCATTCTCATTTCCCTTTCATCACATTTGGTTCTAACTCATCACGTCCCTCGGCCATCAAAGCAACCGCCTCGGTCGTCTATGACACATCTGTAGTTGATTATAGCTCTGCTATCTCGGTGTTTCCAGCAGAAGCATGTGAGACAATAGGTGGAGAGGCATGTTGTTGGGCAAATATGTTTCCAGAAGTAAGGCTTCAGCCTTCACTTAACAATAATCAAAACCCCGCCGTTGCAAATTTGGAGGAGATTGATAGAGAGTATCTTGATTATGCCGCCGATTCAAAGACTGTTTTCCGAGGAGAGGCTTGCGATGATCTTGGTGGAGAATTCTGTGAAGCTGAGTTCCTAAATGGGGTTTTCTAGTCTTTTTATTTCATAACAAGCACAAAAATAAAATACTAGAGGCTTCTTAGTTGTTGTTTGATTAGCCCCCATATGCCCATATCATAGCTTCTCTAATTGTAACTTAAAGTCTGTAACATCCTTTTCACTATTCTCTATAAATAATAATGCTTAAATGTTTTAGCTATTTTCTTTCCTTTTTCCAA

Coding sequence (CDS)

ATGTCCAAATGCAGCAATTGCAGAGCTGCTTCTGCTGTCTCTGAAGCCGCTGTTCTTAGCATTGCTGTTCCTTCCCTTCTTCCCAGCTCAACACTTTCCAATAGTAGCCATTCTCATTTCCCTTTCATCACATTTGGTTCTAACTCATCACGTCCCTCGGCCATCAAAGCAACCGCCTCGGTCGTCTATGACACATCTGTAGTTGATTATAGCTCTGCTATCTCGGTGTTTCCAGCAGAAGCATGTGAGACAATAGGTGGAGAGGCATGTTGTTGGGCAAATATGTTTCCAGAAGTAAGGCTTCAGCCTTCACTTAACAATAATCAAAACCCCGCCGTTGCAAATTTGGAGGAGATTGATAGAGAGTATCTTGATTATGCCGCCGATTCAAAGACTGTTTTCCGAGGAGAGGCTTGCGATGATCTTGGTGGAGAATTCTGTGAAGCTGAGTTCCTAAATGGGGTTTTCTAG

Protein sequence

MSKCSNCRAASAVSEAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF

Homology

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BLAST of MELO3C014813 vs. NCBI nr
Match: XP_016900821.1 (PREDICTED: light-regulated protein isoform X3 [Cucumis melo] >XP_016900822.1 PREDICTED: light-regulated protein isoform X3 [Cucumis melo])

HSP 1 Score: 306.2 bits (783), Expect = 1.6e-79
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MSKCSNCRAASAVSEAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATAS 60
           MSKCSNCRAASAVSEAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATAS
Sbjct: 1   MSKCSNCRAASAVSEAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATAS 60

Query: 61  VVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEID 120
           VVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEID
Sbjct: 61  VVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEID 120

Query: 121 REYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF 157
           REYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF
Sbjct: 121 REYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF 156

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BLAST of MELO3C014813 vs. NCBI nr
Match: XP_008450019.2 (PREDICTED: light-regulated protein isoform X2 [Cucumis melo])

HSP 1 Score: 280.4 bits (716), Expect = 9.4e-72
Identity = 145/155 (93.55%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 2   SKCSNCRAASAVSEAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATASV 61
           S C + RA     +AAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATASV
Sbjct: 12  SLCFDARA----KQAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATASV 71

Query: 62  VYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDR 121
           VYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDR
Sbjct: 72  VYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDR 131

Query: 122 EYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF 157
           EYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF
Sbjct: 132 EYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF 162

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BLAST of MELO3C014813 vs. NCBI nr
Match: KAA0066931.1 (light-regulated protein isoform X2 [Cucumis melo var. makuwa] >TYK30213.1 light-regulated protein isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 276.9 bits (707), Expect = 1.0e-70
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 15  EAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATASVVYDTSVVDYSSAI 74
           +AAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSR SAIKATASVVYDTSVVDYSSAI
Sbjct: 2   QAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAI 61

Query: 75  SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVF 134
           SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVF
Sbjct: 62  SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVF 121

Query: 135 RGEACDDLGGEFCEAEFLNGVF 157
           RGEACDDLGGEFCEAEFLNGVF
Sbjct: 122 RGEACDDLGGEFCEAEFLNGVF 143

[Close]

BLAST of MELO3C014813 vs. NCBI nr
Match: XP_004145699.2 (light-regulated protein, chloroplastic [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 8.8e-54
Identity = 119/144 (82.64%), Postives = 127/144 (88.19%), Query Frame = 0


Query: 13  VSEAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATASVVYDTSVVDYSS 72
           ++  AVLSIAVPSLLPSSTLS++  SHFP ITF S+SSR S+IKATASVVYDTSVVDYSS
Sbjct: 16  ITMQAVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSS 75

Query: 73  AISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKT 132
           AISVFPAEACETIGGEAC W NMFPEVRLQ +  NNQNP VA+ EEIDREYLDY ADSKT
Sbjct: 76  AISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNP-VASSEEIDREYLDY-ADSKT 135

Query: 133 VFRGEACDDLGGEFCEAEFLNGVF 157
           VF GEACDDLGGEFCE EFLNGVF
Sbjct: 136 VFPGEACDDLGGEFCEPEFLNGVF 157

[Close]

BLAST of MELO3C014813 vs. NCBI nr
Match: KAE8650797.1 (hypothetical protein Csa_017474 [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 8.8e-54
Identity = 120/145 (82.76%), Postives = 128/145 (88.28%), Query Frame = 0


Query: 12  AVSEAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATASVVYDTSVVDYS 71
           A ++ AVLSIAVPSLLPSSTLS++  SHFP ITF S+SSR S+IKATASVVYDTSVVDYS
Sbjct: 275 ARAKQAVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYS 334

Query: 72  SAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSK 131
           SAISVFPAEACETIGGEAC W NMFPEVRLQ +  NNQNP VA+ EEIDREYLDY ADSK
Sbjct: 335 SAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNP-VASSEEIDREYLDY-ADSK 394

Query: 132 TVFRGEACDDLGGEFCEAEFLNGVF 157
           TVF GEACDDLGGEFCE EFLNGVF
Sbjct: 395 TVFPGEACDDLGGEFCEPEFLNGVF 417

[Close]

BLAST of MELO3C014813 vs. ExPASy Swiss-Prot
Match: Q03200 (Light-regulated protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=LIR1 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 5.3e-17
Identity = 51/93 (54.84%), Postives = 62/93 (66.67%), Query Frame = 0


Query: 57  ATASVVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANL 116
           A A+V  + + VDYSS ISVFP EAC+ IGGEAC    M+PE +L  S     + A A  
Sbjct: 39  AAAAVAVEAAEVDYSSNISVFPMEACDLIGGEACN-VQMYPEAKLSSSAAVAVSRAAA-- 98

Query: 117 EEIDREYLDYAADSKTVFRGEACDDLGGEFCEA 150
           EE+DR+YL Y  +  TVF  EACDDLGGEFC+A
Sbjct: 99  EEVDRDYLSY-DEPTTVFPEEACDDLGGEFCKA 127

[Close]

BLAST of MELO3C014813 vs. ExPASy Swiss-Prot
Match: Q96500 (Light-regulated protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIR1 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.4e-16
Identity = 61/128 (47.66%), Postives = 80/128 (62.50%), Query Frame = 0


Query: 27  LPSSTLSNSSHSHFPFITFGS--NSSRPSAIKATASVVYDTSVVDYSSAI-SVFPAEACE 86
           LPSS  S       P  T  S  +S R +   +++S+  D + VDY+S+I SVFPAEACE
Sbjct: 15  LPSSVSSPKLTFLLPHATKASRLSSLRSNNSSSSSSLTSDPNTVDYNSSILSVFPAEACE 74

Query: 87  TIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVFRGEACDDLG 146
            I G AC  A+++PEV+L        +  VA+ E +DREY +Y +  KTVFR EACDDLG
Sbjct: 75  VISGYACS-ADIYPEVKLD---TKPVSRPVAS-EPVDREYEEYNS-PKTVFREEACDDLG 134

Query: 147 GEFCEAEF 152
           GEFCE +F
Sbjct: 135 GEFCEPDF 136

[Close]

BLAST of MELO3C014813 vs. ExPASy TrEMBL
Match: A0A1S4DXW1 (light-regulated protein isoform X3 OS=Cucumis melo OX=3656 GN=LOC103491736 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 7.7e-80
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MSKCSNCRAASAVSEAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATAS 60
           MSKCSNCRAASAVSEAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATAS
Sbjct: 1   MSKCSNCRAASAVSEAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATAS 60

Query: 61  VVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEID 120
           VVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEID
Sbjct: 61  VVYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEID 120

Query: 121 REYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF 157
           REYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF
Sbjct: 121 REYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF 156

[Close]

BLAST of MELO3C014813 vs. ExPASy TrEMBL
Match: A0A1S3BND3 (light-regulated protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491736 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.5e-72
Identity = 145/155 (93.55%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 2   SKCSNCRAASAVSEAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATASV 61
           S C + RA     +AAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATASV
Sbjct: 12  SLCFDARA----KQAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATASV 71

Query: 62  VYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDR 121
           VYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDR
Sbjct: 72  VYDTSVVDYSSAISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDR 131

Query: 122 EYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF 157
           EYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF
Sbjct: 132 EYLDYAADSKTVFRGEACDDLGGEFCEAEFLNGVF 162

[Close]

BLAST of MELO3C014813 vs. ExPASy TrEMBL
Match: A0A5A7VMP8 (Light-regulated protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00270 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 5.0e-71
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 15  EAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATASVVYDTSVVDYSSAI 74
           +AAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSR SAIKATASVVYDTSVVDYSSAI
Sbjct: 2   QAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRRSAIKATASVVYDTSVVDYSSAI 61

Query: 75  SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVF 134
           SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVF
Sbjct: 62  SVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVF 121

Query: 135 RGEACDDLGGEFCEAEFLNGVF 157
           RGEACDDLGGEFCEAEFLNGVF
Sbjct: 122 RGEACDDLGGEFCEAEFLNGVF 143

[Close]

BLAST of MELO3C014813 vs. ExPASy TrEMBL
Match: A0A0A0L8G9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G598910 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 4.3e-54
Identity = 119/144 (82.64%), Postives = 127/144 (88.19%), Query Frame = 0


Query: 13  VSEAAVLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATASVVYDTSVVDYSS 72
           ++  AVLSIAVPSLLPSSTLS++  SHFP ITF S+SSR S+IKATASVVYDTSVVDYSS
Sbjct: 16  ITMQAVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSS 75

Query: 73  AISVFPAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKT 132
           AISVFPAEACETIGGEAC W NMFPEVRLQ +  NNQNP VA+ EEIDREYLDY ADSKT
Sbjct: 76  AISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNP-VASSEEIDREYLDY-ADSKT 135

Query: 133 VFRGEACDDLGGEFCEAEFLNGVF 157
           VF GEACDDLGGEFCE EFLNGVF
Sbjct: 136 VFPGEACDDLGGEFCEPEFLNGVF 157

[Close]

BLAST of MELO3C014813 vs. ExPASy TrEMBL
Match: C9E9F1 (GA-like protein (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 9.5e-54
Identity = 118/139 (84.89%), Postives = 124/139 (89.21%), Query Frame = 0


Query: 18  VLSIAVPSLLPSSTLSNSSHSHFPFITFGSNSSRPSAIKATASVVYDTSVVDYSSAISVF 77
           VLSIAVPSLLPSSTLS++  SHFP ITF S+SSR S+IKATASVVYDTSVVDYSSAISVF
Sbjct: 1   VLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVF 60

Query: 78  PAEACETIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVFRGE 137
           PAEACETIGGEAC W NMFPEVRLQ +  NNQNP VA+ EEIDREYLDY ADSKTVF GE
Sbjct: 61  PAEACETIGGEACGWENMFPEVRLQQASLNNQNP-VASSEEIDREYLDY-ADSKTVFPGE 120

Query: 138 ACDDLGGEFCEAEFLNGVF 157
           ACDDLGGEFCE EFLNGVF
Sbjct: 121 ACDDLGGEFCEPEFLNGVF 137

[Close]

BLAST of MELO3C014813 vs. TAIR 10
Match: AT3G26740.1 (CCR-like )

HSP 1 Score: 86.3 bits (212), Expect = 2.4e-17
Identity = 61/128 (47.66%), Postives = 80/128 (62.50%), Query Frame = 0


Query: 27  LPSSTLSNSSHSHFPFITFGS--NSSRPSAIKATASVVYDTSVVDYSSAI-SVFPAEACE 86
           LPSS  S       P  T  S  +S R +   +++S+  D + VDY+S+I SVFPAEACE
Sbjct: 15  LPSSVSSPKLTFLLPHATKASRLSSLRSNNSSSSSSLTSDPNTVDYNSSILSVFPAEACE 74

Query: 87  TIGGEACCWANMFPEVRLQPSLNNNQNPAVANLEEIDREYLDYAADSKTVFRGEACDDLG 146
            I G AC  A+++PEV+L        +  VA+ E +DREY +Y +  KTVFR EACDDLG
Sbjct: 75  VISGYACS-ADIYPEVKLD---TKPVSRPVAS-EPVDREYEEYNS-PKTVFREEACDDLG 134

Query: 147 GEFCEAEF 152
           GEFCE +F
Sbjct: 135 GEFCEPDF 136

The following BLAST results are available for this feature:

BLAST of MELO3C014813 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900821.1	1.6e-79	100.00	PREDICTED: light-regulated protein isoform X3 [Cucumis melo] >XP_016900822.1 PRE...	[more]
XP_008450019.2	9.4e-72	93.55	PREDICTED: light-regulated protein isoform X2 [Cucumis melo]	[more]
KAA0066931.1	1.0e-70	98.59	light-regulated protein isoform X2 [Cucumis melo var. makuwa] >TYK30213.1 light-...	[more]
XP_004145699.2	8.8e-54	82.64	light-regulated protein, chloroplastic [Cucumis sativus]	[more]
KAE8650797.1	8.8e-54	82.76	hypothetical protein Csa_017474 [Cucumis sativus]	[more]

BLAST of MELO3C014813 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q03200	5.3e-17	54.84	Light-regulated protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q96500	3.4e-16	47.66	Light-regulated protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIR1...	[more]

BLAST of MELO3C014813 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DXW1	7.7e-80	100.00	light-regulated protein isoform X3 OS=Cucumis melo OX=3656 GN=LOC103491736 PE=4 ...	[more]
A0A1S3BND3	4.5e-72	93.55	light-regulated protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491736 PE=4 ...	[more]
A0A5A7VMP8	5.0e-71	98.59	Light-regulated protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A0A0L8G9	4.3e-54	82.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G598910 PE=4 SV=1	[more]
C9E9F1	9.5e-54	84.89	GA-like protein (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]

BLAST of MELO3C014813 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26740.1	2.4e-17	47.66	CCR-like	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009856	Light regulated Lir1	PFAM	PF07207	Lir1	coord: 19..149 e-value: 3.5E-42 score: 143.8
IPR009856	Light regulated Lir1	PANTHER	PTHR36762	LIGHT-REGULATED PROTEIN 1, CHLOROPLASTIC	coord: 17..156
None	No IPR available	PANTHER	PTHR36762:SF3	LIGHT-REGULATED PROTEIN	coord: 17..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C014813.1	MELO3C014813.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast