
MELO3C014587 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATCACTTCACTTCCTCCCACACTCCCAAACATAAACTACATCCTATTTCTCCTTCACCCAATTCCTCAACTTATCAACAATCTCTCTAACCCCAATTTCTCAAATTTCCTAAATATGGCTTCCATGGCTATGACAGCTTCCTTCCTCCCCACCACCGCCACCAAACAACCCTCCGCCACCCCCCGTAGAGCCCTTATTGTTGCCAAAGCATCCACCTCTAACGAAACCTCCAATGTCAACTTGGAGGTCAAGAATGTGAAGGTAGAGAGCAGGCAAGGGCGGCGGGAGTTGGTGGCGGCTGCTGTCACAGTAGCTGCGGCAACCTTGGCGAAGGCGGCGATGGCGGATGAGCCGGCACGTGGGTCTCCTGAAGCCAAGCAGAAGTATGCTCCAATCTGTGTCACAATGCCTACTGCCCGTATTTGCCGCAAGTGATTTTGAAGAGATGTATTTTTTTTCTCTGTTGTCTTTCTTCTTCTTGTCTATTAAAACCCTTCCATTTGGTTTCAGACTTTGGAGTTTGATTGTAAAATCTGTAAAACAAAGCTATGAATTGCCATGAATCTCTCTCTTCATGTCCTTTTTTCTTGTTTTTGCCTTTCTCAGTCTCAAAGTTCATTCAAGTATTCTTTTTTTCTTCTTCACATTTTATCAATGTTGATGATCATAACACTATACAAACACCACATTTGATAATAACTCATTCAAAG AATCACTTCACTTCCTCCCACACTCCCAAACATAAACTACATCCTATTTCTCCTTCACCCAATTCCTCAACTTATCAACAATCTCTCTAACCCCAATTTCTCAAATTTCCTAAATATGGCTTCCATGGCTATGACAGCTTCCTTCCTCCCCACCACCGCCACCAAACAACCCTCCGCCACCCCCCGTAGAGCCCTTATTGTTGCCAAAGCATCCACCTCTAACGAAACCTCCAATGTCAACTTGGAGGTCAAGAATGTGAAGGTAGAGAGCAGGCAAGGGCGGCGGGAGTTGGTGGCGGCTGCTGTCACAGTAGCTGCGGCAACCTTGGCGAAGGCGGCGATGGCGGATGAGCCGGCACGTGGGTCTCCTGAAGCCAAGCAGAAGTATGCTCCAATCTGTGTCACAATGCCTACTGCCCGTATTTGCCGCAAGTGATTTTGAAGAGATGTATTTTTTTTCTCTGTTGTCTTTCTTCTTCTTGTCTATTAAAACCCTTCCATTTGGTTTCAGACTTTGGAGTTTGATTGTAAAATCTGTAAAACAAAGCTATGAATTGCCATGAATCTCTCTCTTCATGTCCTTTTTTCTTGTTTTTGCCTTTCTCAGTCTCAAAGTTCATTCAAGTATTCTTTTTTTCTTCTTCACATTTTATCAATGTTGATGATCATAACACTATACAAACACCACATTTGATAATAACTCATTCAAAG ATCACTTCACTTCCTCCCACACTCCCAAACATAAACTACATCCTATTTCTCCTTCACCCAATTCCTCAACTTATCAACAATCTCTCTAACCCCAATTTCTCAAATTTCCTAAATATGGCTTCCATGGCTATGACAGCTTCCTTCCTCCCCACCACCGCCACCAAACAACCCTCCGCCACCCCCCGTAGAGCCCTTATTGTTGCCAAAGCATCCACCTCTAACGAAACCTCCAATGTCAACTTGGAGGTCAAGAATGTGAAGGTAGAGAGCAGGCAAGGGCGGCGGGAGTTGGTGGCGGCTGCTGTCACAGTAGCTGCGGCAACCTTGGCGAAGGCGGCGATGGCGGATGAGCCGGCACGTGGGTCTCCTGAAGCCAAGCAGAAGTATGCTCCAATCTGTGTCACAATGCCTACTGCCCGTATTTGCCGCAAGTGA ITSLPPTLPNINYILFLLHPIPQLINNLSNPNFSNFLNMASMAMTASFLPTTATKQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELVAAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK Homology
BLAST of MELO3C014587 vs. NCBI nr
Match: XP_008449703.1 (PREDICTED: photosystem II 5 kDa protein, chloroplastic [Cucumis melo] >KAA0041421.1 photosystem II 5 kDa protein [Cucumis melo var. makuwa] >TYJ96132.1 photosystem II 5 kDa protein [Cucumis melo var. makuwa]) HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of MELO3C014587 vs. NCBI nr
Match: XP_004143237.1 (photosystem II 5 kDa protein, chloroplastic [Cucumis sativus]) HSP 1 Score: 180.3 bits (456), Expect = 1.2e-41 Identity = 100/106 (94.34%), Postives = 103/106 (97.17%), Query Frame = 0
BLAST of MELO3C014587 vs. NCBI nr
Match: XP_038901593.1 (photosystem II 5 kDa protein, chloroplastic [Benincasa hispida]) HSP 1 Score: 171.0 bits (432), Expect = 7.4e-39 Identity = 94/106 (88.68%), Postives = 99/106 (93.40%), Query Frame = 0
BLAST of MELO3C014587 vs. NCBI nr
Match: XP_022944588.1 (photosystem II 5 kDa protein, chloroplastic [Cucurbita moschata] >XP_022986667.1 photosystem II 5 kDa protein, chloroplastic [Cucurbita maxima]) HSP 1 Score: 146.4 bits (368), Expect = 2.0e-31 Identity = 86/110 (78.18%), Postives = 92/110 (83.64%), Query Frame = 0
BLAST of MELO3C014587 vs. NCBI nr
Match: KAG6570402.1 (Photosystem II 5 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010275.1 Photosystem II 5 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 142.5 bits (358), Expect = 2.8e-30 Identity = 89/113 (78.76%), Postives = 93/113 (82.30%), Query Frame = 0
BLAST of MELO3C014587 vs. ExPASy Swiss-Prot
Match: Q39195 (Photosystem II 5 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBT PE=3 SV=2) HSP 1 Score: 80.9 bits (198), Expect = 1.3e-14 Identity = 58/107 (54.21%), Postives = 71/107 (66.36%), Query Frame = 0
BLAST of MELO3C014587 vs. ExPASy Swiss-Prot
Match: P31336 (Photosystem II 5 kDa protein, chloroplastic OS=Gossypium hirsutum OX=3635 GN=PSBT PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.3e-13 Identity = 52/106 (49.06%), Postives = 66/106 (62.26%), Query Frame = 0
BLAST of MELO3C014587 vs. ExPASy Swiss-Prot
Match: B3EWI4 (Photosystem II 5 kDa protein, chloroplastic OS=Petunia hybrida OX=4102 PE=1 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.0e-11 Identity = 49/108 (45.37%), Postives = 65/108 (60.19%), Query Frame = 0
BLAST of MELO3C014587 vs. ExPASy TrEMBL
Match: A0A5A7TID9 (Photosystem II 5 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00980 PE=4 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 5.3e-67 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of MELO3C014587 vs. ExPASy TrEMBL
Match: A0A1S3BML8 (photosystem II 5 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491503 PE=4 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 5.3e-67 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of MELO3C014587 vs. ExPASy TrEMBL
Match: A0A0A0KIB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G439930 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 5.9e-42 Identity = 100/106 (94.34%), Postives = 103/106 (97.17%), Query Frame = 0
BLAST of MELO3C014587 vs. ExPASy TrEMBL
Match: A0A6J1J874 (photosystem II 5 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111484352 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 9.5e-32 Identity = 86/110 (78.18%), Postives = 92/110 (83.64%), Query Frame = 0
BLAST of MELO3C014587 vs. ExPASy TrEMBL
Match: A0A6J1FY72 (photosystem II 5 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449001 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 9.5e-32 Identity = 86/110 (78.18%), Postives = 92/110 (83.64%), Query Frame = 0
BLAST of MELO3C014587 vs. TAIR 10
Match: AT1G51400.1 (Photosystem II 5 kD protein ) HSP 1 Score: 82.4 bits (202), Expect = 3.2e-16 Identity = 58/108 (53.70%), Postives = 73/108 (67.59%), Query Frame = 0
BLAST of MELO3C014587 vs. TAIR 10
Match: AT3G21055.1 (photosystem II subunit T ) HSP 1 Score: 80.9 bits (198), Expect = 9.4e-16 Identity = 58/107 (54.21%), Postives = 71/107 (66.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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