MELO3C014553 (gene) Melon (DHL92) v4

Overview


Name	MELO3C014553
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Protein EMSY-LIKE 3 isoform X2
Location	chr01: 33052297 .. 33052645 (+)
RNA-Seq Expression	MELO3C014553
Synteny	MELO3C014553

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAGCTCGTGGTTTCGGTGCTGGAGGATGTTGCGCCGTCGTGCGCCGTGGGTATCCGTCTGCAAGGGTGTAGAAGAGCAGCTAGTCGCTATTGTAGAAAAGCAGCAAACAGTCGTCAATAGTCTAGGTGCGGCACGGGTGGCTGGTCGGAGTCTGACTGATGACTGCTGGTGGCGGAGGGTATACTGGGTCTATAGAGAATCGCCGGAGTTGAAGAAGAAACACTGGCCGCCGGCGGCTATAAACATGACGCGGGGGAATGTGAAGGATGAAAAGAAAGAGGGAAACCAAGAGAGTTTCTTTCTATTTTTTATTTATGAACATTTAGAATTTCAATTCGACCAAA

mRNA sequence

ATGTGGAGCTCGTGGTTTCGGTGCTGGAGGATGTTGCGCCGTCGTGCGCCGTGGGTATCCGTCTGCAAGGGTGTAGAAGAGCAGCTAGTCGCTATTGTAGAAAAGCAGCAAACAGTCGTCAATAGTCTAGGTGCGGCACGGGTGGCTGGTCGGAGTCTGACTGATGACTGCTGGTGGCGGAGGGTATACTGGGTCTATAGAGAATCGCCGGAGTTGAAGAAGAAACACTGGCCGCCGGCGGCTATAAACATGACGCGGGGGAATGTGAAGGATGAAAAGAAAGAGGGAAACCAAGAGAGTTTCTTTCTATTTTTTATTTATGAACATTTAGAATTTCAATTCGACCAAA

Coding sequence (CDS)

ATGTGGAGCTCGTGGTTTCGGTGCTGGAGGATGTTGCGCCGTCGTGCGCCGTGGGTATCCGTCTGCAAGGGTGTAGAAGAGCAGCTAGTCGCTATTGTAGAAAAGCAGCAAACAGTCGTCAATAGTCTAGGTGCGGCACGGGTGGCTGGTCGGAGTCTGACTGATGACTGCTGGTGGCGGAGGGTATACTGGGTCTATAGAGAATCGCCGGAGTTGAAGAAGAAACACTGGCCGCCGGCGGCTATAAACATGACGCGGGGGAATGTGAAGGATGAAAAGAAAGAGGGAAACCAAGAGAGTTTCTTTCTATTTTTTATTTATGAACATTTAGAATTTCAATTCGACCAA

Protein sequence

MWSSWFRCWRMLRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWRRVYWVYRESPELKKKHWPPAAINMTRGNVKDEKKEGNQESFFLFFIYEHLEFQFDQ

Homology

[Close]

BLAST of MELO3C014553 vs. NCBI nr
Match: TYK10467.1 (protein EMSY-LIKE 3 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 218.0 bits (554), Expect = 4.3e-53
Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 0


Query: 1   MWSSWFRCWRMLRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWR 60
           MWSSWFRCWRMLRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWR
Sbjct: 1   MWSSWFRCWRMLRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWR 60

Query: 61  RVYWVYRESPELKKKHWPPAAINMTRGNVKDEKKEGNQESF 102
           RVYWVYRESPELKKKHWPPAAINMTRGNVKDEKKEGNQE F
Sbjct: 61  RVYWVYRESPELKKKHWPPAAINMTRGNVKDEKKEGNQERF 101

[Close]

BLAST of MELO3C014553 vs. NCBI nr
Match: KAA0058660.1 (protein EMSY-LIKE 3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 218.0 bits (554), Expect = 4.3e-53
Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 0


Query: 1   MWSSWFRCWRMLRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWR 60
           MWSSWFRCWRMLRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWR
Sbjct: 1   MWSSWFRCWRMLRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWR 60

Query: 61  RVYWVYRESPELKKKHWPPAAINMTRGNVKDEKKEGNQESF 102
           RVYWVYRESPELKKKHWPPAAINMTRGNVKDEKKEGNQE F
Sbjct: 61  RVYWVYRESPELKKKHWPPAAINMTRGNVKDEKKEGNQERF 101

[Close]

BLAST of MELO3C014553 vs. NCBI nr
Match: KAA0061762.1 (dihydropyrimidinase [Cucumis melo var. makuwa])

HSP 1 Score: 129.4 bits (324), Expect = 2.0e-26
Identity = 63/76 (82.89%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 1  MWSSWFRCWRMLRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWR 60
          MWSS FRCWRML RRAPWVSVCKGV+EQ VA VE+QQTVVNS+ AARVAGRS TDDCW R
Sbjct: 1  MWSSIFRCWRMLLRRAPWVSVCKGVKEQPVATVEEQQTVVNSVDAARVAGRSRTDDCWRR 60

Query: 61 RVYWVYRESPELKKKH 77
          RV+ VY ESPELKKKH
Sbjct: 61 RVWRVYGESPELKKKH 76

[Close]

BLAST of MELO3C014553 vs. NCBI nr
Match: TYJ96104.1 (dihydropyrimidinase [Cucumis melo var. makuwa])

HSP 1 Score: 127.9 bits (320), Expect = 5.8e-26
Identity = 62/76 (81.58%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 1  MWSSWFRCWRMLRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWR 60
          MWSS FRCWRML RRAPWVSVCKGV+E+ VA VE+QQTVVNS+ AARVAGRS TDDCW R
Sbjct: 1  MWSSIFRCWRMLLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRR 60

Query: 61 RVYWVYRESPELKKKH 77
          RV+ VY ESPELKKKH
Sbjct: 61 RVWRVYGESPELKKKH 76

[Close]

BLAST of MELO3C014553 vs. ExPASy TrEMBL
Match: A0A5A7UUE7 (Protein EMSY-LIKE 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G001300 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.1e-53
Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 0


Query: 1   MWSSWFRCWRMLRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWR 60
           MWSSWFRCWRMLRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWR
Sbjct: 1   MWSSWFRCWRMLRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWR 60

Query: 61  RVYWVYRESPELKKKHWPPAAINMTRGNVKDEKKEGNQESF 102
           RVYWVYRESPELKKKHWPPAAINMTRGNVKDEKKEGNQE F
Sbjct: 61  RVYWVYRESPELKKKHWPPAAINMTRGNVKDEKKEGNQERF 101

[Close]

BLAST of MELO3C014553 vs. ExPASy TrEMBL
Match: A0A5D3CES2 (Protein EMSY-LIKE 3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001160 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.1e-53
Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 0


Query: 1   MWSSWFRCWRMLRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWR 60
           MWSSWFRCWRMLRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWR
Sbjct: 1   MWSSWFRCWRMLRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWR 60

Query: 61  RVYWVYRESPELKKKHWPPAAINMTRGNVKDEKKEGNQESF 102
           RVYWVYRESPELKKKHWPPAAINMTRGNVKDEKKEGNQE F
Sbjct: 61  RVYWVYRESPELKKKHWPPAAINMTRGNVKDEKKEGNQERF 101

[Close]

BLAST of MELO3C014553 vs. ExPASy TrEMBL
Match: A0A5A7V0Q1 (Dihydropyrimidinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001400 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 9.6e-27
Identity = 63/76 (82.89%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 1  MWSSWFRCWRMLRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWR 60
          MWSS FRCWRML RRAPWVSVCKGV+EQ VA VE+QQTVVNS+ AARVAGRS TDDCW R
Sbjct: 1  MWSSIFRCWRMLLRRAPWVSVCKGVKEQPVATVEEQQTVVNSVDAARVAGRSRTDDCWRR 60

Query: 61 RVYWVYRESPELKKKH 77
          RV+ VY ESPELKKKH
Sbjct: 61 RVWRVYGESPELKKKH 76

[Close]

BLAST of MELO3C014553 vs. ExPASy TrEMBL
Match: A0A5D3BAX0 (Dihydropyrimidinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00660 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.8e-26
Identity = 62/76 (81.58%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 1  MWSSWFRCWRMLRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWR 60
          MWSS FRCWRML RRAPWVSVCKGV+E+ VA VE+QQTVVNS+ AARVAGRS TDDCW R
Sbjct: 1  MWSSIFRCWRMLLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRR 60

Query: 61 RVYWVYRESPELKKKH 77
          RV+ VY ESPELKKKH
Sbjct: 61 RVWRVYGESPELKKKH 76

The following BLAST results are available for this feature:

BLAST of MELO3C014553 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK10467.1	4.3e-53	99.01	protein EMSY-LIKE 3 isoform X2 [Cucumis melo var. makuwa]	[more]
KAA0058660.1	4.3e-53	99.01	protein EMSY-LIKE 3 isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0061762.1	2.0e-26	82.89	dihydropyrimidinase [Cucumis melo var. makuwa]	[more]
TYJ96104.1	5.8e-26	81.58	dihydropyrimidinase [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C014553 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C014553 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UUE7	2.1e-53	99.01	Protein EMSY-LIKE 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3CES2	2.1e-53	99.01	Protein EMSY-LIKE 3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7V0Q1	9.6e-27	82.89	Dihydropyrimidinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G...	[more]
A0A5D3BAX0	2.8e-26	81.58	Dihydropyrimidinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G...	[more]

BLAST of MELO3C014553 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C014553.1	MELO3C014553.1	mRNA