MELO3C014490.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C014490.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	tapetum determinant 1
Location	chr05: 2080880 .. 2081416 (-)
RNA-Seq Expression	MELO3C014490.jh1
Synteny	MELO3C014490.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATGGCGGCGGGTGTTATTGCAACTTCGTCTTTCTTCAGAGCTTCTCTTCTTTTATTCTTCCATCTCCTTTTACTTTCTTCCTTTATTTCCACCGAAGGTAACATTCTTCTACACCACCTTTTCTTTTTCTTTAATTATATATATGTTCAACATTCTATATACTAAAGTTGAAAGTACTAAAAGTATAATCAAACCTAATGATATGAATTAGGTGGAACATTAGAAAAGAAATGCGAAGGAAATTCGATAGCAATAAGCCAAGGACAAGAGAGCAGAATGTTCAATGGAATCCCAACGTATAGGGTGCAGATAACAAATCAGTGTTTAGACAAGTGCACCATATACGATCTTCATCTCAAATGTGGATCCTTCGTATCATCTAACTTAATAAATCCTCAAATCTTTAAAAGACTTACCGTCGACGATTGTCTTGTCAACAATGGATCGCCAATCGTCTATGGTGAAACTATTTCCTTTCAATATGCTACTACCTTTATGTTCCCTCTTTCCGTTTCTTCTTTTAAATGTTAA

mRNA sequence

ATGGCTATGGCGGCGGGTGTTATTGCAACTTCGTCTTTCTTCAGAGCTTCTCTTCTTTTATTCTTCCATCTCCTTTTACTTTCTTCCTTTATTTCCACCGAAGGTGGAACATTAGAAAAGAAATGCGAAGGAAATTCGATAGCAATAAGCCAAGGACAAGAGAGCAGAATGTTCAATGGAATCCCAACGTATAGGGTGCAGATAACAAATCAGTGTTTAGACAAGTGCACCATATACGATCTTCATCTCAAATGTGGATCCTTCGTATCATCTAACTTAATAAATCCTCAAATCTTTAAAAGACTTACCGTCGACGATTGTCTTGTCAACAATGGATCGCCAATCGTCTATGGTGAAACTATTTCCTTTCAATATGCTACTACCTTTATGTTCCCTCTTTCCGTTTCTTCTTTTAAATGTTAA

Coding sequence (CDS)

ATGGCTATGGCGGCGGGTGTTATTGCAACTTCGTCTTTCTTCAGAGCTTCTCTTCTTTTATTCTTCCATCTCCTTTTACTTTCTTCCTTTATTTCCACCGAAGGTGGAACATTAGAAAAGAAATGCGAAGGAAATTCGATAGCAATAAGCCAAGGACAAGAGAGCAGAATGTTCAATGGAATCCCAACGTATAGGGTGCAGATAACAAATCAGTGTTTAGACAAGTGCACCATATACGATCTTCATCTCAAATGTGGATCCTTCGTATCATCTAACTTAATAAATCCTCAAATCTTTAAAAGACTTACCGTCGACGATTGTCTTGTCAACAATGGATCGCCAATCGTCTATGGTGAAACTATTTCCTTTCAATATGCTACTACCTTTATGTTCCCTCTTTCCGTTTCTTCTTTTAAATGTTAA

Protein sequence

MAMAAGVIATSSFFRASLLLFFHLLLLSSFISTEGGTLEKKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIFKRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC

Homology

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BLAST of MELO3C014490.jh1 vs. NCBI nr
Match: XP_010535235.1 (PREDICTED: protein TAPETUM DETERMINANT 1-like [Tarenaya hassleriana] >XP_010535236.1 PREDICTED: protein TAPETUM DETERMINANT 1-like [Tarenaya hassleriana])

HSP 1 Score: 133 bits (335), Expect = 3.78e-37
Identity = 61/107 (57.01%), Postives = 79/107 (73.83%), Query Frame = 0


Query: 34  EGGTLEKKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNL 93
           EGG    +C  N+I ISQ     + NGIPT+RV+ITNQC+  C+I D+HL CG F S+ L
Sbjct: 25  EGGG---RCRKNNIVISQESTQPLPNGIPTFRVEITNQCVTGCSISDIHLNCGWFSSATL 84

Query: 94  INPQIFKRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 140
           I P +FKRL+ +DCLVN G P+ +G T+SFQYAT+F+FPLSVSS +C
Sbjct: 85  IRPNVFKRLSYNDCLVNGGQPLEFGHTVSFQYATSFLFPLSVSSVQC 128

[Close]

BLAST of MELO3C014490.jh1 vs. NCBI nr
Match: ESQ54814.1 (hypothetical protein EUTSA_v10027160mg, partial [Eutrema salsugineum])

HSP 1 Score: 129 bits (324), Expect = 1.20e-35
Identity = 57/101 (56.44%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 40  KKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIF 99
           +KC+G+ I ++Q     M NGIP YRV+ITNQC+  C I  +H+ CG F S+ LINP++F
Sbjct: 14  EKCKGSDIVVNQVATEPMPNGIPGYRVEITNQCMSGCKISRIHISCGWFSSAKLINPRLF 73

Query: 100 KRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 140
           KR+  DDCLVNNG P+ YG T+SFQYA TF +PLSVS   C
Sbjct: 74  KRIHYDDCLVNNGKPLPYGSTLSFQYANTFPYPLSVSFVTC 114

[Close]

BLAST of MELO3C014490.jh1 vs. NCBI nr
Match: XP_038893959.1 (protein TAPETUM DETERMINANT 1-like [Benincasa hispida] >XP_038893960.1 protein TAPETUM DETERMINANT 1-like [Benincasa hispida] >XP_038893961.1 protein TAPETUM DETERMINANT 1-like [Benincasa hispida] >XP_038893962.1 protein TAPETUM DETERMINANT 1-like [Benincasa hispida])

HSP 1 Score: 130 bits (327), Expect = 2.27e-35
Identity = 58/101 (57.43%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 40  KKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIF 99
           +KC  + I I+QG  + +  GIPTY V++ N C+  C IY +H KCG F S++LINP+IF
Sbjct: 71  EKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRIF 130

Query: 100 KRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 140
           KRL  DDCLVN+G P+VYG T+SFQYA TF +PLSVSS  C
Sbjct: 131 KRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVAC 171

[Close]

BLAST of MELO3C014490.jh1 vs. NCBI nr
Match: XP_021908952.1 (TPD1 protein homolog 1-like [Carica papaya] >XP_021908953.1 TPD1 protein homolog 1-like [Carica papaya])

HSP 1 Score: 130 bits (326), Expect = 3.13e-35
Identity = 62/117 (52.99%), Postives = 81/117 (69.23%), Query Frame = 0


Query: 24  LLLLSSFISTEGGTLEKKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHL 83
           LLLL + +    G + ++C  + + I+QG    + NGIPTY V+I N C+  C I ++HL
Sbjct: 54  LLLLETPMKQPEGIITERCYKSDLRINQGPTPPLPNGIPTYTVEIVNMCVTGCNISNIHL 113

Query: 84  KCGSFVSSNLINPQIFKRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 140
           KCG F S  LINP IFKRL+ DDCLVN+G+P+V G T+ FQYA TFM+PLSVSS  C
Sbjct: 114 KCGWFSSVRLINPTIFKRLSYDDCLVNDGNPLVGGATMDFQYANTFMYPLSVSSLVC 170

[Close]

BLAST of MELO3C014490.jh1 vs. NCBI nr
Match: XP_015579392.1 (protein TAPETUM DETERMINANT 1-like [Ricinus communis])

HSP 1 Score: 129 bits (325), Expect = 5.11e-35
Identity = 57/101 (56.44%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 40  KKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIF 99
           + C    I I+QG  + + NGIPTY VQITN C+  C I  +H++CG F S+ LINP+IF
Sbjct: 76  ESCTSADIVINQGSTTSLPNGIPTYTVQITNICVTGCDISGIHIRCGWFSSARLINPKIF 135

Query: 100 KRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 140
           KRL  DDCLVNNG P++YG TISF+Y+ T+++PLSVSS  C
Sbjct: 136 KRLRYDDCLVNNGKPLIYGGTISFEYSNTYLYPLSVSSVLC 176

[Close]

BLAST of MELO3C014490.jh1 vs. ExPASy Swiss-Prot
Match: Q6TLJ2 (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 5.6e-26
Identity = 53/109 (48.62%), Postives = 71/109 (65.14%), Query Frame = 0


Query: 32  STEGGTLEKKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSS 91
           S E   + +KC+   I ++Q     M NGIP Y V+ITNQC+  C I  +H+ CG F S+
Sbjct: 67  SVEPERIGEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSA 126

Query: 92  NLINPQIFKRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 141
            LINP++FKR+  DDCLVNNG P+ +G T+SF YA TF + LSV+   C
Sbjct: 127 KLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFVTC 175

[Close]

BLAST of MELO3C014490.jh1 vs. ExPASy Swiss-Prot
Match: Q1G3T1 (TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.3e-24
Identity = 50/116 (43.10%), Postives = 76/116 (65.52%), Query Frame = 0


Query: 25  LLLSSFISTEGGTLEKKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLK 84
           LLLS  I      + + C  + I + QG  + + +G+P+Y V+I N C+  C I ++H+ 
Sbjct: 63  LLLSPDIGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVS 122

Query: 85  CGSFVSSNLINPQIFKRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 141
           CG F S  L+NP++F+RL  DDCLVN+G P+  G+++SFQYA +F +PLSV+S  C
Sbjct: 123 CGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVASVSC 178

[Close]

BLAST of MELO3C014490.jh1 vs. ExPASy Swiss-Prot
Match: Q2QR54 (TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.7e-19
Identity = 48/128 (37.50%), Postives = 78/128 (60.94%), Query Frame = 0


Query: 30  FISTEGG----------TLEKKCEG-NSIAISQGQESRMFNGIPTYRVQITNQCL----- 89
           F+S  GG           ++  C G + IAI QG+ + + +G+P Y V + N+C      
Sbjct: 92  FVSGSGGGGGGDGVRTRRVDDGCAGADDIAIYQGRATPLPSGVPAYTVDVMNRCAGGGGG 151

Query: 90  -DKCTIYDLHLKCGSFVSSNLINPQIFKRLTVDDCLVNNGSPIVYGETISFQYATTFMFP 141
            ++C I  +H++CG F S +L++P++F+RL  DDCL+N+G P++ GET+SF+Y  +F + 
Sbjct: 152 DEECAIAGIHVRCGWFSSVSLVDPRVFRRLGHDDCLLNDGRPLLAGETVSFEYTNSFPYK 211

[Close]

BLAST of MELO3C014490.jh1 vs. ExPASy Swiss-Prot
Match: Q8S6P9 (TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.5e-18
Identity = 48/138 (34.78%), Postives = 76/138 (55.07%), Query Frame = 0


Query: 9   ATSSFFRASLLLFFHLLLLSSFISTEGG------TLEKKCEGNSIAISQGQESRMFNGIP 68
           ++SS  ++  L    LL +S   S  GG           C   ++ + Q     + +GIP
Sbjct: 32  SSSSAMQSKTLNMNKLLNISEDHSPNGGRHWMQRMQPDSCSEQNVVVYQNNAEHLPSGIP 91

Query: 69  TYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIFKRLTVDDCLVNNGSPIVYGETIS 128
           TY V+I N C   CT+YD+H+ CG F S+ L++P  F+R+  +DCLV  G  +   E +S
Sbjct: 92  TYSVEIINVC-TACTVYDVHISCGEFASAELVDPSQFQRIGFNDCLVKGGGRLGPSEAVS 151

Query: 129 FQYATTFMFPLSVSSFKC 141
           FQY+ +F +PL+V++  C
Sbjct: 152 FQYSNSFAYPLAVANVAC 168

[Close]

BLAST of MELO3C014490.jh1 vs. ExPASy Swiss-Prot
Match: A8MS78 (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.8e-07
Identity = 37/104 (35.58%), Postives = 56/104 (53.85%), Query Frame = 0


Query: 42  CEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIFKR 101
           CEG S   +  Q    +     +RV++ N+C   C I +L LKC  F  S L++P   + 
Sbjct: 26  CEGKSSEPAVRQTQVKWREGKKFRVEVMNKC-PMCPIINLRLKCQGFPQS-LVDPTFLRV 85

Query: 102 L--TVDDCLVNNGSPIVYGETISFQYATTFMF---PLSVSSFKC 141
           L  +  +C+VN+G P+   +T+SF Y+ T  F   PLS  SF+C
Sbjct: 86  LSSSAGNCVVNDGLPLSPMQTLSFNYSNTHQFALRPLS-WSFQC 126

[Close]

BLAST of MELO3C014490.jh1 vs. ExPASy TrEMBL
Match: V4MEA8 (Uncharacterized protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10027160mg PE=4 SV=1)

HSP 1 Score: 129 bits (324), Expect = 5.79e-36
Identity = 57/101 (56.44%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 40  KKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIF 99
           +KC+G+ I ++Q     M NGIP YRV+ITNQC+  C I  +H+ CG F S+ LINP++F
Sbjct: 14  EKCKGSDIVVNQVATEPMPNGIPGYRVEITNQCMSGCKISRIHISCGWFSSAKLINPRLF 73

Query: 100 KRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 140
           KR+  DDCLVNNG P+ YG T+SFQYA TF +PLSVS   C
Sbjct: 74  KRIHYDDCLVNNGKPLPYGSTLSFQYANTFPYPLSVSFVTC 114

[Close]

BLAST of MELO3C014490.jh1 vs. ExPASy TrEMBL
Match: A0A6J1C7I8 (protein TAPETUM DETERMINANT 1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009090 PE=4 SV=1)

HSP 1 Score: 129 bits (325), Expect = 3.11e-35
Identity = 57/101 (56.44%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 40  KKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIF 99
           +KC  + I I+QG  + +  GIPTY V++ N C+  C IY +H KCG F S++LINP++F
Sbjct: 83  EKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVF 142

Query: 100 KRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 140
           KRL  DDCLVN+G P+VYG T+SFQYA TF +PLSVSS  C
Sbjct: 143 KRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 183

[Close]

BLAST of MELO3C014490.jh1 vs. ExPASy TrEMBL
Match: A0A6J1C840 (protein TAPETUM DETERMINANT 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009090 PE=4 SV=1)

HSP 1 Score: 129 bits (325), Expect = 3.20e-35
Identity = 57/101 (56.44%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 40  KKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIF 99
           +KC  + I I+QG  + +  GIPTY V++ N C+  C IY +H KCG F S++LINP++F
Sbjct: 84  EKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVF 143

Query: 100 KRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 140
           KRL  DDCLVN+G P+VYG T+SFQYA TF +PLSVSS  C
Sbjct: 144 KRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 184

[Close]

BLAST of MELO3C014490.jh1 vs. ExPASy TrEMBL
Match: A0A1S3B0P8 (protein TAPETUM DETERMINANT 1 OS=Cucumis melo OX=3656 GN=LOC103484600 PE=4 SV=1)

HSP 1 Score: 128 bits (322), Expect = 8.34e-35
Identity = 56/101 (55.45%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 40  KKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIF 99
           +KC  + I I+QG  + +  GIPTY V++ N C+  C IY +H KCG F S++LINP++F
Sbjct: 81  EKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVF 140

Query: 100 KRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 140
           KRL  DDCLVN+G P+VYG T+SFQYA T+ +PLSVSS  C
Sbjct: 141 KRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVLC 181

[Close]

BLAST of MELO3C014490.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UPF3 (Protein TAPETUM DETERMINANT 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G001940 PE=4 SV=1)

HSP 1 Score: 128 bits (322), Expect = 8.34e-35
Identity = 56/101 (55.45%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 40  KKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIF 99
           +KC  + I I+QG  + +  GIPTY V++ N C+  C IY +H KCG F S++LINP++F
Sbjct: 81  EKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCEIYGIHFKCGWFSSAHLINPRVF 140

Query: 100 KRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 140
           KRL  DDCLVN+G P+VYG T+SFQYA T+ +PLSVSS  C
Sbjct: 141 KRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVLC 181

[Close]

BLAST of MELO3C014490.jh1 vs. TAIR 10
Match: AT4G24972.1 (tapetum determinant 1 )

HSP 1 Score: 118.6 bits (296), Expect = 4.0e-27
Identity = 53/109 (48.62%), Postives = 71/109 (65.14%), Query Frame = 0


Query: 32  STEGGTLEKKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSS 91
           S E   + +KC+   I ++Q     M NGIP Y V+ITNQC+  C I  +H+ CG F S+
Sbjct: 67  SVEPERIGEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSA 126

Query: 92  NLINPQIFKRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 141
            LINP++FKR+  DDCLVNNG P+ +G T+SF YA TF + LSV+   C
Sbjct: 127 KLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFVTC 175

[Close]

BLAST of MELO3C014490.jh1 vs. TAIR 10
Match: AT1G32583.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: tapetum determinant 1 (TAIR:AT4G24972.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 113.2 bits (282), Expect = 1.7e-25
Identity = 50/116 (43.10%), Postives = 76/116 (65.52%), Query Frame = 0


Query: 25  LLLSSFISTEGGTLEKKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLK 84
           LLLS  I      + + C  + I + QG  + + +G+P+Y V+I N C+  C I ++H+ 
Sbjct: 63  LLLSPDIGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVS 122

Query: 85  CGSFVSSNLINPQIFKRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSVSSFKC 141
           CG F S  L+NP++F+RL  DDCLVN+G P+  G+++SFQYA +F +PLSV+S  C
Sbjct: 123 CGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVASVSC 178

[Close]

BLAST of MELO3C014490.jh1 vs. TAIR 10
Match: AT1G05835.1 (PHD finger protein )

HSP 1 Score: 55.5 bits (132), Expect = 4.1e-08
Identity = 37/104 (35.58%), Postives = 56/104 (53.85%), Query Frame = 0


Query: 42  CEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHLKCGSFVSSNLINPQIFKR 101
           CEG S   +  Q    +     +RV++ N+C   C I +L LKC  F  S L++P   + 
Sbjct: 26  CEGKSSEPAVRQTQVKWREGKKFRVEVMNKC-PMCPIINLRLKCQGFPQS-LVDPTFLRV 85

Query: 102 L--TVDDCLVNNGSPIVYGETISFQYATTFMF---PLSVSSFKC 141
           L  +  +C+VN+G P+   +T+SF Y+ T  F   PLS  SF+C
Sbjct: 86  LSSSAGNCVVNDGLPLSPMQTLSFNYSNTHQFALRPLS-WSFQC 126

[Close]

BLAST of MELO3C014490.jh1 vs. TAIR 10
Match: AT4G32110.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein )

HSP 1 Score: 48.1 bits (113), Expect = 6.6e-06
Identity = 33/112 (29.46%), Postives = 53/112 (47.32%), Query Frame = 0


Query: 24  LLLLSSFISTEGGTLEKKCEGNSIAISQGQESRMFNGIPTYRVQITNQCLDKCTIYDLHL 83
           L+L  +F++   G     C  NS+++ Q +  ++    P + V++TN C + C   +  L
Sbjct: 11  LVLFLAFVNQGYG----DCSLNSLSVKQSKTGKLVQNKPEWEVRVTNPC-NNCKFQNTEL 70

Query: 84  KCGSFVSSNLINPQIFKRLTVDDCLVNNGSPIVYGETISFQYATTFMFPLSV 136
            C  F S   I+  +  + + D CLVN G  IV    I F+Y     F L V
Sbjct: 71  LCVGFNSVTPIDTSLLLK-SGDACLVNAGKFIVPHVDIVFKYVWDTSFDLKV 116

The following BLAST results are available for this feature:

BLAST of MELO3C014490.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_010535235.1	3.78e-37	57.01	PREDICTED: protein TAPETUM DETERMINANT 1-like [Tarenaya hassleriana] >XP_0105352...	[more]
ESQ54814.1	1.20e-35	56.44	hypothetical protein EUTSA_v10027160mg, partial [Eutrema salsugineum]	[more]
XP_038893959.1	2.27e-35	57.43	protein TAPETUM DETERMINANT 1-like [Benincasa hispida] >XP_038893960.1 protein T...	[more]
XP_021908952.1	3.13e-35	52.99	TPD1 protein homolog 1-like [Carica papaya] >XP_021908953.1 TPD1 protein homolog...	[more]
XP_015579392.1	5.11e-35	56.44	protein TAPETUM DETERMINANT 1-like [Ricinus communis]	[more]

BLAST of MELO3C014490.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6TLJ2	5.6e-26	48.62	Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1	[more]
Q1G3T1	2.3e-24	43.10	TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1	[more]
Q2QR54	1.7e-19	37.50	TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 S...	[more]
Q8S6P9	2.5e-18	34.78	TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 S...	[more]
A8MS78	5.8e-07	35.58	Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 P...	[more]

BLAST of MELO3C014490.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
V4MEA8	5.79e-36	56.44	Uncharacterized protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v100...	[more]
A0A6J1C7I8	3.11e-35	56.44	protein TAPETUM DETERMINANT 1-like isoform X2 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1C840	3.20e-35	56.44	protein TAPETUM DETERMINANT 1-like isoform X1 OS=Momordica charantia OX=3673 GN=...	[more]
A0A1S3B0P8	8.34e-35	55.45	protein TAPETUM DETERMINANT 1 OS=Cucumis melo OX=3656 GN=LOC103484600 PE=4 SV=1	[more]
A0A5A7UPF3	8.34e-35	55.45	Protein TAPETUM DETERMINANT 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]

BLAST of MELO3C014490.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24972.1	4.0e-27	48.62	tapetum determinant 1	[more]
AT1G32583.1	1.7e-25	43.10	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G05835.1	4.1e-08	35.58	PHD finger protein	[more]
AT4G32110.1	6.6e-06	29.46	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040361	Tapetum determinant 1	PANTHER	PTHR33184	PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED	coord: 26..140
None	No IPR available	PANTHER	PTHR33184:SF67	PROTEIN TAPETUM DETERMINANT 1	coord: 26..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C014490.jh1.t1	MELO3C014490.jh1.t1	mRNA