MELO3C014425.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C014425.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr05: 2596977 .. 2597724 (+)
RNA-Seq ExpressionMELO3C014425.jh1
SyntenyMELO3C014425.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCAAAAACAAAAAATCTCCCTCTTCTTCTCCGACCAAAATTTTCATTTTCATTTTCACCTTCAAATTCCAAATTCCTTCAAATCCAAAACCCCCAATCTTCAAAGCAAAAATGTTTCCCTTTTCAATTCCCACCAGAATCTCTTCCATTTTTCATCCTCACTATAAACACCCATTTTCCCCTTTCCTCTCCCAACCCGGCTTCACTTCTCATTCTCATTCCTTCTTCCCCGTCTTCCATGGAGTTTGCCGCCGTCCGTTTCCATTCCGATAAGGAAAACCTCCCCCCGTTTACCCATAAGTTACACCCTTCAATTCCAAAGAAACCCATCATACGAAGGAGATTAAATCGGAAGCCGCTTCAAGATATAACCAATTCATTTGAAAATACTATTCGATTCGGTTCGATTCAAGATGGATTTATCGCCTCGGTTGAATCGGTTTGTTTGCAGTCAAATTCCAGGAAGAGGAAAGCTGTGGATGAAGTTTTTTCTGGAACTGCCAAATCGCTCAGAATGGGATTCAGATAACCGTTCTTAATTTCCATTTCTTTTATAGAAATTAGATTGTAGATTTACAGCAATTGATCTTATTTTAACATCTTTTGGGTTCTTGGAAATAGAGCAATTCTTGATACATGATTCTGGGTCATTGCTAGATTTAAGTTGTTGGGCAATGAGTAATGGTTTCTGTGGTTAAATCTCTAAACCAAAACAGAGTTTATATAAGACTGTGATTCTTTCTTGA

mRNA sequence

CTTTCAAAAACAAAAAATCTCCCTCTTCTTCTCCGACCAAAATTTTCATTTTCATTTTCACCTTCAAATTCCAAATTCCTTCAAATCCAAAACCCCCAATCTTCAAAGCAAAAATGTTTCCCTTTTCAATTCCCACCAGAATCTCTTCCATTTTTCATCCTCACTATAAACACCCATTTTCCCCTTTCCTCTCCCAACCCGGCTTCACTTCTCATTCTCATTCCTTCTTCCCCGTCTTCCATGGAGTTTGCCGCCGTCCGTTTCCATTCCGATAAGGAAAACCTCCCCCCGTTTACCCATAAGTTACACCCTTCAATTCCAAAGAAACCCATCATACGAAGGAGATTAAATCGGAAGCCGCTTCAAGATATAACCAATTCATTTGAAAATACTATTCGATTCGGTTCGATTCAAGATGGATTTATCGCCTCGGTTGAATCGGTTTGTTTGCAGTCAAATTCCAGGAAGAGGAAAGCTGTGGATGAAGTTTTTTCTGGAACTGCCAAATCGCTCAGAATGGGATTCAGATAACCGTTCTTAATTTCCATTTCTTTTATAGAAATTAGATTGTAGATTTACAGCAATTGATCTTATTTTAACATCTTTTGGGTTCTTGGAAATAGAGCAATTCTTGATACATGATTCTGGGTCATTGCTAGATTTAAGTTGTTGGGCAATGAGTAATGGTTTCTGTGGTTAAATCTCTAAACCAAAACAGAGTTTATATAAGACTGTGATTCTTTCTTGA

Coding sequence (CDS)

ATGGAGTTTGCCGCCGTCCGTTTCCATTCCGATAAGGAAAACCTCCCCCCGTTTACCCATAAGTTACACCCTTCAATTCCAAAGAAACCCATCATACGAAGGAGATTAAATCGGAAGCCGCTTCAAGATATAACCAATTCATTTGAAAATACTATTCGATTCGGTTCGATTCAAGATGGATTTATCGCCTCGGTTGAATCGGTTTGTTTGCAGTCAAATTCCAGGAAGAGGAAAGCTGTGGATGAAGTTTTTTCTGGAACTGCCAAATCGCTCAGAATGGGATTCAGATAA

Protein sequence

MEFAAVRFHSDKENLPPFTHKLHPSIPKKPIIRRRLNRKPLQDITNSFENTIRFGSIQDGFIASVESVCLQSNSRKRKAVDEVFSGTAKSLRMGFR
Homology
BLAST of MELO3C014425.jh1 vs. NCBI nr
Match: KGN47955.1 (hypothetical protein Csa_002785 [Cucumis sativus])

HSP 1 Score: 177 bits (449), Expect = 7.24e-55
Identity = 88/96 (91.67%), Postives = 91/96 (94.79%), Query Frame = 0

Query: 1   MEFAAVRFHSDKENLPPFTHKLHPSIPKKPIIRRRLNRKPLQDITNSFENTIRFGSIQDG 60
           MEF+AVRFHSDKENLPPFTHKL+PSIPKKP IRRRLNRKPL DITNSFENTIR GSIQDG
Sbjct: 61  MEFSAVRFHSDKENLPPFTHKLYPSIPKKPTIRRRLNRKPLLDITNSFENTIRLGSIQDG 120

Query: 61  FIASVESVCLQSNSRKRKAVDEVFSGTAKSLRMGFR 96
           FIASVESVCLQ NSRKRKA DEV+SGTAKSLRMGFR
Sbjct: 121 FIASVESVCLQPNSRKRKAGDEVYSGTAKSLRMGFR 156

BLAST of MELO3C014425.jh1 vs. NCBI nr
Match: KAG6589263.1 (hypothetical protein SDJN03_17828, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 127 bits (320), Expect = 4.91e-36
Identity = 68/96 (70.83%), Postives = 75/96 (78.12%), Query Frame = 0

Query: 1  MEFAAVRFHSDKENLPPFTHKLHPSIPKKPIIRRRLNRKPLQDITNSFENTIRFGSIQDG 60
          MEFAAVRF S KENLP  + K  P   KKPI RRRLNRKPL DITNSFE+++RF  +QD 
Sbjct: 1  MEFAAVRFPSGKENLPLLSQKQFPPNQKKPITRRRLNRKPLADITNSFESSVRFSFVQD- 60

Query: 61 FIASVESVCLQSNSRKRKAVDEVFSGTAKSLRMGFR 96
             SVESVCLQ NS+KRKA DE+ SGTAKSLRMGFR
Sbjct: 61 HSGSVESVCLQLNSKKRKAADEICSGTAKSLRMGFR 95

BLAST of MELO3C014425.jh1 vs. NCBI nr
Match: GAV75989.1 (hypothetical protein CFOL_v3_19465, partial [Cephalotus follicularis])

HSP 1 Score: 62.8 bits (151), Expect = 3.28e-10
Identity = 46/107 (42.99%), Postives = 59/107 (55.14%), Query Frame = 0

Query: 1   MEFAAVRFHSDKENLPPFTHKLH-------PSIPKKPIIRRRLNRKPLQDITNSFENTIR 60
           ME   +  + +KEN+PPF+ K         PS  K P  +RR  RKPL DITN F N++ 
Sbjct: 8   MEAITLSDNYNKENIPPFSPKQANPVPVNAPSFKKIPTCKRRF-RKPLADITNLFNNSVS 67

Query: 61  FGSIQDGFIASVES----VCLQSNSRKRKAVDEVFSGTAKSLRMGFR 96
             S Q+     + S    VC   N+RKRKAV    S ++KSLRMGFR
Sbjct: 68  SSSTQESISLLLSSPPVSVCAP-NARKRKAVG---SSSSKSLRMGFR 109

BLAST of MELO3C014425.jh1 vs. NCBI nr
Match: KAG5545157.1 (hypothetical protein RHGRI_017584 [Rhododendron griersonianum])

HSP 1 Score: 59.3 bits (142), Expect = 7.07e-09
Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = 0

Query: 9   HSDKENLPPFT-HKLHPSIP-----KKPIIRRRLNRKPLQDITNSFENTIRFGSIQD--G 68
           H+DKEN+PPF  +++HP+ P          +RRL R+PL+DIT+ F + I+  S QD  G
Sbjct: 10  HNDKENIPPFAQNQIHPAPPLVQTCSAKNAKRRL-RRPLRDITHLFNSQIQSNSAQDTTG 69

Query: 69  FIASVESVCLQSNSRKRKAVDEVFSG---TAKSLRMGFR 96
           F           N RKRKA+D++ S     +KSLRM FR
Sbjct: 70  FQLPSPVPAPALNFRKRKAIDDIDSMHQMNSKSLRMNFR 107

BLAST of MELO3C014425.jh1 vs. NCBI nr
Match: CAB4273203.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 59.3 bits (142), Expect = 9.47e-09
Identity = 51/120 (42.50%), Postives = 62/120 (51.67%), Query Frame = 0

Query: 1   MEFAAVRFHSDKENLPPFTHKLHPSIP--------KKPIIRRRLNRKPLQDITNSF--EN 60
           ME +A R+HS+KENLPP +   + + P        KK   + RL RKPL DITN +   N
Sbjct: 1   MEASACRYHSNKENLPPSSAMANLTNPVPENGSSSKKCNKKTRLRRKPLADITNLYIYGN 60

Query: 61  TIRFG------SIQDGFIASVESVC-LQSNSRKRKAVDE-------VFSGTAKSLRMGFR 96
              FG      S    F +S  SV    SNSRKRK+  E       V S  +KSLRMGFR
Sbjct: 61  QSSFGLSDHLPSATLPFSSSSSSVSGSASNSRKRKSTQEDNTNSSKVNSSNSKSLRMGFR 120

BLAST of MELO3C014425.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KE31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G419520 PE=4 SV=1)

HSP 1 Score: 177 bits (449), Expect = 3.50e-55
Identity = 88/96 (91.67%), Postives = 91/96 (94.79%), Query Frame = 0

Query: 1   MEFAAVRFHSDKENLPPFTHKLHPSIPKKPIIRRRLNRKPLQDITNSFENTIRFGSIQDG 60
           MEF+AVRFHSDKENLPPFTHKL+PSIPKKP IRRRLNRKPL DITNSFENTIR GSIQDG
Sbjct: 61  MEFSAVRFHSDKENLPPFTHKLYPSIPKKPTIRRRLNRKPLLDITNSFENTIRLGSIQDG 120

Query: 61  FIASVESVCLQSNSRKRKAVDEVFSGTAKSLRMGFR 96
           FIASVESVCLQ NSRKRKA DEV+SGTAKSLRMGFR
Sbjct: 121 FIASVESVCLQPNSRKRKAGDEVYSGTAKSLRMGFR 156

BLAST of MELO3C014425.jh1 vs. ExPASy TrEMBL
Match: A0A1Q3C6Z4 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_19465 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.59e-10
Identity = 46/107 (42.99%), Postives = 59/107 (55.14%), Query Frame = 0

Query: 1   MEFAAVRFHSDKENLPPFTHKLH-------PSIPKKPIIRRRLNRKPLQDITNSFENTIR 60
           ME   +  + +KEN+PPF+ K         PS  K P  +RR  RKPL DITN F N++ 
Sbjct: 8   MEAITLSDNYNKENIPPFSPKQANPVPVNAPSFKKIPTCKRRF-RKPLADITNLFNNSVS 67

Query: 61  FGSIQDGFIASVES----VCLQSNSRKRKAVDEVFSGTAKSLRMGFR 96
             S Q+     + S    VC   N+RKRKAV    S ++KSLRMGFR
Sbjct: 68  SSSTQESISLLLSSPPVSVCAP-NARKRKAVG---SSSSKSLRMGFR 109

BLAST of MELO3C014425.jh1 vs. ExPASy TrEMBL
Match: A0A6J5UAF7 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS20443 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.59e-09
Identity = 51/120 (42.50%), Postives = 62/120 (51.67%), Query Frame = 0

Query: 1   MEFAAVRFHSDKENLPPFTHKLHPSIP--------KKPIIRRRLNRKPLQDITNSF--EN 60
           ME +A R+HS+KENLPP +   + + P        KK   + RL RKPL DITN +   N
Sbjct: 1   MEASACRYHSNKENLPPSSAMANLTNPVPENGSSSKKCNKKTRLRRKPLADITNLYIYGN 60

Query: 61  TIRFG------SIQDGFIASVESVC-LQSNSRKRKAVDE-------VFSGTAKSLRMGFR 96
              FG      S    F +S  SV    SNSRKRK+  E       V S  +KSLRMGFR
Sbjct: 61  QSSFGLSDHLPSATLPFSSSSSSVSGSASNSRKRKSTQEDNTNSSKVNSSNSKSLRMGFR 120

BLAST of MELO3C014425.jh1 vs. ExPASy TrEMBL
Match: A0A2K3JL70 (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g048400 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.24e-09
Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 0

Query: 1   MEFAAVRFHSDKENLPPFTHKLHPSIP---KKPIIRRRLNRKPLQDITNSFENTIRFGSI 60
           M+ + +   ++KEN+PP      P I    KK    R++ R PL DITN F+N+  F   
Sbjct: 1   MKISTMSIQTNKENIPPVNKNSIPLIASSFKKNSSNRKIKRIPLADITNLFQNSSPFTMT 60

Query: 61  QDGF-IASV---ESVCLQSNSRKRKAVDEVFSGTAKSLRMGFR 96
            +G  ++SV    S+ L+SNSR+R  V    +  +K+LRMGFR
Sbjct: 61  PEGNGVSSVLPSASILLRSNSRRRTLVVVAQATVSKTLRMGFR 103

BLAST of MELO3C014425.jh1 vs. ExPASy TrEMBL
Match: A0A2C9URL6 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G138400 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.46e-08
Identity = 45/111 (40.54%), Postives = 61/111 (54.95%), Query Frame = 0

Query: 1   MEFAA--VRFHSDKENLPPFTHKLHPSIP-----KKPIIRRRLNRKPLQDITNSFENTIR 60
           MEF A     HS+KEN+PPF+ K    IP      K   RRR+ R+PL+DIT  + ++++
Sbjct: 1   MEFTAKLCDHHSNKENIPPFSAKPANPIPASVASSKKKFRRRI-REPLEDITYFYRSSVQ 60

Query: 61  FGSIQDGFIASVESVC-LQSNSRKRKAVDE-------VFSGTAKSLRMGFR 96
               Q+    S  SV    SNS+KRKA D+       V   ++KSLR GFR
Sbjct: 61  LALAQEDDSLSAISVSGSASNSKKRKASDQENEDTGAVAGPSSKSLRFGFR 110

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN47955.17.24e-5591.67hypothetical protein Csa_002785 [Cucumis sativus][more]
KAG6589263.14.91e-3670.83hypothetical protein SDJN03_17828, partial [Cucurbita argyrosperma subsp. sorori... [more]
GAV75989.13.28e-1042.99hypothetical protein CFOL_v3_19465, partial [Cephalotus follicularis][more]
KAG5545157.17.07e-0942.42hypothetical protein RHGRI_017584 [Rhododendron griersonianum][more]
CAB4273203.19.47e-0942.50unnamed protein product [Prunus armeniaca][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KE313.50e-5591.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G419520 PE=4 SV=1[more]
A0A1Q3C6Z41.59e-1042.99Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3... [more]
A0A6J5UAF74.59e-0942.50Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS20443 PE=4 S... [more]
A0A2K3JL706.24e-0937.86Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g048400 PE=4 SV=1[more]
A0A2C9URL61.46e-0840.54Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G138400 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C014425.jh1.t1MELO3C014425.jh1.t1mRNA