MELO3C014251.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C014251.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionDUF4283 domain-containing protein
Locationchr08: 30670472 .. 30671121 (+)
RNA-Seq ExpressionMELO3C014251.jh1
SyntenyMELO3C014251.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGTGTCACAAGGTAGCTCATCAGATACTGACTCCCCTAAGTTCCTCAAAGCTGAAAAAAGAAGTACGAGAATTATTGATCCTAAATGTGAAAAAGAAGCTACCTTTGATTGGAACAAAATTGTGGTTCTAACAAGGAGATATTTCCACAATGACTGGAGGAAAATTATAGTGAAACTCAAAGAGCAACTTGATACGAATCTGTCGTATCAGCCCTTTCACGCTGACAAAGCCTTGATTTTCATTAAGGATAAATCACTGGTAAGGCTCCTATGTAAGAACAGAGGATGGTCCACGGTTGGAAACGTTGATGTAAAATTTGAAGAATGGAATCATGCTATTCATGCTATGCCAAGACTTATGTCCAGTTATGGTGGATGGACGAAGTTTCGAGGAATCCCTCTGCATGCTTGGAATTTAAACACCTTCACACAGATAAGGAATGCTTGCGGTGGATTTATGGAAGTCACTCGGGAAACCAGAAACAAAGTTGATCTTATTGAGGCTGTAACCAAGATCAAATATAATTACACAGTTTTTATTCCGGCCACTATCAGTGTCTCTGACGATAAGGGAAACAAATTCTTGGTACAGACTGTTGTTAAGGCTGAAGGGAGATGGCTAAAAGAAAGGAGTCCGAGGATACACTGA

mRNA sequence

TGGTGTCACAAGGTAGCTCATCAGATACTGACTCCCCTAAGTTCCTCAAAGCTGAAAAAAGAAGTACGAGAATTATTGATCCTAAATGTGAAAAAGAAGCTACCTTTGATTGGAACAAAATTGTGGTTCTAACAAGGAGATATTTCCACAATGACTGGAGGAAAATTATAGTGAAACTCAAAGAGCAACTTGATACGAATCTGTCGTATCAGCCCTTTCACGCTGACAAAGCCTTGATTTTCATTAAGGATAAATCACTGGTAAGGCTCCTATGTAAGAACAGAGGATGGTCCACGGTTGGAAACGTTGATGTAAAATTTGAAGAATGGAATCATGCTATTCATGCTATGCCAAGACTTATGTCCAGTTATGGTGGATGGACGAAGTTTCGAGGAATCCCTCTGCATGCTTGGAATTTAAACACCTTCACACAGATAAGGAATGCTTGCGGTGGATTTATGGAAGTCACTCGGGAAACCAGAAACAAAGTTGATCTTATTGAGGCTGTAACCAAGATCAAATATAATTACACAGTTTTTATTCCGGCCACTATCAGTGTCTCTGACGATAAGGGAAACAAATTCTTGGTACAGACTGTTGTTAAGGCTGAAGGGAGATGGCTAAAAGAAAGGAGTCCGAGGATACACTGA

Coding sequence (CDS)

ATGCCAAGACTTATGTCCAGTTATGGTGGATGGACGAAGTTTCGAGGAATCCCTCTGCATGCTTGGAATTTAAACACCTTCACACAGATAAGGAATGCTTGCGGTGGATTTATGGAAGTCACTCGGGAAACCAGAAACAAAGTTGATCTTATTGAGGCTGTAACCAAGATCAAATATAATTACACAGTTTTTATTCCGGCCACTATCAGTGTCTCTGACGATAAGGGAAACAAATTCTTGGTACAGACTGTTGTTAAGGCTGAAGGGAGATGGCTAAAAGAAAGGAGTCCGAGGATACACTGA

Protein sequence

MPRLMSSYGGWTKFRGIPLHAWNLNTFTQIRNACGGFMEVTRETRNKVDLIEAVTKIKYNYTVFIPATISVSDDKGNKFLVQTVVKAEGRWLKERSPRIH
Homology
BLAST of MELO3C014251.jh1 vs. NCBI nr
Match: KAA0047273.1 (mitotic spindle checkpoint protein mad1 [Cucumis melo var. makuwa])

HSP 1 Score: 207 bits (526), Expect = 4.85e-64
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0

Query: 1   MPRLMSSYGGWTKFRGIPLHAWNLNTFTQIRNACGGFMEVTRETRNKVDLIEAVTKIKYN 60
           MPRLMSSYGGWTKFRGIPLHAWNLNTFTQIRNACGGFMEVTRETRNKVDLIEAV KIKYN
Sbjct: 243 MPRLMSSYGGWTKFRGIPLHAWNLNTFTQIRNACGGFMEVTRETRNKVDLIEAVIKIKYN 302

Query: 61  YTVFIPATISVSDDKGNKFLVQTVVKAEGRWLKERSPRIH 100
           YTVFIPATISVSDDKGNKFLVQTVVKAEGRWLKERSPRIH
Sbjct: 303 YTVFIPATISVSDDKGNKFLVQTVVKAEGRWLKERSPRIH 342

BLAST of MELO3C014251.jh1 vs. NCBI nr
Match: KAA0057199.1 (hypothetical protein E6C27_scaffold280G00320 [Cucumis melo var. makuwa] >TYK18763.1 hypothetical protein E5676_scaffold257G00670 [Cucumis melo var. makuwa])

HSP 1 Score: 134 bits (337), Expect = 1.71e-36
Identity = 59/98 (60.20%), Postives = 78/98 (79.59%), Query Frame = 0

Query: 3   RLMSSYGGWTKFRGIPLHAWNLNTFTQIRNACGGFMEVTRETRNKVDLIEAVTKIKYNYT 62
           +L+ SYGGW +FRGIPLHAW  +TF QIR ACGG + V ++TR+K+D+IEA  K+ +NYT
Sbjct: 147 KLIPSYGGWKRFRGIPLHAWKQSTFKQIREACGGSLVVAKDTRDKIDIIEANIKVHFNYT 206

Query: 63  VFIPATISVSDDKGNKFLVQTVVKAEGRWLKERSPRIH 100
            FI ATI + DD+GN+FLV ++  +EGRWL ER+PRIH
Sbjct: 207 GFILATIIIIDDEGNRFLVHSIFHSEGRWLIERNPRIH 244

BLAST of MELO3C014251.jh1 vs. NCBI nr
Match: KAA0044557.1 (hypothetical protein E6C27_scaffold46G003060 [Cucumis melo var. makuwa])

HSP 1 Score: 134 bits (338), Expect = 2.57e-34
Identity = 57/98 (58.16%), Postives = 77/98 (78.57%), Query Frame = 0

Query: 3   RLMSSYGGWTKFRGIPLHAWNLNTFTQIRNACGGFMEVTRETRNKVDLIEAVTKIKYNYT 62
           +++ SYGGWT+FRGIPLH WNLNTF QI  ACGGF++   E+ NK++L EA+ K+K NYT
Sbjct: 275 KVIPSYGGWTRFRGIPLHIWNLNTFIQIGEACGGFIDAAPESVNKIELTEALIKVKENYT 334

Query: 63  VFIPATISVSDDKGNKFLVQTVVKAEGRWLKERSPRIH 100
            F+PA I + D++G+ F++QTV   EGRWL+ER+P IH
Sbjct: 335 GFLPAFIQIHDEEGHVFIIQTVTHPEGRWLRERNPSIH 372

BLAST of MELO3C014251.jh1 vs. NCBI nr
Match: KAA0047508.1 (putative amidohydrolase ytcJ [Cucumis melo var. makuwa] >TYK26480.1 putative amidohydrolase ytcJ [Cucumis melo var. makuwa])

HSP 1 Score: 122 bits (307), Expect = 2.21e-33
Identity = 54/97 (55.67%), Postives = 71/97 (73.20%), Query Frame = 0

Query: 4   LMSSYGGWTKFRGIPLHAWNLNTFTQIRNACGGFMEVTRETRNKVDLIEAVTKIKYNYTV 63
           ++ SYGGWT F+G+PL AWN+N++ QI +ACGG +EV++ T  K DLIE   KI++NYT 
Sbjct: 1   MVPSYGGWTSFKGLPLTAWNMNSYRQIGDACGGLVEVSKSTMRKTDLIEVRLKIRHNYTG 60

Query: 64  FIPATISVSDDKGNKFLVQTVVKAEGRWLKERSPRIH 100
           FIPA I++ D KGN F +QTV   E RW KER+  IH
Sbjct: 61  FIPAQINIKDSKGNIFTIQTVSFTEERWFKERNANIH 97

BLAST of MELO3C014251.jh1 vs. NCBI nr
Match: KAA0039949.1 (hypothetical protein E6C27_scaffold122G002290 [Cucumis melo var. makuwa] >TYK24554.1 hypothetical protein E5676_scaffold266G00990 [Cucumis melo var. makuwa])

HSP 1 Score: 132 bits (332), Expect = 2.46e-33
Identity = 55/98 (56.12%), Postives = 76/98 (77.55%), Query Frame = 0

Query: 3   RLMSSYGGWTKFRGIPLHAWNLNTFTQIRNACGGFMEVTRETRNKVDLIEAVTKIKYNYT 62
           +++ SYGGWT+FRGIPLH WNLNTF QI  ACGGF++   E+ NK++L EA+ K+K NYT
Sbjct: 304 KVIPSYGGWTRFRGIPLHIWNLNTFIQIGEACGGFIDAAPESINKLELTEALIKVKENYT 363

Query: 63  VFIPATISVSDDKGNKFLVQTVVKAEGRWLKERSPRIH 100
            F+PA I + D++G  F+VQT+   EG+WL+ER+P +H
Sbjct: 364 GFLPAFIQIHDEEGQDFIVQTITHPEGKWLRERNPSVH 401

BLAST of MELO3C014251.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TUN4 (Mitotic spindle checkpoint protein mad1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00660 PE=4 SV=1)

HSP 1 Score: 207 bits (526), Expect = 2.35e-64
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0

Query: 1   MPRLMSSYGGWTKFRGIPLHAWNLNTFTQIRNACGGFMEVTRETRNKVDLIEAVTKIKYN 60
           MPRLMSSYGGWTKFRGIPLHAWNLNTFTQIRNACGGFMEVTRETRNKVDLIEAV KIKYN
Sbjct: 243 MPRLMSSYGGWTKFRGIPLHAWNLNTFTQIRNACGGFMEVTRETRNKVDLIEAVIKIKYN 302

Query: 61  YTVFIPATISVSDDKGNKFLVQTVVKAEGRWLKERSPRIH 100
           YTVFIPATISVSDDKGNKFLVQTVVKAEGRWLKERSPRIH
Sbjct: 303 YTVFIPATISVSDDKGNKFLVQTVVKAEGRWLKERSPRIH 342

BLAST of MELO3C014251.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D5E9 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00670 PE=4 SV=1)

HSP 1 Score: 134 bits (337), Expect = 8.26e-37
Identity = 59/98 (60.20%), Postives = 78/98 (79.59%), Query Frame = 0

Query: 3   RLMSSYGGWTKFRGIPLHAWNLNTFTQIRNACGGFMEVTRETRNKVDLIEAVTKIKYNYT 62
           +L+ SYGGW +FRGIPLHAW  +TF QIR ACGG + V ++TR+K+D+IEA  K+ +NYT
Sbjct: 147 KLIPSYGGWKRFRGIPLHAWKQSTFKQIREACGGSLVVAKDTRDKIDIIEANIKVHFNYT 206

Query: 63  VFIPATISVSDDKGNKFLVQTVVKAEGRWLKERSPRIH 100
            FI ATI + DD+GN+FLV ++  +EGRWL ER+PRIH
Sbjct: 207 GFILATIIIIDDEGNRFLVHSIFHSEGRWLIERNPRIH 244

BLAST of MELO3C014251.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TRS9 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003060 PE=4 SV=1)

HSP 1 Score: 134 bits (338), Expect = 1.25e-34
Identity = 57/98 (58.16%), Postives = 77/98 (78.57%), Query Frame = 0

Query: 3   RLMSSYGGWTKFRGIPLHAWNLNTFTQIRNACGGFMEVTRETRNKVDLIEAVTKIKYNYT 62
           +++ SYGGWT+FRGIPLH WNLNTF QI  ACGGF++   E+ NK++L EA+ K+K NYT
Sbjct: 275 KVIPSYGGWTRFRGIPLHIWNLNTFIQIGEACGGFIDAAPESVNKIELTEALIKVKENYT 334

Query: 63  VFIPATISVSDDKGNKFLVQTVVKAEGRWLKERSPRIH 100
            F+PA I + D++G+ F++QTV   EGRWL+ER+P IH
Sbjct: 335 GFLPAFIQIHDEEGHVFIIQTVTHPEGRWLRERNPSIH 372

BLAST of MELO3C014251.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DT94 (Putative amidohydrolase ytcJ OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00450 PE=4 SV=1)

HSP 1 Score: 122 bits (307), Expect = 1.07e-33
Identity = 54/97 (55.67%), Postives = 71/97 (73.20%), Query Frame = 0

Query: 4   LMSSYGGWTKFRGIPLHAWNLNTFTQIRNACGGFMEVTRETRNKVDLIEAVTKIKYNYTV 63
           ++ SYGGWT F+G+PL AWN+N++ QI +ACGG +EV++ T  K DLIE   KI++NYT 
Sbjct: 1   MVPSYGGWTSFKGLPLTAWNMNSYRQIGDACGGLVEVSKSTMRKTDLIEVRLKIRHNYTG 60

Query: 64  FIPATISVSDDKGNKFLVQTVVKAEGRWLKERSPRIH 100
           FIPA I++ D KGN F +QTV   E RW KER+  IH
Sbjct: 61  FIPAQINIKDSKGNIFTIQTVSFTEERWFKERNANIH 97

BLAST of MELO3C014251.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DLT1 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00990 PE=4 SV=1)

HSP 1 Score: 132 bits (332), Expect = 1.19e-33
Identity = 55/98 (56.12%), Postives = 76/98 (77.55%), Query Frame = 0

Query: 3   RLMSSYGGWTKFRGIPLHAWNLNTFTQIRNACGGFMEVTRETRNKVDLIEAVTKIKYNYT 62
           +++ SYGGWT+FRGIPLH WNLNTF QI  ACGGF++   E+ NK++L EA+ K+K NYT
Sbjct: 304 KVIPSYGGWTRFRGIPLHIWNLNTFIQIGEACGGFIDAAPESINKLELTEALIKVKENYT 363

Query: 63  VFIPATISVSDDKGNKFLVQTVVKAEGRWLKERSPRIH 100
            F+PA I + D++G  F+VQT+   EG+WL+ER+P +H
Sbjct: 364 GFLPAFIQIHDEEGQDFIVQTITHPEGKWLRERNPSVH 401

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0047273.14.85e-6499.00mitotic spindle checkpoint protein mad1 [Cucumis melo var. makuwa][more]
KAA0057199.11.71e-3660.20hypothetical protein E6C27_scaffold280G00320 [Cucumis melo var. makuwa] >TYK1876... [more]
KAA0044557.12.57e-3458.16hypothetical protein E6C27_scaffold46G003060 [Cucumis melo var. makuwa][more]
KAA0047508.12.21e-3355.67putative amidohydrolase ytcJ [Cucumis melo var. makuwa] >TYK26480.1 putative ami... [more]
KAA0039949.12.46e-3356.12hypothetical protein E6C27_scaffold122G002290 [Cucumis melo var. makuwa] >TYK245... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TUN42.35e-6499.00Mitotic spindle checkpoint protein mad1 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5D3D5E98.26e-3760.20DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7TRS91.25e-3458.16DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3DT941.07e-3355.67Putative amidohydrolase ytcJ OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A5D3DLT11.19e-3356.12DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 11..50
e-value: 1.7E-8
score: 34.1

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C014251.jh1.t1MELO3C014251.jh1.t1mRNA