Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTACTTCACAGAACGATTCTTGTCTGGAGTTCGACACCTCGTAATACTTTCTGATAGAAATCAACCCAAAGAAGATGGACTTAGTCTCATTGTGGAGAAGCCATGGGCTGACGCTTTTGCAGATCATTGGCCACGCTTAGACAACAACTCAGTTCTTTCTAGATTATCCGTGGAGATACCTTTGTCTGAGGGAAAAAGCGCACGGGTCTTGCAATCTTCTATCCACAATGAGGCTCTTAATTCTGTCAGAGCTCTCACTCTTGGACAACGTTTAATTGAAGGCCAAACACGTTGGGGTACTGTGACTAAGATCCCTGGAGAGTTCTGCTTTATTGACTGCTACTGGGAGTGGTTGGAGCTTGTAGTTGGTCGAAATACGCGACTTCTTTATAGTACTCGTTTATATGGTGCCATAACAACTTCTTTATACACTTACGATCGTAACAGTGATGTTGTTCGAGCATTTTGTGAAGCATGGTGTCCTTCGACTAATACTCTTCATACTATGGCGGGCGAGTTATCAACAACACAATGGGTAAGTGATTAG
mRNA sequence
ATGGTTTACTTCACAGAACGATTCTTGTCTGGAGTTCGACACCTCGTAATACTTTCTGATAGAAATCAACCCAAAGAAGATGGACTTAGTCTCATTGTGGAGAAGCCATGGGCTGACGCTTTTGCAGATCATTGGCCACGCTTAGACAACAACTCAGTTCTTTCTAGATTATCCGTGGAGATACCTTTGTCTGAGGGAAAAAGCGCACGGGTCTTGCAATCTTCTATCCACAATGAGGCTCTTAATTCTGTCAGAGCTCTCACTCTTGGACAACGTTTAATTGAAGGCCAAACACGTTGGGGTACTGTGACTAAGATCCCTGGAGAGTTCTGCTTTATTGACTGCTACTGGGAGTGGTTGGAGCTTGTAGTTGGTCGAAATACGCGACTTCTTTATAGTACTCGTTTATATGGTGCCATAACAACTTCTTTATACACTTACGATCGTAACAGTGATGTTGTTCGAGCATTTTGTGAAGCATGGTGTCCTTCGACTAATACTCTTCATACTATGGCGGGCGAGTTATCAACAACACAATGGGTAAGTGATTAG
Coding sequence (CDS)
ATGGTTTACTTCACAGAACGATTCTTGTCTGGAGTTCGACACCTCGTAATACTTTCTGATAGAAATCAACCCAAAGAAGATGGACTTAGTCTCATTGTGGAGAAGCCATGGGCTGACGCTTTTGCAGATCATTGGCCACGCTTAGACAACAACTCAGTTCTTTCTAGATTATCCGTGGAGATACCTTTGTCTGAGGGAAAAAGCGCACGGGTCTTGCAATCTTCTATCCACAATGAGGCTCTTAATTCTGTCAGAGCTCTCACTCTTGGACAACGTTTAATTGAAGGCCAAACACGTTGGGGTACTGTGACTAAGATCCCTGGAGAGTTCTGCTTTATTGACTGCTACTGGGAGTGGTTGGAGCTTGTAGTTGGTCGAAATACGCGACTTCTTTATAGTACTCGTTTATATGGTGCCATAACAACTTCTTTATACACTTACGATCGTAACAGTGATGTTGTTCGAGCATTTTGTGAAGCATGGTGTCCTTCGACTAATACTCTTCATACTATGGCGGGCGAGTTATCAACAACACAATGGGTAAGTGATTAG
Protein sequence
MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTKIPGEFCFIDCYWEWLELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQWVSD
Homology
BLAST of MELO3C014207 vs. NCBI nr
Match:
KAA0047222.1 (putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 372.1 bits (954), Expect = 2.8e-99
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
Query: 6 ERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSE 65
ERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSE
Sbjct: 36 ERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSE 95
Query: 66 GKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTKIPGEFCFIDCYWEWLELVVG 125
GKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTKIPGEFCFIDCYWEWLELVVG
Sbjct: 96 GKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTKIPGEFCFIDCYWEWLELVVG 155
Query: 126 RNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQWVSD 184
RNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQWVSD
Sbjct: 156 RNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQWVSD 213
BLAST of MELO3C014207 vs. NCBI nr
Match:
KAA0047478.1 (hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa])
HSP 1 Score: 350.9 bits (899), Expect = 6.6e-93
Identity = 166/180 (92.22%), Postives = 171/180 (95.00%), Query Frame = 0
Query: 1 MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVE 60
MVYFTERFLSGVRHLVILSDRNQP+EDGLSLIVEKPWA AFADHWPRLDNNSVL RLSVE
Sbjct: 1 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60
Query: 61 IPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTKIPGEFCFIDCYWEWL 120
+PLSEGKSA VLQSSIHNEA NS RALTLGQRLIEGQTRWGTVTK+PGEFCF DCYWEWL
Sbjct: 61 VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWL 120
Query: 121 ELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW 180
ELVVGRNTRLLYSTRLYGA+T SLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELS + W
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180
BLAST of MELO3C014207 vs. NCBI nr
Match:
KAA0065375.1 (hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa])
HSP 1 Score: 345.9 bits (886), Expect = 2.1e-91
Identity = 164/180 (91.11%), Postives = 170/180 (94.44%), Query Frame = 0
Query: 1 MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVE 60
MVYFTERFLSGVRHLVILSDRNQP+EDGLSLIVEKPWA AFADHWPRLDNNSVL RLSVE
Sbjct: 1 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60
Query: 61 IPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTKIPGEFCFIDCYWEWL 120
IPLSEGKSA +LQSSIH+EA NS RALTLGQRLIEGQTRWGTVTK+P EFCF DCYWEWL
Sbjct: 61 IPLSEGKSAWILQSSIHHEAPNSGRALTLGQRLIEGQTRWGTVTKVPREFCFTDCYWEWL 120
Query: 121 ELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW 180
ELVVGRNTRLLYSTRLYGA+T SLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELS + W
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180
BLAST of MELO3C014207 vs. NCBI nr
Match:
KAA0050516.1 (hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa])
HSP 1 Score: 345.1 bits (884), Expect = 3.6e-91
Identity = 163/180 (90.56%), Postives = 170/180 (94.44%), Query Frame = 0
Query: 1 MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVE 60
MVYFTERFLSGVRHLVILSDRNQP+EDGLSLI+EKPWA AFADHWPRLDNNSVL RLSVE
Sbjct: 1 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIMEKPWAGAFADHWPRLDNNSVLPRLSVE 60
Query: 61 IPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTKIPGEFCFIDCYWEWL 120
IPLSEGKSA +LQSSIHNEA NS RALTLGQRLIEGQTRWGT+TK+PGEFCF DCYWEWL
Sbjct: 61 IPLSEGKSAWILQSSIHNEAPNSGRALTLGQRLIEGQTRWGTMTKVPGEFCFTDCYWEWL 120
Query: 121 ELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW 180
ELVVGRNTRLLYSTRLYG +TTSLYTYDRNSDVVRAF EAWCPSTNTLHTMAGELS + W
Sbjct: 121 ELVVGRNTRLLYSTRLYGTVTTSLYTYDRNSDVVRAFSEAWCPSTNTLHTMAGELSISLW 180
BLAST of MELO3C014207 vs. NCBI nr
Match:
TYK19639.1 (hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa])
HSP 1 Score: 341.3 bits (874), Expect = 5.3e-90
Identity = 162/180 (90.00%), Postives = 167/180 (92.78%), Query Frame = 0
Query: 1 MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVE 60
MVYFTERFLSGVRHLVILSDRNQP+EDGLSLIVEK WA AFADHWPRLDNNSVL RLSVE
Sbjct: 1 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKLWAGAFADHWPRLDNNSVLPRLSVE 60
Query: 61 IPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTKIPGEFCFIDCYWEWL 120
+PLSEGKSA VLQSSIHNEA NS RALTLGQRLIEGQTRWGTVTK+PGEFCF DCYWEWL
Sbjct: 61 VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWL 120
Query: 121 ELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW 180
ELVVGRNTRLLYST LY +T SLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELS + W
Sbjct: 121 ELVVGRNTRLLYSTHLYSVVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180
BLAST of MELO3C014207 vs. ExPASy TrEMBL
Match:
A0A5A7TUT6 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00110 PE=4 SV=1)
HSP 1 Score: 372.1 bits (954), Expect = 1.3e-99
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
Query: 6 ERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSE 65
ERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSE
Sbjct: 36 ERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVEIPLSE 95
Query: 66 GKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTKIPGEFCFIDCYWEWLELVVG 125
GKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTKIPGEFCFIDCYWEWLELVVG
Sbjct: 96 GKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTKIPGEFCFIDCYWEWLELVVG 155
Query: 126 RNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQWVSD 184
RNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQWVSD
Sbjct: 156 RNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQWVSD 213
BLAST of MELO3C014207 vs. ExPASy TrEMBL
Match:
A0A5A7TX42 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00950 PE=4 SV=1)
HSP 1 Score: 350.9 bits (899), Expect = 3.2e-93
Identity = 166/180 (92.22%), Postives = 171/180 (95.00%), Query Frame = 0
Query: 1 MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVE 60
MVYFTERFLSGVRHLVILSDRNQP+EDGLSLIVEKPWA AFADHWPRLDNNSVL RLSVE
Sbjct: 1 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60
Query: 61 IPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTKIPGEFCFIDCYWEWL 120
+PLSEGKSA VLQSSIHNEA NS RALTLGQRLIEGQTRWGTVTK+PGEFCF DCYWEWL
Sbjct: 61 VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWL 120
Query: 121 ELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW 180
ELVVGRNTRLLYSTRLYGA+T SLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELS + W
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180
BLAST of MELO3C014207 vs. ExPASy TrEMBL
Match:
A0A5A7VHW8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00370 PE=4 SV=1)
HSP 1 Score: 345.9 bits (886), Expect = 1.0e-91
Identity = 164/180 (91.11%), Postives = 170/180 (94.44%), Query Frame = 0
Query: 1 MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVE 60
MVYFTERFLSGVRHLVILSDRNQP+EDGLSLIVEKPWA AFADHWPRLDNNSVL RLSVE
Sbjct: 1 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60
Query: 61 IPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTKIPGEFCFIDCYWEWL 120
IPLSEGKSA +LQSSIH+EA NS RALTLGQRLIEGQTRWGTVTK+P EFCF DCYWEWL
Sbjct: 61 IPLSEGKSAWILQSSIHHEAPNSGRALTLGQRLIEGQTRWGTVTKVPREFCFTDCYWEWL 120
Query: 121 ELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW 180
ELVVGRNTRLLYSTRLYGA+T SLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELS + W
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180
BLAST of MELO3C014207 vs. ExPASy TrEMBL
Match:
A0A5A7U8L3 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001600 PE=4 SV=1)
HSP 1 Score: 345.1 bits (884), Expect = 1.8e-91
Identity = 163/180 (90.56%), Postives = 170/180 (94.44%), Query Frame = 0
Query: 1 MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVE 60
MVYFTERFLSGVRHLVILSDRNQP+EDGLSLI+EKPWA AFADHWPRLDNNSVL RLSVE
Sbjct: 1 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIMEKPWAGAFADHWPRLDNNSVLPRLSVE 60
Query: 61 IPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTKIPGEFCFIDCYWEWL 120
IPLSEGKSA +LQSSIHNEA NS RALTLGQRLIEGQTRWGT+TK+PGEFCF DCYWEWL
Sbjct: 61 IPLSEGKSAWILQSSIHNEAPNSGRALTLGQRLIEGQTRWGTMTKVPGEFCFTDCYWEWL 120
Query: 121 ELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW 180
ELVVGRNTRLLYSTRLYG +TTSLYTYDRNSDVVRAF EAWCPSTNTLHTMAGELS + W
Sbjct: 121 ELVVGRNTRLLYSTRLYGTVTTSLYTYDRNSDVVRAFSEAWCPSTNTLHTMAGELSISLW 180
BLAST of MELO3C014207 vs. ExPASy TrEMBL
Match:
A0A5A7TFC8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G00910 PE=4 SV=1)
HSP 1 Score: 341.3 bits (874), Expect = 2.5e-90
Identity = 162/180 (90.00%), Postives = 167/180 (92.78%), Query Frame = 0
Query: 1 MVYFTERFLSGVRHLVILSDRNQPKEDGLSLIVEKPWADAFADHWPRLDNNSVLSRLSVE 60
MVYFTERFLSGVRHLVILSDRNQP+EDGLSLIVEK WA AFADHWPRLDNNSVL RLSVE
Sbjct: 17 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKLWAGAFADHWPRLDNNSVLPRLSVE 76
Query: 61 IPLSEGKSARVLQSSIHNEALNSVRALTLGQRLIEGQTRWGTVTKIPGEFCFIDCYWEWL 120
+PLSEGKSA VLQSSIHNEA NS RALTLGQRLIEGQTRWGTVTK+PGEFCF DCYWEWL
Sbjct: 77 VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWL 136
Query: 121 ELVVGRNTRLLYSTRLYGAITTSLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSTTQW 180
ELVVGRNTRLLYST LY +T SLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELS + W
Sbjct: 137 ELVVGRNTRLLYSTHLYSVVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 196
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0047222.1 | 2.8e-99 | 100.00 | putative mitochondrial protein [Cucumis melo var. makuwa] | [more] |
KAA0047478.1 | 6.6e-93 | 92.22 | hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa] | [more] |
KAA0065375.1 | 2.1e-91 | 91.11 | hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa] | [more] |
KAA0050516.1 | 3.6e-91 | 90.56 | hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa] | [more] |
TYK19639.1 | 5.3e-90 | 90.00 | hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7TUT6 | 1.3e-99 | 100.00 | Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... | [more] |
A0A5A7TX42 | 3.2e-93 | 92.22 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7VHW8 | 1.0e-91 | 91.11 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
A0A5A7U8L3 | 1.8e-91 | 90.56 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
A0A5A7TFC8 | 2.5e-90 | 90.00 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
Match Name | E-value | Identity | Description | |