MELO3C014011.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C014011.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Descriptiontranscription initiation factor TFIID subunit 11
Locationchr06: 33850432 .. 33853312 (-)
RNA-Seq ExpressionMELO3C014011.jh1
SyntenyMELO3C014011.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GAACTCCGTCATCCATTCCCTCCTCTTCCCATATCTTATTCTCTCCCACTCCCCATCGGCGAACTATCTCACTCCTCATCGGCCAGCACAAAACTACATCAGATCGTTCCTTCCGATCATTTTTAACCTAATTAGAGATATTTCACAAAAATGAAGCAATCGAAGGATCCGTTTGAAGCCGCCTTCGAAGAGCAGGAGGAATCACCTCCGAACTCTCCTTCTGCTGCGGACGACCTCGAAATTCCGACCACTGTAGCCCCTGTTCCTGCCGACGCTTTTGATTTGCAAGACGGTGACGATGATCCAAAATCCGCTTCTGTCGCTACACATTCCGTTACTCCTGTGTCCACCACTTCTATGTTTGTTTCCTCTTCCTCCCATGTATCTGCCGCCCCTAAAACCAAAGAAGACGACGAGGAAGAAGAGGAAGAGAATGTTGAAGTTGAACTTGCAAAATTTCCCTCCAGCGGTGATCCGGATAAGATGGCAAAGATGCAGTATGTTCTCTTGGATCTCTCATATATAGTTTTAAATTTTATTTTTAATTGGTTTTTCTGCTTCAAGATGAGTTAGCTTAGTCTCAATGTTACCCTTATGGGAAAAAATACTCGAATTACTTGATGTTTAAAATGTTGGTAGCATGTAGCCCTTTGGTCGGGTTATCATCAGTTGATTTACATGTTTTGATTATGAACTAGTTCTTTATTTAGTTTCTCCAATAGAAAATTTAGGAAGATAGAAATTTACGAATTCCTAATGCCTGCAAAATATTGTGCTTTTGAACCTGGTGTAGCTTTTGGATCTTGCTGTTTGATCTTCTTCCAAATTACTAGGTGTTCCCATTAAGAATACTGCAATAGCCTGACATTGATGTTCTTCATCAAGAGATCCAAAAGATATCCTTTTCTCTGAGAAATCTCCGACTCCATTTGGTTAGAAAAGCACGATTGTTTCTTTGTAGCGAGGTTGCTAATATCCACACCTCCTATTTCAGTTGGAAGAGAGGTAGTTTCCCAATTAGTCATATTAGTAACCCCGAACTCCTTACTACCTTTTCAGAAGAAGTTTCTAATAAGTTTATTGAGCCAATTAATCATAGTACTGCTGGGACAAGCAAATATCTAGAAATAGTAAAGTGCGATGCTAGTAAGAATAGACTCTGCAAAGCAATTTCCCCTCTATAGAGGAGAAGATTCTTCCAATGCTCCAACTTTTTTTCGACTTTATTAATCATAGGTTGCAAAAAAGAGTCTTAAATTTACCACCAATACGCATGCCCACGTACTCAAGAGGCCATATGCTAGCCACAAAACCCCTCTCCTACGCATCTGTTGAAGCCTTCGAGTTACAAATATTAAGCCCAACCAAGAGAGTTTTAGAGAGGTAAACTCTTAAGCCTGACATCACCTCATAACCTGTAACAATGTTCTTCAAGTTATTGAACAAGGGCAGGTTGTAGTTCGAAAAGCAAAGAGTGTCATCAGCAAATTGAACCTCTCCATCTCTAATGGGAAGGCCCTTCATGAAGTCATCCCTCAGTCCTTTGTCGATAGGCCTGCCAAAGACATCCACCATCAACACCTAAAAGAGAGGGGCAAGTGGAACACCTTGCCTAAGCCCTTTAGCAGCGTTGATTTATCCTCTTGGATCATAATAGAGGAGGTGTTAGAATGTTAGTAATACAAGCTTTGATCCAACCAATCCAATGACCGCCAAAGCCTTTACAATTTAGCACCTCAAGGAGAAAGTCCTAGACTCCTACCCAACCGTACCCAAAGGCCTTCTCAAAATCCAGCTTGATCAAAACCCAACCCTTTTTCTTTCTATTAATACAATCATCAAAAAACTTGTAAGCAACCAAAATCAAGAATTTGCCTTTTTTTCCTTCTTCTTCTCCTTTTATGCTTGCAACTTTTAAGATGAATATGCTAGATCATTTTTACTTTGGTATCTTTTTGAGTGAACTAACACATTATGAAATCTTCACTTAAAAAAAGAATCCTCTTGTAACTTGTCTTGTTATTTTCCAGAGCAATTCTCTCACAATTTACAGAAGAACAGATGAGTCGTTACGAGTCCTTTCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGGTATGGATTTTAATATTTTCTCTTTTCGAAAGACACTATAGATAGCTAGGAAGGTTGGGGTGGGAATGCATTCTAGGTATTGGTTGGTTGGATCGTTTGTTTGTTTGTTTGTTTCATTATTATTTTTTTATTTTTGGTTTGAGATGTTAATCTTTTTGAACTTGAACTCAGCTCATCTTGTTTCATTTCACTTGTAAGCTGTAGCTGTTAGCAAGCATCTCGGGAACACAGAAAATTTCTGTACCGATGACAATCGTAGTGTCTGGTATAGCAAAGATGTTTGTTGGTGAACTCGTAGAAACAGGTATGTAAAAACCCAATTCCATTGTTCTTTCCAATTACATTTTATGCCAATATTAAACGTAGACCTAAGAATCTGATTTTTTTTAAAAAAAATTTGACTTATTTCAATACTTTTTATTTTGTTTCAGCAAGAGTTGTCATGACAGAGCGTAATGATTCGGGACCTATCAGACCGTGCCATCTCAGAGAAGTATATAGAAGACTAAAGCTTGAAGGTAAGATTCCTAGGAAATCAGTGCCTAGGCTCTTTCGCTAATCACTCTGTTTATTATAGGTGTTTTTGGAAGAAAATTTCAATATTACAGCATAAAAATTAGGCAAAACATCTCCATGTGTGTATATATATATATATATATATATCACTGAAGTTCCTAAGTATTTTTGTACGAATCTGACTTCTCACTTTACTACATACACGAATTATTGGAAGGAGGAAAACACAAACATAGATTTTCCAGCA

mRNA sequence

GAACTCCGTCATCCATTCCCTCCTCTTCCCATATCTTATTCTCTCCCACTCCCCATCGGCGAACTATCTCACTCCTCATCGGCCAGCACAAAACTACATCAGATCGTTCCTTCCGATCATTTTTAACCTAATTAGAGATATTTCACAAAAATGAAGCAATCGAAGGATCCGTTTGAAGCCGCCTTCGAAGAGCAGGAGGAATCACCTCCGAACTCTCCTTCTGCTGCGGACGACCTCGAAATTCCGACCACTGTAGCCCCTGTTCCTGCCGACGCTTTTGATTTGCAAGACGGTGACGATGATCCAAAATCCGCTTCTGTCGCTACACATTCCGTTACTCCTGTGTCCACCACTTCTATGTTTGTTTCCTCTTCCTCCCATGTATCTGCCGCCCCTAAAACCAAAGAAGACGACGAGGAAGAAGAGGAAGAGAATGTTGAAGTTGAACTTGCAAAATTTCCCTCCAGCGGTGATCCGGATAAGATGGCAAAGATGCAAGCAATTCTCTCACAATTTACAGAAGAACAGATGAGTCGTTACGAGTCCTTTCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGCTGTTAGCAAGCATCTCGGGAACACAGAAAATTTCTGTACCGATGACAATCGTAGTGTCTGGTATAGCAAAGATGTTTGTTGGTGAACTCGTAGAAACAGCAAGAGTTGTCATGACAGAGCGTAATGATTCGGGACCTATCAGACCGTGCCATCTCAGAGAAGTATATAGAAGACTAAAGCTTGAAGGTAAGATTCCTAGGAAATCAGTGCCTAGGCTCTTTCGCTAATCACTCTGTTTATTATAGGTGTTTTTGGAAGAAAATTTCAATATTACAGCATAAAAATTAGGCAAAACATCTCCATGTGTGTATATATATATATATATATATATCACTGAAGTTCCTAAGTATTTTTGTACGAATCTGACTTCTCACTTTACTACATACACGAATTATTGGAAGGAGGAAAACACAAACATAGATTTTCCAGCA

Coding sequence (CDS)

ATGAAGCAATCGAAGGATCCGTTTGAAGCCGCCTTCGAAGAGCAGGAGGAATCACCTCCGAACTCTCCTTCTGCTGCGGACGACCTCGAAATTCCGACCACTGTAGCCCCTGTTCCTGCCGACGCTTTTGATTTGCAAGACGGTGACGATGATCCAAAATCCGCTTCTGTCGCTACACATTCCGTTACTCCTGTGTCCACCACTTCTATGTTTGTTTCCTCTTCCTCCCATGTATCTGCCGCCCCTAAAACCAAAGAAGACGACGAGGAAGAAGAGGAAGAGAATGTTGAAGTTGAACTTGCAAAATTTCCCTCCAGCGGTGATCCGGATAAGATGGCAAAGATGCAAGCAATTCTCTCACAATTTACAGAAGAACAGATGAGTCGTTACGAGTCCTTTCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGCTGTTAGCAAGCATCTCGGGAACACAGAAAATTTCTGTACCGATGACAATCGTAGTGTCTGGTATAGCAAAGATGTTTGTTGGTGAACTCGTAGAAACAGCAAGAGTTGTCATGACAGAGCGTAATGATTCGGGACCTATCAGACCGTGCCATCTCAGAGAAGTATATAGAAGACTAAAGCTTGAAGGTAAGATTCCTAGGAAATCAGTGCCTAGGCTCTTTCGCTAA

Protein sequence

MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATHSVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR
Homology
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BLAST of MELO3C014011.jh1 vs. NCBI nr
Match: XP_016900577.1 (PREDICTED: transcription initiation factor TFIID subunit 11 [Cucumis melo])

HSP 1 Score: 406 bits (1044), Expect = 2.17e-142
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH 60

Query: 61  SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS
Sbjct: 61  SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180
           QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR 220
           VVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR
Sbjct: 181 VVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR 220

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BLAST of MELO3C014011.jh1 vs. NCBI nr
Match: TYK19451.1 (transcription initiation factor TFIID subunit 11 [Cucumis melo var. makuwa])

HSP 1 Score: 405 bits (1040), Expect = 8.83e-142
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH 60

Query: 61  SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS
Sbjct: 61  SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180
           QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR 220
           VVMTERNDSGPIRPCHLRE YRRLKLEGKIPRKSVPRLFR
Sbjct: 181 VVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220

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BLAST of MELO3C014011.jh1 vs. NCBI nr
Match: XP_004147964.1 (transcription initiation factor TFIID subunit 11 [Cucumis sativus])

HSP 1 Score: 396 bits (1018), Expect = 1.99e-138
Identity = 214/220 (97.27%), Postives = 215/220 (97.73%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAP PADAFDLQDGDDDPKSASVATH
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKSASVATH 60

Query: 61  SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           SV P STTSMFVSSSSHVS APKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS
Sbjct: 61  SVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180
           QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR 220
           VVMTERND+GPIRPCHLRE YRRLKLEGKIPRKSVPRLFR
Sbjct: 181 VVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220

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BLAST of MELO3C014011.jh1 vs. NCBI nr
Match: XP_038904708.1 (transcription initiation factor TFIID subunit 11 isoform X2 [Benincasa hispida])

HSP 1 Score: 373 bits (957), Expect = 1.18e-128
Identity = 207/222 (93.24%), Postives = 211/222 (95.05%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQD-GDDDPKSASVAT 60
           MKQSKDPFEAAFEEQEESPPNSPSA DDLEIPT VAP  ADAFDLQD GDDD KSA+VAT
Sbjct: 30  MKQSKDPFEAAFEEQEESPPNSPSAVDDLEIPTNVAPATADAFDLQDAGDDDSKSAAVAT 89

Query: 61  HSVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDK-MAKMQAI 120
           HS  P S+TSMFVSSSS+VSAAPKTKEDD+EEEEENVEVELAKFPSSGDPDK MAKMQAI
Sbjct: 90  HSAAPASSTSMFVSSSSNVSAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKNMAKMQAI 149

Query: 121 LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET 180
           LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET
Sbjct: 150 LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET 209

Query: 181 ARVVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR 220
           ARVVMTERNDSGPIRPCHLRE YRRLKLEGKIPRKSVPRLFR
Sbjct: 210 ARVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 251

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BLAST of MELO3C014011.jh1 vs. NCBI nr
Match: XP_022940909.1 (transcription initiation factor TFIID subunit 11 [Cucurbita moschata])

HSP 1 Score: 354 bits (908), Expect = 1.28e-121
Identity = 202/223 (90.58%), Postives = 208/223 (93.27%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAP-VPADAFDLQDGDDDPKSASVA- 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEI T VA  V ADA DL DGDD+PKSA+ A 
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAA 60

Query: 61  THSVTP-VSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQA 120
           T+S  P  STTS+FVSSSS+VSAAPKTKEDD+EEEEENVEVELAKFPSSGDPDKMAKMQA
Sbjct: 61  TNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKMAKMQA 120

Query: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180
           ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE
Sbjct: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180

Query: 181 TARVVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR 220
           TARVVMTERNDSG IRPCHLRE YRRLKLEGKIPRKSVPRLFR
Sbjct: 181 TARVVMTERNDSGAIRPCHLREAYRRLKLEGKIPRKSVPRLFR 223

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BLAST of MELO3C014011.jh1 vs. ExPASy Swiss-Prot
Match: Q9M565 (Transcription initiation factor TFIID subunit 11 OS=Arabidopsis thaliana OX=3702 GN=TAF11 PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 5.3e-55
Identity = 129/221 (58.37%), Postives = 157/221 (71.04%), Query Frame = 0 

Query: 1   MKQSKDPFEAAF-EEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVAT 60
           MK SKDPFEAA  EEQEESPP SP         +    +  D    QD D+ P    V  
Sbjct: 1   MKHSKDPFEAAIEEEQEESPPESPVGGGGGGDGSEDGRIEID--QTQDEDERP----VDV 60

Query: 61  HSVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAIL 120
                 + TS+ V+ + +     K K++D+EEEEEN++VEL K+P+S DP KMAKMQ IL
Sbjct: 61  RRPMKKAKTSVVVTEAKN-----KDKDEDDEEEEENMDVELTKYPTSSDPAKMAKMQTIL 120

Query: 121 SQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETA 180
           SQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +PM IV  GIAKMFVGELVETA
Sbjct: 121 SQFTEDQMSRYESFRRSALQRPQMKKLLIGVTGSQKIGMPMIIVACGIAKMFVGELVETA 180

Query: 181 RVVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR 221
           RVVM ER +SGPIRPCH+RE YRRLKLEGK+P++SVPRLFR
Sbjct: 181 RVVMAERKESGPIRPCHIRESYRRLKLEGKVPKRSVPRLFR 210

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BLAST of MELO3C014011.jh1 vs. ExPASy Swiss-Prot
Match: F4HR03 (Transcription initiation factor TFIID subunit 11b OS=Arabidopsis thaliana OX=3702 GN=TAF11B PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 6.9e-39
Identity = 109/221 (49.32%), Postives = 131/221 (59.28%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH 60
           MK SKDPFEAA EEQEESP         +E   T+           +GD+          
Sbjct: 32  MKHSKDPFEAAMEEQEESP---------VETEQTL-----------EGDE---------- 91

Query: 61  SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMA-KMQAIL 120
                              A  K K     E +   EVE  K  +  DP   A KMQ IL
Sbjct: 92  ------------------RAVKKCKTSVVAEAKNKDEVEFTKNITGADPVTRANKMQKIL 151

Query: 121 SQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETA 180
           SQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAKMFVG+LVETA
Sbjct: 152 SQFTEEQMSRYESFRRSGFKKSDMEKLVQRITGGPKMDDTMNIVVRGIAKMFVGDLVETA 204

Query: 181 RVVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR 221
           RVVM ER +SGPIRPCH+RE YRRLKL+GK+P++SV RLFR
Sbjct: 212 RVVMRERKESGPIRPCHIRESYRRLKLQGKVPQRSVQRLFR 204

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BLAST of MELO3C014011.jh1 vs. ExPASy Swiss-Prot
Match: Q5U1X0 (Transcription initiation factor TFIID subunit 11 OS=Rattus norvegicus OX=10116 GN=Taf11 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.8e-18
Identity = 73/207 (35.27%), Postives = 113/207 (54.59%), Query Frame = 0 

Query: 9   EAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATHSVTPVSTT 68
           E    E+  + P +P +AD   IP     V         GD D K A+     +     +
Sbjct: 14  EPGESEETRATPGAPVSADTEGIPEETDQV---------GDADSKEAAAEESELKSQDVS 73

Query: 69  SMFVSSSSHVS----AAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTE 128
            +  +     S    AA K K D ++++E+  +V         D D++ KMQ ++S F+E
Sbjct: 74  DVTAAEREDPSLLTPAAKKLKLDTKDKKEKKQKV---------DEDEIQKMQILVSSFSE 133

Query: 129 EQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMT 188
           EQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  
Sbjct: 134 EQLNRYEMYRRSAFPKAAIKRLIQSITGT-SVSQNVVIAMSGISKVFVGEVVEEALDVCE 193

Query: 189 ERNDSGPIRPCHLREVYRRLKLEGKIP 212
           +  +  P++P H+RE  RRLK +G+IP
Sbjct: 194 KWGEMPPLQPKHMREAVRRLKSKGQIP 201

[Close]
BLAST of MELO3C014011.jh1 vs. ExPASy Swiss-Prot
Match: Q99JX1 (Transcription initiation factor TFIID subunit 11 OS=Mus musculus OX=10090 GN=Taf11 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.3e-18
Identity = 77/208 (37.02%), Postives = 119/208 (57.21%), Query Frame = 0 

Query: 9   EAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSAS-----VATHSVT 68
           E    E+  + P +  AAD   IP             +DGD D K A+     + +  V+
Sbjct: 14  EPGESEETRATPGALVAADTEGIPEETD---------RDGDADLKEAAAEESELKSQDVS 73

Query: 69  PVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFT 128
            V T +   +SS    AA K K D ++++E+  +V         D D++ KMQ ++S F+
Sbjct: 74  DV-TAAERENSSLLTPAAKKLKLDIKDKKEKKQKV---------DEDEIQKMQILVSSFS 133

Query: 129 EEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVM 188
           EEQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V 
Sbjct: 134 EEQLNRYEMYRRSAFPKAAIKRLIQSITGT-SVSQNVVIAMSGISKVFVGEVVEEALDVC 193

Query: 189 TERNDSGPIRPCHLREVYRRLKLEGKIP 212
            +  ++ P++P H+RE  RRLK +G+IP
Sbjct: 194 EKWGETPPLQPKHMREAVRRLKSKGQIP 201

[Close]
BLAST of MELO3C014011.jh1 vs. ExPASy Swiss-Prot
Match: Q5RA91 (Transcription initiation factor TFIID subunit 11 OS=Pongo abelii OX=9601 GN=TAF11 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.9e-18
Identity = 75/204 (36.76%), Postives = 113/204 (55.39%), Query Frame = 0 

Query: 9   EAAFEEQEESPPNSPSAADDLEIP-TTVAPVPADAFDLQDGDDDPKSASVATHSVTPVST 68
           E    ++  + P  P A D   IP  T     AD  +    + + KS  ++        T
Sbjct: 14  ETGESDETAAAPGDPGATDTDGIPEDTDGDADADLKEAAAEEGELKSQDISD------LT 73

Query: 69  TSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQM 128
           T     SS    AA K K D +E++E+  +V         D D++ KMQ ++S F+EEQ+
Sbjct: 74  TVEREDSSLLTPAAKKLKIDTKEKKEKKQKV---------DEDEIQKMQILVSSFSEEQL 133

Query: 129 SRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERN 188
           +RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  +  
Sbjct: 134 NRYEMYRRSAFPKAAIKRLIQSITGT-SVSQNVVIAMSGISKVFVGEVVEEALDVCEKWG 193

Query: 189 DSGPIRPCHLREVYRRLKLEGKIP 212
           +  P++P H+RE  RRLK +G+IP
Sbjct: 194 EMPPLQPKHMREAVRRLKSKGQIP 201

[Close]
BLAST of MELO3C014011.jh1 vs. ExPASy TrEMBL
Match: A0A1S4DX73 (transcription initiation factor TFIID subunit 11 OS=Cucumis melo OX=3656 GN=LOC103490961 PE=3 SV=1)

HSP 1 Score: 406 bits (1044), Expect = 1.05e-142
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH 60

Query: 61  SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS
Sbjct: 61  SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180
           QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR 220
           VVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR
Sbjct: 181 VVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR 220

[Close]
BLAST of MELO3C014011.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D798 (Transcription initiation factor TFIID subunit 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001040 PE=3 SV=1)

HSP 1 Score: 405 bits (1040), Expect = 4.28e-142
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH 60

Query: 61  SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS
Sbjct: 61  SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180
           QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR 220
           VVMTERNDSGPIRPCHLRE YRRLKLEGKIPRKSVPRLFR
Sbjct: 181 VVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220

[Close]
BLAST of MELO3C014011.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L5S4 (TAFII28 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G038160 PE=3 SV=1)

HSP 1 Score: 396 bits (1018), Expect = 9.65e-139
Identity = 214/220 (97.27%), Postives = 215/220 (97.73%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAP PADAFDLQDGDDDPKSASVATH
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKSASVATH 60

Query: 61  SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           SV P STTSMFVSSSSHVS APKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS
Sbjct: 61  SVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180
           QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR 220
           VVMTERND+GPIRPCHLRE YRRLKLEGKIPRKSVPRLFR
Sbjct: 181 VVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220

[Close]
BLAST of MELO3C014011.jh1 vs. ExPASy TrEMBL
Match: A0A6J1FLN4 (transcription initiation factor TFIID subunit 11 OS=Cucurbita moschata OX=3662 GN=LOC111446328 PE=3 SV=1)

HSP 1 Score: 354 bits (908), Expect = 6.19e-122
Identity = 202/223 (90.58%), Postives = 208/223 (93.27%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAP-VPADAFDLQDGDDDPKSASVA- 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEI T VA  V ADA DL DGDD+PKSA+ A 
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAA 60

Query: 61  THSVTP-VSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQA 120
           T+S  P  STTS+FVSSSS+VSAAPKTKEDD+EEEEENVEVELAKFPSSGDPDKMAKMQA
Sbjct: 61  TNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKMAKMQA 120

Query: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180
           ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE
Sbjct: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180

Query: 181 TARVVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR 220
           TARVVMTERNDSG IRPCHLRE YRRLKLEGKIPRKSVPRLFR
Sbjct: 181 TARVVMTERNDSGAIRPCHLREAYRRLKLEGKIPRKSVPRLFR 223

[Close]
BLAST of MELO3C014011.jh1 vs. ExPASy TrEMBL
Match: A0A6J1KZI1 (transcription initiation factor TFIID subunit 11 OS=Cucurbita maxima OX=3661 GN=LOC111498496 PE=3 SV=1)

HSP 1 Score: 352 bits (904), Expect = 2.61e-121
Identity = 200/224 (89.29%), Postives = 207/224 (92.41%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVP-ADAFDLQDGDDDPKSASVA- 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEI T VA    ADA DL DGDDDPK+A+ A 
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAA 60

Query: 61  -THSVTP-VSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQ 120
            T+S  P  STTS+FVSSSS++SAAPKTKEDD+EEEEENVEVELAKFPSSGDPDKMAKMQ
Sbjct: 61  ATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKMAKMQ 120

Query: 121 AILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELV 180
           AILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELV
Sbjct: 121 AILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELV 180

Query: 181 ETARVVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR 220
           ETARVVMTERNDSG IRPCHLRE YRRLKLEGKIPRKSVPRLFR
Sbjct: 181 ETARVVMTERNDSGAIRPCHLREAYRRLKLEGKIPRKSVPRLFR 224

[Close]
BLAST of MELO3C014011.jh1 vs. TAIR 10
Match: AT4G20280.1 (TBP-associated factor 11 )

HSP 1 Score: 215.7 bits (548), Expect = 3.7e-56
Identity = 129/221 (58.37%), Postives = 157/221 (71.04%), Query Frame = 0 

Query: 1   MKQSKDPFEAAF-EEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVAT 60
           MK SKDPFEAA  EEQEESPP SP         +    +  D    QD D+ P    V  
Sbjct: 1   MKHSKDPFEAAIEEEQEESPPESPVGGGGGGDGSEDGRIEID--QTQDEDERP----VDV 60

Query: 61  HSVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAIL 120
                 + TS+ V+ + +     K K++D+EEEEEN++VEL K+P+S DP KMAKMQ IL
Sbjct: 61  RRPMKKAKTSVVVTEAKN-----KDKDEDDEEEEENMDVELTKYPTSSDPAKMAKMQTIL 120

Query: 121 SQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETA 180
           SQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +PM IV  GIAKMFVGELVETA
Sbjct: 121 SQFTEDQMSRYESFRRSALQRPQMKKLLIGVTGSQKIGMPMIIVACGIAKMFVGELVETA 180

Query: 181 RVVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR 221
           RVVM ER +SGPIRPCH+RE YRRLKLEGK+P++SVPRLFR
Sbjct: 181 RVVMAERKESGPIRPCHIRESYRRLKLEGKVPKRSVPRLFR 210

[Close]
BLAST of MELO3C014011.jh1 vs. TAIR 10
Match: AT1G20000.1 (TBP-associated factor 11B )

HSP 1 Score: 162.2 bits (409), Expect = 4.9e-40
Identity = 109/221 (49.32%), Postives = 131/221 (59.28%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH 60
           MK SKDPFEAA EEQEESP         +E   T+           +GD+          
Sbjct: 32  MKHSKDPFEAAMEEQEESP---------VETEQTL-----------EGDE---------- 91

Query: 61  SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMA-KMQAIL 120
                              A  K K     E +   EVE  K  +  DP   A KMQ IL
Sbjct: 92  ------------------RAVKKCKTSVVAEAKNKDEVEFTKNITGADPVTRANKMQKIL 151

Query: 121 SQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETA 180
           SQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAKMFVG+LVETA
Sbjct: 152 SQFTEEQMSRYESFRRSGFKKSDMEKLVQRITGGPKMDDTMNIVVRGIAKMFVGDLVETA 204

Query: 181 RVVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR 221
           RVVM ER +SGPIRPCH+RE YRRLKL+GK+P++SV RLFR
Sbjct: 212 RVVMRERKESGPIRPCHIRESYRRLKLQGKVPQRSVQRLFR 204

The following BLAST results are available for this feature:
BLAST of MELO3C014011.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016900577.12.17e-142100.00PREDICTED: transcription initiation factor TFIID subunit 11 [Cucumis melo][more]
TYK19451.18.83e-14299.55transcription initiation factor TFIID subunit 11 [Cucumis melo var. makuwa][more]
XP_004147964.11.99e-13897.27transcription initiation factor TFIID subunit 11 [Cucumis sativus][more]
XP_038904708.11.18e-12893.24transcription initiation factor TFIID subunit 11 isoform X2 [Benincasa hispida][more]
XP_022940909.11.28e-12190.58transcription initiation factor TFIID subunit 11 [Cucurbita moschata][more]
BLAST of MELO3C014011.jh1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M5655.3e-5558.37Transcription initiation factor TFIID subunit 11 OS=Arabidopsis thaliana OX=3702... [more]
F4HR036.9e-3949.32Transcription initiation factor TFIID subunit 11b OS=Arabidopsis thaliana OX=370... [more]
Q5U1X01.8e-1835.27Transcription initiation factor TFIID subunit 11 OS=Rattus norvegicus OX=10116 G... [more]
Q99JX12.3e-1837.02Transcription initiation factor TFIID subunit 11 OS=Mus musculus OX=10090 GN=Taf... [more]
Q5RA913.9e-1836.76Transcription initiation factor TFIID subunit 11 OS=Pongo abelii OX=9601 GN=TAF1... [more]
BLAST of MELO3C014011.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4DX731.05e-142100.00transcription initiation factor TFIID subunit 11 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A5D3D7984.28e-14299.55Transcription initiation factor TFIID subunit 11 OS=Cucumis melo var. makuwa OX=... [more]
A0A0A0L5S49.65e-13997.27TAFII28 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G038160 PE=... [more]
A0A6J1FLN46.19e-12290.58transcription initiation factor TFIID subunit 11 OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1KZI12.61e-12189.29transcription initiation factor TFIID subunit 11 OS=Cucurbita maxima OX=3661 GN=... [more]
BLAST of MELO3C014011.jh1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G20280.13.7e-5658.37TBP-associated factor 11 [more]
AT1G20000.14.9e-4049.32TBP-associated factor 11B [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 122..211
e-value: 5.5E-31
score: 108.5
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 122..211
IPR006809TAFII28-like protein domainPFAMPF04719TAFII28coord: 118..203
e-value: 1.9E-31
score: 108.0
IPR006809TAFII28-like protein domainCDDcd08048TAF11coord: 122..205
e-value: 1.28223E-39
score: 129.223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..80
NoneNo IPR availablePANTHERPTHR13218:SF19TAFII28-LIKE PROTEIN-RELATEDcoord: 1..220
IPR045127Transcription initiation factor TFIID subunit 11-likePANTHERPTHR13218TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 11-RELATEDcoord: 1..220

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C014011.jh1.t1MELO3C014011.jh1.t1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051123 RNA polymerase II preinitiation complex assembly
biological_process GO:0006367 transcription initiation from RNA polymerase II promoter
cellular_component GO:0005634 nucleus
cellular_component GO:0005669 transcription factor TFIID complex
molecular_function GO:0046982 protein heterodimerization activity