MELO3C013936 (gene) Melon (DHL92) v4

Overview
NameMELO3C013936
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr06: 32641544 .. 32641846 (-)
RNA-Seq ExpressionMELO3C013936
SyntenyMELO3C013936
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCATTCCCAATTACATCCCCAATAGCTATTAACCATTCCGAAAACAGAACTTCATCACTTACCTCGAGTCCAAGAAGCTCCGTTCCCCGACCTGAACTCTCCAGAATCAACACGCCTAACCTAATTTTAACTATAACTTCCCTCTCCGAACAACAACGGCAAAGTTCAACGATCCTCAATTCTTATCATAGTTCTACAAGTTCAGACCTTCTCGCCGCACCAACGACCGAAGCACGTGGTTGCACCGCCGTAGCTCCGCCGCTCGTTCGAATTAGGTCATGGAACTCTAGCTCGTGA

mRNA sequence

ATGGCATCATTCCCAATTACATCCCCAATAGCTATTAACCATTCCGAAAACAGAACTTCATCACTTACCTCGAGTCCAAGAAGCTCCGTTCCCCGACCTGAACTCTCCAGAATCAACACGCCTAACCTAATTTTAACTATAACTTCCCTCTCCGAACAACAACGGCAAAGTTCAACGATCCTCAATTCTTATCATAGTTCTACAAGTTCAGACCTTCTCGCCGCACCAACGACCGAAGCACGTGGTTGCACCGCCGTAGCTCCGCCGCTCGTTCGAATTAGGTCATGGAACTCTAGCTCGTGA

Coding sequence (CDS)

ATGGCATCATTCCCAATTACATCCCCAATAGCTATTAACCATTCCGAAAACAGAACTTCATCACTTACCTCGAGTCCAAGAAGCTCCGTTCCCCGACCTGAACTCTCCAGAATCAACACGCCTAACCTAATTTTAACTATAACTTCCCTCTCCGAACAACAACGGCAAAGTTCAACGATCCTCAATTCTTATCATAGTTCTACAAGTTCAGACCTTCTCGCCGCACCAACGACCGAAGCACGTGGTTGCACCGCCGTAGCTCCGCCGCTCGTTCGAATTAGGTCATGGAACTCTAGCTCGTGA

Protein sequence

MASFPITSPIAINHSENRTSSLTSSPRSSVPRPELSRINTPNLILTITSLSEQQRQSSTILNSYHSSTSSDLLAAPTTEARGCTAVAPPLVRIRSWNSSS
Homology
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BLAST of MELO3C013936 vs. NCBI nr
Match: KAE8650057.1 (hypothetical protein Csa_023702 [Cucumis sativus])

HSP 1 Score: 106.7 bits (265), Expect = 1.2e-19
Identity = 68/100 (68.00%), Postives = 74/100 (74.00%), Query Frame = 0 

Query: 1   MASFPITSPIAINHSENRTSSLTSSPRSSVPRPELSRINTPNLILTITSLSEQQRQSSTI 60
           MASFPI+SPIAINHSENRTSSLTSSPRSSVPRPELSRINTPNLI TITSLSEQQR S+  
Sbjct: 1   MASFPISSPIAINHSENRTSSLTSSPRSSVPRPELSRINTPNLISTITSLSEQQR-STEF 60

Query: 61  LNSYHSSTSSDLLAAPTTEARGCTAVAPPLVRIRSWNSSS 101
             S  ++  S  L   ++ AR          RIRSWNSSS
Sbjct: 61  RPSRRTNARSTWLRRRSSAAR----------RIRSWNSSS 89

The following BLAST results are available for this feature:
BLAST of MELO3C013936 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650057.11.2e-1968.00hypothetical protein Csa_023702 [Cucumis sativus][more]
BLAST of MELO3C013936 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C013936 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C013936 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013936.1MELO3C013936.1mRNA