MELO3C013676.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDSstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.GGATGGTTTCTCTTTACAGACTTTTGGGAGATTTTGTAGCCACTAAATCTACTAGTGGTGCTTACTCGTCTACGGGAGAACTTGTCTGTAAGTTTTTAGCGCTCTGTTTTGTTCCTAGGAAAGTTTAGGAATCTGATAGAAAATGTCCGTTGAATCGGATAATGGATAAGAAGTTCTTATGCTTTTCCTTTCTCTTCGAAGGTTTCCTGCAAACTGCTGCATTCTTGGAAGTCATTCATGGAGCTGTTGGTAATTTAAAGGAATTTTGGTGATATTCTTTTTTTTTTTTGATACCTCCCGTTAACCTAAAAGGTTAAGCGTATGAGTTAAAAGTCAAATTTAACTTTATATCATCTAACCCTTTACTTTACTTGTTGGCTTAAATACGTGAAAAACACACAAAACTCACAAATGTGAACTAACGTTAATTGGGAGAGGGCAATACTTGACCTCTTGGACTACACTTCTTTGATGTCATCTTAAATTATCGAATGACTCAAAAGTTGAAGCTTACGAGTGAAAAACGTTCTATTTTACATCGTCTAATGATATCCAAGTATGATAACCTTTAAACTCCAGGCCTGGTACCAACTGGAGTGCTGCTTCCTCTAATGCAGTGGGGTGGGAGGGTTCATTTTGTGGTTGCAGTTGTTCGTCAACTTGATGAGGTTCTGTCTTTCTCATTATCTTGCAATTTTCTTTACCAGAAAGACATAGTTTCTTGCTGGATGTTTTCCTCCTAGGGAGCTGGAAGAAATAGTGGAAAATTTGTGTAGTTAATTGTATTGTTAATGAAGAGTACACTTGGGTATATAATATATAAGCATCAGTGCTCCACTAACTACTCAAACAAGCTATTTATCAGTCTATTACGAACTTGATAACATAAACAGCCATAAGGTTCATGACGACTACAAGCACTTCACTACTTTTTCTTTTTGTTTGACAGATTCAACAGTTGCCTTCTGTGTTCATCACTTTCCTTGCTTGGAGCTTATCTGAGGTAAATTCTTTTCTTTTTCCTTCAAAATTGGGTATCTGTGGCTTACGGTTCATTCTTTCTTTAAATTACTTAACAAAGAAAATTGGGTAGTGAACAAGCGGACATTTTTTAAACAAATATCTGAGAAGAAAATTAGAGGTTGATTTTAGGTTTGTCAGATACTAATAGCCAAGCACCGATTTATTCTTTACTTATAGATGGATAGTTCGGTAGGGCTTTGCTAGTGAGCAATATATATAATCATGCTAAGATAATTGTAATCTGCTACAAATATCAGAGATTTTACCTTGCTCTACTGAAAAGTGAAATCTAAGTCTTCTGAATGCAACCTATCTATATCTTAAAGAGAAAAAAAAAAAAAGGTTAATGGCATTCTTCTTATGGTAAAATGATAGCATTCTTTCTTTTTGTGCTTGTAGTTTGTTGTCTTCTTAACGATTTCCTTCTCTCTTTTCTGCTTAGTTTCATTGATTTACCTGGAGTTCCATCTCTCCTTCAAACTGTAATTCCTTATACTGATTTTCTCTACCGCCTTTGGGATAATCTTCATCTTCATGTGTTTCCTTTTTTCCTTAATCAATTGGGTTTCTGGATTTTTACTGTGATGAAATGGATTCAGGTTATCAGATATTTTCACCATGCTTTGAACTGCTTGGGAGTTTGCCCATTTTGGCTTACATATCTTAGGTACTCTTCATCTTCCATGGAAAACAACACGTACCCAAAATGAGAAAAATAATTCTAATATTTAAATTTGTGATTTGTTTCTTCTAGGTACACTGCATTCATAGTCCTCTATCCTATTGGAGTGACAATTGGTGAAAGTGAGTACACAATATCTAACTCATCTTGATTCCTACAATTTGATATATCTCCAAGGAACTGGCGTAGTGCTTAGTTCACTGCTTGGGTTTGCAAGCCATATATTTTGACAAATATCACGAGCCTAGGAAACAAACATATGCTACAAAAACCTTGGTTTCTCCGATTTATCTACACACAACTTAATTACCGGTACATAAACTCAAACTTCTCAACCCTCGAACCACCATGCTTATTGAAACCACGAGTCAAATATCCCCTTCTCTTCACCAATACTCTAAATTTTTCTTGTATTTTACTGTGAGTGATGATGCACAGAACATGAACTATATTCTATTTCATCAAGAAAAAGGATCATTGGCAACTTATTAGAAGTATTTGATTTTGTGCAGTGTGGCTCATGTACCAAGCAATTCCATTTATGATAAAGAAGAACCTCTATGCAGATGTCTTTGATTACCTCCCCTTGAGCTATTACAATTTCATCAGGGTATGTCCAAACCCTCAGTAGATCTTCCTAGGAAGAACTTAGTTATTTTGATTTACCCGAAGTGAGATTACTTTACATGTAATCCTGCCAATATATGCTTATCTCCCCAATATAATATTGTTGTTCAGGTTCTGCTTCTTGTCTACCCATTATTGTTCTTGAAACTGTACCTTTATCTGTTCAAGCAAAGGAGATCAAAATTGGGCAAGCAGCATAAGAAGAAGAGAAACTAAAAGTTTAGGCTAATCTGGTATAATCTACGGTAAACTATACTCATATTCTTGGATGTTTGAACAATTTAGACATATATAATTGTTTAATTTGACTTATATTGAAACACTTCACAAGATGGTGAATTGATTCTATAGCATCTAGTGGTAGCCAGTTAGTTTCCTATGGCAAAAAAGTGTTTCTTGACCGCTTAATCCTTGTGTTATGTCTTTATCATTATCATTATCTTCTTTTCTTTTTCTTCTTTTTCTTTTTTTCCTTTCATTCACATAAATATATACCATAAAAGCTCGCAAGAATATTGATTTTTTTTTTTCCAGTGACCAGAATTATGGTGAGGAAAAGCAGAAGAATATAAATTATTTTTAAGTACTGGTGACATTGAATTATGTTTCTATTTGTTTAATTTTCTTTTTCCACGTTTAGTGGACCTTCGCTTCTAGATGTACAAGTAACCCACCACCATCAAAAACATTTCTAATTAACAATTGTATGTGTGTGGTAGCTGACGCAAAAGCTGATGAATTGAAATCTGATTGCTTATTATATAAGATATTGTCTCGACAA GGATGGTTTCTCTTTACAGACTTTTGGGAGATTTTGTAGCCACTAAATCTACTAGTGGTGCTTACTCGTCTACGGGAGAACTTGTCTGTTTCCTGCAAACTGCTGCATTCTTGGAAGTCATTCATGGAGCTGTTGGCCTGGTACCAACTGGAGTGCTGCTTCCTCTAATGCAGTGGGGTGGGAGGGTTCATTTTGTGGTTGCAGTTGTTCGTCAACTTGATGAGATTCAACAGTTGCCTTCTGTGTTCATCACTTTCCTTGCTTGGAGCTTATCTGAGGTTATCAGATATTTTCACCATGCTTTGAACTGCTTGGGAGTTTGCCCATTTTGGCTTACATATCTTAGGTACACTGCATTCATAGTCCTCTATCCTATTGGAGTGACAATTGGTGAAATGTGGCTCATGTACCAAGCAATTCCATTTATGATAAAGAAGAACCTCTATGCAGATGTCTTTGATTACCTCCCCTTGAGCTATTACAATTTCATCAGGGTTCTGCTTCTTGTCTACCCATTATTGTTCTTGAAACTGTACCTTTATCTGTTCAAGCAAAGGAGATCAAAATTGGGCAAGCAGCATAAGAAGAAGAGAAACTAAAAGTTTAGGCTAATCTGTGACCAGAATTATGGTGAGGAAAAGCAGAAGAATATAAATTATTTTTAAGTACTGGTGACATTGAATTATGTTTCTATTTGTTTAATTTTCTTTTTCCACGTTTAGTGGACCTTCGCTTCTAGATGTACAAGTAACCCACCACCATCAAAAACATTTCTAATTAACAATTGTATGTGTGTGGTAGCTGACGCAAAAGCTGATGAATTGAAATCTGATTGCTTATTATATAAGATATTGTCTCGACAA ATGGTTTCTCTTTACAGACTTTTGGGAGATTTTGTAGCCACTAAATCTACTAGTGGTGCTTACTCGTCTACGGGAGAACTTGTCTGTTTCCTGCAAACTGCTGCATTCTTGGAAGTCATTCATGGAGCTGTTGGCCTGGTACCAACTGGAGTGCTGCTTCCTCTAATGCAGTGGGGTGGGAGGGTTCATTTTGTGGTTGCAGTTGTTCGTCAACTTGATGAGATTCAACAGTTGCCTTCTGTGTTCATCACTTTCCTTGCTTGGAGCTTATCTGAGGTTATCAGATATTTTCACCATGCTTTGAACTGCTTGGGAGTTTGCCCATTTTGGCTTACATATCTTAGGTACACTGCATTCATAGTCCTCTATCCTATTGGAGTGACAATTGGTGAAATGTGGCTCATGTACCAAGCAATTCCATTTATGATAAAGAAGAACCTCTATGCAGATGTCTTTGATTACCTCCCCTTGAGCTATTACAATTTCATCAGGGTTCTGCTTCTTGTCTACCCATTATTGTTCTTGAAACTGTACCTTTATCTGTTCAAGCAAAGGAGATCAAAATTGGGCAAGCAGCATAAGAAGAAGAGAAACTAA MVSLYRLLGDFVATKSTSGAYSSTGELVCFLQTAAFLEVIHGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN Homology
BLAST of MELO3C013676.jh1 vs. NCBI nr
Match: XP_008448368.1 (PREDICTED: very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucumis melo] >KAA0061952.1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucumis melo var. makuwa] >TYK23978.1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 426 bits (1094), Expect = 4.44e-150 Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of MELO3C013676.jh1 vs. NCBI nr
Match: XP_004148217.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Cucumis sativus] >KGN47357.1 hypothetical protein Csa_023054 [Cucumis sativus]) HSP 1 Score: 422 bits (1085), Expect = 1.05e-148 Identity = 214/218 (98.17%), Postives = 217/218 (99.54%), Query Frame = 0
BLAST of MELO3C013676.jh1 vs. NCBI nr
Match: XP_038900764.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Benincasa hispida]) HSP 1 Score: 400 bits (1028), Expect = 5.12e-140 Identity = 203/218 (93.12%), Postives = 208/218 (95.41%), Query Frame = 0
BLAST of MELO3C013676.jh1 vs. NCBI nr
Match: XP_022148455.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Momordica charantia]) HSP 1 Score: 382 bits (981), Expect = 7.46e-133 Identity = 192/218 (88.07%), Postives = 203/218 (93.12%), Query Frame = 0
BLAST of MELO3C013676.jh1 vs. NCBI nr
Match: XP_022947850.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X2 [Cucurbita moschata] >KAG6605485.1 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 379 bits (972), Expect = 1.76e-131 Identity = 191/218 (87.61%), Postives = 201/218 (92.20%), Query Frame = 0
BLAST of MELO3C013676.jh1 vs. ExPASy Swiss-Prot
Match: Q2KIP8 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Bos taurus OX=9913 GN=HACD2 PE=2 SV=2) HSP 1 Score: 122.5 bits (306), Expect = 6.0e-27 Identity = 77/218 (35.32%), Postives = 129/218 (59.17%), Query Frame = 0
BLAST of MELO3C013676.jh1 vs. ExPASy Swiss-Prot
Match: Q6Y1H2 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Homo sapiens OX=9606 GN=HACD2 PE=1 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.3e-26 Identity = 76/218 (34.86%), Postives = 128/218 (58.72%), Query Frame = 0
BLAST of MELO3C013676.jh1 vs. ExPASy Swiss-Prot
Match: Q5RBK3 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Pongo abelii OX=9601 GN=HACD2 PE=2 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.3e-26 Identity = 76/218 (34.86%), Postives = 128/218 (58.72%), Query Frame = 0
BLAST of MELO3C013676.jh1 vs. ExPASy Swiss-Prot
Match: Q9D3B1 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Mus musculus OX=10090 GN=Hacd2 PE=1 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 3.0e-26 Identity = 76/218 (34.86%), Postives = 127/218 (58.26%), Query Frame = 0
BLAST of MELO3C013676.jh1 vs. ExPASy Swiss-Prot
Match: Q9N1R5 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1 OS=Ovis aries OX=9940 GN=HACD1 PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.5e-22 Identity = 65/209 (31.10%), Postives = 114/209 (54.55%), Query Frame = 0
BLAST of MELO3C013676.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DKD0 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00410 PE=3 SV=1) HSP 1 Score: 426 bits (1094), Expect = 2.15e-150 Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of MELO3C013676.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BJI8 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis melo OX=3656 GN=LOC103490580 PE=3 SV=1) HSP 1 Score: 426 bits (1094), Expect = 2.15e-150 Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of MELO3C013676.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KG29 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis sativus OX=3659 GN=Csa_6G303230 PE=3 SV=1) HSP 1 Score: 422 bits (1085), Expect = 5.06e-149 Identity = 214/218 (98.17%), Postives = 217/218 (99.54%), Query Frame = 0
BLAST of MELO3C013676.jh1 vs. ExPASy TrEMBL
Match: A0A6J1D2Y7 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Momordica charantia OX=3673 GN=LOC111017094 PE=3 SV=1) HSP 1 Score: 382 bits (981), Expect = 3.61e-133 Identity = 192/218 (88.07%), Postives = 203/218 (93.12%), Query Frame = 0
BLAST of MELO3C013676.jh1 vs. ExPASy TrEMBL
Match: A0A6J1G819 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucurbita moschata OX=3662 GN=LOC111451609 PE=3 SV=1) HSP 1 Score: 379 bits (972), Expect = 8.50e-132 Identity = 191/218 (87.61%), Postives = 201/218 (92.20%), Query Frame = 0
BLAST of MELO3C013676.jh1 vs. TAIR 10
Match: AT5G59770.1 (Protein-tyrosine phosphatase-like, PTPLA ) HSP 1 Score: 220.7 bits (561), Expect = 1.1e-57 Identity = 107/193 (55.44%), Postives = 146/193 (75.65%), Query Frame = 0
BLAST of MELO3C013676.jh1 vs. TAIR 10
Match: AT5G10480.1 (Protein-tyrosine phosphatase-like, PTPLA ) HSP 1 Score: 83.2 bits (204), Expect = 2.9e-16 Identity = 67/220 (30.45%), Postives = 111/220 (50.45%), Query Frame = 0
BLAST of MELO3C013676.jh1 vs. TAIR 10
Match: AT5G10480.2 (Protein-tyrosine phosphatase-like, PTPLA ) HSP 1 Score: 75.9 bits (185), Expect = 4.6e-14 Identity = 56/169 (33.14%), Postives = 92/169 (54.44%), Query Frame = 0
BLAST of MELO3C013676.jh1 vs. TAIR 10
Match: AT5G10480.3 (Protein-tyrosine phosphatase-like, PTPLA ) HSP 1 Score: 75.5 bits (184), Expect = 6.0e-14 Identity = 67/229 (29.26%), Postives = 111/229 (48.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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