MELO3C013676 (gene) Melon (DHL92) v4

Overview
NameMELO3C013676
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionVery-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
Locationchr11: 19447218 .. 19450586 (-)
RNA-Seq ExpressionMELO3C013676
SyntenyMELO3C013676
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGGATATCGTTGTAATACAGATTAAAATAGTCACGGCTTCAAACACGAATTCCTGTAAAAGCATACCGTAATAAGTTGACTTAATAGCTCATGTTAAACGGACGAGCTTTATTGTGGTGGCGCTCCGAACAAATTAGCCTTAATTTACTTTGGCTGGAAGAAACAGAATGGTTGGCAATTTGTTGACATCATATCCCAAGTTGAGTCAAGAGATCCAAAACAAAACCCCCCTAACTTAATTCCAATCCTACTTCTCTACTCCCAGATGTGATTTTTACCTAAACCTGAGAGAAGGGTATAAACTTTCTATTTCCATTTCCAATTTGAAGCTCAACAAGTGGGTTACTGTTCAATTTATCAACAACCCAATGTCTCGTCTATCGAACTTGTATCTTCTAACTTACAATTCCCTCCAGGGTTTTGGCTGGTAATGGTATTTTTCAATTTTTCAGTCTTAAGATCTTTCTGCTGTTGTTCTTCTTCAGCAACGGAATTGTGTTTCTTGTTGTCAGGATGGTTTCTCTTTACAGACTTGTGGGAGATTTTGTAGCCACTAAATCTACTAGTGGTGCTTACTCGTCTACGGGAGAACTTGTCTGTAAGTTTTTAGCGCTCTGTTTTGTTCCTAGGAAAGTTTAGGAATCTGATAGAAAATGTCCGTTGAATCGGATAATGGATAAGAAGTTCTTATGCTTTTCCTTTCTCTTCGAAGGTTTCCTGCAAACTGCTGCATTCTTGGAAGTCATTCATGGAGCTGTTGGTAATTTAAAGGAATTTTGGTGATATTCTTTTTTTTTTTTTTGATACCTCCTGTTAACCTAAAAGGTTAAGCGTATGAGTTAAAAGTCAAATTTAACTTTATATCATCTAACCCTTTACTTTACTTGTTGGCTTAAATACCTGAAAAACTCACAAAACTCACAAATGTAAACTAACGTTAATTGGGAGAGGGCAATACTTGACCTCTTGGACTACACTTCTTTGATGTCATTTTAAATTATCGAATGACTCAAAAGTTGAAGCTTACGAGTGAAAAACAAGTTCTATTTTACATCGTCTAATGATATCCAAGTATGATAACCTTTAAACTCCAGGCCTGGTACCAACTGGAGTGCTGCTTCCTCTAATGCAGTGGGGTGGGAGGGTTCATTTTGTGGTTGCAGTTGTTCGTCAACTTGATGAGGTTCTGTCTTTCTCATTATCTTGCAATTTTCTTTACCAGAAAGACATAGTTTCTTGCTGGATGTTTTCCTCCTAGGGAGCTGGAACAAATAGTGGAAAATTTGTGTAGTTAATTGTATTGTTAATGAAGAGTACACTTGGGTATATAATATATAAGCATCAGTGCTCCACTAACTACTCAAACAAGCTATTTATCAGTCTATTACGAACTTGATAACATAAACAGCCATAAGGTTCATGACGACTACAAGCACTTCACTACTTTTTCTTTTTGTTTGACAGATTCAACAGTTGCCTTCTGTGTTCATCACTTTCCTTGCTTGGAGCTTATCTGAGGTAAATTCTTTTCTTTTTCCTTCAAAATTGGGTATCTGTGGCTTACGGTTCATTCTTTCTTTAAATTACTTAACAAAGAAAATTGGGTAGTGAACAAGCGGACATTTTTTAAACAAATATCTGAGAAGAAAATTAGAGGTTGATTTTAGGTTTGTCAGATACTAATAGCCAAGCACCGATTTATTCTTTACTTATAGATGGATAGTTCGGTAGGGCTTTGCTAGTGAGCAATATATATAATCATGCTAAGATAATTGTAATCTGCTACAAATATCAGAGATTTTACCTTGCTCTACTGAAAAGTGAAATCTAAGTCTTCTGAATGCAACCTATCTATATCTTAAAGAGAAAAAAAAAAAAAAAAAAAAGGTTAATGGCATTCTTCTTATGGTAAAATGATAGCATTCTTTCTTTTTGTGCTTGTAGTTTGTTGTCTTCTTAACGATTTCCTTCTCTCTTTTCTGCTTAGTTTCATTGATTTACCTGGAGTTCCATCTCTCCTTCAAACTGTAATTCCTTATACTGATTTTCTCTACCGCCTTTGGGATAATCTTCATCTTCATGTGTTTCCTTTTTTCCTTAATCAATTGGGTTTCTGGATTTTTACTGTGATGAAATGGATTCAGGTTATCAGATATTTTCACCATGCTTTGAACTGCTTGGGAGTTTGCCCATTTTGGCTTACATATCTTAGGTACTCTTCATCTTCCATGGAAAACAACACGTACCCAAAATGAGAAAAATAATTCTAATATTTAAATTTGTGATTTGTTTCTTCTAGGTACACTGCATTCATAGTCCTCTATCCTATTGGAGTGACAATTGGTGAAAGTGAGTACACAATATCTAACTCATCTTGATTCCTACAATTTGATATATCTCCAAGGAACTGGCGTAGTGCTTAGTTCACTGCTTGGGTTTGCAAGCCATATATTTTGACAAATATCACGAGCCTAGGAAACAAACATATGCTACAAAAACCTTGGTTTCTCCGATTTATCTACACACAACTTAATTACCGGTACATAAACTCAAACTTCTCAACCCTCGAACCACCATGCTTATTGAAACCACGAGTCAAATATCCCCTTCTCTTCACCAATACTCTAAATTTTTCTTGTATTTTACTGTGAGTGATGATGCACAGAACATGAACTATATTCTATTTCATCAAGAAAAAGGATCATTGGCAACTTATTAGAAGTATTTGATTTTGTGCAGTGTGGCTCATGTACCAAGCAATTCCATTTATGATAAAGAAGAACCTCTATGCAGATGTCTTTGATTACCTCCCCTTGAGCTATTACAATTTCATCAGGGTATGTCCAAACCCTCAGTAGATCTTCCTAGGAAGAACTTAGTTATTTTGATTTACCCGAAGTGAGATTACTTTACATGTAATCCTGCCAATATATGCTTATCTCCCCAATATAATATTGTTGTTCAGGTTCTGCTTCTTGTCTACCCATTATTGTTCTTGAAACTGTACCTTTATCTGTTCAAGCAAAGGAGATCAAAATTGGGCAAGCAGCATAAGAAGAAGAGAAACTAAAAGTTTAGGCTAATCTGGTATAATCTACGGTAAACTATACTCATATTCTTGGATGTTTGAACAATTTAGACATATATAATTGTTTGACTTATATTGAAACACTTCACAAGATGGTGAATTGATTCTATAGCATCTAGTGGTAGCCAGTTAGTTTCCTATGGCAAAAAAGTGTTTCTTGACCGCTTAATCCTTGTGTTATGTCTTTATCATTATCATTATCTTCTTTTCTTTTTCTTCTTTTTCTTTTTTTCCTTTCATTCACATAAATATATACCATAAAAGCTCGCAAGAATATTGA

mRNA sequence

ACGGATATCGTTGTAATACAGATTAAAATAGTCACGGCTTCAAACACGAATTCCTGTAAAAGCATACCGTAATAAGTTGACTTAATAGCTCATGTTAAACGGACGAGCTTTATTGTGGTGGCGCTCCGAACAAATTAGCCTTAATTTACTTTGGCTGGAAGAAACAGAATGGTTGGCAATTTGTTGACATCATATCCCAAGTTGAGTCAAGAGATCCAAAACAAAACCCCCCTAACTTAATTCCAATCCTACTTCTCTACTCCCAGATGTGATTTTTACCTAAACCTGAGAGAAGGGTATAAACTTTCTATTTCCATTTCCAATTTGAAGCTCAACAAGTGGGTTACTGTTCAATTTATCAACAACCCAATGTCTCGTCTATCGAACTTGTATCTTCTAACTTACAATTCCCTCCAGGGTTTTGGCTGGATGGTTTCTCTTTACAGACTTGTGGGAGATTTTGTAGCCACTAAATCTACTAGTGGTGCTTACTCGTCTACGGGAGAACTTGTCTGTTTCCTGCAAACTGCTGCATTCTTGGAAGTCATTCATGGAGCTGTTGGTAATTTAAAGGAATTTTGGTGATATTCTTTTTTTTTTTTTTGATACCTCCTGTTAACCTAAAAGGTTAAGCGTATGAGTTAAAAGTCAAATTTAACTTTATATCATCTAACCCTTTACTTTACTTGTTGGCTTAAATACCTGAAAAACTCACAAAACTCACAAATGTAAACTAACGTTAATTGGGAGAGGGCAATACTTGACCTCTTGGACTACACTTCTTTGATGTCATTTTAAATTATCGAATGACTCAAAAGTTGAAGCTTACGAGTGAAAAACAAGTTCTATTTTACATCGTCTAATGATATCCAAGTATGATAACCTTTAAACTCCAGGCCTGGTACCAACTGGAGTGCTGCTTCCTCTAATGCAGTGGGGTGGGAGGGTTCATTTTGTGGTTGCAGTTGTTCGTCAACTTGATGAGATTCAACAGTTGCCTTCTGTGTTCATCACTTTCCTTGCTTGGAGCTTATCTGAGGTTATCAGATATTTTCACCATGCTTTGAACTGCTTGGGAGTTTGCCCATTTTGGCTTACATATCTTAGGTACACTGCATTCATAGTCCTCTATCCTATTGGAGTGACAATTGGTGAAATGTGGCTCATGTACCAAGCAATTCCATTTATGATAAAGAAGAACCTCTATGCAGATGTCTTTGATTACCTCCCCTTGAGCTATTACAATTTCATCAGGGTTCTGCTTCTTGTCTACCCATTATTGTTCTTGAAACTGTACCTTTATCTGTTCAAGCAAAGGAGATCAAAATTGGGCAAGCAGCATAAGAAGAAGAGAAACTAAAAGTTTAGGCTAATCTGGTATAATCTACGGTAAACTATACTCATATTCTTGGATGTTTGAACAATTTAGACATATATAATTGTTTGACTTATATTGAAACACTTCACAAGATGGTGAATTGATTCTATAGCATCTAGTGGTAGCCAGTTAGTTTCCTATGGCAAAAAAGTGTTTCTTGACCGCTTAATCCTTGTGTTATGTCTTTATCATTATCATTATCTTCTTTTCTTTTTCTTCTTTTTCTTTTTTTCCTTTCATTCACATAAATATATACCATAAAAGCTCGCAAGAATATTGA

Coding sequence (CDS)

ATGCAGTGGGGTGGGAGGGTTCATTTTGTGGTTGCAGTTGTTCGTCAACTTGATGAGATTCAACAGTTGCCTTCTGTGTTCATCACTTTCCTTGCTTGGAGCTTATCTGAGGTTATCAGATATTTTCACCATGCTTTGAACTGCTTGGGAGTTTGCCCATTTTGGCTTACATATCTTAGGTACACTGCATTCATAGTCCTCTATCCTATTGGAGTGACAATTGGTGAAATGTGGCTCATGTACCAAGCAATTCCATTTATGATAAAGAAGAACCTCTATGCAGATGTCTTTGATTACCTCCCCTTGAGCTATTACAATTTCATCAGGGTTCTGCTTCTTGTCTACCCATTATTGTTCTTGAAACTGTACCTTTATCTGTTCAAGCAAAGGAGATCAAAATTGGGCAAGCAGCATAAGAAGAAGAGAAACTAA

Protein sequence

MQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN
Homology
[Close]
BLAST of MELO3C013676 vs. ExPASy Swiss-Prot
Match: Q2KIP8 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Bos taurus OX=9913 GN=HACD2 PE=2 SV=2)

HSP 1 Score: 79.7 bits (195), Expect = 2.9e-14
Identity = 50/141 (35.46%), Postives = 86/141 (60.99%), Query Frame = 0 

Query: 6   RVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLRYTAFI 65
           RV  + AV   + E+Q   SV +  +AW+++E+IRY  +  + L   P+ + + RYT FI
Sbjct: 114 RVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYLIKWARYTLFI 173

Query: 66  VLYPIGVTIGEMWLMYQAIPFMIKKNLYA----DVFDYLPLSYYNFIRVLLLVYPLLFLK 125
           VLYP+GV+ GE+  +Y A+PF+ +  LY+    + +++    YY F+ ++++ Y  LF +
Sbjct: 174 VLYPMGVS-GELLTIYAALPFVRQAGLYSISLPNKYNF-SFDYYAFLILIMISYIPLFPQ 233

Query: 126 LYLYLFKQRRSKLG--KQHKK 141
           LY ++  QRR  L   ++HKK
Sbjct: 234 LYFHMIHQRRKILSHTEEHKK 252

[Close]
BLAST of MELO3C013676 vs. ExPASy Swiss-Prot
Match: Q9D3B1 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Mus musculus OX=10090 GN=Hacd2 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.8e-14
Identity = 50/141 (35.46%), Postives = 86/141 (60.99%), Query Frame = 0 

Query: 6   RVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLRYTAFI 65
           RV  + AV   + E+Q   SV +  +AW+++E+IRY  +  + L   P+ + + RYT FI
Sbjct: 114 RVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYIIKWARYTLFI 173

Query: 66  VLYPIGVTIGEMWLMYQAIPFMIKKNLYA----DVFDYLPLSYYNFIRVLLLVYPLLFLK 125
           VLYP+GVT GE+  +Y A+PF+ +  LY+    + +++    Y+ F+ ++++ Y  LF +
Sbjct: 174 VLYPMGVT-GELLTIYAALPFVRQAGLYSISLPNKYNF-SFDYHAFLILIMISYIPLFPQ 233

Query: 126 LYLYLFKQRRSKLG--KQHKK 141
           LY ++  QRR  L   ++HKK
Sbjct: 234 LYFHMIHQRRKVLSHTEEHKK 252

[Close]
BLAST of MELO3C013676 vs. ExPASy Swiss-Prot
Match: Q6Y1H2 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Homo sapiens OX=9606 GN=HACD2 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.0e-14
Identity = 49/141 (34.75%), Postives = 86/141 (60.99%), Query Frame = 0 

Query: 6   RVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLRYTAFI 65
           RV  + AV   + E+Q   SV +  +AW+++E+IRY  +  + L   P+ + + RYT FI
Sbjct: 114 RVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYLIKWARYTLFI 173

Query: 66  VLYPIGVTIGEMWLMYQAIPFMIKKNLYA----DVFDYLPLSYYNFIRVLLLVYPLLFLK 125
           VLYP+GV+ GE+  +Y A+PF+ +  LY+    + +++    YY F+ ++++ Y  +F +
Sbjct: 174 VLYPMGVS-GELLTIYAALPFVRQAGLYSISLPNKYNF-SFDYYAFLILIMISYIPIFPQ 233

Query: 126 LYLYLFKQRRSKLG--KQHKK 141
           LY ++  QRR  L   ++HKK
Sbjct: 234 LYFHMIHQRRKILSHTEEHKK 252

[Close]
BLAST of MELO3C013676 vs. ExPASy Swiss-Prot
Match: Q5RBK3 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Pongo abelii OX=9601 GN=HACD2 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.0e-14
Identity = 49/141 (34.75%), Postives = 86/141 (60.99%), Query Frame = 0 

Query: 6   RVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLRYTAFI 65
           RV  + AV   + E+Q   SV +  +AW+++E+IRY  +  + L   P+ + + RYT FI
Sbjct: 115 RVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYLIKWARYTLFI 174

Query: 66  VLYPIGVTIGEMWLMYQAIPFMIKKNLYA----DVFDYLPLSYYNFIRVLLLVYPLLFLK 125
           VLYP+GV+ GE+  +Y A+PF+ +  LY+    + +++    YY F+ ++++ Y  +F +
Sbjct: 175 VLYPMGVS-GELLTIYAALPFVRQAGLYSISLPNKYNF-SFDYYAFLILIMISYIPIFPQ 234

Query: 126 LYLYLFKQRRSKLG--KQHKK 141
           LY ++  QRR  L   ++HKK
Sbjct: 235 LYFHMIHQRRKILSHTEEHKK 253

[Close]
BLAST of MELO3C013676 vs. ExPASy Swiss-Prot
Match: Q4W1W1 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1 OS=Canis lupus familiaris OX=9615 GN=HACD1 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.0e-11
Identity = 41/137 (29.93%), Postives = 76/137 (55.47%), Query Frame = 0 

Query: 1   MQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR 60
           +Q   R+  V  +   +  IQ   SV +  +AW+++E+ RY  +  + L   P+++ + R
Sbjct: 104 VQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFIKWAR 163

Query: 61  YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFD---YLPLSYYNFIRVLLLVYPL 120
           Y  FI+LYP+GV +GE+  +Y A+P++ K  +++        +   YY F+ + +  Y  
Sbjct: 164 YNFFIILYPVGV-VGELLTIYAALPYVKKTGMFSIRLPNKYNVSFDYYYFLLITMASYIP 223

Query: 121 LFLKLYLYLFKQRRSKL 135
           LF +LY ++ +QRR  L
Sbjct: 224 LFPQLYFHMLRQRRKVL 239

[Close]
BLAST of MELO3C013676 vs. NCBI nr
Match: XP_008448368.1 (PREDICTED: very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucumis melo] >KAA0061952.1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucumis melo var. makuwa] >TYK23978.1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 284.6 bits (727), Expect = 4.6e-73
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR 60
           MQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR
Sbjct: 76  MQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR 135

Query: 61  YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFL 120
           YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFL
Sbjct: 136 YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFL 195

Query: 121 KLYLYLFKQRRSKLGKQHKKKRN 144
           KLYLYLFKQRRSKLGKQHKKKRN
Sbjct: 196 KLYLYLFKQRRSKLGKQHKKKRN 218

[Close]
BLAST of MELO3C013676 vs. NCBI nr
Match: XP_004148217.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Cucumis sativus] >KGN47357.1 hypothetical protein Csa_023054 [Cucumis sativus])

HSP 1 Score: 282.7 bits (722), Expect = 1.7e-72
Identity = 141/143 (98.60%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR 60
           MQWGGRVHFVVAVVRQLDEIQ+LPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR
Sbjct: 76  MQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR 135

Query: 61  YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFL 120
           YTAFI+LYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFL
Sbjct: 136 YTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFL 195

Query: 121 KLYLYLFKQRRSKLGKQHKKKRN 144
           KLYLYLFKQRRSKLGKQHKKKRN
Sbjct: 196 KLYLYLFKQRRSKLGKQHKKKRN 218

[Close]
BLAST of MELO3C013676 vs. NCBI nr
Match: XP_038900764.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Benincasa hispida])

HSP 1 Score: 271.2 bits (692), Expect = 5.2e-69
Identity = 136/143 (95.10%), Postives = 138/143 (96.50%), Query Frame = 0 

Query: 1   MQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR 60
           MQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRY HHA NCLGVCPFWLTYLR
Sbjct: 76  MQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYSHHAFNCLGVCPFWLTYLR 135

Query: 61  YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFL 120
           YTAFIVLYP GVTIGEMWLMYQAIPFM+KKNLYADVF YLP SYYNFIRVLLLVYPLLFL
Sbjct: 136 YTAFIVLYPTGVTIGEMWLMYQAIPFMVKKNLYADVFAYLPFSYYNFIRVLLLVYPLLFL 195

Query: 121 KLYLYLFKQRRSKLGKQHKKKRN 144
           KLYL+LFKQRRSKLGKQHKKKRN
Sbjct: 196 KLYLHLFKQRRSKLGKQHKKKRN 218

[Close]
BLAST of MELO3C013676 vs. NCBI nr
Match: XP_022148455.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Momordica charantia])

HSP 1 Score: 257.3 bits (656), Expect = 7.8e-65
Identity = 128/143 (89.51%), Postives = 135/143 (94.41%), Query Frame = 0 

Query: 1   MQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR 60
           MQWGGRVHF++AVVR+L E+Q LP VFITF+AWSLSEVIRY HHALNCLGVCPFWLTYLR
Sbjct: 76  MQWGGRVHFLIAVVRRLAEVQHLPYVFITFMAWSLSEVIRYSHHALNCLGVCPFWLTYLR 135

Query: 61  YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFL 120
           YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVF YLPLSYYN IRVLLLVYP  FL
Sbjct: 136 YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFAYLPLSYYNTIRVLLLVYPFFFL 195

Query: 121 KLYLYLFKQRRSKLGKQHKKKRN 144
           KLYL+LFKQRRSKLGKQH+KKRN
Sbjct: 196 KLYLHLFKQRRSKLGKQHQKKRN 218

[Close]
BLAST of MELO3C013676 vs. NCBI nr
Match: XP_022947848.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 251.1 bits (640), Expect = 5.6e-63
Identity = 126/143 (88.11%), Postives = 132/143 (92.31%), Query Frame = 0 

Query: 1   MQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR 60
           MQWGGRVHF+VAVVRQL E+QQLPSVFITFLAWSLSEVIRY HHALNCLGV  FWLTYLR
Sbjct: 105 MQWGGRVHFLVAVVRQLHEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVSLFWLTYLR 164

Query: 61  YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFL 120
           YTAFI+LYPIGVTIGEMWLMYQAIPFMIK NLYAD F YLP SYYN I+VLL VYPL FL
Sbjct: 165 YTAFIILYPIGVTIGEMWLMYQAIPFMIKNNLYADAFGYLPFSYYNAIKVLLFVYPLFFL 224

Query: 121 KLYLYLFKQRRSKLGKQHKKKRN 144
           KLYL+LFKQR+SKLGKQHKKKRN
Sbjct: 225 KLYLHLFKQRKSKLGKQHKKKRN 247

[Close]
BLAST of MELO3C013676 vs. ExPASy TrEMBL
Match: A0A5D3DKD0 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00410 PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.2e-73
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR 60
           MQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR
Sbjct: 76  MQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR 135

Query: 61  YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFL 120
           YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFL
Sbjct: 136 YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFL 195

Query: 121 KLYLYLFKQRRSKLGKQHKKKRN 144
           KLYLYLFKQRRSKLGKQHKKKRN
Sbjct: 196 KLYLYLFKQRRSKLGKQHKKKRN 218

[Close]
BLAST of MELO3C013676 vs. ExPASy TrEMBL
Match: A0A1S3BJI8 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis melo OX=3656 GN=LOC103490580 PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.2e-73
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR 60
           MQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR
Sbjct: 76  MQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR 135

Query: 61  YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFL 120
           YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFL
Sbjct: 136 YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFL 195

Query: 121 KLYLYLFKQRRSKLGKQHKKKRN 144
           KLYLYLFKQRRSKLGKQHKKKRN
Sbjct: 196 KLYLYLFKQRRSKLGKQHKKKRN 218

[Close]
BLAST of MELO3C013676 vs. ExPASy TrEMBL
Match: A0A0A0KG29 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis sativus OX=3659 GN=Csa_6G303230 PE=3 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 8.4e-73
Identity = 141/143 (98.60%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR 60
           MQWGGRVHFVVAVVRQLDEIQ+LPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR
Sbjct: 76  MQWGGRVHFVVAVVRQLDEIQRLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR 135

Query: 61  YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFL 120
           YTAFI+LYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFL
Sbjct: 136 YTAFIILYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFL 195

Query: 121 KLYLYLFKQRRSKLGKQHKKKRN 144
           KLYLYLFKQRRSKLGKQHKKKRN
Sbjct: 196 KLYLYLFKQRRSKLGKQHKKKRN 218

[Close]
BLAST of MELO3C013676 vs. ExPASy TrEMBL
Match: A0A6J1D2Y7 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Momordica charantia OX=3673 GN=LOC111017094 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.8e-65
Identity = 128/143 (89.51%), Postives = 135/143 (94.41%), Query Frame = 0 

Query: 1   MQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR 60
           MQWGGRVHF++AVVR+L E+Q LP VFITF+AWSLSEVIRY HHALNCLGVCPFWLTYLR
Sbjct: 76  MQWGGRVHFLIAVVRRLAEVQHLPYVFITFMAWSLSEVIRYSHHALNCLGVCPFWLTYLR 135

Query: 61  YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFL 120
           YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVF YLPLSYYN IRVLLLVYP  FL
Sbjct: 136 YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFAYLPLSYYNTIRVLLLVYPFFFL 195

Query: 121 KLYLYLFKQRRSKLGKQHKKKRN 144
           KLYL+LFKQRRSKLGKQH+KKRN
Sbjct: 196 KLYLHLFKQRRSKLGKQHQKKRN 218

[Close]
BLAST of MELO3C013676 vs. ExPASy TrEMBL
Match: A0A6J1G7R5 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucurbita moschata OX=3662 GN=LOC111451609 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.7e-63
Identity = 126/143 (88.11%), Postives = 132/143 (92.31%), Query Frame = 0 

Query: 1   MQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR 60
           MQWGGRVHF+VAVVRQL E+QQLPSVFITFLAWSLSEVIRY HHALNCLGV  FWLTYLR
Sbjct: 105 MQWGGRVHFLVAVVRQLHEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGVSLFWLTYLR 164

Query: 61  YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFL 120
           YTAFI+LYPIGVTIGEMWLMYQAIPFMIK NLYAD F YLP SYYN I+VLL VYPL FL
Sbjct: 165 YTAFIILYPIGVTIGEMWLMYQAIPFMIKNNLYADAFGYLPFSYYNAIKVLLFVYPLFFL 224

Query: 121 KLYLYLFKQRRSKLGKQHKKKRN 144
           KLYL+LFKQR+SKLGKQHKKKRN
Sbjct: 225 KLYLHLFKQRKSKLGKQHKKKRN 247

[Close]
BLAST of MELO3C013676 vs. TAIR 10
Match: AT5G59770.1 (Protein-tyrosine phosphatase-like, PTPLA )

HSP 1 Score: 168.3 bits (425), Expect = 4.4e-42
Identity = 80/139 (57.55%), Postives = 108/139 (77.70%), Query Frame = 0 

Query: 1   MQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHALNCLGVCPFWLTYLR 60
           MQW GR HF++A+V Q+ E+Q  P + IT +AW + E+IRY H+A  CLG CP+WLTYLR
Sbjct: 127 MQWSGRTHFILAIVGQIKEVQDSPWLSITLVAWCIGEMIRYPHYAFTCLGRCPYWLTYLR 186

Query: 61  YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYYNFIRVLLLVYPLLFL 120
           YT FIV+YP G+ +GE+ +MY+A+P++ ++NLYA+ F   P SYY+F+  +LLVYP L+L
Sbjct: 187 YTGFIVIYPTGL-VGELLIMYKALPYVKERNLYANFFSVFPFSYYDFLWAVLLVYPFLWL 246

Query: 121 KLYLYLFKQRRSKLGKQHK 140
           KLYL LFKQR+SKLGK  K
Sbjct: 247 KLYLQLFKQRKSKLGKSKK 264

[Close]
BLAST of MELO3C013676 vs. TAIR 10
Match: AT5G10480.1 (Protein-tyrosine phosphatase-like, PTPLA )

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07
Identity = 42/144 (29.17%), Postives = 75/144 (52.08%), Query Frame = 0 

Query: 2   QWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRY-FHHALNCLGVCPFWLTYLR 61
           Q G R+     ++    E++    V    ++WS++E+IRY F      LG  P W  +LR
Sbjct: 80  QIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSITEIIRYSFFGFKEALGFAPSWHLWLR 139

Query: 62  YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYA----DVFDYLPLSYYNFIRVLLLVYP 121
           Y++F++LYP G+T  E+ L+Y A+P +    +Y+    ++ ++    +Y  I VL +  P
Sbjct: 140 YSSFLLLYPTGIT-SEVGLIYLALPHIKTSEMYSVRMPNILNFSFDFFYATILVLAIYVP 199

Query: 122 LLFLKLYLYLFKQRRSKLGKQHKK 141
                +Y Y+  QR+  L K  ++
Sbjct: 200 -GSPHMYRYMLGQRKRALSKSKRE 221

[Close]
BLAST of MELO3C013676 vs. TAIR 10
Match: AT5G10480.2 (Protein-tyrosine phosphatase-like, PTPLA )

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07
Identity = 42/144 (29.17%), Postives = 75/144 (52.08%), Query Frame = 0 

Query: 2   QWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRY-FHHALNCLGVCPFWLTYLR 61
           Q G R+     ++    E++    V    ++WS++E+IRY F      LG  P W  +LR
Sbjct: 55  QIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSITEIIRYSFFGFKEALGFAPSWHLWLR 114

Query: 62  YTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYA----DVFDYLPLSYYNFIRVLLLVYP 121
           Y++F++LYP G+T  E+ L+Y A+P +    +Y+    ++ ++    +Y  I VL +  P
Sbjct: 115 YSSFLLLYPTGIT-SEVGLIYLALPHIKTSEMYSVRMPNILNFSFDFFYATILVLAIYVP 174

Query: 122 LLFLKLYLYLFKQRRSKLGKQHKK 141
                +Y Y+  QR+  L K  ++
Sbjct: 175 -GSPHMYRYMLGQRKRALSKSKRE 196

[Close]
BLAST of MELO3C013676 vs. TAIR 10
Match: AT5G10480.3 (Protein-tyrosine phosphatase-like, PTPLA )

HSP 1 Score: 46.2 bits (108), Expect = 2.5e-05
Identity = 42/153 (27.45%), Postives = 75/153 (49.02%), Query Frame = 0 

Query: 2   QWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLS---------EVIRY-FHHALNCLGV 61
           Q G R+     ++    E++    V    ++WS++         E+IRY F      LG 
Sbjct: 80  QIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSITEFPITTWIVEIIRYSFFGFKEALGF 139

Query: 62  CPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYA----DVFDYLPLSYYNF 121
            P W  +LRY++F++LYP G+T  E+ L+Y A+P +    +Y+    ++ ++    +Y  
Sbjct: 140 APSWHLWLRYSSFLLLYPTGIT-SEVGLIYLALPHIKTSEMYSVRMPNILNFSFDFFYAT 199

Query: 122 IRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKK 141
           I VL +  P     +Y Y+  QR+  L K  ++
Sbjct: 200 ILVLAIYVP-GSPHMYRYMLGQRKRALSKSKRE 230

The following BLAST results are available for this feature:
BLAST of MELO3C013676 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q2KIP82.9e-1435.46Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Bos taurus OX=9913 GN=HA... [more]
Q9D3B13.8e-1435.46Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Mus musculus OX=10090 GN... [more]
Q6Y1H25.0e-1434.75Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Homo sapiens OX=9606 GN=... [more]
Q5RBK35.0e-1434.75Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Pongo abelii OX=9601 GN=... [more]
Q4W1W13.0e-1129.93Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1 OS=Canis lupus familiaris O... [more]
BLAST of MELO3C013676 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008448368.14.6e-73100.00PREDICTED: very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucu... [more]
XP_004148217.11.7e-7298.60very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Cucumis sativus] >KGN47357... [more]
XP_038900764.15.2e-6995.10very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Benincasa hispida][more]
XP_022148455.17.8e-6589.51very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Momordica charantia][more]
XP_022947848.15.6e-6388.11very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucurbita mosch... [more]
BLAST of MELO3C013676 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DKD02.2e-73100.00Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis melo var. makuwa O... [more]
A0A1S3BJI82.2e-73100.00Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis melo OX=3656 GN=LO... [more]
A0A0A0KG298.4e-7398.60Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis sativus OX=3659 GN... [more]
A0A6J1D2Y73.8e-6589.51Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Momordica charantia OX=367... [more]
A0A6J1G7R52.7e-6388.11Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucurbita moschata OX=3662... [more]
BLAST of MELO3C013676 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G59770.14.4e-4257.55Protein-tyrosine phosphatase-like, PTPLA [more]
AT5G10480.11.2e-0729.17Protein-tyrosine phosphatase-like, PTPLA [more]
AT5G10480.21.2e-0729.17Protein-tyrosine phosphatase-like, PTPLA [more]
AT5G10480.32.5e-0527.45Protein-tyrosine phosphatase-like, PTPLA [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007482Protein-tyrosine phosphatase-like, PTPLAPFAMPF04387PTPLAcoord: 1..136
e-value: 2.3E-35
score: 121.7
IPR007482Protein-tyrosine phosphatase-like, PTPLAPANTHERPTHR11035PTPLA DOMAIN PROTEINcoord: 1..140
NoneNo IPR availablePANTHERPTHR11035:SF35VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASEcoord: 1..140

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013676.1MELO3C013676.1mRNA