MELO3C013584 (gene) Melon (DHL92) v4

Overview
NameMELO3C013584
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr11: 17380352 .. 17380588 (+)
RNA-Seq ExpressionMELO3C013584
SyntenyMELO3C013584
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGAGATTGAGATTGACGTTCCGTGTAACCTAGAGAAACGAATTATTATTTATGACCCATTCATTAAGGGAAAACAACCTATCCTTGATGAACCTGGTGAGACAAGTTCAGTGAGAAGACCACCATCTAAAGACGAAGTTCCTGCGACAACTGAAGGGGATCTCCGTGATTATCTCAGAACTACAATCGCGAAACCCATGCTCGAAAGTTTCCAGAACGTGTTCAAACCGTAG

mRNA sequence

ATGAACGAGATTGAGATTGACGTTCCGTGTAACCTAGAGAAACGAATTATTATTTATGACCCATTCATTAAGGGAAAACAACCTATCCTTGATGAACCTGGTGAGACAAGTTCAGTGAGAAGACCACCATCTAAAGACGAAGTTCCTGCGACAACTGAAGGGGATCTCCGTGATTATCTCAGAACTACAATCGCGAAACCCATGCTCGAAAGTTTCCAGAACGTGTTCAAACCGTAG

Coding sequence (CDS)

ATGAACGAGATTGAGATTGACGTTCCGTGTAACCTAGAGAAACGAATTATTATTTATGACCCATTCATTAAGGGAAAACAACCTATCCTTGATGAACCTGGTGAGACAAGTTCAGTGAGAAGACCACCATCTAAAGACGAAGTTCCTGCGACAACTGAAGGGGATCTCCGTGATTATCTCAGAACTACAATCGCGAAACCCATGCTCGAAAGTTTCCAGAACGTGTTCAAACCGTAG

Protein sequence

MNEIEIDVPCNLEKRIIIYDPFIKGKQPILDEPGETSSVRRPPSKDEVPATTEGDLRDYLRTTIAKPMLESFQNVFKP
Homology
[Close]
BLAST of MELO3C013584 vs. NCBI nr
Match: KAA0032236.1 (hypothetical protein E6C27_scaffold219G00580 [Cucumis melo var. makuwa])

HSP 1 Score: 67.4 bits (163), Expect = 6.2e-08
Identity = 32/75 (42.67%), Postives = 49/75 (65.33%), Query Frame = 0 

Query: 3   EIEIDVPCNLEKRIIIYDPFIKGKQPILDEPGETSSVRRPPSKDEVPATTEGDLRDYLRT 62
           E E  V  N E ++I+YDP IKGKQP+L +  +T+ V +  +K E  A  EGDL +Y++ 
Sbjct: 154 EQEDAVEINREMQVIVYDPLIKGKQPVLKDVSKTNLVPKDSAKHEGSAKNEGDLHNYIKN 213

Query: 63  TIAKPMLESFQNVFK 78
            +A+PM+ +FQ V +
Sbjct: 214 HVAEPMIANFQIVME 228

[Close]
BLAST of MELO3C013584 vs. NCBI nr
Match: TYK22161.1 (hypothetical protein E5676_scaffold333G00170 [Cucumis melo var. makuwa])

HSP 1 Score: 67.4 bits (163), Expect = 6.2e-08
Identity = 32/75 (42.67%), Postives = 49/75 (65.33%), Query Frame = 0 

Query: 3   EIEIDVPCNLEKRIIIYDPFIKGKQPILDEPGETSSVRRPPSKDEVPATTEGDLRDYLRT 62
           E E  V  N E ++I+YDP IKGKQP+L +  +T+ V +  +K E  A  EGDL +Y++ 
Sbjct: 154 EQEDAVEINREMQVIVYDPLIKGKQPVLKDVSKTNLVPKDSAKHEGSAKNEGDLHNYIKN 213

Query: 63  TIAKPMLESFQNVFK 78
            +A+PM+ +FQ V +
Sbjct: 214 HVAEPMIANFQIVME 228

[Close]
BLAST of MELO3C013584 vs. ExPASy TrEMBL
Match: A0A5A7SQE2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00580 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.0e-08
Identity = 32/75 (42.67%), Postives = 49/75 (65.33%), Query Frame = 0 

Query: 3   EIEIDVPCNLEKRIIIYDPFIKGKQPILDEPGETSSVRRPPSKDEVPATTEGDLRDYLRT 62
           E E  V  N E ++I+YDP IKGKQP+L +  +T+ V +  +K E  A  EGDL +Y++ 
Sbjct: 154 EQEDAVEINREMQVIVYDPLIKGKQPVLKDVSKTNLVPKDSAKHEGSAKNEGDLHNYIKN 213

Query: 63  TIAKPMLESFQNVFK 78
            +A+PM+ +FQ V +
Sbjct: 214 HVAEPMIANFQIVME 228

[Close]
BLAST of MELO3C013584 vs. ExPASy TrEMBL
Match: A0A5D3DEP9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00170 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.0e-08
Identity = 32/75 (42.67%), Postives = 49/75 (65.33%), Query Frame = 0 

Query: 3   EIEIDVPCNLEKRIIIYDPFIKGKQPILDEPGETSSVRRPPSKDEVPATTEGDLRDYLRT 62
           E E  V  N E ++I+YDP IKGKQP+L +  +T+ V +  +K E  A  EGDL +Y++ 
Sbjct: 154 EQEDAVEINREMQVIVYDPLIKGKQPVLKDVSKTNLVPKDSAKHEGSAKNEGDLHNYIKN 213

Query: 63  TIAKPMLESFQNVFK 78
            +A+PM+ +FQ V +
Sbjct: 214 HVAEPMIANFQIVME 228

The following BLAST results are available for this feature:
BLAST of MELO3C013584 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C013584 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0032236.16.2e-0842.67hypothetical protein E6C27_scaffold219G00580 [Cucumis melo var. makuwa][more]
TYK22161.16.2e-0842.67hypothetical protein E5676_scaffold333G00170 [Cucumis melo var. makuwa][more]
BLAST of MELO3C013584 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SQE23.0e-0842.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DEP93.0e-0842.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C013584 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..53

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013584.1MELO3C013584.1mRNA