Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GCACGAATTTGACAAAGATCGTGTCCTTGTTTTGATTGAATTAACCAAAACCTCCTTATCATGTCAAGAGGAAACTCTCCAGCCTATTGATGCAATCCTTATTAACCAAACTAAACCGCCCAACCCTGATAATTCAAATCAAGACATCTTCCATGAAACCTCTTATGACCTAGCAACATTGTTAGATGATACGACTAGAGAGTCTGAAGAAGGCGATAAAGAGAAGGAAGTCCCGAAGGAGACTATTGATGATCCAATCCAAGAAGAAAAAGAAAAACTCCTAGAGGACGTTGGCGAGAAAAGTCTCCCCTCACCTCCTAAGTCAATCCCAGAAGTCGTAACGTGGTTAGATAAACTGAAGGAGGTGGTGAGAGAAGAAAAAGAAGTTGACATGGACTATGTGGTTCAGTTCATGGATGAGTTTATTTGTAAACCTTTAGAGAAAGGATTTGAGGATATATTCTAG
mRNA sequence
GCACGAATTTGACAAAGATCGTGTCCTTGTTTTGATTGAATTAACCAAAACCTCCTTATCATGTCAAGAGGAAACTCTCCAGCCTATTGATGCAATCCTTATTAACCAAACTAAACCGCCCAACCCTGATAATTCAAATCAAGACATCTTCCATGAAACCTCTTATGACCTAGCAACATTGTTAGATGATACGACTAGAGAGTCTGAAGAAGGCGATAAAGAGAAGGAAGTCCCGAAGGAGACTATTGATGATCCAATCCAAGAAGAAAAAGAAAAACTCCTAGAGGACGTTGGCGAGAAAAGTCTCCCCTCACCTCCTAAGTCAATCCCAGAAGTCGTAACGTGGTTAGATAAACTGAAGGAGGTGGTGAGAGAAGAAAAAGAAGTTGACATGGACTATGTGGTTCAGTTCATGGATGAGTTTATTTGTAAACCTTTAGAGAAAGGATTTGAGGATATATTCTAG
Coding sequence (CDS)
CACGAATTTGACAAAGATCGTGTCCTTGTTTTGATTGAATTAACCAAAACCTCCTTATCATGTCAAGAGGAAACTCTCCAGCCTATTGATGCAATCCTTATTAACCAAACTAAACCGCCCAACCCTGATAATTCAAATCAAGACATCTTCCATGAAACCTCTTATGACCTAGCAACATTGTTAGATGATACGACTAGAGAGTCTGAAGAAGGCGATAAAGAGAAGGAAGTCCCGAAGGAGACTATTGATGATCCAATCCAAGAAGAAAAAGAAAAACTCCTAGAGGACGTTGGCGAGAAAAGTCTCCCCTCACCTCCTAAGTCAATCCCAGAAGTCGTAACGTGGTTAGATAAACTGAAGGAGGTGGTGAGAGAAGAAAAAGAAGTTGACATGGACTATGTGGTTCAGTTCATGGATGAGTTTATTTGTAAACCTTTAGAGAAAGGATTTGAGGATATATTCTAG
Protein sequence
HEFDKDRVLVLIELTKTSLSCQEETLQPIDAILINQTKPPNPDNSNQDIFHETSYDLATLLDDTTRESEEGDKEKEVPKETIDDPIQEEKEKLLEDVGEKSLPSPPKSIPEVVTWLDKLKEVVREEKEVDMDYVVQFMDEFICKPLEKGFEDIF
Homology
BLAST of MELO3C013517 vs. NCBI nr
Match:
TYK02157.1 (hypothetical protein E5676_scaffold388G00470 [Cucumis melo var. makuwa])
HSP 1 Score: 300.8 bits (769), Expect = 6.6e-78
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
Query: 1 HEFDKDRVLVLIELTKTSLSCQEETLQPIDAILINQTKPPNPDNSNQDIFHETSYDLATL 60
HEFDKDRVLVLIELTKTSLSCQEETLQPIDAILINQTKPPNPDNSNQDIFHETSYDLATL
Sbjct: 23 HEFDKDRVLVLIELTKTSLSCQEETLQPIDAILINQTKPPNPDNSNQDIFHETSYDLATL 82
Query: 61 LDDTTRESEEGDKEKEVPKETIDDPIQEEKEKLLEDVGEKSLPSPPKSIPEVVTWLDKLK 120
LDDTTRESEEGDKEKEVPKETIDDPIQEEKEKLLEDVGEKSLPSPPKSIPEVVTWLDKLK
Sbjct: 83 LDDTTRESEEGDKEKEVPKETIDDPIQEEKEKLLEDVGEKSLPSPPKSIPEVVTWLDKLK 142
Query: 121 EVVREEKEVDMDYVVQFMDEFICKPLEKGFEDIF 155
EVVREEKEVDMDYVVQFMDEFICKPLEKGFEDIF
Sbjct: 143 EVVREEKEVDMDYVVQFMDEFICKPLEKGFEDIF 176
BLAST of MELO3C013517 vs. NCBI nr
Match:
KAA0047875.1 (hypothetical protein E6C27_scaffold133G001450 [Cucumis melo var. makuwa])
HSP 1 Score: 295.4 bits (755), Expect = 2.8e-76
Identity = 151/154 (98.05%), Postives = 152/154 (98.70%), Query Frame = 0
Query: 1 HEFDKDRVLVLIELTKTSLSCQEETLQPIDAILINQTKPPNPDNSNQDIFHETSYDLATL 60
HEFDKDRVLVLIE TKTSLSCQEETLQPIDAILINQTKPPNPDNSNQDIFHETSYDLATL
Sbjct: 23 HEFDKDRVLVLIESTKTSLSCQEETLQPIDAILINQTKPPNPDNSNQDIFHETSYDLATL 82
Query: 61 LDDTTRESEEGDKEKEVPKETIDDPIQEEKEKLLEDVGEKSLPSPPKSIPEVVTWLDKLK 120
LDD TRESEEGDKEKEVPKETIDDPIQEEKEKLLEDVGEKSLPSPPKSIPEVVTWLDKLK
Sbjct: 83 LDDATRESEEGDKEKEVPKETIDDPIQEEKEKLLEDVGEKSLPSPPKSIPEVVTWLDKLK 142
Query: 121 EVVREEKEVDMDYVVQFMDEFICKPLEKGFEDIF 155
EVV+EEKEVDMDYVVQFMDEFICKPLEKGFEDIF
Sbjct: 143 EVVKEEKEVDMDYVVQFMDEFICKPLEKGFEDIF 176
BLAST of MELO3C013517 vs. NCBI nr
Match:
KAA0067524.1 (hypothetical protein E6C27_scaffold50G00470 [Cucumis melo var. makuwa] >TYK22422.1 hypothetical protein E5676_scaffold530G00170 [Cucumis melo var. makuwa])
HSP 1 Score: 165.2 bits (417), Expect = 4.3e-37
Identity = 87/132 (65.91%), Postives = 106/132 (80.30%), Query Frame = 0
Query: 23 EETLQPIDAILINQTKPPNPDNSNQDIFHETSYDLATLLDDTTRESEEGDKEKEVPKETI 82
+ET QPID I ++Q+K P+PD SNQDIFH+TS D LLDD TRES+EGDKEKEV +ETI
Sbjct: 94 KETPQPIDTIPLSQSKRPSPDTSNQDIFHKTSSDPVALLDDATRESKEGDKEKEVFEETI 153
Query: 83 DDPIQEEKEKLLEDVGEKSLPSPPKSIPEVVTWLDKLKEVVREEKEVDMDYVVQFMDEFI 142
+DP+Q EKE L +D EKSLP P +SIPE + L+K KE +REE+E D DYV +FMDEFI
Sbjct: 154 NDPLQGEKEYLPKDAREKSLPLPRRSIPEALKGLEKSKEAMREEEEADADYVFKFMDEFI 213
Query: 143 CKPLEKGFEDIF 155
CKPLE+GFE+IF
Sbjct: 214 CKPLERGFEEIF 225
BLAST of MELO3C013517 vs. NCBI nr
Match:
KAA0038892.1 (hypothetical protein E6C27_scaffold1170G00580 [Cucumis melo var. makuwa])
HSP 1 Score: 134.8 bits (338), Expect = 6.3e-28
Identity = 79/137 (57.66%), Postives = 97/137 (70.80%), Query Frame = 0
Query: 21 CQEETLQPIDAILINQTK----PPNPDNSNQDIFHETSYDLATLLDDTTRESEEGDKEKE 80
C E TL + I N+ K + +DIFHETS D ATLL D T+ES+EG+KEKE
Sbjct: 145 CTEPTLYCVITIHKNKAKLRHLKRKQEGQKEDIFHETSSDPATLLVDVTKESKEGEKEKE 204
Query: 81 VPKETIDDPIQEEKEKLLEDVGEKSLPSPPKSIPEVVTWLDKLKEVVREEKEVDMDYVVQ 140
V KET D+P+Q E E +D E+SLPSPPKSIP+ T LDKLK+VVREE EVD +Y +
Sbjct: 205 VLKETTDNPLQGETEVFPKDADERSLPSPPKSIPKASTRLDKLKKVVREE-EVDANYFFK 264
Query: 141 FMDEFICKPLEKGFEDI 154
FMD++ICKPLE+GFEDI
Sbjct: 265 FMDDYICKPLERGFEDI 280
BLAST of MELO3C013517 vs. NCBI nr
Match:
TYJ96034.1 (hypothetical protein E5676_scaffold2612G00500 [Cucumis melo var. makuwa])
HSP 1 Score: 134.0 bits (336), Expect = 1.1e-27
Identity = 73/107 (68.22%), Postives = 88/107 (82.24%), Query Frame = 0
Query: 47 QDIFHETSYDLATLLDDTTRESEEGDKEKEVPKETIDDPIQEEKEKLLEDVGEKSLPSPP 106
+DIFHETS D ATLL D T+ES+EG+KEKEV KETID+P+Q E E +D E+SLPSPP
Sbjct: 158 KDIFHETSSDPATLLVDVTKESKEGEKEKEVLKETIDNPLQGETEVFPKDADERSLPSPP 217
Query: 107 KSIPEVVTWLDKLKEVVREEKEVDMDYVVQFMDEFICKPLEKGFEDI 154
KSIP+ T LDKLK+VVREE EVD +Y +FMD++ICKPLE+GFEDI
Sbjct: 218 KSIPKASTRLDKLKKVVREE-EVDANYFFKFMDDYICKPLERGFEDI 263
BLAST of MELO3C013517 vs. ExPASy TrEMBL
Match:
A0A5D3BRW7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00470 PE=4 SV=1)
HSP 1 Score: 300.8 bits (769), Expect = 3.2e-78
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
Query: 1 HEFDKDRVLVLIELTKTSLSCQEETLQPIDAILINQTKPPNPDNSNQDIFHETSYDLATL 60
HEFDKDRVLVLIELTKTSLSCQEETLQPIDAILINQTKPPNPDNSNQDIFHETSYDLATL
Sbjct: 23 HEFDKDRVLVLIELTKTSLSCQEETLQPIDAILINQTKPPNPDNSNQDIFHETSYDLATL 82
Query: 61 LDDTTRESEEGDKEKEVPKETIDDPIQEEKEKLLEDVGEKSLPSPPKSIPEVVTWLDKLK 120
LDDTTRESEEGDKEKEVPKETIDDPIQEEKEKLLEDVGEKSLPSPPKSIPEVVTWLDKLK
Sbjct: 83 LDDTTRESEEGDKEKEVPKETIDDPIQEEKEKLLEDVGEKSLPSPPKSIPEVVTWLDKLK 142
Query: 121 EVVREEKEVDMDYVVQFMDEFICKPLEKGFEDIF 155
EVVREEKEVDMDYVVQFMDEFICKPLEKGFEDIF
Sbjct: 143 EVVREEKEVDMDYVVQFMDEFICKPLEKGFEDIF 176
BLAST of MELO3C013517 vs. ExPASy TrEMBL
Match:
A0A5A7U2H3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001450 PE=4 SV=1)
HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76
Identity = 151/154 (98.05%), Postives = 152/154 (98.70%), Query Frame = 0
Query: 1 HEFDKDRVLVLIELTKTSLSCQEETLQPIDAILINQTKPPNPDNSNQDIFHETSYDLATL 60
HEFDKDRVLVLIE TKTSLSCQEETLQPIDAILINQTKPPNPDNSNQDIFHETSYDLATL
Sbjct: 23 HEFDKDRVLVLIESTKTSLSCQEETLQPIDAILINQTKPPNPDNSNQDIFHETSYDLATL 82
Query: 61 LDDTTRESEEGDKEKEVPKETIDDPIQEEKEKLLEDVGEKSLPSPPKSIPEVVTWLDKLK 120
LDD TRESEEGDKEKEVPKETIDDPIQEEKEKLLEDVGEKSLPSPPKSIPEVVTWLDKLK
Sbjct: 83 LDDATRESEEGDKEKEVPKETIDDPIQEEKEKLLEDVGEKSLPSPPKSIPEVVTWLDKLK 142
Query: 121 EVVREEKEVDMDYVVQFMDEFICKPLEKGFEDIF 155
EVV+EEKEVDMDYVVQFMDEFICKPLEKGFEDIF
Sbjct: 143 EVVKEEKEVDMDYVVQFMDEFICKPLEKGFEDIF 176
BLAST of MELO3C013517 vs. ExPASy TrEMBL
Match:
A0A5D3DFQ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold530G00170 PE=4 SV=1)
HSP 1 Score: 165.2 bits (417), Expect = 2.1e-37
Identity = 87/132 (65.91%), Postives = 106/132 (80.30%), Query Frame = 0
Query: 23 EETLQPIDAILINQTKPPNPDNSNQDIFHETSYDLATLLDDTTRESEEGDKEKEVPKETI 82
+ET QPID I ++Q+K P+PD SNQDIFH+TS D LLDD TRES+EGDKEKEV +ETI
Sbjct: 94 KETPQPIDTIPLSQSKRPSPDTSNQDIFHKTSSDPVALLDDATRESKEGDKEKEVFEETI 153
Query: 83 DDPIQEEKEKLLEDVGEKSLPSPPKSIPEVVTWLDKLKEVVREEKEVDMDYVVQFMDEFI 142
+DP+Q EKE L +D EKSLP P +SIPE + L+K KE +REE+E D DYV +FMDEFI
Sbjct: 154 NDPLQGEKEYLPKDAREKSLPLPRRSIPEALKGLEKSKEAMREEEEADADYVFKFMDEFI 213
Query: 143 CKPLEKGFEDIF 155
CKPLE+GFE+IF
Sbjct: 214 CKPLERGFEEIF 225
BLAST of MELO3C013517 vs. ExPASy TrEMBL
Match:
A0A5A7T5Y0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1170G00580 PE=4 SV=1)
HSP 1 Score: 134.8 bits (338), Expect = 3.0e-28
Identity = 79/137 (57.66%), Postives = 97/137 (70.80%), Query Frame = 0
Query: 21 CQEETLQPIDAILINQTK----PPNPDNSNQDIFHETSYDLATLLDDTTRESEEGDKEKE 80
C E TL + I N+ K + +DIFHETS D ATLL D T+ES+EG+KEKE
Sbjct: 145 CTEPTLYCVITIHKNKAKLRHLKRKQEGQKEDIFHETSSDPATLLVDVTKESKEGEKEKE 204
Query: 81 VPKETIDDPIQEEKEKLLEDVGEKSLPSPPKSIPEVVTWLDKLKEVVREEKEVDMDYVVQ 140
V KET D+P+Q E E +D E+SLPSPPKSIP+ T LDKLK+VVREE EVD +Y +
Sbjct: 205 VLKETTDNPLQGETEVFPKDADERSLPSPPKSIPKASTRLDKLKKVVREE-EVDANYFFK 264
Query: 141 FMDEFICKPLEKGFEDI 154
FMD++ICKPLE+GFEDI
Sbjct: 265 FMDDYICKPLERGFEDI 280
BLAST of MELO3C013517 vs. ExPASy TrEMBL
Match:
A0A5D3BAP9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2612G00500 PE=4 SV=1)
HSP 1 Score: 134.0 bits (336), Expect = 5.2e-28
Identity = 73/107 (68.22%), Postives = 88/107 (82.24%), Query Frame = 0
Query: 47 QDIFHETSYDLATLLDDTTRESEEGDKEKEVPKETIDDPIQEEKEKLLEDVGEKSLPSPP 106
+DIFHETS D ATLL D T+ES+EG+KEKEV KETID+P+Q E E +D E+SLPSPP
Sbjct: 158 KDIFHETSSDPATLLVDVTKESKEGEKEKEVLKETIDNPLQGETEVFPKDADERSLPSPP 217
Query: 107 KSIPEVVTWLDKLKEVVREEKEVDMDYVVQFMDEFICKPLEKGFEDI 154
KSIP+ T LDKLK+VVREE EVD +Y +FMD++ICKPLE+GFEDI
Sbjct: 218 KSIPKASTRLDKLKKVVREE-EVDANYFFKFMDDYICKPLERGFEDI 263
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
TYK02157.1 | 6.6e-78 | 100.00 | hypothetical protein E5676_scaffold388G00470 [Cucumis melo var. makuwa] | [more] |
KAA0047875.1 | 2.8e-76 | 98.05 | hypothetical protein E6C27_scaffold133G001450 [Cucumis melo var. makuwa] | [more] |
KAA0067524.1 | 4.3e-37 | 65.91 | hypothetical protein E6C27_scaffold50G00470 [Cucumis melo var. makuwa] >TYK22422... | [more] |
KAA0038892.1 | 6.3e-28 | 57.66 | hypothetical protein E6C27_scaffold1170G00580 [Cucumis melo var. makuwa] | [more] |
TYJ96034.1 | 1.1e-27 | 68.22 | hypothetical protein E5676_scaffold2612G00500 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3BRW7 | 3.2e-78 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7U2H3 | 1.3e-76 | 98.05 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3DFQ1 | 2.1e-37 | 65.91 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7T5Y0 | 3.0e-28 | 57.66 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3BAP9 | 5.2e-28 | 68.22 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |