MELO3C013491 (gene) Melon (DHL92) v4

Overview


Name	MELO3C013491
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1
Location	chr11: 15068292 .. 15070355 (+)
RNA-Seq Expression	MELO3C013491
Synteny	MELO3C013491

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGAACATCCCAGCTCCATTCCGATTGCCTCTGCCCACCCCACCCCTCCCGCCTTCCACTCCTGCCCCACCATCACCATCATTAACGCTGCCACCTCTTCCTCCTCCTGCCACTTCAAGGTCTCAAGTAACAAATATGCCCAGTGATGAGTCAGAAATGGAGTCCTCAGAAGAGGTAACTTGCCTAGACCTGGTGAAACTTTTTCCTTTTTCTAGCTTGAATGAAATTCTGTCGTCAACTGGAGCCCAAAAGTCTGCTCTGACTAATACTAAAGGTGTATCCAAATAATGGTATGGCCATTTTTGTTTGGAACCTTCCCATATGAATCGGCTCGATTAATTTTGAGCTATGGTGTTGGGGATAACTCTTTAGTCTTTAAAGTTAAGACCTTGGCAACGGTTTTGCAAGCCTTTAGTAGTAGAAAGGACCTTTAGCAACAAATTTGTATAAACTTGTAGTGAGGTTATTTGGCCGACAGTCAACCCCTTTGAAGATCCTTTTTGTTTTGTTTTTGTGGAATCAGACAAAGCTAGGTCTCATTACACAAGAATTAAGGATTCCATTCTAAAAAAATCTTGGGACACCTCCACTCTGTCCCCTTTGAAGATGTATCAGAAGAAATAAAGCTACATCTCGGTGTAATTATTCACATTTTTTTATGTCCTACATTTTCTCTACACTCTTATCCAATTGGAGAACATGAGAAGTTTATTGTGAATCATTTGGATCGGACTCTCCCATTTTTATAAACTTCATGCATAAATGAAACTTGTTCTTAAAAAATTATTTTTCATAAATTTCCCCGCATATCCATAGGACCCTGTAAATCTGGTAATTTTTGTTGTTGTGGTTCAAAATTATACGAGCATGTCAGCAAAATTTATTTCTTTTATTCCATATGGACAATGATGTCAATCTTGTTGATGTTTTTATCATCTACAATTTTTAGGTGCATCATGTCCGTTTTTTTTACGTCAATAAATGCTTTCATGTCAATAAATGTTCTTTCCTTTGTTTTTGTGTTTTTAATTCTCCTGTATGGTTTTATTTTATATTCTATTCATTTCTTGTTCTAGGCTGTTTCTAGCTGAGATGAGGTATAATAATGTACTCCCATTTTTTCTTGGAACTTTCTGATTAATTGGATTTAAGTTTGCATCAGGATGTTGAAGGAAAATATAATTCAAGCGGAGTTTCAAAAACTGCAAAATCAGGATACAAGCGTCCTAGGTGTGAAACCATTGTAGGCCCTGGGATAGATAAAGATGTGGCTCATGAGGCTGTTGGGGTGAAACCTTCCACATTGGTTCCAAAAGAGATTCCTATGATAAAAAAGAAGAACCCCGTGATTCAGGTTGCGTTTATCATAAAACAGAACTAATTGGCATATGATCTTATTTATATGACTCCTCCAGATTCCCTTGTTTAATCGTTGCAGATTAGAATTGCCCCTAAAGTGATTCATGATGGAAAAGTTGATAAAACTAACAATGATGGTGAAGGGGCAGAAAAGGAAGCAGATGATCTTAAGCCATATGCAACACTCGAAGATTTAGAGAGAGGCAAATTGCCTCCAGAAGAAATTCTTTCGCTTCCAATGTTCAAGGTACTATACCATGTGATATTTTAATGTTTAAGTAGAGAAAATGCATGTTATTTGTCTTGGTTCATTAAAGCTCAATTTTTTAAAATAAAAAGGGAGCTTTGTTTTTAAGATGGTTAAACATGTTTTTTTAAACAGAAGCTTACCTCCTGTTTTGGGACGTGTGGCCTTGTTTGCTAGTGAAATATTTGTACTATAGTTTTATGACTTATCTTTTATCCCTTGTTAGGAAAGATATGAACCTCTCGATGCTGCTATTTTCAGTTTCTCTTTTGTTGGCCGCAATTGGGACATTGTTAGGAACAAATGTAGTACGAGATGCCATTTCCCCACATTGGTTAGAATGGGATGACTAATGCGGTACTTAAGTGGCTTGACTCTCCCAAATCCCACCCTAATATCTAGCTTTTGGGGTGTGGTTCTCCAAGGTGCTTAAGTACCTAATGATGGTACTAGAGCC

mRNA sequence

GATGAACATCCCAGCTCCATTCCGATTGCCTCTGCCCACCCCACCCCTCCCGCCTTCCACTCCTGCCCCACCATCACCATCATTAACGCTGCCACCTCTTCCTCCTCCTGCCACTTCAAGGTCTCAAGTAACAAATATGCCCAGTGATGAGTCAGAAATGGAGTCCTCAGAAGAGGATGTTGAAGGAAAATATAATTCAAGCGGAGTTTCAAAAACTGCAAAATCAGGATACAAGCGTCCTAGGTGTGAAACCATTGTAGGCCCTGGGATAGATAAAGATGTGGCTCATGAGGCTGTTGGGGTGAAACCTTCCACATTGGTTCCAAAAGAGATTCCTATGATAAAAAAGAAGAACCCCGTGATTCAGATTAGAATTGCCCCTAAAGTGATTCATGATGGAAAAGTTGATAAAACTAACAATGATGGTGAAGGGGCAGAAAAGGAAGCAGATGATCTTAAGCCATATGCAACACTCGAAGATTTAGAGAGAGGCAAATTGCCTCCAGAAGAAATTCTTTCGCTTCCAATGTTCAAGATATGAACCTCTCGATGCTGCTATTTTCAGTTTCTCTTTTGTTGGCCGCAATTGGGACATTGTTAGGAACAAATGTAGTACGAGATGCCATTTCCCCACATTGGTTAGAATGGGATGACTAATGCGGTACTTAAGTGGCTTGACTCTCCCAAATCCCACCCTAATATCTAGCTTTTGGGGTGTGGTTCTCCAAGGTGCTTAAGTACCTAATGATGGTACTAGAGCC

Coding sequence (CDS)

ATGAACATCCCAGCTCCATTCCGATTGCCTCTGCCCACCCCACCCCTCCCGCCTTCCACTCCTGCCCCACCATCACCATCATTAACGCTGCCACCTCTTCCTCCTCCTGCCACTTCAAGGTCTCAAGTAACAAATATGCCCAGTGATGAGTCAGAAATGGAGTCCTCAGAAGAGGATGTTGAAGGAAAATATAATTCAAGCGGAGTTTCAAAAACTGCAAAATCAGGATACAAGCGTCCTAGGTGTGAAACCATTGTAGGCCCTGGGATAGATAAAGATGTGGCTCATGAGGCTGTTGGGGTGAAACCTTCCACATTGGTTCCAAAAGAGATTCCTATGATAAAAAAGAAGAACCCCGTGATTCAGATTAGAATTGCCCCTAAAGTGATTCATGATGGAAAAGTTGATAAAACTAACAATGATGGTGAAGGGGCAGAAAAGGAAGCAGATGATCTTAAGCCATATGCAACACTCGAAGATTTAGAGAGAGGCAAATTGCCTCCAGAAGAAATTCTTTCGCTTCCAATGTTCAAGATATGA

Protein sequence

MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDVEGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPVIQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFKI

Homology

[Close]

BLAST of MELO3C013491 vs. ExPASy Swiss-Prot
Match: Q8RWV8 (U11/U12 small nuclear ribonucleoprotein 65 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP65 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 6.9e-29
Identity = 86/180 (47.78%), Postives = 109/180 (60.56%), Query Frame = 0


Query: 1   MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 60
           MN+P PFRL LPTPPLP + P                  ++ + +  S ESEMES E+  
Sbjct: 192 MNLPPPFRLALPTPPLPKAGP-----------------QQTDLEHQSSSESEMESDED-- 251

Query: 61  EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 120
                      T+KSG KR R   +VG G+DKDV HE VGVKPS+L PKEIP I+K   V
Sbjct: 252 ---------IGTSKSGRKRARHGFLVGLGMDKDVPHETVGVKPSSLTPKEIPRIRKNKHV 311

Query: 121 IQIRIAPKVIHDG-KVDKTNNDGEGAEKEAD-DLKPYATLEDLERGKLPPEEILSLPMFK 179
           +QI+I  KV  D  K +  N D     KE D +LKP+A+LE+LE+G+LPP++ILSLPMFK
Sbjct: 312 MQIKITSKVTQDEYKEESENEDPADEPKEKDSNLKPFASLEELEKGRLPPQDILSLPMFK 343

[Close]

BLAST of MELO3C013491 vs. NCBI nr
Match: XP_008448180.1 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X4 [Cucumis melo])

HSP 1 Score: 336.7 bits (862), Expect = 1.3e-88
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 60
           MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV
Sbjct: 84  MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 143

Query: 61  EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 120
           EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV
Sbjct: 144 EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 203

Query: 121 IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK 179
           IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK
Sbjct: 204 IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK 261

[Close]

BLAST of MELO3C013491 vs. NCBI nr
Match: XP_008448179.1 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X3 [Cucumis melo])

HSP 1 Score: 336.7 bits (862), Expect = 1.3e-88
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 60
           MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV
Sbjct: 84  MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 143

Query: 61  EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 120
           EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV
Sbjct: 144 EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 203

Query: 121 IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK 179
           IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK
Sbjct: 204 IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK 261

[Close]

BLAST of MELO3C013491 vs. NCBI nr
Match: XP_008448186.1 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X9 [Cucumis melo])

HSP 1 Score: 336.7 bits (862), Expect = 1.3e-88
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 60
           MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV
Sbjct: 84  MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 143

Query: 61  EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 120
           EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV
Sbjct: 144 EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 203

Query: 121 IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK 179
           IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK
Sbjct: 204 IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK 261

[Close]

BLAST of MELO3C013491 vs. NCBI nr
Match: XP_008448182.1 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X5 [Cucumis melo])

HSP 1 Score: 336.7 bits (862), Expect = 1.3e-88
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 60
           MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV
Sbjct: 84  MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 143

Query: 61  EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 120
           EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV
Sbjct: 144 EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 203

Query: 121 IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK 179
           IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK
Sbjct: 204 IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK 261

[Close]

BLAST of MELO3C013491 vs. NCBI nr
Match: XP_016900537.1 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X8 [Cucumis melo])

HSP 1 Score: 336.7 bits (862), Expect = 1.3e-88
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 60
           MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV
Sbjct: 84  MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 143

Query: 61  EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 120
           EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV
Sbjct: 144 EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 203

Query: 121 IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK 179
           IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK
Sbjct: 204 IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK 261

[Close]

BLAST of MELO3C013491 vs. ExPASy TrEMBL
Match: A0A1S3BIH7 (U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490451 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 6.1e-89
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 60
           MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV
Sbjct: 84  MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 143

Query: 61  EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 120
           EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV
Sbjct: 144 EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 203

Query: 121 IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK 179
           IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK
Sbjct: 204 IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK 261

[Close]

BLAST of MELO3C013491 vs. ExPASy TrEMBL
Match: A0A5D3CT62 (U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1275G00120 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 6.1e-89
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 60
           MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV
Sbjct: 283 MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 342

Query: 61  EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 120
           EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV
Sbjct: 343 EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 402

Query: 121 IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK 179
           IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK
Sbjct: 403 IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK 460

[Close]

BLAST of MELO3C013491 vs. ExPASy TrEMBL
Match: A0A1S3BJQ3 (U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X6 OS=Cucumis melo OX=3656 GN=LOC103490451 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 6.1e-89
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 60
           MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV
Sbjct: 4   MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 63

Query: 61  EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 120
           EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV
Sbjct: 64  EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 123

Query: 121 IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK 179
           IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK
Sbjct: 124 IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK 181

[Close]

BLAST of MELO3C013491 vs. ExPASy TrEMBL
Match: A0A1S3BJ40 (U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X4 OS=Cucumis melo OX=3656 GN=LOC103490451 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 6.1e-89
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 60
           MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV
Sbjct: 84  MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 143

Query: 61  EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 120
           EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV
Sbjct: 144 EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 203

Query: 121 IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK 179
           IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK
Sbjct: 204 IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK 261

[Close]

BLAST of MELO3C013491 vs. ExPASy TrEMBL
Match: A0A1S4DX29 (U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X8 OS=Cucumis melo OX=3656 GN=LOC103490451 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 6.1e-89
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 60
           MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV
Sbjct: 84  MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 143

Query: 61  EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 120
           EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV
Sbjct: 144 EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 203

Query: 121 IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK 179
           IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK
Sbjct: 204 IQIRIAPKVIHDGKVDKTNNDGEGAEKEADDLKPYATLEDLERGKLPPEEILSLPMFK 261

[Close]

BLAST of MELO3C013491 vs. TAIR 10
Match: AT1G09230.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 128.6 bits (322), Expect = 4.9e-30
Identity = 86/180 (47.78%), Postives = 109/180 (60.56%), Query Frame = 0


Query: 1   MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDV 60
           MN+P PFRL LPTPPLP + P                  ++ + +  S ESEMES E+  
Sbjct: 192 MNLPPPFRLALPTPPLPKAGP-----------------QQTDLEHQSSSESEMESDED-- 251

Query: 61  EGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPV 120
                      T+KSG KR R   +VG G+DKDV HE VGVKPS+L PKEIP I+K   V
Sbjct: 252 ---------IGTSKSGRKRARHGFLVGLGMDKDVPHETVGVKPSSLTPKEIPRIRKNKHV 311

Query: 121 IQIRIAPKVIHDG-KVDKTNNDGEGAEKEAD-DLKPYATLEDLERGKLPPEEILSLPMFK 179
           +QI+I  KV  D  K +  N D     KE D +LKP+A+LE+LE+G+LPP++ILSLPMFK
Sbjct: 312 MQIKITSKVTQDEYKEESENEDPADEPKEKDSNLKPFASLEELEKGRLPPQDILSLPMFK 343

The following BLAST results are available for this feature:

BLAST of MELO3C013491 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWV8	6.9e-29	47.78	U11/U12 small nuclear ribonucleoprotein 65 kDa protein OS=Arabidopsis thaliana O...	[more]

BLAST of MELO3C013491 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448180.1	1.3e-88	100.00	PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X4 [Cu...	[more]
XP_008448179.1	1.3e-88	100.00	PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X3 [Cu...	[more]
XP_008448186.1	1.3e-88	100.00	PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X9 [Cu...	[more]
XP_008448182.1	1.3e-88	100.00	PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X5 [Cu...	[more]
XP_016900537.1	1.3e-88	100.00	PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X8 [Cu...	[more]

BLAST of MELO3C013491 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BIH7	6.1e-89	100.00	U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1 OS=Cucumis mel...	[more]
A0A5D3CT62	6.1e-89	100.00	U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1 OS=Cucumis mel...	[more]
A0A1S3BJQ3	6.1e-89	100.00	U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X6 OS=Cucumis mel...	[more]
A0A1S3BJ40	6.1e-89	100.00	U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X4 OS=Cucumis mel...	[more]
A0A1S4DX29	6.1e-89	100.00	U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X8 OS=Cucumis mel...	[more]

BLAST of MELO3C013491 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09230.1	4.9e-30	47.78	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..160
None	No IPR available	PANTHER	PTHR16105:SF0	RNA-BINDING REGION-CONTAINING PROTEIN 3	coord: 1..178
None	No IPR available	PANTHER	PTHR16105	UNCHARACTERIZED	coord: 1..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C013491.1	MELO3C013491.1	mRNA