MELO3C013435.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C013435.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionNuclear polyadenylated RNA-binding protein 3-like
Locationchr01: 17407277 .. 17408387 (+)
RNA-Seq ExpressionMELO3C013435.jh1
SyntenyMELO3C013435.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAAAAAAGAAAAGAACGACTGTAAAACCAAAACCACAACCAACAATTTCTCCTCTCGAATCAATTTCTCAAATCGGAGCGATCATGGAGGCCGTTTCTGGATCATCATCTTCTTCTTCTATGGAATTTGTGTTTTATGATGATTTCGAATATGAATTCGTTGAAGACATCGAACGTCTTTCTAACTGGGAGTTGCTCGATGCTTTTGATGCCGATTCAGAAATGGGCGGAAATGGAGGGGAAGAACAAGGGGAAAATTACAGCGTCGACGATAATGTTTCTCAAGATCTTCGAGAAATGATTTCTCCCGTTCTCGCAGTGCCGATTTCGCTTGTGGAGGATCGAATCGACGGTTCGTTGGAAGATGCTTGTTTCCTTCACAATCAAGCGGAAGACGGTTTTGCGTATGGTTATGACGATGCGGAGGAGGAAGATGAAGTGGATGATGATGAGGAGGATGAGTTCGATTTGGATGATGAACTCGTTCCGTGGTCTGTTAGTGACAAACTCGGACGGCAGAGGATGAGGAAATTGGGGAAAAGAGGTTTTACGAAGATGTATAATTCGAAGAGATCTCCGTTTTTGTTCACCAAGCCAGGATGTGTCCGCGGCAAACACGGACTCGGCTTGAAACACAGCTATTAGAACAAGAACAGATTCATGAACTCTGCTTGCCTTAAAAAGGTAATCGACTCTAAGTCCAATTTGGCGTAGAAGTAAATACTAAATAGATGTAATAATTAAATCCTAAAAACTAGTAGTTTCGTTTGTTGTAAGTAGCAGCAGTATTAGTAATAGTCCCTGTAAATCCAATTTGCCGGGATGGTTTTCTGTTGATTTACAAGGCTTGGATTAAGGAAGAACACATTAACTCAAATTTCATCTTTGTGAAATTAATCAATCATTTGTCTATATTCTCCTAAGTTATGTCCTCCACGAGAATCGTTATGCTAATTACTATATTCTTTGTTGGATTAGCTGTTTTGTTTGCTACACTCTAAATTCATCTTTTGTGGTTCATGTAATTTGTCACAAAAATCTGGAATCTGGGCCATACCCTCTGAACAATTGATAATGATTTCGTATCATTTCTCTAAGTATGTTAAATGGA

mRNA sequence

GCAAAAAAGAAAAGAACGACTGTAAAACCAAAACCACAACCAACAATTTCTCCTCTCGAATCAATTTCTCAAATCGGAGCGATCATGGAGGCCGTTTCTGGATCATCATCTTCTTCTTCTATGGAATTTGTGTTTTATGATGATTTCGAATATGAATTCGTTGAAGACATCGAACGTCTTTCTAACTGGGAGTTGCTCGATGCTTTTGATGCCGATTCAGAAATGGGCGGAAATGGAGGGGAAGAACAAGGGGAAAATTACAGCGTCGACGATAATGTTTCTCAAGATCTTCGAGAAATGATTTCTCCCGTTCTCGCAGTGCCGATTTCGCTTGTGGAGGATCGAATCGACGGTTCGTTGGAAGATGCTTGTTTCCTTCACAATCAAGCGGAAGACGGTTTTGCGTATGGTTATGACGATGCGGAGGAGGAAGATGAAGTGGATGATGATGAGGAGGATGAGTTCGATTTGGATGATGAACTCGTTCCGTGGTCTGTTAGTGACAAACTCGGACGGCAGAGGATGAGGAAATTGGGGAAAAGAGGTTTTACGAAGATGTATAATTCGAAGAGATCTCCGTTTTTGTTCACCAAGCCAGGATGTGTCCGCGGCAAACACGGACTCGGCTTGAAACACAGCTATTAGAACAAGAACAGATTCATGAACTCTGCTTGCCTTAAAAAGGTAATCGACTCTAAGTCCAATTTGGCGTAGAAGTAAATACTAAATAGATGTAATAATTAAATCCTAAAAACTAGTAGTTTCGTTTGTTGTAAGTAGCAGCAGTATTAGTAATAGTCCCTGTAAATCCAATTTGCCGGGATGGTTTTCTGTTGATTTACAAGGCTTGGATTAAGGAAGAACACATTAACTCAAATTTCATCTTTGTGAAATTAATCAATCATTTGTCTATATTCTCCTAAGTTATGTCCTCCACGAGAATCGTTATGCTAATTACTATATTCTTTGTTGGATTAGCTGTTTTGTTTGCTACACTCTAAATTCATCTTTTGTGGTTCATGTAATTTGTCACAAAAATCTGGAATCTGGGCCATACCCTCTGAACAATTGATAATGATTTCGTATCATTTCTCTAAGTATGTTAAATGGA

Coding sequence (CDS)

ATGGAGGCCGTTTCTGGATCATCATCTTCTTCTTCTATGGAATTTGTGTTTTATGATGATTTCGAATATGAATTCGTTGAAGACATCGAACGTCTTTCTAACTGGGAGTTGCTCGATGCTTTTGATGCCGATTCAGAAATGGGCGGAAATGGAGGGGAAGAACAAGGGGAAAATTACAGCGTCGACGATAATGTTTCTCAAGATCTTCGAGAAATGATTTCTCCCGTTCTCGCAGTGCCGATTTCGCTTGTGGAGGATCGAATCGACGGTTCGTTGGAAGATGCTTGTTTCCTTCACAATCAAGCGGAAGACGGTTTTGCGTATGGTTATGACGATGCGGAGGAGGAAGATGAAGTGGATGATGATGAGGAGGATGAGTTCGATTTGGATGATGAACTCGTTCCGTGGTCTGTTAGTGACAAACTCGGACGGCAGAGGATGAGGAAATTGGGGAAAAGAGGTTTTACGAAGATGTATAATTCGAAGAGATCTCCGTTTTTGTTCACCAAGCCAGGATGTGTCCGCGGCAAACACGGACTCGGCTTGAAACACAGCTATTAG

Protein sequence

MEAVSGSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Homology
BLAST of MELO3C013435.jh1 vs. NCBI nr
Match: KAA0033784.1 (nuclear polyadenylated RNA-binding protein 3-like [Cucumis melo var. makuwa] >TYK22350.1 nuclear polyadenylated RNA-binding protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 367 bits (941), Expect = 8.19e-128
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0

Query: 1   MEAVSGSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYS 60
           MEAVSGSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYS
Sbjct: 1   MEAVSGSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYS 60

Query: 61  VDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDDAEEEDEVD 120
           VDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDDAEEEDEVD
Sbjct: 61  VDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDDAEEEDEVD 120

Query: 121 DDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGL 180
           DDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGL
Sbjct: 121 DDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGL 180

Query: 181 GLKHSY 186
           GLKHSY
Sbjct: 181 GLKHSY 186

BLAST of MELO3C013435.jh1 vs. NCBI nr
Match: XP_008448068.1 (PREDICTED: uncharacterized protein LOC103490356 [Cucumis melo])

HSP 1 Score: 358 bits (918), Expect = 3.50e-124
Identity = 185/194 (95.36%), Postives = 186/194 (95.88%), Query Frame = 0

Query: 1   MEAVSGSSSSSS--------MEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGG 60
           MEAVSGSSSSSS        MEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGG
Sbjct: 1   MEAVSGSSSSSSSSSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGG 60

Query: 61  EEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDD 120
           EEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDD
Sbjct: 61  EEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDD 120

Query: 121 AEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPG 180
           AEEEDEVDD+EEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPG
Sbjct: 121 AEEEDEVDDEEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPG 180

Query: 181 CVRGKHGLGLKHSY 186
           CVRGKHGLGLKHSY
Sbjct: 181 CVRGKHGLGLKHSY 194

BLAST of MELO3C013435.jh1 vs. NCBI nr
Match: XP_011658549.2 (uncharacterized protein LOC101212092 [Cucumis sativus] >KAE8645645.1 hypothetical protein Csa_020485 [Cucumis sativus])

HSP 1 Score: 339 bits (870), Expect = 2.01e-116
Identity = 179/188 (95.21%), Postives = 181/188 (96.28%), Query Frame = 0

Query: 1   MEAVSGSSSSSS--MEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGEN 60
           MEA+SGSSSSSS  MEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQG N
Sbjct: 37  MEAISGSSSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGGN 96

Query: 61  YSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDDAEEEDE 120
            SVDDNVSQDLREMISPVLAVPISLVEDRID SLEDA FLHNQAEDGFAYGY+DAEEEDE
Sbjct: 97  CSVDDNVSQDLREMISPVLAVPISLVEDRIDCSLEDAYFLHNQAEDGFAYGYNDAEEEDE 156

Query: 121 VDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKH 180
           VDDDE DEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKH
Sbjct: 157 VDDDE-DEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKH 216

Query: 181 GLGLKHSY 186
           GLGLKHSY
Sbjct: 217 GLGLKHSY 223

BLAST of MELO3C013435.jh1 vs. NCBI nr
Match: XP_038886897.1 (uncharacterized protein LOC120077100 [Benincasa hispida])

HSP 1 Score: 292 bits (748), Expect = 2.07e-98
Identity = 160/191 (83.77%), Postives = 168/191 (87.96%), Query Frame = 0

Query: 1   MEAVSGSSSSSSME--FVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGEN 60
           MEA+SGSSSSSS+   FVF DDFEYEFVEDIERLSNWELLDAFDADSEM GNG EEQGEN
Sbjct: 1   MEAISGSSSSSSISWGFVFCDDFEYEFVEDIERLSNWELLDAFDADSEMDGNGSEEQGEN 60

Query: 61  YSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDDA---EE 120
            SVDD V +DLREMI     VPISLVEDRIDGSLED  FL NQAED FAYGY+D+   EE
Sbjct: 61  CSVDDRVYEDLREMI-----VPISLVEDRIDGSLEDIFFLQNQAEDTFAYGYNDSAEEEE 120

Query: 121 EDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVR 180
           E+E+D D+ DEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVR
Sbjct: 121 EEEIDGDD-DEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVR 180

Query: 181 GKHGLGLKHSY 186
           GKHGLGLKHSY
Sbjct: 181 GKHGLGLKHSY 185

BLAST of MELO3C013435.jh1 vs. NCBI nr
Match: XP_023553634.1 (histone H2A.Z-specific chaperone CHZ1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281 bits (719), Expect = 7.90e-94
Identity = 149/196 (76.02%), Postives = 165/196 (84.18%), Query Frame = 0

Query: 1   MEAVSG--SSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGEN 60
           MEA+SG  SSSSSS+EF FYDDFEYEFVED+ERLSNWE L+A DADSEM GNGGE++G+N
Sbjct: 1   MEAMSGASSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKN 60

Query: 61  YSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDDAEEE-- 120
             V   + +DLRE+ISPV+ VPISL EDRI   LED  FL N AEDGFAYGY+DAEE+  
Sbjct: 61  CCVVARIPEDLREIISPVVVVPISLAEDRIFDPLEDVYFLQNHAEDGFAYGYNDAEEDEP 120

Query: 121 ------DEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTK 180
                 D+ DDD+EDE DLDDELVPWSVSDKLGRQRMRKLGKRGFT+MYNSKRSPFLFTK
Sbjct: 121 DKDDDDDDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTK 180

Query: 181 PGCVRGKHGLGLKHSY 186
           PGCVRGKHGLGLKHSY
Sbjct: 181 PGCVRGKHGLGLKHSY 196

BLAST of MELO3C013435.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SRG7 (Nuclear polyadenylated RNA-binding protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00680 PE=4 SV=1)

HSP 1 Score: 367 bits (941), Expect = 3.97e-128
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0

Query: 1   MEAVSGSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYS 60
           MEAVSGSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYS
Sbjct: 1   MEAVSGSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGENYS 60

Query: 61  VDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDDAEEEDEVD 120
           VDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDDAEEEDEVD
Sbjct: 61  VDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDDAEEEDEVD 120

Query: 121 DDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGL 180
           DDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGL
Sbjct: 121 DDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGL 180

Query: 181 GLKHSY 186
           GLKHSY
Sbjct: 181 GLKHSY 186

BLAST of MELO3C013435.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BJG2 (uncharacterized protein LOC103490356 OS=Cucumis melo OX=3656 GN=LOC103490356 PE=4 SV=1)

HSP 1 Score: 358 bits (918), Expect = 1.69e-124
Identity = 185/194 (95.36%), Postives = 186/194 (95.88%), Query Frame = 0

Query: 1   MEAVSGSSSSSS--------MEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGG 60
           MEAVSGSSSSSS        MEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGG
Sbjct: 1   MEAVSGSSSSSSSSSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGG 60

Query: 61  EEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDD 120
           EEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDD
Sbjct: 61  EEQGENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDD 120

Query: 121 AEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPG 180
           AEEEDEVDD+EEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPG
Sbjct: 121 AEEEDEVDDEEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPG 180

Query: 181 CVRGKHGLGLKHSY 186
           CVRGKHGLGLKHSY
Sbjct: 181 CVRGKHGLGLKHSY 194

BLAST of MELO3C013435.jh1 vs. ExPASy TrEMBL
Match: A0A0A0K4F3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004150 PE=4 SV=1)

HSP 1 Score: 339 bits (870), Expect = 2.75e-117
Identity = 179/188 (95.21%), Postives = 181/188 (96.28%), Query Frame = 0

Query: 1   MEAVSGSSSSSS--MEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGEN 60
           MEA+SGSSSSSS  MEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQG N
Sbjct: 1   MEAISGSSSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGGN 60

Query: 61  YSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDDAEEEDE 120
            SVDDNVSQDLREMISPVLAVPISLVEDRID SLEDA FLHNQAEDGFAYGY+DAEEEDE
Sbjct: 61  CSVDDNVSQDLREMISPVLAVPISLVEDRIDCSLEDAYFLHNQAEDGFAYGYNDAEEEDE 120

Query: 121 VDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKH 180
           VDDDE DEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKH
Sbjct: 121 VDDDE-DEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKH 180

Query: 181 GLGLKHSY 186
           GLGLKHSY
Sbjct: 181 GLGLKHSY 187

BLAST of MELO3C013435.jh1 vs. ExPASy TrEMBL
Match: A0A6J1I004 (uncharacterized protein LOC111468462 OS=Cucurbita maxima OX=3661 GN=LOC111468462 PE=4 SV=1)

HSP 1 Score: 278 bits (712), Expect = 4.45e-93
Identity = 149/196 (76.02%), Postives = 163/196 (83.16%), Query Frame = 0

Query: 1   MEAVSG-----SSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQ 60
           MEA+SG     SSSSSS+EF FYDDFEYEFVED+ERLSNWE L+A DADSEM GNGGE++
Sbjct: 1   MEAMSGASSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKE 60

Query: 61  GENYSVDDNVSQDLREMISPVLAVPISLVEDRIDGSLEDACFLHNQAEDGFAYGYDDAEE 120
           G+N  V   + +DL EMISPV+ VPISL EDRI   LED  FL N AEDGFAYGY+DAEE
Sbjct: 61  GKNCCVVARIPEDLLEMISPVVVVPISLAEDRIFDPLEDVYFLQNHAEDGFAYGYNDAEE 120

Query: 121 E-----DEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTK 180
           +     D  DDD+EDE DLDDELVPWSVSDKLGRQRMRKLGKRGFT+MYNSKRSPFLFTK
Sbjct: 121 DETDKDDGDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTK 180

Query: 181 PGCVRGKHGLGLKHSY 186
           PGCVRGKHGLGLKHSY
Sbjct: 181 PGCVRGKHGLGLKHSY 196

BLAST of MELO3C013435.jh1 vs. ExPASy TrEMBL
Match: A0A6J1F1D0 (NAD-dependent protein deacetylase HST1-like OS=Cucurbita moschata OX=3662 GN=LOC111441242 PE=4 SV=1)

HSP 1 Score: 241 bits (616), Expect = 2.07e-78
Identity = 141/201 (70.15%), Postives = 159/201 (79.10%), Query Frame = 0

Query: 1   MEAVSG--SSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGE----- 60
           MEA SG  SSSSSS+EFVF+DD EYEFVE++ERLSNWELLDA DAD E+ GNG E     
Sbjct: 1   MEAPSGAASSSSSSVEFVFHDDLEYEFVEEVERLSNWELLDASDADFEIDGNGDEQEEEE 60

Query: 61  ---EQGENYSVDDNVSQDLREMISPVLAVPIS-LVEDRIDGSLEDACFLHNQAEDGFAYG 120
              E+GE+ SVD  V +DLR     V+A+PIS LVE+RIDG  +D   L NQ E+GFAYG
Sbjct: 61  EEEEEGESCSVDVRVPKDLRG--KRVVAMPISSLVEERIDGPFDDVYLLQNQVENGFAYG 120

Query: 121 YDDAEEE----DEVDDDEE-DEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRS 180
            +D EE+    D VDDD++ DE DLDDELVPWSVSDKLGRQRMRKLGKRGFT+MYNSKRS
Sbjct: 121 CNDLEEDESDDDVVDDDDDGDECDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRS 180

Query: 181 PFLFTKPGCVRGKHGLGLKHS 185
           PFLFTKPGCVRGKHGLGLKHS
Sbjct: 181 PFLFTKPGCVRGKHGLGLKHS 199

BLAST of MELO3C013435.jh1 vs. TAIR 10
Match: AT4G34630.1 (unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 85.9 bits (211), Expect = 3.8e-17
Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 0

Query: 105 GFAYGYDDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRS 164
           G  YG D   ++ E D + +D +DLD+ELVP SVS K+GRQRMRKLGKR   K+Y SK S
Sbjct: 121 GITYG-DSVNDDGEEDREYDDSYDLDEELVPRSVSKKVGRQRMRKLGKRAIAKVYASKIS 180

Query: 165 PFLFTKPGCVRGKHGLGLK 184
           PFL  KPG VRGKHGLG+K
Sbjct: 181 PFL--KPGIVRGKHGLGMK 196

BLAST of MELO3C013435.jh1 vs. TAIR 10
Match: AT5G48420.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 1.3e-06
Identity = 39/100 (39.00%), Postives = 50/100 (50.00%), Query Frame = 0

Query: 86  DRIDGSLEDACFLHNQAEDGFAYGYDDAEEEDEVDDDEEDEFDLDDELVPWSVSDKLGRQ 145
           DR+DG     C       +   Y   D    D  D DEED+FD  D+L       K+  Q
Sbjct: 44  DRVDGGC--ICSRMVSLCEDSRYSVKDGINRDGYDTDEEDDFDYYDDLDDDHELVKI--Q 103

Query: 146 RMRKLGKRGFTKMYNSKRSPFLFT--KPGCVRGKHGLGLK 184
           R+RK GKR F K    K+  + ++  KPGCV GKHGL +K
Sbjct: 104 RIRKTGKRTFWKNVTLKKKKYSYSQLKPGCVHGKHGLDIK 139

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0033784.18.19e-128100.00nuclear polyadenylated RNA-binding protein 3-like [Cucumis melo var. makuwa] >TY... [more]
XP_008448068.13.50e-12495.36PREDICTED: uncharacterized protein LOC103490356 [Cucumis melo][more]
XP_011658549.22.01e-11695.21uncharacterized protein LOC101212092 [Cucumis sativus] >KAE8645645.1 hypothetica... [more]
XP_038886897.12.07e-9883.77uncharacterized protein LOC120077100 [Benincasa hispida][more]
XP_023553634.17.90e-9476.02histone H2A.Z-specific chaperone CHZ1-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SRG73.97e-128100.00Nuclear polyadenylated RNA-binding protein 3-like OS=Cucumis melo var. makuwa OX... [more]
A0A1S3BJG21.69e-12495.36uncharacterized protein LOC103490356 OS=Cucumis melo OX=3656 GN=LOC103490356 PE=... [more]
A0A0A0K4F32.75e-11795.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004150 PE=4 SV=1[more]
A0A6J1I0044.45e-9376.02uncharacterized protein LOC111468462 OS=Cucurbita maxima OX=3661 GN=LOC111468462... [more]
A0A6J1F1D02.07e-7870.15NAD-dependent protein deacetylase HST1-like OS=Cucurbita moschata OX=3662 GN=LOC... [more]
Match NameE-valueIdentityDescription
AT4G34630.13.8e-1762.03unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bac... [more]
AT5G48420.11.3e-0639.00unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR48213VID27-LIKE PROTEINcoord: 18..186

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013435.jh1.t1MELO3C013435.jh1.t1mRNA