MELO3C013418.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDSstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.AGCCAAAATGATACCCTTCTTCATGATGTTCGCTGGAGGTCCTCTGGGATCTGGAAAACAATGGTAACACTCTATCTAGAACATGATTAACGCATATTTCATTTCAATTGAGCTAAGCACACTTTCAGTTATGAACCGAATAACTGTAGCCGGAAATCGAGTATCTTTCTTTCCAGTTTTTAAAATCTAATTTCAAAATTCCAAAATCTCAAAATCTTTATTATTATTATTATCATTACCATTATTGTTATTATTATTTTAAGTTTTTAACAATGAGAGTGAAAAGGTAATTGGAGAGTTGGAAGAGGAAAAAAAAATGTCAAAGGGATATTCGTATTTTCAACCTCTTCTCAAAATAAAAGAGTAGAAAAAGAAAAATAAACTTTTGTGTTTTTTCCCCCAAAAGAAAACATTTCTAGCCTTGACAATCCAATTTTAGGTTTTTCTTTTTGTGATAATTAATTAGCCCTGCTGAAGGTTCATTGGACCCTTTTTCTTCTTCTTAAAAGTAGTATTATAAAAATTGGTAACGCAGGTTTTCGTGGATTCATTTGGATGACATTGTGAACTTAATATATGAAGCTCTGATCAATCCATCTTATCATGGTTATACTTTCATTCTAACACACTCGCAGAATAAATACATTATAAACATAAACAACTAAAATACAATTTCAAGTACTGGCAAAATAATAACTAAGTTTAGGTTAATATTAGTTTTCATTAATTAGTTATTTTGACTATCAATCAGTACATAGTTTTGTAATGACCCTTTTGGTTTCGTTTTTGCATTTCTAGTATTGTTTTAAATCTAAGAAGCTGGTATAGGGTAATTTGTTAATTAAATTAAATAAAGGGCTCTTTGAAAAAAAAAAGCAAAAAGGCAAAGAAAAAAAAAACAAATATATATAATGAATTTCACTATTATTTGTAGGGACAATTTTATTGTATTTTATTATATTTGTAAATAATTTTGTCATTTAAAATAATTTTTATAATAATAATAATAATAATAGAAAACAGGGGTTATAAATGGAACAGCACCGAAGCCAGTTACGTTGGGTGAATTATGTAAAGGATTGGGAGCTGAGATGGGAAGACCTTCATGGCTCCCCCAGTACCTGACTTTGCTCTCAAAGCCATACTTGGATAAGGAGCTTCTGTGGTTCGTCACAATCCCACTCCTTACCCTTTCTTTTTCTTTTCTTTTTAAATACAAAATTCTATTTTTCCAAAGTTCGTCATTTTCCATTCTAAATTCATGTCCAATAGGGTTTTGGCAGGGCAAAGGGTGGTTCCTACCAGAGCCAAGGAATTGGGTTTTTCGTATAAGTACCCCTCTGTGAAGGACGCACTCAAGTCCATTCTTTCCTAAGCTCAATTATGAACAAAATTGGCCACAGCAATTGTTTCTTAATTGTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTGATGAAATTTTTTATTTAGTTGTGTTGTAAATTCGATTTTGGTATGAAATGGAATGATGCAAAGATTAAAATTGTAGTGTAGTGGAGAAGGAGAACAAATAATTGCTCATGATTTATAAATTTATGGACACAAAGCGAGGTGTAAGGCATGGCATGACTT AGCCAAAATGATACCCTTCTTCATGATGTTCGCTGGAGGTCCTCTGGGATCTGGAAAACAATGGGGTTATAAATGGAACAGCACCGAAGCCAGTTACGTTGGGTGAATTATGTAAAGGATTGGGAGCTGAGATGGGAAGACCTTCATGGCTCCCCCAGTACCTGACTTTGCTCTCAAAGCCATACTTGGATAAGGAGCTTCTGTGGGTTTTGGCAGGGCAAAGGGTGGTTCCTACCAGAGCCAAGGAATTGGGTTTTTCGTATAAGTACCCCTCTGTGAAGGACGCACTCAAGTCCATTCTTTCCTAAGCTCAATTATGAACAAAATTGGCCACAGCAATTGTTTCTTAATTGTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTGATGAAATTTTTTATTTAGTTGTGTTGTAAATTCGATTTTGGTATGAAATGGAATGATGCAAAGATTAAAATTGTAGTGTAGTGGAGAAGGAGAACAAATAATTGCTCATGATTTATAAATTTATGGACACAAAGCGAGGTGTAAGGCATGGCATGACTT ATGGGAAGACCTTCATGGCTCCCCCAGTACCTGACTTTGCTCTCAAAGCCATACTTGGATAAGGAGCTTCTGTGGGTTTTGGCAGGGCAAAGGGTGGTTCCTACCAGAGCCAAGGAATTGGGTTTTTCGTATAAGTACCCCTCTGTGAAGGACGCACTCAAGTCCATTCTTTCCTAA MGRPSWLPQYLTLLSKPYLDKELLWVLAGQRVVPTRAKELGFSYKYPSVKDALKSILS Homology
BLAST of MELO3C013418.jh1 vs. NCBI nr
Match: XP_008444867.1 (PREDICTED: epimerase family protein SDR39U1 homolog, chloroplastic-like [Cucumis melo]) HSP 1 Score: 75.9 bits (185), Expect = 2.44e-14 Identity = 42/58 (72.41%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of MELO3C013418.jh1 vs. NCBI nr
Match: KAA0054046.1 (epimerase family protein SDR39U1-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 75.9 bits (185), Expect = 3.35e-14 Identity = 42/58 (72.41%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of MELO3C013418.jh1 vs. NCBI nr
Match: TYJ96877.1 (epimerase family protein SDR39U1-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 75.9 bits (185), Expect = 3.37e-14 Identity = 42/58 (72.41%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of MELO3C013418.jh1 vs. NCBI nr
Match: XP_004148540.1 (epimerase family protein SDR39U1 homolog, chloroplastic isoform X2 [Cucumis sativus] >KGN43179.1 hypothetical protein Csa_020200 [Cucumis sativus]) HSP 1 Score: 74.7 bits (182), Expect = 6.43e-14 Identity = 41/58 (70.69%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of MELO3C013418.jh1 vs. NCBI nr
Match: XP_011658559.1 (epimerase family protein SDR39U1 homolog, chloroplastic isoform X1 [Cucumis sativus]) HSP 1 Score: 74.7 bits (182), Expect = 8.65e-14 Identity = 41/58 (70.69%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of MELO3C013418.jh1 vs. ExPASy Swiss-Prot
Match: Q9SJU9 (Epimerase family protein SDR39U1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GC1 PE=2 SV=2) HSP 1 Score: 55.8 bits (133), Expect = 1.8e-07 Identity = 29/57 (50.88%), Postives = 37/57 (64.91%), Query Frame = 0
BLAST of MELO3C013418.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BBD1 (epimerase family protein SDR39U1 homolog, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488077 PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.18e-14 Identity = 42/58 (72.41%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of MELO3C013418.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UID7 (Epimerase family protein SDR39U1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold318G001130 PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.62e-14 Identity = 42/58 (72.41%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of MELO3C013418.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BCM9 (Epimerase family protein SDR39U1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00360 PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.63e-14 Identity = 42/58 (72.41%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of MELO3C013418.jh1 vs. ExPASy TrEMBL
Match: A0A0A0K2D2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G006290 PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 3.11e-14 Identity = 41/58 (70.69%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of MELO3C013418.jh1 vs. ExPASy TrEMBL
Match: A0A6J1EGF9 (epimerase family protein SDR39U1 homolog, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111432329 PE=3 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.07e-12 Identity = 39/58 (67.24%), Postives = 41/58 (70.69%), Query Frame = 0
BLAST of MELO3C013418.jh1 vs. TAIR 10
Match: AT2G21280.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 55.8 bits (133), Expect = 1.3e-08 Identity = 29/57 (50.88%), Postives = 37/57 (64.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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