MELO3C013418 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGGTGAATTATGTAAAGGATTGGGAGCTGAGATGGGAAGACCTTCATGGCTCCCCCAGTACCTGACTTTGCTCTCAAAGCCATACTTGGATAAGGAGCTTCTGTGGTTCGTCACAATCCCACTCCTTACCCTTTCTTTTTCTTTTCTTTTTAAATACAAAATTCTATTTTTCCAAAGTTCGTCATTTTCCATTCTAAATTCATGTCCAATAGGGTTTTGGCAGGGCAAAGGGTGGTTCCTACCAGAGCCAAGGAATTGGGTTTTTCGTATAAGTACCCCTCTGTGAAGGACGCACTCAAGTCCATTCTTTCCTAA GGGTGAATTATGTAAAGGATTGGGAGCTGAGATGGGAAGACCTTCATGGCTCCCCCAGTACCTGACTTTGCTCTCAAAGCCATACTTGGATAAGGAGCTTCTGTGGGTTTTGGCAGGGCAAAGGGTGGTTCCTACCAGAGCCAAGGAATTGGGTTTTTCGTATAAGTACCCCTCTGTGAAGGACGCACTCAAGTCCATTCTTTCCTAA ATGGGAAGACCTTCATGGCTCCCCCAGTACCTGACTTTGCTCTCAAAGCCATACTTGGATAAGGAGCTTCTGTGGGTTTTGGCAGGGCAAAGGGTGGTTCCTACCAGAGCCAAGGAATTGGGTTTTTCGTATAAGTACCCCTCTGTGAAGGACGCACTCAAGTCCATTCTTTCCTAA MGRPSWLPQYLTLLSKPYLDKELLWVLAGQRVVPTRAKELGFSYKYPSVKDALKSILS Homology
BLAST of MELO3C013418 vs. NCBI nr
Match: TYJ96877.1 (epimerase family protein SDR39U1-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 76.3 bits (186), Expect = 1.0e-10 Identity = 42/58 (72.41%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of MELO3C013418 vs. NCBI nr
Match: XP_008444867.1 (PREDICTED: epimerase family protein SDR39U1 homolog, chloroplastic-like [Cucumis melo]) HSP 1 Score: 76.3 bits (186), Expect = 1.0e-10 Identity = 42/58 (72.41%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of MELO3C013418 vs. NCBI nr
Match: KAA0054046.1 (epimerase family protein SDR39U1-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 76.3 bits (186), Expect = 1.0e-10 Identity = 42/58 (72.41%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of MELO3C013418 vs. NCBI nr
Match: XP_011658559.1 (epimerase family protein SDR39U1 homolog, chloroplastic isoform X1 [Cucumis sativus]) HSP 1 Score: 75.1 bits (183), Expect = 2.2e-10 Identity = 41/58 (70.69%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of MELO3C013418 vs. NCBI nr
Match: XP_004148540.1 (epimerase family protein SDR39U1 homolog, chloroplastic isoform X2 [Cucumis sativus] >KGN43179.1 hypothetical protein Csa_020200 [Cucumis sativus]) HSP 1 Score: 75.1 bits (183), Expect = 2.2e-10 Identity = 41/58 (70.69%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of MELO3C013418 vs. ExPASy Swiss-Prot
Match: Q9SJU9 (Epimerase family protein SDR39U1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GC1 PE=2 SV=2) HSP 1 Score: 55.8 bits (133), Expect = 1.8e-07 Identity = 29/57 (50.88%), Postives = 37/57 (64.91%), Query Frame = 0
BLAST of MELO3C013418 vs. ExPASy TrEMBL
Match: A0A5D3BCM9 (Epimerase family protein SDR39U1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00360 PE=3 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.8e-11 Identity = 42/58 (72.41%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of MELO3C013418 vs. ExPASy TrEMBL
Match: A0A5A7UID7 (Epimerase family protein SDR39U1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold318G001130 PE=3 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.8e-11 Identity = 42/58 (72.41%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of MELO3C013418 vs. ExPASy TrEMBL
Match: A0A1S3BBD1 (epimerase family protein SDR39U1 homolog, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488077 PE=3 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.8e-11 Identity = 42/58 (72.41%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of MELO3C013418 vs. ExPASy TrEMBL
Match: A0A0A0K2D2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G006290 PE=3 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.1e-10 Identity = 41/58 (70.69%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of MELO3C013418 vs. ExPASy TrEMBL
Match: A0A6J1I7C1 (epimerase family protein SDR39U1 homolog, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111469802 PE=3 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.0e-09 Identity = 39/58 (67.24%), Postives = 41/58 (70.69%), Query Frame = 0
BLAST of MELO3C013418 vs. TAIR 10
Match: AT2G21280.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 55.8 bits (133), Expect = 1.3e-08 Identity = 29/57 (50.88%), Postives = 37/57 (64.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
|