MELO3C013417 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCGGACGCTCATCATCGAAACCAATCAAAACTCTCTCCCCTTCGTTCTTCCTACCACCGTCGATCGTTTCATCGGCGACTCATCGCTCCGTTCATCTCATCTCTGGTACGTTTGCATTCGCATTCTGGCTTGTGGTTTTTTTATTCGAATTCTATCTTGGTTGATCCTCTTGAGATGTTACTCTGATTGTTTTGCTTGCTCACTAAGCTGACTGACCTGAACTTTGAATTGTCATTATCTTTCCATTCTTCTCGTCTGGATATGTGCATTCATTTGTTAGTTAACTTTTTTACTGTTCCGTTGATCGGAAGATGTTGGTTACCTGCGGCCAATGAAAGATAAACGTAGCAACTTGATTGATTGATTATCTTTGGTGTGAGTTCTGATTTTTCTTCTTCTTCATATTCTTATTGTTTGCCTTGTTTTATGTATTTCGGTCTAGCTGTTATTTCATGTTTGATATAAGGGGAGTGAGGATTTGCTATCTATTTATGTACTTTTTTCTGTTCTTTTGGTGATGAATCAGTTTGATGCGCTTAGTGTCCTTTAGTCACTACGCTGTATAAATGAAATAGTGCATTAGCGATTTATTGCTTGAATTTAAGGTTTAAGATTATGATGCCGTAGCTTTCAAGCATTTGGTTTTCTTACATATTGTACAGCATGCAGTTCCTCACCACTCGGTGGAGCCTTTAAGAGGTTGATAATCCGTTGAGGCACTCTATACACGCTGTACAAAATGGTATGAATTCTTTTCTCAGCTTGTTCTAATGAGAACCTTTGATGTTTTTGAGAAACTGCATTCGATTCTTGCATTGTCCGTGTGATGAGAAAATGAAGAAAAGGCATGTAGTATGTGTTTTAGACGTGACGTGGAGTTGAATTGATTTATCTTACAGAAGGTTCTACTGTCCCTCAATTTAATAAATTACTGATTTCTTATTTTTTTGTCAGTTACATTACTGCTCTTTTGTTAATCCTTGACCTTAAGATCTTGTGCTTCTTCTGGCTATGGAACACGAAACCTGCTGAACAAATATTTGCAGAGGATTTATTCTGTGTTGCATATTTACTTCTCCCGCCTAAAACCTTTTAATTAATACCTTATATAATATGTGAGCGATGGGGGAACATCTTTTTTAAAAAAGAAAAATAAAGAATATATTTTCTTTTTGTACATCTCACTTGGTCAAAGCAGTTCGTCACTTATATGATAAACTAAATTTGAGAACGTAATGTTTTGGATGTTCCCAATCAATTCAAACCTTGGGAGAGGATTTTACTTTTGTTGTAGATTCGTCTGGTCATGTACAAGTTGTTACTGTTTTTTCAATACATAGGCCTCCAATTCCTCGATTTAGGAGGGTTCTTAATGTGAAAAGTTATGTACATTCTTCTGAAAAGAAATTGGTTAGTTTTTGTAGTTATTACAATTCACGATATCTCTATGTTTCTGCATCTGCAGTATTTTGATGGGTATGGATATCGTGGAACATCATTTGAGCAAAGTTATCAATGTTTCTCTACGTCGTTTATTGATAAGGTTTGATTTCCTTCTATATTTATTTGTTGTTTGAAGTGTGCTCAAATGTTGATTAGCGTTTGGTGTGTTTCTTGTTTTATTTTGCATGCATAACAAAGGCCTTCTTCATGCTAGATAATTAAATGTAGGCGGCCTTGTGATACTTGTCTTTGTTTGAAGTTTCAGCTTGGATCAACATTGCTCTTGCATTATTATTTGTCATTTTCTTTTTGTGTGTGCGCTCTTGGAATTTCATGTAATATCAAGCAACTGCTGTGCATGTCTCTAATTTGTACGCAAAAGGAAATATATATTGGAATGTTGCTCTTTGTTATAGAGAACTTTAAAGCATCCGTGTTTGCACACATAAAATCTAATTGTTTTCTTATTCCCAAAATAGTTATTTCTTCTAATCCCAGTAAATTTTTTCATACTGCAGCCACACCTTGAAACTGGAGATAGAAGTAAGACGTTCAGTCTTCACCTTTTTTATGTTTGAGGTTTCTGTTCCTTTTTTAACGTATTTTACAACTTCATATTCATAGTTTCTCATGTTGTTTATTTTAATTTTGATTTTCAGTTATAATGCCTCCATCAGCCCTTGATCGCCTAGGTTTGTTGGCATACTCGTAAAAGTCATTTTTGTTCTCCTAGTTTTTCCTCTGTTCTTTTCATCATGGGTGACTGATTTAAACTTAACACCCTGCAGCCTCATTACAAATTGATTATCCAATGTTATTTGAGCTACGAAATGATGCTGTTGAGCGAGTCTCTCATTGTGGGGTTTTGGAGTTTGTTGCAGAAGAAGGCATGATTTACATGCCTTATTGGGTAGATTTCCATATTTCTCTTGTGCGATACATGTCCCAGGTGTTCGTAGCTCTGTTTTATGTTTTGTACTAGAACACTTCGGTTTAAATTGTTCTTTCAGATGATGGAGAACATGCTTTTACAAGAAGGAGACCTAGTGCGAGTGAAAAATGTCCCCCTTCCAAAGGGAACCTATGTTAAATTACAACCTCACACAAAGGACTTTTTGGATATCTCAAATCCCAAAGCAATGTAAGATATTCTTTTACTTTCTCCACTTATTTGTATTTACAGCTTAGGTCACAGGAAGGAGTTCTAAATTTGAAATCCTGGACCGTTTTCTTATTTAATTTGAAGACGAGCTCTTTAGCCAAGGTTAATTTAGCCGCTACCACCTATAGGCGTAAAAGGTACATAAAATGCTCGAAAGTCAAATTGCTACCATGTATTGGTGTTGACCTAATGGTAAAAATAGGCTGCTCTAATCCAATGTCTTTGAAGTTATGGATTCAAAGCTCTGTAGTTACTTGATATATTTAGTATTATGGGAAGCTTTTAGATATATATACATAGCCTGCATGGAAGAACTTTTGGATCTTACGAAAGCCAAGAGACAGAGTATGAACAAAATAAAAAAGAAGAGGAAACAAAAGAAAATTTTTTTCTTTTACATATCTATATACATCCCAGCATTTGTTGCTTGATGAAAGTTATATTGAAAAAAAATTATGGTCAATATCTAATTGGTGTTTTCAAATTGTACATGCTTGACTTCATAAGTGATAAGATAAATTTGGAGGCTGATTTTGTTATTAAAGAAATGGAGAAGTATTTCTGTGCATGGTAGTTAAGGAAGTGTTAAATGTTAGAACATTGCTCTCAAACACATGCTATGGTATTTTCTTTCTGGGTGATATGCCCTTGTCATAAATCACGTGGTTGGTGTGATGAAGTTTGTTTCACATGTCAGAGTATTTATCTTTGTCATACAGCTTAGAGACAACACTTAGGAATTTCTCCTGCCTCACCACTGGAGACAGTATTATGGTGGCCTATAACAACAAGAAATATTACATTGACATAGTCGAAACGAAGCCATCCAATGCAATAAGTATCATTGAGACAGATTGTGAGGTTGATTTTGCACCTCCCCTGGATTACAAAGAACCGGAGAAGCCTGTTGCACCAACAAAAGGGAAGGAACAAGGTGTTATTTTCTACTCCTTTTTGCTCAATTCTTACTGCAATTTGCTGATGTTGTTCGTTTGCTGGTGTGTGTAAATCAGTTAAATATAATGCTTGATTTTGTTTTATTTATGCATATGAAGTTAATTTTTTTTCTTAATCAGCTTTGTGACCTGATTCTATAGAGAGTTTCTAGTTATCTAATGTCATAGGATTTAGCAATCTTGAGCCAAAGAGAATCAGAAGGCCACCGTTTACTAGTTCTAGGTACTAATGAATGTGGAAGAGATGCACTTAGAAGCTGGGTGTGGGTAATCTTTCATATTCTAAATGAACTCTCTTGCAGTTGCAGAAGCTCCAGATGCCGAAGCTGAACCCAAATTTAGTGCATTCACAGGAACAGGAAGACGTTTGGATGGTAAATCTTCAAATCACCAGCCTCAGCCAATTTCATCTTCTAGGTCAGGTGATGCGAAGCAATTGGGTGGTAGAAGTAGATATGGCCATTCTCAACAGTCTGCTGGATCTAGCTCTGTGAACGGAGCTCATCAGTCTCAGGGAAAGTTAGTATTTGGACAAAATGCCAATCGGAATCCTAAAGAGACTCCAAAGGTACACTCACTCTGCTCATAATCATCATCTTATTTGAAATTTTAAATTTGTGTTCAATATATACTTTATCTTTAAAAAATCTAGTTGGTTATTTTCAATTTTGTGTCTTACGGGACTTTGACATCTCTTATATTTTAAGTCTAATAGAATCTAATATAGTCCCATGCCTTCCCAATTTTGTGTTTGGTTAAATCTGTGAATTTTAAATTAGTTAGACATAAATTTTAAAATTTATAATTTAAGAACTAAACAACCTATTTTTTGGTAGATCATAGGTTAGATTTTCTTGTTGCAAATTGGACCCATATTTTGTATTCCTTATCATAAGGATCTCTGTACATTCTTTGGATATTTCATACATGAATGTTTTTTTTTAATCAAAAAAGAGAGGTAGAAAGAACTCATCATAGTTGGAAGGCATTAATACTTTCTAGACTTTAACAGCGTTTAAATTAAATTGACGAGAATTGATACAAGTTTGTCGTTTGGTAAACACTGATAGATTTCTATCAACATAGGTAAGAAAATTCTGTAAATTTGATTCATTTTTCTATATTTTAAAAACCCCATTTATTTATTTATTGTTTCAAAAAGAAGTAAGGGAGTCTGTTATGACATTTTATAGGAGACTTCAAAAGAGAGTAAAAAAGATGAGGCTGAAAAGGAAGATCCCAAATTCCAACCTTTTACTGGGAAAAGGTACTCATTGAGAGGTTGATTGTTTATCTAACATTTACTTCAGTGGATATATATAGGAACCCTTCATTGTCTACATCTCTTCATAGAACGAACTCAGTGTAGTTGAAGTCATGCCATGCCTTACACCTCGCTTTGTGTCCATAAATTTATAAATCATGAGCAATTATTTGTTCTCCTTCTCCAC ATCGGACGCTCATCATCGAAACCAATCAAAACTCTCTCCCCTTCGTTCTTCCTACCACCGTCGATCGTTTCATCGGCGACTCATCGCTCCGTTCATCTCATCTCTGCATGCAGTTCCTCACCACTCGGTGGAGCCTTTAAGAGGTTGATAATCCGTTGAGGCACTCTATACACGCTGTACAAAATGTATTTTGATGGGTATGGATATCGTGGAACATCATTTGAGCAAAGTTATCAATGTTTCTCTACGTCGTTTATTGATAAGCCACACCTTGAAACTGGAGATAGAAGTAAGACGTTCAGTCTTCACCTTTTTTATGTTTGAGGTTTCTGTTCCTTTTTTAACGTATTTTACAACTTCATATTCATAGTTTCTCATGTTGTTTATTTTAATTTTGATTTTCAGTTATAATGCCTCCATCAGCCCTTGATCGCCTAGGTTTGTTGGCATACTCGTAAAAGTCATTTTTGTTCTCCTAGTTTTTCCTCTGTTCTTTTCATCATGGGTGACTGATTTAAACTTAACACCCTGCAGCCTCATTACAAATTGATTATCCAATGTTATTTGAGCTACGAAATGATGCTGTTGAGCGAGTCTCTCATTGTGGGGTTTTGGAGTTTGTTGCAGAAGAAGGCATGATTTACATGCCTTATTGGGTAGATTTCCATATTTCTCTTGTGCGATACATGTCCCAGGTGTTCGTAGCTCTGTTTTATGTTTTGTACTAGAACACTTCGGTTTAAATTGTTCTTTCAGATGATGGAGAACATGCTTTTACAAGAAGGAGACCTAGTGCGAGTGAAAAATGTCCCCCTTCCAAAGGGAACCTATGTTAAATTACAACCTCACACAAAGGACTTTTTGGATATCTCAAATCCCAAAGCAATCTTAGAGACAACACTTAGGAATTTCTCCTGCCTCACCACTGGAGACAGTATTATGGTGGCCTATAACAACAAGAAATATTACATTGACATAGTCGAAACGAAGCCATCCAATGCAATAAGTATCATTGAGACAGATTGTGAGGTTGATTTTGCACCTCCCCTGGATTACAAAGAACCGGAGAAGCCTGTTGCACCAACAAAAGGGAAGGAACAAGTTGCAGAAGCTCCAGATGCCGAAGCTGAACCCAAATTTAGTGCATTCACAGGAACAGGAAGACGTTTGGATGGTAAATCTTCAAATCACCAGCCTCAGCCAATTTCATCTTCTAGGTCAGGTGATGCGAAGCAATTGGGTGGTAGAAGTAGATATGGCCATTCTCAACAGTCTGCTGGATCTAGCTCTGTGAACGGAGCTCATCAGTCTCAGGGAAAGTTAGTATTTGGACAAAATGCCAATCGGAATCCTAAAGAGACTCCAAAGGAGACTTCAAAAGAGAGTAAAAAAGATGAGGCTGAAAAGGAAGATCCCAAATTCCAACCTTTTACTGGGAAAAGGTACTCATTGAGAGGTTGATTGTTTATCTAACATTTACTTCAGTGGATATATATAGGAACCCTTCATTGTCTACATCTCTTCATAGAACGAACTCAGTGTAGTTGAAGTCATGCCATGCCTTACACCTCGCTTTGTGTCCATAAATTTATAAATCATGAGCAATTATTTGTTCTCCTTCTCCAC ATGTTTTGTACTAGAACACTTCGGTTTAAATTGTTCTTTCAGATGATGGAGAACATGCTTTTACAAGAAGGAGACCTAGTGCGAGTGAAAAATGTCCCCCTTCCAAAGGGAACCTATGTTAAATTACAACCTCACACAAAGGACTTTTTGGATATCTCAAATCCCAAAGCAATCTTAGAGACAACACTTAGGAATTTCTCCTGCCTCACCACTGGAGACAGTATTATGGTGGCCTATAACAACAAGAAATATTACATTGACATAGTCGAAACGAAGCCATCCAATGCAATAAGTATCATTGAGACAGATTGTGAGGTTGATTTTGCACCTCCCCTGGATTACAAAGAACCGGAGAAGCCTGTTGCACCAACAAAAGGGAAGGAACAAGTTGCAGAAGCTCCAGATGCCGAAGCTGAACCCAAATTTAGTGCATTCACAGGAACAGGAAGACGTTTGGATGGTAAATCTTCAAATCACCAGCCTCAGCCAATTTCATCTTCTAGGTCAGGTGATGCGAAGCAATTGGGTGGTAGAAGTAGATATGGCCATTCTCAACAGTCTGCTGGATCTAGCTCTGTGAACGGAGCTCATCAGTCTCAGGGAAAGTTAGTATTTGGACAAAATGCCAATCGGAATCCTAAAGAGACTCCAAAGGAGACTTCAAAAGAGAGTAAAAAAGATGAGGCTGAAAAGGAAGATCCCAAATTCCAACCTTTTACTGGGAAAAGGTACTCATTGAGAGGTTGA MFCTRTLRFKLFFQMMENMLLQEGDLVRVKNVPLPKGTYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAPTKGKEQVAEAPDAEAEPKFSAFTGTGRRLDGKSSNHQPQPISSSRSGDAKQLGGRSRYGHSQQSAGSSSVNGAHQSQGKLVFGQNANRNPKETPKETSKESKKDEAEKEDPKFQPFTGKRYSLRG Homology
BLAST of MELO3C013417 vs. NCBI nr
Match: TYK06533.1 (ubiquitin fusion degradation protein 1-like protein isoform X3 [Cucumis melo var. makuwa]) HSP 1 Score: 454.9 bits (1169), Expect = 4.4e-124 Identity = 234/236 (99.15%), Postives = 235/236 (99.58%), Query Frame = 0
BLAST of MELO3C013417 vs. NCBI nr
Match: XP_008448043.1 (PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X6 [Cucumis melo]) HSP 1 Score: 454.9 bits (1169), Expect = 4.4e-124 Identity = 234/236 (99.15%), Postives = 235/236 (99.58%), Query Frame = 0
BLAST of MELO3C013417 vs. NCBI nr
Match: XP_016900499.1 (PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X1 [Cucumis melo]) HSP 1 Score: 454.9 bits (1169), Expect = 4.4e-124 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
BLAST of MELO3C013417 vs. NCBI nr
Match: XP_008448046.1 (PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X3 [Cucumis melo]) HSP 1 Score: 454.9 bits (1169), Expect = 4.4e-124 Identity = 234/236 (99.15%), Postives = 235/236 (99.58%), Query Frame = 0
BLAST of MELO3C013417 vs. NCBI nr
Match: XP_016900502.1 (PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X5 [Cucumis melo] >XP_016900503.1 PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X5 [Cucumis melo] >XP_016900504.1 PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X5 [Cucumis melo]) HSP 1 Score: 454.9 bits (1169), Expect = 4.4e-124 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
BLAST of MELO3C013417 vs. ExPASy Swiss-Prot
Match: P70362 (Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Mus musculus OX=10090 GN=Ufd1 PE=1 SV=2) HSP 1 Score: 157.1 bits (396), Expect = 2.5e-37 Identity = 84/160 (52.50%), Postives = 107/160 (66.88%), Query Frame = 0
BLAST of MELO3C013417 vs. ExPASy Swiss-Prot
Match: Q55BK0 (Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.0e-35 Identity = 98/261 (37.55%), Postives = 134/261 (51.34%), Query Frame = 0
BLAST of MELO3C013417 vs. ExPASy Swiss-Prot
Match: Q9ES53 (Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Rattus norvegicus OX=10116 GN=Ufd1 PE=1 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 2.3e-35 Identity = 97/233 (41.63%), Postives = 129/233 (55.36%), Query Frame = 0
BLAST of MELO3C013417 vs. ExPASy Swiss-Prot
Match: Q92890 (Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Homo sapiens OX=9606 GN=UFD1 PE=1 SV=3) HSP 1 Score: 148.7 bits (374), Expect = 8.9e-35 Identity = 97/233 (41.63%), Postives = 131/233 (56.22%), Query Frame = 0
BLAST of MELO3C013417 vs. ExPASy Swiss-Prot
Match: Q9VTF9 (Ubiquitin fusion degradation protein 1 homolog OS=Drosophila melanogaster OX=7227 GN=Ufd1-like PE=2 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 2.4e-32 Identity = 72/149 (48.32%), Postives = 98/149 (65.77%), Query Frame = 0
BLAST of MELO3C013417 vs. ExPASy TrEMBL
Match: A0A1S4DWZ4 (ubiquitin fusion degradation protein 1 homolog isoform X5 OS=Cucumis melo OX=3656 GN=LOC103490342 PE=3 SV=1) HSP 1 Score: 454.9 bits (1169), Expect = 2.1e-124 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
BLAST of MELO3C013417 vs. ExPASy TrEMBL
Match: A0A5D3C3N7 (Ubiquitin fusion degradation protein 1-like protein isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2249G00050 PE=3 SV=1) HSP 1 Score: 454.9 bits (1169), Expect = 2.1e-124 Identity = 234/236 (99.15%), Postives = 235/236 (99.58%), Query Frame = 0
BLAST of MELO3C013417 vs. ExPASy TrEMBL
Match: A0A1S4DWZ2 (ubiquitin fusion degradation protein 1 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490342 PE=3 SV=1) HSP 1 Score: 454.9 bits (1169), Expect = 2.1e-124 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
BLAST of MELO3C013417 vs. ExPASy TrEMBL
Match: A0A1S3BJQ5 (ubiquitin fusion degradation protein 1 homolog isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490342 PE=3 SV=1) HSP 1 Score: 454.9 bits (1169), Expect = 2.1e-124 Identity = 234/236 (99.15%), Postives = 235/236 (99.58%), Query Frame = 0
BLAST of MELO3C013417 vs. ExPASy TrEMBL
Match: A0A1S3BJE8 (ubiquitin fusion degradation protein 1 homolog isoform X6 OS=Cucumis melo OX=3656 GN=LOC103490342 PE=3 SV=1) HSP 1 Score: 454.9 bits (1169), Expect = 2.1e-124 Identity = 234/236 (99.15%), Postives = 235/236 (99.58%), Query Frame = 0
BLAST of MELO3C013417 vs. TAIR 10
Match: AT2G21270.1 (ubiquitin fusion degradation 1 ) HSP 1 Score: 280.8 bits (717), Expect = 1.1e-75 Identity = 159/241 (65.98%), Postives = 187/241 (77.59%), Query Frame = 0
BLAST of MELO3C013417 vs. TAIR 10
Match: AT2G21270.2 (ubiquitin fusion degradation 1 ) HSP 1 Score: 280.8 bits (717), Expect = 1.1e-75 Identity = 159/241 (65.98%), Postives = 187/241 (77.59%), Query Frame = 0
BLAST of MELO3C013417 vs. TAIR 10
Match: AT2G21270.3 (ubiquitin fusion degradation 1 ) HSP 1 Score: 280.8 bits (717), Expect = 1.1e-75 Identity = 159/241 (65.98%), Postives = 187/241 (77.59%), Query Frame = 0
BLAST of MELO3C013417 vs. TAIR 10
Match: AT4G38930.2 (Ubiquitin fusion degradation UFD1 family protein ) HSP 1 Score: 275.8 bits (704), Expect = 3.4e-74 Identity = 147/239 (61.51%), Postives = 182/239 (76.15%), Query Frame = 0
BLAST of MELO3C013417 vs. TAIR 10
Match: AT4G38930.1 (Ubiquitin fusion degradation UFD1 family protein ) HSP 1 Score: 272.7 bits (696), Expect = 2.9e-73 Identity = 146/237 (61.60%), Postives = 180/237 (75.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|