MELO3C013412 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAAGGACCTCCTCAACAAATCCTTTCCCTATTACGACGAGCTTGCATATGTGTTCGAAAAGGATAAGGCCACAGGTCGCTTTGCAGAGACGTTCGTTGATGTCGAGTCTAATGAGCCTGTCGGGTATGAGGGGTTTGACATGCCGGATGGAAACGATATGGAGTTTCCATCCATGTACAGCCAGGGGATTGACATGTCTCAAGATGATGTACGCACATCACGACCTGCTCGCACGTTAGACGGTAGGCCCAGATCGAGCGGATCCAAGTGA ATGGCGAAGGACCTCCTCAACAAATCCTTTCCCTATTACGACGAGCTTGCATATGTGTTCGAAAAGGATAAGGCCACAGGTCGCTTTGCAGAGACGTTCGTTGATGTCGAGTCTAATGAGCCTGTCGGCCAGGGGATTGACATGTCTCAAGATGATGTACGCACATCACGACCTGCTCGCACGTTAGACGGTAGGCCCAGATCGAGCGGATCCAAGTGA ATGGCGAAGGACCTCCTCAACAAATCCTTTCCCTATTACGACGAGCTTGCATATGTGTTCGAAAAGGATAAGGCCACAGGTCGCTTTGCAGAGACGTTCGTTGATGTCGAGTCTAATGAGCCTGTCGGCCAGGGGATTGACATGTCTCAAGATGATGTACGCACATCACGACCTGCTCGCACGTTAGACGGTAGGCCCAGATCGAGCGGATCCAAGTGA MAKDLLNKSFPYYDELAYVFEKDKATGRFAETFVDVESNEPVGQGIDMSQDDVRTSRPARTLDGRPRSSGSK Homology
BLAST of MELO3C013412 vs. NCBI nr
Match: KAA0049673.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 113.2 bits (282), Expect = 9.2e-22 Identity = 61/80 (76.25%), Postives = 61/80 (76.25%), Query Frame = 0
BLAST of MELO3C013412 vs. NCBI nr
Match: KAA0025858.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 100.1 bits (248), Expect = 8.0e-18 Identity = 55/90 (61.11%), Postives = 60/90 (66.67%), Query Frame = 0
BLAST of MELO3C013412 vs. NCBI nr
Match: KAA0035563.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 100.1 bits (248), Expect = 8.0e-18 Identity = 55/90 (61.11%), Postives = 60/90 (66.67%), Query Frame = 0
BLAST of MELO3C013412 vs. NCBI nr
Match: TYK30971.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 100.1 bits (248), Expect = 8.0e-18 Identity = 55/90 (61.11%), Postives = 60/90 (66.67%), Query Frame = 0
BLAST of MELO3C013412 vs. NCBI nr
Match: KAA0067987.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 99.4 bits (246), Expect = 1.4e-17 Identity = 54/90 (60.00%), Postives = 60/90 (66.67%), Query Frame = 0
BLAST of MELO3C013412 vs. ExPASy TrEMBL
Match: A0A5A7U1E5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00080 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 4.4e-22 Identity = 61/80 (76.25%), Postives = 61/80 (76.25%), Query Frame = 0
BLAST of MELO3C013412 vs. ExPASy TrEMBL
Match: A0A5D3E5U2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001980 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 3.9e-18 Identity = 55/90 (61.11%), Postives = 60/90 (66.67%), Query Frame = 0
BLAST of MELO3C013412 vs. ExPASy TrEMBL
Match: A0A5A7SYB2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G002330 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 3.9e-18 Identity = 55/90 (61.11%), Postives = 60/90 (66.67%), Query Frame = 0
BLAST of MELO3C013412 vs. ExPASy TrEMBL
Match: A0A5A7SI64 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G001320 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 3.9e-18 Identity = 55/90 (61.11%), Postives = 60/90 (66.67%), Query Frame = 0
BLAST of MELO3C013412 vs. ExPASy TrEMBL
Match: A0A5D3E2S0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold575G00440 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 6.6e-18 Identity = 53/88 (60.23%), Postives = 61/88 (69.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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