MELO3C013404 (gene) Melon (DHL92) v4

Overview
NameMELO3C013404
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionATP synthase subunit e, mitochondrial
Locationchr01: 16511335 .. 16513600 (-)
RNA-Seq ExpressionMELO3C013404
SyntenyMELO3C013404
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGTGGACCGGAGCCGTCGATGTCATTGGACTAAAAGTGGAGAGAGTGTGAAGCTTCAAATTCCTAGGGCTCCTCTCTTCTTCAAATCGGCTTCTACTTCTAACATAATTTTCATTCTTTCTTCTTCTCTATTTTCCTTTGCAAAATCCTTTGATGGCACTTCCTCCAGGCCCCTATTCTGGAACTAGCACCCTCGCTTTGGTATGTTTTTCTTTATTTCCCATCCTTTTCATGCAATTTGCGGTCTATACATTTCATTTTCAAATTGCTATTCGTGGATCCGACTTTGGATTCAATACTCGAAATTAATGTTCATATTCAACCTTCTTTTTTATCCTTCACAGGTTGCTCGTGCTTCGGCGTTCTCTGTTGGGCTTGTCTACGGAAGCCTCAAGCTCAAGTACCTTCAGGTTTGTTCATCTGGGATCTATTTCTGCTTGCTTGTTTTTGTCGACTATCTTGGATTTGTTTCGATTACAGATGTAGATGCAGGATATATTTTTAGGGCTATTTGTAATTTTCAATTTGAATGTCCCTGTGCTTTGAGATTAGTTTCAAGTGTATTCTTGAAGAGTTTTTATTACTACCCTTAAGCCTTGAAGCCCTTAAATTGATTCAAGTATGCCCATTGACAATTTTACCGTTAAAAAGAGTTATGAAAATTGATGTGGTCTTGCTGCTTAGTTGTTAGTGTAAATTCGCAGACATGGCTTTTATAAAAACGAAGGTCCACAATGTAGTTTGAACAAATGACGGTCTTGATTAAATTTATCATTTTGAAATTTATATTTTGAACATTTTTTCCTTGAAGCACAATTCGTCTATTTATGTTTACATAATAGTTGATAATTATATTAAAATAGATTATTTGGTCTAAATGTCTAATGCCATGAAAGGATCAATTGTTTTTAATGGGCTGTCAAATTTCTTTGAACATGGAATGAAATTATTTTCAAAGTTAGAACATAGAGTTTGGTTTCTGAACCATGGTAAATATGCTTGGTCTTGGACTTTATTTGTGAAGTTCCATTAATATACTCGATGAAGACCAATGGTTTAGTCTCCTATTTCTAGTTTCATTCCTTTTCAATTTCAGTTTGACTTATAGGAATTGTGATCTTAGAATCTCATGTCACTTCTAGCTGCTATTTGAGGCCATTGTAAATGCACCTGTCTGATTTTAGAATTTTATTTCCATTACTATTTTATCACCACAGGCGAAGGCAAAATCTCACAAGAAAGCTGAAGCAAAGGCTCATCACTGAGGTATGGCTAATTTCGGTCCGTGTCAAAAACGAGGCACTGGTTGAATTTCGAAGGGAAATAATACATCGTAGTTGGTCAAAATCTATTTTTCTTTGATACTTTTTTTTCCATGTTGCATTGGATGGCTTTATATTTCATTAAAGAGTCATATAGATGTATCTTACATCGGTCTTAAGGACTATATTTGAGCTACAATTAGTTTTGATGGATTGATGAGAGGACAAACAGATCACGATTCCTTTCTTTGATTGGAAATGAATAATTTGCTTGTCATCTGTCTTGGTGCAGGTGTTGAGTTAATTCATTAAGGTTTATTCATCTTTATGTTATTTTTTCTCTAATAAACATACTCTACTTGGAATTTGAAATATGATGGGGTTTATTTACTTATTACTATTTTTCTATTATAAGATAAGAAAATGAGTTTAAAAAAAGAAGGGAACTTTTAACGGCCATCGTGTTGAGGGTCTAGTGGTACTGGGATGCGCCAAAAAACAAAGAGAACAGCATAATAGGCTCAAGGTTCAAATATTTTTGGCCACTTAGTTTGTGATACTAAGATTCTATTATTTCTATTTTCTTGTAATTAAATCTTGTAGGAAGAGGTGGTTGACCAAGGGGTTAGTCGGGATCAAGGTGTTAAACTTTTGTTGGCATGTCGATACAATAATCAACATTTCAAACTTTGCTTTCGTTCCAGGTTAATTTTTGGTACTGGTACAAAATGGTATATCTTTAGTTTGAGTAATAGTATTTGAAAGTTTGAATTTATGTTACTGTAGCATAGCTTCCAGACCAAGCATGGTTGTCTTGAATCAGCTCGTCAGCTTTATCGTTTTCTCCATCCAAACATCTTTTTACCATGTCTTAACTGAAATGCTTTTATTCATCATGTGACTTTATTATTATTTTTCTTAAATACATTTTTTTTTATTCACTTTCACTCCTTTGAGGAGGAGCATGTTGCTTGGAGCATTAGTTTCTTTTCATTATATCAAT

mRNA sequence

AAAGTGGACCGGAGCCGTCGATGTCATTGGACTAAAAGTGGAGAGAGTGTGAAGCTTCAAATTCCTAGGGCTCCTCTCTTCTTCAAATCGGCTTCTACTTCTAACATAATTTTCATTCTTTCTTCTTCTCTATTTTCCTTTGCAAAATCCTTTGATGGCACTTCCTCCAGGCCCCTATTCTGGAACTAGCACCCTCGCTTTGGTTGCTCGTGCTTCGGCGTTCTCTGTTGGGCTTGTCTACGGAAGCCTCAAGCTCAAGTACCTTCAGGCGAAGGCAAAATCTCACAAGAAAGCTGAAGCAAAGGCTCATCACTGAGGTATGGCTAATTTCGGTCCGTGTCAAAAACGAGGCACTGGTTGAATTTCGAAGGGAAATAATACATCGTAGTTGGTCAAAATCTATTTTTCTTTGATACTTTTTTTTCCATGTTGCATTGGATGGCTTTATATTTCATTAAAGAGTCATATAGATGTATCTTACATCGGTCTTAAGGACTATATTTGAGCTACAATTAGTTTTGATGGATTGATGAGAGGACAAACAGATCACGATTCCTTTCTTTGATTGGAAATGAATAATTTGCTTGTCATCTGTCTTGGTGCAGGTGTTGAGTTAATTCATTAAGGTTTATTCATCTTTATGTTATTTTTTCTCTAATAAACATACTCTACTTGGAATTTGAAATATGATGGGGTTTATTTACTTATTACTATTTTTCTATTATAAGATAAGAAAATGAGTTTAAAAAAAGAAGGGAACTTTTAACGGCCATCGTGTTGAGGGTCTAGTGGTACTGGGATGCGCCAAAAAACAAAGAGAACAGCATAATAGGCTCAAGGTTCAAATATTTTTGGCCACTTAGTTTGTGATACTAAGATTCTATTATTTCTATTTTCTTGTAATTAAATCTTGTAGGAAGAGGTGGTTGACCAAGGGGTTAGTCGGGATCAAGGTGTTAAACTTTTGTTGGCATGTCGATACAATAATCAACATTTCAAACTTTGCTTTCGTTCCAGGTTAATTTTTGGTACTGGTACAAAATGGTATATCTTTAGTTTGAGTAATAGTATTTGAAAGTTTGAATTTATGTTACTGTAGCATAGCTTCCAGACCAAGCATGGTTGTCTTGAATCAGCTCGTCAGCTTTATCGTTTTCTCCATCCAAACATCTTTTTACCATGTCTTAACTGAAATGCTTTTATTCATCATGTGACTTTATTATTATTTTTCTTAAATACATTTTTTTTTATTCACTTTCACTCCTTTGAGGAGGAGCATGTTGCTTGGAGCATTAGTTTCTTTTCATTATATCAAT

Coding sequence (CDS)

ATGGCACTTCCTCCAGGCCCCTATTCTGGAACTAGCACCCTCGCTTTGGTTGCTCGTGCTTCGGCGTTCTCTGTTGGGCTTGTCTACGGAAGCCTCAAGCTCAAGTACCTTCAGGCGAAGGCAAAATCTCACAAGAAAGCTGAAGCAAAGGCTCATCACTGA

Protein sequence

MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH
Homology
BLAST of MELO3C013404 vs. NCBI nr
Match: XP_038887516.1 (uncharacterized protein LOC120077638 [Benincasa hispida] >KGN43194.1 hypothetical protein Csa_020535 [Cucumis sativus])

HSP 1 Score: 100.5 bits (249), Expect = 4.5e-18
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH
Sbjct: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

BLAST of MELO3C013404 vs. NCBI nr
Match: KAG7022252.1 (hypothetical protein SDJN02_15983 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 99.0 bits (245), Expect = 1.3e-17
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MALPPGPYSG+STLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH
Sbjct: 1  MALPPGPYSGSSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

BLAST of MELO3C013404 vs. NCBI nr
Match: XP_022952755.1 (uncharacterized protein LOC111455357 [Cucurbita moschata])

HSP 1 Score: 99.0 bits (245), Expect = 1.3e-17
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          M LPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH
Sbjct: 1  MTLPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

BLAST of MELO3C013404 vs. NCBI nr
Match: KAF4388402.1 (hypothetical protein G4B88_013239 [Cannabis sativa])

HSP 1 Score: 97.4 bits (241), Expect = 3.8e-17
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS+GLVYGSLKLKYLQAKAKSHKKAEAKAHH
Sbjct: 42 MAPPPGPYSGTSTLALVARASAFSIGLVYGSLKLKYLQAKAKSHKKAEAKAHH 94

BLAST of MELO3C013404 vs. NCBI nr
Match: XP_030478880.1 (uncharacterized protein LOC115695925 [Cannabis sativa])

HSP 1 Score: 97.4 bits (241), Expect = 3.8e-17
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS+GLVYGSLKLKYLQAKAKSHKKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSIGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

BLAST of MELO3C013404 vs. ExPASy TrEMBL
Match: A0A0A0K2E7 (ATP synthase subunit e, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_7G007920 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.2e-18
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH
Sbjct: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

BLAST of MELO3C013404 vs. ExPASy TrEMBL
Match: A0A6J1GMM8 (ATP synthase subunit e, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111455357 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.4e-18
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          M LPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH
Sbjct: 1  MTLPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

BLAST of MELO3C013404 vs. ExPASy TrEMBL
Match: A0A7J6FXI7 (ATP synthase subunit e, mitochondrial OS=Cannabis sativa OX=3483 GN=F8388_024057 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.9e-17
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS+GLVYGSLKLKYLQAKAKSHKKAEAKAHH
Sbjct: 42 MAPPPGPYSGTSTLALVARASAFSIGLVYGSLKLKYLQAKAKSHKKAEAKAHH 94

BLAST of MELO3C013404 vs. ExPASy TrEMBL
Match: A0A7J6GZJ8 (ATP synthase subunit e, mitochondrial OS=Cannabis sativa OX=3483 GN=G4B88_013239 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.9e-17
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS+GLVYGSLKLKYLQAKAKSHKKAEAKAHH
Sbjct: 42 MAPPPGPYSGTSTLALVARASAFSIGLVYGSLKLKYLQAKAKSHKKAEAKAHH 94

BLAST of MELO3C013404 vs. ExPASy TrEMBL
Match: A0A6J1C358 (ATP synthase subunit e, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111008022 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.4e-17
Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MALPPGPYSGTSTLALVARASAFS GLVYGS KLKYLQAKAKSHKKAEAKAHH
Sbjct: 1  MALPPGPYSGTSTLALVARASAFSFGLVYGSFKLKYLQAKAKSHKKAEAKAHH 53

BLAST of MELO3C013404 vs. TAIR 10
Match: AT3G01130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 1.6e-13
Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPG YSGTSTLALVARASAF +GL+YG++KLK L+ K  S  KAEAKAHH
Sbjct: 1  MAPPPGLYSGTSTLALVARASAFGLGLIYGNIKLKALKIKKNSQIKAEAKAHH 53

BLAST of MELO3C013404 vs. TAIR 10
Match: AT5G15320.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 1.6e-13
Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          M LPPG YSGTS+LALVARASAF +GLVYG++KLK L+ K+ S KK EA AHH
Sbjct: 1  MTLPPGLYSGTSSLALVARASAFGLGLVYGNMKLKVLKIKSMSQKKVEATAHH 53

BLAST of MELO3C013404 vs. TAIR 10
Match: AT5G15320.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 1.5e-11
Identity = 37/53 (69.81%), Postives = 42/53 (79.25%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          M LPPG YSGTS+LALVARASAF +GLVYG++KLK    K+ S KK EA AHH
Sbjct: 1  MTLPPGLYSGTSSLALVARASAFGLGLVYGNMKLK---IKSMSQKKVEATAHH 50

BLAST of MELO3C013404 vs. TAIR 10
Match: AT3G01130.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 2.4e-09
Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAK 41
          MA PPG YSGTSTLALVARASAF +GL+YG++KLK L+ K
Sbjct: 1  MAPPPGLYSGTSTLALVARASAFGLGLIYGNIKLKALKHK 40

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038887516.14.5e-18100.00uncharacterized protein LOC120077638 [Benincasa hispida] >KGN43194.1 hypothetica... [more]
KAG7022252.11.3e-1798.11hypothetical protein SDJN02_15983 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022952755.11.3e-1798.11uncharacterized protein LOC111455357 [Cucurbita moschata][more]
KAF4388402.13.8e-1796.23hypothetical protein G4B88_013239 [Cannabis sativa][more]
XP_030478880.13.8e-1796.23uncharacterized protein LOC115695925 [Cannabis sativa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K2E72.2e-18100.00ATP synthase subunit e, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_7G007920... [more]
A0A6J1GMM86.4e-1898.11ATP synthase subunit e, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111455... [more]
A0A7J6FXI71.9e-1796.23ATP synthase subunit e, mitochondrial OS=Cannabis sativa OX=3483 GN=F8388_024057... [more]
A0A7J6GZJ81.9e-1796.23ATP synthase subunit e, mitochondrial OS=Cannabis sativa OX=3483 GN=G4B88_013239... [more]
A0A6J1C3582.4e-1796.23ATP synthase subunit e, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11100... [more]
Match NameE-valueIdentityDescription
AT3G01130.11.6e-1373.58unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G15320.11.6e-1371.70unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G15320.21.5e-1169.81unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G01130.22.4e-0975.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008386ATP synthase, F0 complex, subunit E, mitochondrialPFAMPF05680ATP-synt_Ecoord: 12..51
e-value: 3.1E-5
score: 24.2
NoneNo IPR availablePANTHERPTHR36028OSJNBB0050O03.8 PROTEINcoord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013404.1MELO3C013404.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function GO:0015078 proton transmembrane transporter activity