MELO3C013338 (gene) Melon (DHL92) v4

Overview


Name	MELO3C013338
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	RNA-binding protein 39
Location	chr01: 15820630 .. 15832090 (+)
RNA-Seq Expression	MELO3C013338
Synteny	MELO3C013338

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAATTCTTCGCCGCAGCGTACCTCAAAAGGAACTGTGACCCAGCAGCGGAAGCACCAGCAACAATCCAGTTTATCATCCTCCTTCTGCGTGTCTTTATCAATCACCTGGAGGCTGCAGCTGGTGAGCATAGCTCAATTTTTTTTTCCGCGCTGTGGAGGTAATTCAACGTTTCTATGAAACTATTCTTCCAGTTAGCGTTCGAGAATGGTAGCTGATTTGTTTGGCATTGCGAACTGAAAGGACTAATTTTCTCTGTTCGTAATTAGGGCTTCAGTTTCAGCGCAGCTTTAGTTTTTGAATTACTGTATTTTATTTTCTCTTCGCTGAGTTTGCGATTAGGATTAGCAAGTTAACTGGAGTTTCTTGTTTAGCTGGAAGATAATTATGTTATGGAGTTGGTTTATGGTTGTGAAGCTCTAGAGAACCAGGATTGTTTATTTGTTTATTATTTTTTGTTGTTGCAGTTTTTTCGCAGTTTAGAGGACACTGTTTAGCTGCTGTATGTTGCATAATTCGCTTTAGAGACGGTAGTTATGGATTTTGACGAGTATGATTATTTGGAGAAAACAGTTGAAAACCCCGAGGGACAAAAAGTGAAGGAAACTGCCAATGGCGGTGATGGAGAAATGAAATCTGGAGATAAGCATTATAGTCGGAGTTTAAAATATAAGAGTGATGGTAAAGATGATGGGGAACATAGGTCAAAGCGTTCGAAATCGGATGATGAGTCACGTGATCGAGACCGGCATAGAGATAGGACTTCTTCCCGTCATCGCTCTAGGTCCAGAGAGAGGGACCGTGATAAGCATCGAAGCTCCAAGGAAAATAGGGGAAAAGATGACAGAGAAGGGAATCGGGAAGAGAGAAGCAGTAAGGACAGGGATGTGGACAGAGATAAAGAACGTTCTCATGATCGTGATAGACGGGGTAGAGATGGTGAAAGGAATAGGGAAAGAGAACGATCACGTCGAAGTAGAAGTCGTTCAGAAAGACATCGCAGTGATCGTGACGATGGCATAAGAGAGAGGAGCCGAGATAATGAACTCAGAGAAAGAGAAAAGGAGAGAGAGTCTAGAGAGCGAGGCAGAGATGGCAGGTATTTTATACATTTATATTATTGTACCATGTATTTTGGTATTAGAAGCAGAGAGAACCAAAAGATTATTTGCGTTGTTCCTATAATTACTTTCACTCTCTAATGTCGAAACGGAAAACTGTTTCACCGAGTAATTTAATTTCATGTTATGTCAATGGATTATTGACATTGTTATGCTGCTTTGATACACTTTTGACCTTGATTTAGATTAGACATGGTGCATGGGCATTCTAAATGATGGTAGATAATGCTGCTTCACGATTGAAAAACAAACACTTGTATGGCGTTGTATGATCATGAATTGATCAGTATGCACTAGTCATTTAACAGTCTAATTGCTTCGAGGAATAAACTTACGGATTTCATTCCTTGGGCGGCTGTAAGGTCTGTCCAATGATCGGACCTCTCCTTCTTGTTTTCCATAGATCATCCATCGTGAATATAGATTTTCATGAGATCCAAAACCATAAAACCAAATAAATGATGCCCTCGTTTTGTATGGTAGGCTAAGGTATAGCCAATGAGAGAACCATGTCACTGGAAGTTTTTGTTGTGGTCTGAGAAAACCTGTCTTCAATGGTCATCGTGATATATGGTCTTCTTAGAACATACTTGGTTATTTTATTGTTAATCATTATCCATTGAAGTGAACCTCAATTGGGTACTGTATGACATCCAGAAGCACATGTCATTCACAAGGTTTTGCCTATTTCTTTCCCGATTAAGTTTTACAATGTCTATAAATGGAACTACCCCCATGATGACATCCTTGGGTAAAATAAAATTGATAGTTGGAAATTCGTCTTCATAGTTTATAAGCGTTTACTGTAACAGTTTTCTGGTTTTCTCGAATTTCTCATAAAGATTAGTAATTAGGAAACCTTAGATGTGCAAGACTGCCTGCTGGTAGCAATTTTAATGGAAGAGGAATTCAATCCATTTCCAGTGTCCCTGCAGAACAACCATGAAGTTTGCTTTGGAGCTTTCTGTGTTTCAGTAATGGAGGTCATATTTAGTGGCGGTGACGTGACTTATTTTCACCATCACCACATTGAAGTCGAAGATTTAATTTTTTATCTATTCTGTTGCAGAAATGCTGGTGAGGGAGTTGTGGGCTTTACTTAAGAGATGAATTCCATCTTCTGATGCTTGTGGGAAATTCAATATTCAGTGGCTACTGGATTCTCATCATACATGAAATTATTTTGTTAATGTTTAATTTAGGTGTTGAAATAATTGTTTTGGAGAGTTTATAGTAATTTGAATGATTTTATTTTGGCAACCATTGCTTGCAATATTGTTTTTTGTACACCTTCAGATGCTCTCATTTCTCTTTTCATTTATTTTTAATAAATTTTAAATTACTAAAGTTTTTTCTAAGTTGAATTTCCAAAAATCTTGCATCTCTTTAACTATTAGTTTTGAGAACATGAACAAGTCATTCTTTATCTCCAATATCAGTTATTGCAATTGAATTTACGCTCCTTCCCTTGAATACTTCAGTTGATGTTTTACATGTAATATTGTACAAATATAAGACTGCAATAATTATTTCTTTCACTTTTTGTGTGGTTAATCCTTTCTCTGGAATATAAACTTTTAACGTGTTCTGTGTTAATGCAATTAGGTTCTTTGCTACTGCATCAATTCAACTTGATGACGCTGTTGTCATTTAAGATTTTATTATTTATGGAAGGTACAAAATCTGTGGTCAATCCATTGTATGACTATTTTGGCCTGATTCTTAACTATGCAATCAAGTACTACCAGTATGTCCCATCCTTGTTTGTTAAATTTGTGGAAAGGGATTTTTCGTATCTCTGGGTTGTTTCTTACCTATTAAAATGCGTAGGGGACTTAATTTTATAAGCTTTTCATAAAAAGTGGAAAAATACATGTTCTGGATTGTTCTACTTTTGCCATGATTTAAGGATGTAACTATCTCATTGTATTATTTATTTATTTATTTCAACGTGTGTTTTCTTCACCCTTTTAAATAGAGTTCTTTCTAGTCCACTTATGGGTGGTCTCTTTCCCATGACTTATTTATGCATCTGAAGGTTGTGTTTATAATTTTGTTAGCTAATAACAAAGGATGTCTCTGACCAATGTTTTTTCTCCATCCCATAGAAGATATAAAGATAAAAAGGACGAAGCAGCTGAACCAGAAGCTGATCCTGAAAGGGATCAGAGGACTGTATTTGCCTATCAGGTAAATCTTCTATTGGGACACGAGATATTCCAATCTTTCTTTTTCATATTGCATATTTTTCTTTTTATGAAAAAATATATTTTCATAAGAACATTCAAATTTCATTTTAATACTTATTGCATATTTTTAATAACGTCTTGTCAACTGACATTTTCTGCATCGCTTGGCCAGATAAGTTTAAAGGCAACTGAAAGAGATGTGTACGAGTTCTTCTCCAGGGCTGGTAAGGTTTGTATGCTCGTCAAATTGTTTCTATCACATTTTCAACTCTTTTAAAGTTCTCTAAGAATAGAATGTTAGTATTGATCAAACCAAGCTGCTTTATTTTATTCCTATTGTCCTATTCTGTGGGAAGTTTAACTGCATTTTTTTCATTGAACTGCTATGTTGCATTGTACAACATACAACTAATCCAGACTATCCATAGAAATTATACATCTTTATCAGTCTTTTTGTCAATGCCAAGCAACATCTTATGTATGGTAAGAAATTGGGTGTCTCTGATAAGTATGCTTTTGTGTATGGAATGTTTTATGATTGGGTGGGGGAAGGCTATGTGACCCTGACAATTCATCCTCTGTATTTCATATTCTCTCTATTTCTGAAGCCTCTCCAACATTTGTGCTAGGTTCTAGATAATCATGAGACCTCTGGGATGCGGGGGAAGGTGGGGTTTTCAACTCCACAGTTAGGGTCTGTCTCTAAATTTACTGAGACCATAGGGACTGGGTTTCGGGATTTGGGTTTCAATGTGATACCATCCCTTGCAGCATGATTCTTTGTGGTATATGATAAGATTATATTGAGTATATTCAGACAACAGACCAATTGTTAGAATTCGTGCTTGGTGGGTATCGGGACTTCTAGGAACTTGGGGAACTCATGATGTTTGTTTTGTTTTTCTGTAGTAATCTACTGGTTGATGAAAGATCTTTCCAATTGGTCTATATGATAGGCTGATGAAAACTTTTGAACAATGTGTTTGGTGCTTGGTTGGTTCAAGCTGTACCCCCTCCTCTCTCTTGAAGATAATTTATTCTTGGAGTCTCTCTCTCTCTCTCTCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCATTTAAAAATTATTTCTAATTTATTCTTAATGAAAATTGAGTTTCTTAGATGCTATAGATGAAAAACATCAGCCTGGAAAATCTCTCTTTCTTTCGTTTATTATTATTATTTTTTTACTCAATACATTGAGCTTTGTAAGTTATATCCATAGCTAAAAAAGTCATCAGCCAGGCAAGTCATAGCTGTCCAATTTTTCTTTTCATTTGATGTTACTAATTTCGTACATGATGTATCTCTCTAATTCATGGGACTCAACTTACAGGTGCGAGATGTACGCCTCATAATGGATCGTAATTCACGGCGTTCTAAAGGCGTTGGGTAAGATTAGTGTGCTTGATGATGTTTACTTGGGTTAATTGGAGTTTGAACATTTTTGATTCACGTCAACCCGTATTTCATATTTTGGTTATTGTCTTGAATCAAATTCCATTGCTTTTTCAAAGTTCAATGAAGGTTTAAGACAAAATGTGATAGAATTTTGAGTCTTCTCCTGAAGAAGAAGAATATATTGCCAAAATAATATAAATTTAAAAGAATGATTTTCTTAAATAGAAAAAACAATCCATTACAAAGAAGGAAAAAATGAATTTGGCTAATATAATACAACCAATACAATAAAATATAATACTAGAAAGGAAATAATCGATATATGTGTGTGTATATATATTTAATAAGACGAGCAAAGAAGTATAAATTTTAGATTCTGTATTATAGACAGAAGAAGGGGGAACAAATCAGCTTACGATTGTAGGTGGAGAAAACCCTGCTTAAACTACAAAAGGAGGGCCTTCCAAAAGTGCAATAATCACAAAAGAAATTTTTGTGGTTTGAGCATTACCAAAAAGTAATGTAATGAACATTATTGCAAAAAGAAAAAAGAAATCCTTCGAGACCCTTTTATTTCCCCCCACCCACTGCCACCCATAAAGGAAAAGAAAAGAAAACCCTGGTTTCTTTTGTTTCATATCAACTGAAAGAGGTAAGGACTGCCCAATTTCACGAACCTTGGCTTTTCCCTTCTAATCCCCCTTTAGAGGAAGGCAAAAATCCATGCTAAATTAAGACAAAGTGCAGTACTAGGCGCTATAGGTGAAAAACACTGGATAAAGGGGCGATCAAGGGTTTCTTCATTCTTACTGGAGTATGATGGCAAATACATTGGATAGGTTGGACCTATTTATAGTGAGAACTCCAAAAAAGAAACAGTAGGGTTTCTGTATCAGTGTGGCGGAAGGGAAAGGTTTGGGGGCATGGAACTTAATTTGATAGGTAATTTATGGGAAAGGCTCATTTTGGGTGAGGTGAAAACTTCTGATAGTTTTCTACAAAGGTAATGAGGTGACTTGTGAGGGGACTAAGGGCTTGAGGAATAAGGGAATCAGTAACTTGAATCCGGTTGTGCTCATTCTCCGAGAGATGAAGTTTGAACTTGGAAGTACTAGATAAAATGGATGGTAATGTCTCATGGAATTTAAACTATAGGTTGAATGGAGATTTATCAAGTCTTGTAGTTGTTCGCAAGGAATTTAATTGTGTGGGGATAAAAATATGATTTTGTTTCTTTAATGTTATGAGAGGACATCAAAATTTTCAATTGAGTGATTGGGGCATCCTTGATTCCTTATTAAATGGCTCGTTGGGGTTATTGGTTAGAGTTTCAAGAATAAATGGTTTTTTTTACCATGTTATAAGGAGCATTGGAACATACAAAGGCCTTTTCTGTGTGGATATTGGATAGTAAGATGTTACTGTTTAAGGGTAACTTCTACACCTTAAGATTGTTATGGGAGAACTTGGCTTCTTCTATGTATATGTAATTTATCATTTGTTTTCCTTCGGTTTAGTATCATACCTATATGTGCAGGTATGTTGAATTTGTGGATGCAATGTCTGTGCCCATGGCTATTGCACTTTCCGGCCAGCTCCTGCTTAGTCAACCTGTGATGGTAAAGCCATCTGAAGCTGAGAAAAACCAGGTTCAATCAACTTCTGCTGCTGGTGGACCGGGTGGAGCAATGGGCCCCTACTCTGGTGGTGCCAGAAGGTTATATGTTGGCAATCTGCACCCCAACATAACTGAAGATAACCTTCGTCAGGTTTGTAAATGTCATGGGACATGATACAATTGTTACACAGTACAAATAGTTCTTGGTGGCTTGTGATATCTTGAATCAACTCTTTTATTTTAATTGCCATGTTCTGCAAAATTCAGTGTTTCTTTTCGTCTATTGTTAAAACGTTGACATTGTACTATTATAAGACGACCCTTCCTCTACTTCCAGGTTTTTGGAGCTTTTGGCACTGTGGAACTGGTCCAGATGCCCCTTGATGAATCTGGCCATTGCAAGGGTTTTGGTTTTATTCAGGTAATACATCAAGAGATTATTTTATTCTTTGAGAAGGGCACAGTAATGTTAGGGCATAAGCCTAATCAGAACTGTTTGGCTGCAGTTCACACGTCTTGAAGATGCTAGAAATGCACTGAGTTTGAATGGACAACTTGAGATTGCTGGTCGAACGATAAAGGTGATGCATATTCATCATGTTTTCACGTGCATGTATTCTTATGTGCTAATTTTTTGCTAGCATGCTTTGTATGCTCTTTTCCATGGTGTTGAATAGCAGTCAAATGCTAATCTCCTAATCGTGGGAGTCTTCTTCTGATTTATAAGGATTGAGAGTTCTTCAATGGAGTGAATTGGCATGTAAAGGGACAGCAGGGTGTATTTGGATGGAGTGGAATAGTGCAGAGTTAGGAGCTATGAAGTTTAGGGAGTGGCGAACTCCTGGGGCCCATAGGCTAAGGAGCTGATAAGATAAAAAAATGATGTTTTTAGTAGTGGGATCACTAACTCCTTTGGCCAAACACATCCCAGTTTAATCTTTTAATTTGAAGAGCTTTGAGGGTAAGTTTGTTGCCATTTTCTAATGCATTTTACATTCTTCTCCAAAAAAAGGTGGGCCTTTCGTTAAGTGTTTAGGTTGTTGCATCTTGTACCTGACAAATAGACAAGGTGTAGACTTAGAAGATTTTGATGCTTCAATTTTCAAGGGATGCAAATGCTCTAATCTCGTTGTGAACTTCTTCGTTTTCTCCTTCTAGGGAGAGATCTTGTAGGTTCTGATTACTCAAATTTTCAAGGTTGCATACACCCAAACTTGCCGTCTTCTTCTTTTTCGTCTTTGTCACGCTGTCTTCTTCTTCTTCGGTTATCTGATTAAGCAATATTGAAGTTTTCTCGCTGTGGGTGTTAGGTTTGATTACTGACAAGTTGATAGCACGTAGGGAGCAACATTTAGTATTCTAATACAAAAAATTATATTGTTGAAAGAGAAGTGGAAAGTAACAAAAAGATAGGTAGCCAAAAAGCTAGTACAAATATGGCGAGGTTTTCTTTAAATGCTCTTTTCACTTAATAATAGTAAAATATGTTGATTGGTTTTTTCGGTGCTTTGGAAGATTAAGATTTCAAGAAAAGTAAAATTCTTTACGTAGCAAGTTTTACATGGTCATGCTAATGCGATGGGTCGTCTTGTGTGGAAGTTGCCCTCGCTTGTTGGCTCATTTTGTTGTATTCTTTATCAGAAGGCGGAGGAAGACATGGATCATATTCTTGGGCACTGTGACTTCACGAGAGCTGTGGGATGAATTTTTCCAAATGTTTGGTTTCTCGAATGCACGTCATAGGGTTACTAGTGATATGATCAGTGAGTTCCTCCTCTTTTTAGGAGAAAGGGTGTTTTTAATGGATGGCTGGGGCGTATGCTGTTCTTTGGGTCCTATGGGGGAAACAGAATATCAGGATGTTTCGAGCGTTAGAGAGACTCAAATATATATACATAAATACATATATGTATGTATATGTTTTCTACCTTGTTAGATACCATATTTCTCATAATATTTTGTTATCTTCTTATACAGGTGTCTACAGTCACAGATCAGCCTGGTTTGCAAGATGTTGGAGCAAGTACAGGAGACCTTGATGAGGAAGACGGCGGTGGCTTGGTAAATAAATCTTTTGTCTTTGTTCCTCTCTGTCTATCTAATAAATGAAGCATAATTATGTTGCATCTTAAAGAATCACCAAGAAAGTTCAGTGAGTTGACGGATTTATTTCATGTTGTAATAGTTTCTCATCCATTGCTTCTATTACCGTTTGAAACTTGGAAGAATAAATTCGTATTTGTTTCTTTGTTTTTCGTCCTTTCTGCTTTATTAATGTTTATTATACCCAAATTCGTGGACATCATCCGTCAAAAAGTATGCCTCTCAGCTCTTTCTTACTCCATTTTCTTTATTTTTTTTTAAATATCATTTCATTTGTTTAGTCGTTCTTATTATTTGAATGGACCATTAGAGAATCAAGGTTGGTCTTTCTATCTTGGTGTGTGTTATTTTTGTATTTTTATTTTAACATAAAGTTCTATTCTTATTTCTTAGAGAAATATTTAAGTAAACACAGTCTTCCCCTCCCCCCCCACCCCCCTCACTTTTTAAATCCATGCTCGTCTCAAGGGCCAAGCATCAGAGATATCAAGAGTATTTTTGGTTTTTTTTAACACGCAGTTCTATTCTGAGAGAAATATTTAAGGTAACAAAGTTCGATCTTTTTTAGCTTGTGCCTGCATGTGGGCCAAGCTTTAGAGATATTAAGGATATAAGCGTCTTCCTTTTGAGCTCACCTGAAGGTTCAAACATGCAGACCTTTGGACAAGTGTTTGTCAAAGATTGAGTGCTTAGCCTAATGGGGCGCCTCTTATGGGGCTCAAGTTGTCCAACTTGATTTTTTTGTTTACACTACTTTCACAGGCTTCGTGATTTATTTATGGTCGTTGGCCACGGTAATATTAGTTACCCTTTTTTCTTTCTTTCTTTGGGAAGTGTATTTTAAACCTCATTATGTAAAAACTTACGATGTAACTTGTGATAGTAACTACTTTCTATATTATCTATCCTCTTTACAGTTACACCAAAGATTTTGAAAGTTTCTGGCTGAAACCTTTGACAAAGAGTTCTGTGTACTTTAGCCTCTACGTTAACAAATATGTTTCTAATTTTCAGTCTTTAAACGCTAGTTCTCGAGCATCCCTGATGCAGAAGCTGGACCGTACTGGTGCCGCATCTAGGTTTGTCTTTGTTGAGCTTATTATCATTTGGAAATTTTCAATCAAAAAATTATCTGAAATTTGCATGTTGGTCTTATATCTGTTCTCTCTGCAGCATTGCTGGTTCTTTAGGTACACATGTTGTAAATAACACAGGTGCTACTATGCCCGCACCGATCCTGGGAGGTGCAACTATCCCATCCCTCGGTGTTGGTACTTCCTTGGCTGCCTTTCCTGCTTTTCCTGGACTTGGTGCAGGCGTTCAGGTTCCCCCCGTCACTGCCAATTTACTTGGTGTTGGTACTCCAAGTGAATGTCTACTGTTGAAGAATATGTTTGATCCTACAGCTGAGGTATGCTGCAGCATTCTGAAGGTATATGTTAAATTTTCTGTTTATGTCTAAGTTTAACTTGTTACCCTTATGTTTGGCAGTCGGAACCAACTTTCGATCTGGATATCCGAGATGACGTTGAAGAGGAATGCTCTAGGTTTGGAAAATTGAAACATATATACGTTGACAAGTAAGTTTAGGACTTCGAGTTCATGAAGCTACTGCATATAGTTTCTAGGGCCAATTGCAAAACTAAACCCTTAGGTATGGGGATAGTTGCAATTACATTCTCAAACGTCCATTTGTGAAAATTGAGCTCTCAAACTTATACAAATATTAATATTGGACGTTCATACTTATAATATTTGTAGAAATTTGACCCTAAAACTTACGATGGTATGGTTGATAGATGCAATTACAACCTCAATTTCTTTCTTCTTTTCTGCATTTGGAGGTCAAATTTCTACTACTATTGTAAGTTTGAGGGTCCCATTTTAACACTAATATAAATTTAAGTGCTCAACTTTTACAATTAAAAATTCGAGAGCGTAATTGCAACTACCATCATACTCCAAGTGCAAATTTTGCAATTTGACCTAGTTTTTAATTCCTTCCCATTTCCTCAAACATTGTGTGTTCTTTATTTCTTTATGGACAGGAATAGCGCCGGTTTTGTATATTTGAGGTTTGAAAAGCCAGAGTCTGCAACTGAAGCCCAACGTGCCCTGAATGGAAGATGGTTTGCTGGGAAAATGATTGGTGCAACTTTCATGGTAAATCTTTGGTCGTTGTCTTTACCTTCATCTGTTAGTACAATGTCACTAACTCTTTTATGGAATTTTGTTCGAATACCGCATAACAAGAAAACTCAAGAATCATAAAGAACACTAAAAGATTAGAAATTAATATTGCAATACTAACGAAGAAACTACAATATACCATGGCCTTTCTTTGGAGAGGGCTACCTCCCTCATATTCCCCAAAGGAAATCAACAATTTTTTACCTATCAAGTCTCAACCCCACTCCCTCTACTTATAACTAAAAGCTCTAATGAACTTACTATCTATTTACTAATATGTTCCTTCTGATAGAGTGATGACCATTCTAATTATCCTGAAATTTTCCTAATTAAGAGTCTTATAAATTTCTTACGAATCTTCAGGACATTCCAAGCTATGAAGCGAAATTTCCAGACAGCAGATAACACACATCCAAGCTTAGTTTGAATACTCTACTCTGAAATGATTACCGGCCTGTCAATCCGTTGATTATTCTGAAGTGGCTTAAAGATGCCAAGGTCAGAAGATGATTTGTATCTCTTTGAAAGGTACCAATTTACTATTTATGAGCACGATGGCCTAGCGAACGAAGACGGTGAAAGGAAATTGCGTAAACCTATATAGGATCTATTGTTAAACAGAATATTGAAAAGTTGATTGTAGTATAGCTCAGATATGGCCCTTTGTATGTTCTATTAGGAGTTCTTTAATCTGAACCTGATTTGACATAGGAAACTCTGTGCCCATTCTTCAGCTTGCTCGATTTATATCTAAAGACATCCTAGGAGATCTGCAATGTTACGACGCTGTTTATGTTTATGCATATTATTTTA

mRNA sequence

CCAAATTCTTCGCCGCAGCGTACCTCAAAAGGAACTGTGACCCAGCAGCGGAAGCACCAGCAACAATCCAGTTTATCATCCTCCTTCTGCGTGTCTTTATCAATCACCTGGAGGCTGCAGCTGGTGAGCATAGCTCAATTTTTTTTTCCGCGCTGTGGAGTTTTTTCGCAGTTTAGAGGACACTGTTTAGCTGCTGTATGTTGCATAATTCGCTTTAGAGACGGTAGTTATGGATTTTGACGAGTATGATTATTTGGAGAAAACAGTTGAAAACCCCGAGGGACAAAAAGTGAAGGAAACTGCCAATGGCGGTGATGGAGAAATGAAATCTGGAGATAAGCATTATAGTCGGAGTTTAAAATATAAGAGTGATGGTAAAGATGATGGGGAACATAGGTCAAAGCGTTCGAAATCGGATGATGAGTCACGTGATCGAGACCGGCATAGAGATAGGACTTCTTCCCGTCATCGCTCTAGGTCCAGAGAGAGGGACCGTGATAAGCATCGAAGCTCCAAGGAAAATAGGGGAAAAGATGACAGAGAAGGGAATCGGGAAGAGAGAAGCAGTAAGGACAGGGATGTGGACAGAGATAAAGAACGTTCTCATGATCGTGATAGACGGGGTAGAGATGGTGAAAGGAATAGGGAAAGAGAACGATCACGTCGAAGTAGAAGTCGTTCAGAAAGACATCGCAGTGATCGTGACGATGGCATAAGAGAGAGGAGCCGAGATAATGAACTCAGAGAAAGAGAAAAGGAGAGAGAGTCTAGAGAGCGAGGCAGAGATGGCAGAAGATATAAAGATAAAAAGGACGAAGCAGCTGAACCAGAAGCTGATCCTGAAAGGGATCAGAGGACTGTATTTGCCTATCAGATAAGTTTAAAGGCAACTGAAAGAGATGTGTACGAGTTCTTCTCCAGGGCTGGTAAGGTGCGAGATGTACGCCTCATAATGGATCGTAATTCACGGCGTTCTAAAGGCGTTGGGTATGTTGAATTTGTGGATGCAATGTCTGTGCCCATGGCTATTGCACTTTCCGGCCAGCTCCTGCTTAGTCAACCTGTGATGGTAAAGCCATCTGAAGCTGAGAAAAACCAGGTTCAATCAACTTCTGCTGCTGGTGGACCGGGTGGAGCAATGGGCCCCTACTCTGGTGGTGCCAGAAGGTTATATGTTGGCAATCTGCACCCCAACATAACTGAAGATAACCTTCGTCAGGTTTTTGGAGCTTTTGGCACTGTGGAACTGGTCCAGATGCCCCTTGATGAATCTGGCCATTGCAAGGGTTTTGGTTTTATTCAGTTCACACGTCTTGAAGATGCTAGAAATGCACTGAGTTTGAATGGACAACTTGAGATTGCTGGTCGAACGATAAAGGTGTCTACAGTCACAGATCAGCCTGGTTTGCAAGATGTTGGAGCAAGTACAGGAGACCTTGATGAGGAAGACGGCGGTGGCTTGTCTTTAAACGCTAGTTCTCGAGCATCCCTGATGCAGAAGCTGGACCGTACTGGTGCCGCATCTAGCATTGCTGGTTCTTTAGGTACACATGTTGTAAATAACACAGGTGCTACTATGCCCGCACCGATCCTGGGAGGTGCAACTATCCCATCCCTCGGTGTTGGTACTTCCTTGGCTGCCTTTCCTGCTTTTCCTGGACTTGGTGCAGGCGTTCAGGTTCCCCCCGTCACTGCCAATTTACTTGGTGTTGGTACTCCAAGTGAATGTCTACTGTTGAAGAATATGTTTGATCCTACAGCTGAGTCGGAACCAACTTTCGATCTGGATATCCGAGATGACGTTGAAGAGGAATGCTCTAGGTTTGGAAAATTGAAACATATATACGTTGACAAGAATAGCGCCGGTTTTGTATATTTGAGGTTTGAAAAGCCAGAGTCTGCAACTGAAGCCCAACGTGCCCTGAATGGAAGATGGTTTGCTGGGAAAATGATTGGTGCAACTTTCATGGACATTCCAAGCTATGAAGCGAAATTTCCAGACAGCAGATAACACACATCCAAGCTTAGTTTGAATACTCTACTCTGAAATGATTACCGGCCTGTCAATCCGTTGATTATTCTGAAGTGGCTTAAAGATGCCAAGGTCAGAAGATGATTTGTATCTCTTTGAAAGGTACCAATTTACTATTTATGAGCACGATGGCCTAGCGAACGAAGACGGTGAAAGGAAATTGCGTAAACCTATATAGGATCTATTGTTAAACAGAATATTGAAAAGTTGATTGTAGTATAGCTCAGATATGGCCCTTTGTATGTTCTATTAGGAGTTCTTTAATCTGAACCTGATTTGACATAGGAAACTCTGTGCCCATTCTTCAGCTTGCTCGATTTATATCTAAAGACATCCTAGGAGATCTGCAATGTTACGACGCTGTTTATGTTTATGCATATTATTTTA

Coding sequence (CDS)

ATGGATTTTGACGAGTATGATTATTTGGAGAAAACAGTTGAAAACCCCGAGGGACAAAAAGTGAAGGAAACTGCCAATGGCGGTGATGGAGAAATGAAATCTGGAGATAAGCATTATAGTCGGAGTTTAAAATATAAGAGTGATGGTAAAGATGATGGGGAACATAGGTCAAAGCGTTCGAAATCGGATGATGAGTCACGTGATCGAGACCGGCATAGAGATAGGACTTCTTCCCGTCATCGCTCTAGGTCCAGAGAGAGGGACCGTGATAAGCATCGAAGCTCCAAGGAAAATAGGGGAAAAGATGACAGAGAAGGGAATCGGGAAGAGAGAAGCAGTAAGGACAGGGATGTGGACAGAGATAAAGAACGTTCTCATGATCGTGATAGACGGGGTAGAGATGGTGAAAGGAATAGGGAAAGAGAACGATCACGTCGAAGTAGAAGTCGTTCAGAAAGACATCGCAGTGATCGTGACGATGGCATAAGAGAGAGGAGCCGAGATAATGAACTCAGAGAAAGAGAAAAGGAGAGAGAGTCTAGAGAGCGAGGCAGAGATGGCAGAAGATATAAAGATAAAAAGGACGAAGCAGCTGAACCAGAAGCTGATCCTGAAAGGGATCAGAGGACTGTATTTGCCTATCAGATAAGTTTAAAGGCAACTGAAAGAGATGTGTACGAGTTCTTCTCCAGGGCTGGTAAGGTGCGAGATGTACGCCTCATAATGGATCGTAATTCACGGCGTTCTAAAGGCGTTGGGTATGTTGAATTTGTGGATGCAATGTCTGTGCCCATGGCTATTGCACTTTCCGGCCAGCTCCTGCTTAGTCAACCTGTGATGGTAAAGCCATCTGAAGCTGAGAAAAACCAGGTTCAATCAACTTCTGCTGCTGGTGGACCGGGTGGAGCAATGGGCCCCTACTCTGGTGGTGCCAGAAGGTTATATGTTGGCAATCTGCACCCCAACATAACTGAAGATAACCTTCGTCAGGTTTTTGGAGCTTTTGGCACTGTGGAACTGGTCCAGATGCCCCTTGATGAATCTGGCCATTGCAAGGGTTTTGGTTTTATTCAGTTCACACGTCTTGAAGATGCTAGAAATGCACTGAGTTTGAATGGACAACTTGAGATTGCTGGTCGAACGATAAAGGTGTCTACAGTCACAGATCAGCCTGGTTTGCAAGATGTTGGAGCAAGTACAGGAGACCTTGATGAGGAAGACGGCGGTGGCTTGTCTTTAAACGCTAGTTCTCGAGCATCCCTGATGCAGAAGCTGGACCGTACTGGTGCCGCATCTAGCATTGCTGGTTCTTTAGGTACACATGTTGTAAATAACACAGGTGCTACTATGCCCGCACCGATCCTGGGAGGTGCAACTATCCCATCCCTCGGTGTTGGTACTTCCTTGGCTGCCTTTCCTGCTTTTCCTGGACTTGGTGCAGGCGTTCAGGTTCCCCCCGTCACTGCCAATTTACTTGGTGTTGGTACTCCAAGTGAATGTCTACTGTTGAAGAATATGTTTGATCCTACAGCTGAGTCGGAACCAACTTTCGATCTGGATATCCGAGATGACGTTGAAGAGGAATGCTCTAGGTTTGGAAAATTGAAACATATATACGTTGACAAGAATAGCGCCGGTTTTGTATATTTGAGGTTTGAAAAGCCAGAGTCTGCAACTGAAGCCCAACGTGCCCTGAATGGAAGATGGTTTGCTGGGAAAATGATTGGTGCAACTTTCATGGACATTCCAAGCTATGAAGCGAAATTTCCAGACAGCAGATAA

Protein sequence

MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRSKSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDRDKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERESRERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLGVGTSLAAFPAFPGLGAGVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR

Homology

[Close]

BLAST of MELO3C013338 vs. NCBI nr
Match: XP_008447936.1 (PREDICTED: RNA-binding protein 39 isoform X1 [Cucumis melo] >XP_016900486.1 PREDICTED: RNA-binding protein 39 isoform X1 [Cucumis melo])

HSP 1 Score: 1094.0 bits (2828), Expect = 0.0e+00
Identity = 593/593 (100.00%), Postives = 593/593 (100.00%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS 60

Query: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR 120
           KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR
Sbjct: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR 120

Query: 121 DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES 180
           DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES
Sbjct: 121 DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES 180

Query: 181 RERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240
           RERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL
Sbjct: 181 RERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240

Query: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP 300
           IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP
Sbjct: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP 300

Query: 301 GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFT 360
           GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFT
Sbjct: 301 GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFT 360

Query: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS 420
           RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS
Sbjct: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS 420

Query: 421 LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLGVGTSLAAFPAFPGLGA 480
           LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLGVGTSLAAFPAFPGLGA
Sbjct: 421 LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLGVGTSLAAFPAFPGLGA 480

Query: 481 GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV 540
           GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV
Sbjct: 481 GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV 540

Query: 541 DKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 594
           DKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR
Sbjct: 541 DKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 593

[Close]

BLAST of MELO3C013338 vs. NCBI nr
Match: XP_008447937.1 (PREDICTED: RNA-binding protein 39 isoform X2 [Cucumis melo])

HSP 1 Score: 1088.2 bits (2813), Expect = 0.0e+00
Identity = 592/593 (99.83%), Postives = 592/593 (99.83%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS 60

Query: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR 120
           KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR
Sbjct: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR 120

Query: 121 DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES 180
           DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES
Sbjct: 121 DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES 180

Query: 181 RERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240
           RERGRDG RYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL
Sbjct: 181 RERGRDG-RYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240

Query: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP 300
           IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP
Sbjct: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP 300

Query: 301 GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFT 360
           GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFT
Sbjct: 301 GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFT 360

Query: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS 420
           RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS
Sbjct: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS 420

Query: 421 LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLGVGTSLAAFPAFPGLGA 480
           LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLGVGTSLAAFPAFPGLGA
Sbjct: 421 LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLGVGTSLAAFPAFPGLGA 480

Query: 481 GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV 540
           GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV
Sbjct: 481 GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV 540

Query: 541 DKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 594
           DKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR
Sbjct: 541 DKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 592

[Close]

BLAST of MELO3C013338 vs. NCBI nr
Match: XP_011658601.1 (RNA-binding protein 39 isoform X1 [Cucumis sativus] >XP_031744308.1 RNA-binding protein 39 isoform X1 [Cucumis sativus] >XP_031744309.1 RNA-binding protein 39 isoform X1 [Cucumis sativus] >KGN43267.1 hypothetical protein Csa_020331 [Cucumis sativus])

HSP 1 Score: 1069.7 bits (2765), Expect = 9.1e-309
Identity = 580/593 (97.81%), Postives = 586/593 (98.82%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKH+SRS KYKSDGKDDGEHRSK  
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGEHRSKHL 60

Query: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR 120
           KSDDESRDRDRHRDRTSSRHRSRSRERDRD+HRSSKENRGK+DREGNREERSSKDRDVDR
Sbjct: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDRHRSSKENRGKEDREGNREERSSKDRDVDR 120

Query: 121 DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES 180
           DKERSHDRDRRGRDGERNRERE+SRRSRSRSERHRSDRDDGIRERSRDNELREREKERES
Sbjct: 121 DKERSHDRDRRGRDGERNREREQSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES 180

Query: 181 RERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240
           RERGRDGRRYKDKKDE AEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL
Sbjct: 181 RERGRDGRRYKDKKDETAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240

Query: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP 300
           IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP
Sbjct: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP 300

Query: 301 GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFT 360
           GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMP+DESGHCKGFGFIQFT
Sbjct: 301 GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFIQFT 360

Query: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS 420
           RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS
Sbjct: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS 420

Query: 421 LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLGVGTSLAAFPAFPGLGA 480
           LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSL VGTSLAAFPAFPGLGA
Sbjct: 421 LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLSVGTSLAAFPAFPGLGA 480

Query: 481 GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV 540
           GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV
Sbjct: 481 GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV 540

Query: 541 DKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 594
           D+NSAGFVYLRFEK ESA EAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR
Sbjct: 541 DRNSAGFVYLRFEKSESAMEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 593

[Close]

BLAST of MELO3C013338 vs. NCBI nr
Match: XP_011658603.1 (RNA-binding protein 39 isoform X2 [Cucumis sativus])

HSP 1 Score: 1063.9 bits (2750), Expect = 5.0e-307
Identity = 579/593 (97.64%), Postives = 585/593 (98.65%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKH+SRS KYKSDGKDDGEHRSK  
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGEHRSKHL 60

Query: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR 120
           KSDDESRDRDRHRDRTSSRHRSRSRERDRD+HRSSKENRGK+DREGNREERSSKDRDVDR
Sbjct: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDRHRSSKENRGKEDREGNREERSSKDRDVDR 120

Query: 121 DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES 180
           DKERSHDRDRRGRDGERNRERE+SRRSRSRSERHRSDRDDGIRERSRDNELREREKERES
Sbjct: 121 DKERSHDRDRRGRDGERNREREQSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES 180

Query: 181 RERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240
           RERGRDG RYKDKKDE AEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL
Sbjct: 181 RERGRDG-RYKDKKDETAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240

Query: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP 300
           IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP
Sbjct: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP 300

Query: 301 GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFT 360
           GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMP+DESGHCKGFGFIQFT
Sbjct: 301 GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFIQFT 360

Query: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS 420
           RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS
Sbjct: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS 420

Query: 421 LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLGVGTSLAAFPAFPGLGA 480
           LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSL VGTSLAAFPAFPGLGA
Sbjct: 421 LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLSVGTSLAAFPAFPGLGA 480

Query: 481 GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV 540
           GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV
Sbjct: 481 GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV 540

Query: 541 DKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 594
           D+NSAGFVYLRFEK ESA EAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR
Sbjct: 541 DRNSAGFVYLRFEKSESAMEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 592

[Close]

BLAST of MELO3C013338 vs. NCBI nr
Match: XP_038887515.1 (RNA-binding protein 39-like isoform X2 [Benincasa hispida])

HSP 1 Score: 1018.5 bits (2632), Expect = 2.4e-293
Identity = 557/594 (93.77%), Postives = 572/594 (96.30%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQKVKETANGGD +MKSGDKH SRS KYKSD KDDGEHRSKRS
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDADMKSGDKHRSRSSKYKSDSKDDGEHRSKRS 60

Query: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR 120
           KS+DESRD+DRHRD    RHRSR  ERDRD+HRSSKENRGK+DREGN EERSS+DRDVDR
Sbjct: 61  KSEDESRDQDRHRD----RHRSRFGERDRDRHRSSKENRGKEDREGNHEERSSRDRDVDR 120

Query: 121 DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES 180
           DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRD+GIRERSRDNELRERE+ERES
Sbjct: 121 DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDEGIRERSRDNELRERERERES 180

Query: 181 RERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240
           RERGRDGRRYKDKK+EAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL
Sbjct: 181 RERGRDGRRYKDKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240

Query: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP 300
           IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQST+AAGGP
Sbjct: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTAAAGGP 300

Query: 301 GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFT 360
           GG MGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQF+
Sbjct: 301 GGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFS 360

Query: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS 420
           RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQD+GA+TGDLD+EDGGGLSLNASSRAS
Sbjct: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGANTGDLDDEDGGGLSLNASSRAS 420

Query: 421 LMQKLDRTGAASSIAGSLGTHVVNNTGATMP-APILGGATIPSLGVGTSLAAFPAFPGLG 480
           LMQKLDRT AASSIAGSLGTHVVNNTGA MP APILGGATIPSL VGTSLAAFPAFPGLG
Sbjct: 421 LMQKLDRTRAASSIAGSLGTHVVNNTGAAMPMAPILGGATIPSLAVGTSLAAFPAFPGLG 480

Query: 481 AGVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIY 540
           AGV VP V A+LLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIY
Sbjct: 481 AGVHVPAVAASLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIY 540

Query: 541 VDKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 594
           VDKNSAGFVYLRFEK ESA EAQRALNGRWFAGKMIGATFMDIPSYE KFPDSR
Sbjct: 541 VDKNSAGFVYLRFEKSESAMEAQRALNGRWFAGKMIGATFMDIPSYEVKFPDSR 590

[Close]

BLAST of MELO3C013338 vs. ExPASy Swiss-Prot
Match: Q5RC80 (RNA-binding protein 39 OS=Pongo abelii OX=9601 GN=RBM39 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.7e-61
Identity = 204/530 (38.49%), Postives = 287/530 (54.15%), Query Frame = 0


Query: 69  RDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDRDKERSHDR 128
           +D ++  +++ H  RS++R + K RS    R    R  ++E + S+DR  +R K +S +R
Sbjct: 17  KDENKLSSANGHEERSKKRKKSKSRSRSHER---KRSKSKERKRSRDR--ERKKSKSRER 76

Query: 129 DRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERESRERGRDGR 188
            +R R  ER R R RSR  R R  R+RS         +   ++      + SR R R   
Sbjct: 77  -KRSRSKERRRSRSRSRDRRFRG-RYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSKS 136

Query: 189 RYKDKKDEAAEP---EADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRLIMDRN 248
            ++  K    EP       ERD RTVF  Q++ +   RD+ EFFS  GKVRDVR+I DRN
Sbjct: 137 PFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRN 196

Query: 249 SRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMG 308
           SRRSKG+ YVEFVD  SVP+AI L+GQ +L  P++V+ S+AEKN+      A      + 
Sbjct: 197 SRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR------AAAMANNLQ 256

Query: 309 PYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLD-ESGHCKGFGFIQFTRLED 368
             S G  RLYVG+LH NITED LR +F  FG +E +Q+ +D E+G  KG+GFI F+  E 
Sbjct: 257 KGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSEC 316

Query: 369 ARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQK 428
           A+ AL      E+AGR +KV  VT++       +S  D DE +  G+ L  + R  LM +
Sbjct: 317 AKKALEQLNGFELAGRPMKVGHVTERTDASS-ASSFLDSDELERTGIDLGTTGRLQLMAR 376

Query: 429 LDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLG-VGTSLAAFPAFPGLGAGVQ 488
           L           + GT +     A     + G     ++  + T L+       L A   
Sbjct: 377 L-----------AEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAAS 436

Query: 489 VPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKN 548
           V P+          ++C  L NMF+P  E E  +D +I+DDV EEC++ G + HIYVDKN
Sbjct: 437 VQPLA---------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN 496

Query: 549 SA-GFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDS 593
           SA G VY++     +A  A  AL+GRWFAGKMI A ++ +P+Y   FPDS
Sbjct: 497 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDS 512

[Close]

BLAST of MELO3C013338 vs. ExPASy Swiss-Prot
Match: Q8VH51 (RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2)

HSP 1 Score: 236.5 bits (602), Expect = 7.7e-61
Identity = 204/530 (38.49%), Postives = 290/530 (54.72%), Query Frame = 0


Query: 69  RDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDRDKERSHDR 128
           +D ++  +++ H  RS++R + K RS    R    R  ++E + S+DR  +R K +S +R
Sbjct: 17  KDENKLNSANGHEERSKKRKKSKSRSRSHER---KRSKSKERKRSRDR--ERKKSKSRER 76

Query: 129 DRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERESRERGRDGR 188
            +R R  ER R R RSR  R R  R+RS         +   ++      + SR R R   
Sbjct: 77  -KRSRSKERRRSRSRSRDRRFRG-RYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSKS 136

Query: 189 RYKDKKDEAAEP---EADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRLIMDRN 248
            ++  K    EP       ERD RTVF  Q++ +   RD+ EFFS  GKVRDVR+I DRN
Sbjct: 137 PFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRN 196

Query: 249 SRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMG 308
           SRRSKG+ YVEFVD  SVP+AI L+GQ +L  P++V+ S+AEKN+      A      + 
Sbjct: 197 SRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR------AAAMANNLQ 256

Query: 309 PYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLD-ESGHCKGFGFIQFTRLED 368
             S G  RLYVG+LH NITED LR +F  FG +E +Q+ +D E+G  KG+GFI F+  E 
Sbjct: 257 KGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSEC 316

Query: 369 ARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQK 428
           A+ AL      E+AGR +KV  VT++       +S  D DE +  G+ L  + R  LM +
Sbjct: 317 AKKALEQLNGFELAGRPMKVGHVTERTDASS-ASSFLDSDELERTGIDLGTTGRLQLMAR 376

Query: 429 L-DRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLGVGTSLAAFPAFPGLGAGVQ 488
           L + TG     A       +  +G+     +   + +  + + T L+       L A   
Sbjct: 377 LAEGTGLQIPPAAQ---QALQMSGSLAFGAVAEFSFV--IDLQTRLSQQTEASALAAAAS 436

Query: 489 VPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKN 548
           V P+          ++C  L NMF+P  E E  +D +I+DDV EEC++ G + HIYVDKN
Sbjct: 437 VQPLA---------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN 496

Query: 549 SA-GFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDS 593
           SA G VY++     +A  A  AL+GRWFAGKMI A ++ +P+Y   FPDS
Sbjct: 497 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDS 518

[Close]

BLAST of MELO3C013338 vs. ExPASy Swiss-Prot
Match: Q14498 (RNA-binding protein 39 OS=Homo sapiens OX=9606 GN=RBM39 PE=1 SV=2)

HSP 1 Score: 236.1 bits (601), Expect = 1.0e-60
Identity = 204/530 (38.49%), Postives = 290/530 (54.72%), Query Frame = 0


Query: 69  RDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDRDKERSHDR 128
           +D ++  +++ H  RS++R + K RS    R    R  ++E + S+DR  +R K +S +R
Sbjct: 17  KDENKLSSANGHEERSKKRKKSKSRSRSHER---KRSKSKERKRSRDR--ERKKSKSRER 76

Query: 129 DRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERESRERGRDGR 188
            +R R  ER R R RSR  R R  R+RS         +   ++      + SR R R   
Sbjct: 77  -KRSRSKERRRSRSRSRDRRFRG-RYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSKS 136

Query: 189 RYKDKKDEAAEP---EADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRLIMDRN 248
            ++  K    EP       ERD RTVF  Q++ +   RD+ EFFS  GKVRDVR+I DRN
Sbjct: 137 PFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRN 196

Query: 249 SRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMG 308
           SRRSKG+ YVEFVD  SVP+AI L+GQ +L  P++V+ S+AEKN+      A      + 
Sbjct: 197 SRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR------AAAMANNLQ 256

Query: 309 PYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLD-ESGHCKGFGFIQFTRLED 368
             S G  RLYVG+LH NITED LR +F  FG +E +Q+ +D E+G  KG+GFI F+  E 
Sbjct: 257 KGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSEC 316

Query: 369 ARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQK 428
           A+ AL      E+AGR +KV  VT++       +S  D DE +  G+ L  + R  LM +
Sbjct: 317 AKKALEQLNGFELAGRPMKVGHVTERTDASS-ASSFLDSDELERTGIDLGTTGRLQLMAR 376

Query: 429 L-DRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLGVGTSLAAFPAFPGLGAGVQ 488
           L + TG     A       +  +G+     +   + +  + + T L+       L A   
Sbjct: 377 LAEGTGLQIPPAAQ---QALQMSGSLAFGAVAEFSFV--IDLQTRLSQQTEASALAAAAS 436

Query: 489 VPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKN 548
           V P+          ++C  L NMF+P  E E  +D +I+DDV EEC++ G + HIYVDKN
Sbjct: 437 VQPLA---------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKN 496

Query: 549 SA-GFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDS 593
           SA G VY++     +A  A  AL+GRWFAGKMI A ++ +P+Y   FPDS
Sbjct: 497 SAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDS 518

[Close]

BLAST of MELO3C013338 vs. ExPASy Swiss-Prot
Match: O13845 (RNA-binding protein rsd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rsd1 PE=1 SV=2)

HSP 1 Score: 155.2 bits (391), Expect = 2.3e-36
Identity = 169/564 (29.96%), Postives = 259/564 (45.92%), Query Frame = 0


Query: 39  YSRSLKYKSDGKDDGEHRSKRSKSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKEN 98
           Y+RS K     +D G        +DD   +   HR   + RH  RS     D    S   
Sbjct: 84  YARSSKQSFQREDSG-------YNDDVVTNSSSHR---TPRHHRRSYSPRSDYGSRSPSP 143

Query: 99  RGKDDREGNREERSSKDRDVDRDKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDR 158
               D   +R    S+DRD      RS     R R    +  R     SR    R R + 
Sbjct: 144 HSSVDSHQSRSPVRSRDRDRSSRSSRSRHPSSRSRHRYDDYSRSPPYSSRHSRSRRRYEE 203

Query: 159 DDGIRERSRDNELREREKERESRERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISL 218
                 R+ D +  +   +  S ER R   R +++  + +E     ERD+RTVF  Q++ 
Sbjct: 204 RSSRSSRAHDYDYEDLRDDDRSHERKRSRSRPRERSSKLSE----EERDRRTVFVSQLAN 263

Query: 219 KATERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQP 278
           + T R++Y+FF +AG VRD +++ D+ S RSKGV YVEF    SV  AIALSG+ LL  P
Sbjct: 264 RLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAAIALSGKRLLGLP 323

Query: 279 VMVKPSEAEKN-QVQSTSAAGGPGGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGT 338
           V+V+ +EAEKN + +  +       A  P+     RL V N+H N+T+++++ +F  FG 
Sbjct: 324 VIVQLTEAEKNRKAREAAELARAASAEIPF----HRLCVSNIHFNLTDEDVKAIFEPFGD 383

Query: 339 VELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVG 398
           +E V +  D+    KGFG+IQ+     ARNAL      ++AGR ++V    D+   +   
Sbjct: 384 IEFVHLQRDDQNRSKGFGYIQYRNPISARNALEKMNGFDLAGRNMRVCLGNDKFTTETTS 443

Query: 399 ASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSI-------AGSLGTHVVNNTGATM 458
           +     DE           +R    Q   R G +S+        A  L      +   T 
Sbjct: 444 SMLKRFDE---------TLARQERSQPSQRNGGSSTYESQDYREAAPLSPTEEESRPITR 503

Query: 459 PAPILGGATIPSLGVGTSLAAFPAFPGLGAGVQVPPVTANLLGVGTPSECLLLKNMFDPT 518
              +   A    +   + L + P           PP+          S C LL+NMF+P 
Sbjct: 504 DELMKKLARSEDISDNSKLVSEPE----------PPIR---------SRCALLENMFNPA 563

Query: 519 AESEPTFDLDIRDDVEEEC-SRFGKLKHIYVDKNSAGFVYLRFEKPESATEAQRALNGRW 578
            E+ P +  ++  DV+EEC  ++GK+ HI V  N  G ++++FE  + A +A   L+ RW
Sbjct: 564 EETSPNWVQELEQDVKEECDEKYGKVVHIAVVPNELGQIFVKFENADFAEKAITGLHQRW 601

Query: 579 FAGKMIGATFMDIPSYEAKFPDSR 594
           F G+ I A+ +    Y  KFP+++
Sbjct: 624 FGGRTIKASILPETDYYFKFPNAK 601

[Close]

BLAST of MELO3C013338 vs. ExPASy Swiss-Prot
Match: Q86U06 (Probable RNA-binding protein 23 OS=Homo sapiens OX=9606 GN=RBM23 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 9.9e-32
Identity = 153/427 (35.83%), Postives = 218/427 (51.05%), Query Frame = 0


Query: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR 120
           K +DE + ++  +D  S+   S S         S  E  G        +++ S+  +  R
Sbjct: 20  KEEDEQQRKEVKKDYPSNTTSSTS--------NSGNETSGSSTIGETSKKKRSRSHNKSR 79

Query: 121 DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRS---DRDDGIRERSRDNELREREKE 180
           D++RS  RDR     +R R R    RS  R  RHRS   DR  G   RSRD+   +R   
Sbjct: 80  DRKRSRSRDR-----DRYRRRNSRSRSPGRQCRHRSRSWDRRHGSESRSRDHRREDRVHY 139

Query: 181 RE-----SRERGRDGRRYKDKKDEAAEPE---ADPERDQRTVFAYQISLKATERDVYEFF 240
           R          G     +  +K    EP    +  ERD RTVF  Q++ +   RD+ +FF
Sbjct: 140 RSPPLATGYRYGHSKSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFF 199

Query: 241 SRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKN 300
           S  GKVRDVR+I DRNSRRSKG+ YVEF +  SVP+AI L+GQ LL  P++V+ S+AEKN
Sbjct: 200 SAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKN 259

Query: 301 QVQSTSAAGGPGGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVE-LVQMPLDES 360
           ++ + +     G      +GG  RLYVG+LH NITED LR +F  FG ++ +V M   ++
Sbjct: 260 RLAAMANNLQKG------NGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDT 319

Query: 361 GHCKGFGFIQFTRLEDARNALSLNGQLEIAGRTIKVSTVTDQ-PGLQDVGASTGDLDEE- 420
           G  KG+GFI F+  E AR AL      E+AGR ++V  VT++  G  D+    GD + + 
Sbjct: 320 GRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHVTERLDGGTDITFPDGDQELDL 379

Query: 421 --DGGGLSLNASSRASLMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLG 472
              GG   L A        +L  T AA++ A +    +  N    +P   L  A + +L 
Sbjct: 380 GSAGGRFQLMAKLAEGAGIQLPSTAAAAAAAAAQAAALQLN--GAVPLGALNPAALTALS 425

[Close]

BLAST of MELO3C013338 vs. ExPASy TrEMBL
Match: A0A1S3BIJ5 (RNA-binding protein 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490271 PE=4 SV=1)

HSP 1 Score: 1094.0 bits (2828), Expect = 0.0e+00
Identity = 593/593 (100.00%), Postives = 593/593 (100.00%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS 60

Query: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR 120
           KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR
Sbjct: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR 120

Query: 121 DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES 180
           DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES
Sbjct: 121 DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES 180

Query: 181 RERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240
           RERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL
Sbjct: 181 RERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240

Query: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP 300
           IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP
Sbjct: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP 300

Query: 301 GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFT 360
           GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFT
Sbjct: 301 GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFT 360

Query: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS 420
           RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS
Sbjct: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS 420

Query: 421 LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLGVGTSLAAFPAFPGLGA 480
           LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLGVGTSLAAFPAFPGLGA
Sbjct: 421 LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLGVGTSLAAFPAFPGLGA 480

Query: 481 GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV 540
           GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV
Sbjct: 481 GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV 540

Query: 541 DKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 594
           DKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR
Sbjct: 541 DKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 593

[Close]

BLAST of MELO3C013338 vs. ExPASy TrEMBL
Match: A0A1S3BJ70 (RNA-binding protein 39 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490271 PE=4 SV=1)

HSP 1 Score: 1088.2 bits (2813), Expect = 0.0e+00
Identity = 592/593 (99.83%), Postives = 592/593 (99.83%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS 60

Query: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR 120
           KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR
Sbjct: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR 120

Query: 121 DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES 180
           DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES
Sbjct: 121 DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES 180

Query: 181 RERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240
           RERGRDG RYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL
Sbjct: 181 RERGRDG-RYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240

Query: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP 300
           IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP
Sbjct: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP 300

Query: 301 GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFT 360
           GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFT
Sbjct: 301 GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFT 360

Query: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS 420
           RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS
Sbjct: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS 420

Query: 421 LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLGVGTSLAAFPAFPGLGA 480
           LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLGVGTSLAAFPAFPGLGA
Sbjct: 421 LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLGVGTSLAAFPAFPGLGA 480

Query: 481 GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV 540
           GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV
Sbjct: 481 GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV 540

Query: 541 DKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 594
           DKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR
Sbjct: 541 DKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 592

[Close]

BLAST of MELO3C013338 vs. ExPASy TrEMBL
Match: A0A0A0K4Q5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014530 PE=4 SV=1)

HSP 1 Score: 1069.7 bits (2765), Expect = 4.4e-309
Identity = 580/593 (97.81%), Postives = 586/593 (98.82%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKH+SRS KYKSDGKDDGEHRSK  
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGEHRSKHL 60

Query: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR 120
           KSDDESRDRDRHRDRTSSRHRSRSRERDRD+HRSSKENRGK+DREGNREERSSKDRDVDR
Sbjct: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDRHRSSKENRGKEDREGNREERSSKDRDVDR 120

Query: 121 DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES 180
           DKERSHDRDRRGRDGERNRERE+SRRSRSRSERHRSDRDDGIRERSRDNELREREKERES
Sbjct: 121 DKERSHDRDRRGRDGERNREREQSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES 180

Query: 181 RERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240
           RERGRDGRRYKDKKDE AEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL
Sbjct: 181 RERGRDGRRYKDKKDETAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240

Query: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP 300
           IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP
Sbjct: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP 300

Query: 301 GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFT 360
           GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMP+DESGHCKGFGFIQFT
Sbjct: 301 GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFIQFT 360

Query: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS 420
           RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS
Sbjct: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS 420

Query: 421 LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLGVGTSLAAFPAFPGLGA 480
           LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSL VGTSLAAFPAFPGLGA
Sbjct: 421 LMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLSVGTSLAAFPAFPGLGA 480

Query: 481 GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV 540
           GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV
Sbjct: 481 GVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYV 540

Query: 541 DKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 594
           D+NSAGFVYLRFEK ESA EAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR
Sbjct: 541 DRNSAGFVYLRFEKSESAMEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 593

[Close]

BLAST of MELO3C013338 vs. ExPASy TrEMBL
Match: A0A6J1HYU3 (RNA-binding protein 39 OS=Cucurbita maxima OX=3661 GN=LOC111468152 PE=4 SV=1)

HSP 1 Score: 970.7 bits (2508), Expect = 2.8e-279
Identity = 532/595 (89.41%), Postives = 557/595 (93.61%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQKVKETANGGD EMKSGDKH SRS KYK+DGKDDGEHRSKRS
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHRSRSSKYKTDGKDDGEHRSKRS 60

Query: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR 120
           KS+DES D DRHRDRTSSRHRSRSR+RDRD+H S KE RGK+DRE N+EERSSKDRDVDR
Sbjct: 61  KSEDESLDHDRHRDRTSSRHRSRSRDRDRDRHSSGKEFRGKEDREKNQEERSSKDRDVDR 120

Query: 121 DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES 180
           DKER HD DRRGRDGE++RERERS RSRS SERHRSDRD+ +R+R+RDNE REREKERES
Sbjct: 121 DKERVHDHDRRGRDGEKDRERERSHRSRSHSERHRSDRDESMRQRTRDNEFREREKERES 180

Query: 181 RERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240
           RERGRDGRR+K+KK++  EPEADPERDQRTVFAYQISLKATERDV+EFFSRAGKVRDVRL
Sbjct: 181 RERGRDGRRHKEKKEDGTEPEADPERDQRTVFAYQISLKATERDVFEFFSRAGKVRDVRL 240

Query: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP 300
           IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQ QSTSAA GP
Sbjct: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQAQSTSAAAGP 300

Query: 301 GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFT 360
           GG MGPY+GGARRLYVGNLHPNITEDNLRQVFGAFG VELVQMPLDESGHCKGFGFIQF+
Sbjct: 301 GGVMGPYTGGARRLYVGNLHPNITEDNLRQVFGAFGIVELVQMPLDESGHCKGFGFIQFS 360

Query: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS 420
           RLEDARNALSLNGQLEIAGR IKVSTVTDQPGLQD+GASTGDLD+EDG GLSLNASSRAS
Sbjct: 361 RLEDARNALSLNGQLEIAGRMIKVSTVTDQPGLQDIGASTGDLDDEDGVGLSLNASSRAS 420

Query: 421 LMQKLDRTGAASSIAGSLGTHVVNNTGATMP-APILGGATIPSLGVGTSLAAFPAFPGLG 480
           LMQKLDRTG ASSIAGSLGTHVVNNTGATMP APILG  TIPSLGV TSL + PAFPGLG
Sbjct: 421 LMQKLDRTGTASSIAGSLGTHVVNNTGATMPMAPILGVGTIPSLGVATSLVSVPAFPGLG 480

Query: 481 -AGVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHI 540
            AGVQVP V ANLLGVGTPSECLLLKNMFDPTAE EPTFD+DIRDDVEEECSRFGKLKHI
Sbjct: 481 AAGVQVPTVAANLLGVGTPSECLLLKNMFDPTAELEPTFDMDIRDDVEEECSRFGKLKHI 540

Query: 541 YVDKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 594
           YVDKNSAGFVYLRF   E+A +AQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR
Sbjct: 541 YVDKNSAGFVYLRFANSEAAMDAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 595

[Close]

BLAST of MELO3C013338 vs. ExPASy TrEMBL
Match: A0A6J1GM48 (RNA-binding protein 39-like OS=Cucurbita moschata OX=3662 GN=LOC111455622 PE=4 SV=1)

HSP 1 Score: 968.8 bits (2503), Expect = 1.1e-278
Identity = 532/595 (89.41%), Postives = 556/595 (93.45%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQKVKETANGGD EMKSGDKH SRS KYK+DGKDDGEHRSKRS
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHRSRSSKYKTDGKDDGEHRSKRS 60

Query: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR 120
           KS+DES D DRHRDRTSSRHRSRSR+RDRD+H S KE RGK+DRE N+EERSSKDRDVDR
Sbjct: 61  KSEDESLDHDRHRDRTSSRHRSRSRDRDRDRHSSGKEFRGKEDREKNQEERSSKDRDVDR 120

Query: 121 DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES 180
           DKER HD DRRGRDGE++RERERS RSRS SERHRSDRD+ IR+R+RDNE REREKERES
Sbjct: 121 DKERVHDHDRRGRDGEKDRERERSHRSRSHSERHRSDRDESIRQRTRDNEFREREKERES 180

Query: 181 RERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240
           RERGRDGRR+K+KK++  EPEADPERDQRTVFAYQISLKATERDV+EFFSRAGKVRDVRL
Sbjct: 181 RERGRDGRRHKEKKEDGTEPEADPERDQRTVFAYQISLKATERDVFEFFSRAGKVRDVRL 240

Query: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP 300
           IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQ QSTSAA GP
Sbjct: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQAQSTSAAAGP 300

Query: 301 GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFT 360
           GG MGPY+GGARRLYVGNLHPNITEDNLRQVFGAFG VELVQMPLDESGHCKGFGFIQF+
Sbjct: 301 GGVMGPYTGGARRLYVGNLHPNITEDNLRQVFGAFGIVELVQMPLDESGHCKGFGFIQFS 360

Query: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS 420
           RLEDARNALSLNGQLEIAGR IKVSTVTDQPGLQD+GASTGDLD+EDG GLSLNASSRAS
Sbjct: 361 RLEDARNALSLNGQLEIAGRMIKVSTVTDQPGLQDIGASTGDLDDEDGVGLSLNASSRAS 420

Query: 421 LMQKLDRTGAASSIAGSLGTHVVNNTGATMP-APILGGATIPSLGVGTSLAAFPAFPGLG 480
           LMQKLDRTG ASSIAGSLGTHVVNNTGATM  APILG  TIPSLGV TSL + PAFPGLG
Sbjct: 421 LMQKLDRTGTASSIAGSLGTHVVNNTGATMAMAPILGVGTIPSLGVATSLVSVPAFPGLG 480

Query: 481 -AGVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHI 540
            AGVQVP V ANLLGVGTPSECLLLKNMFDPTAE EPTFD+DIRDDVEEECSRFGKLKHI
Sbjct: 481 AAGVQVPTVAANLLGVGTPSECLLLKNMFDPTAELEPTFDMDIRDDVEEECSRFGKLKHI 540

Query: 541 YVDKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 594
           YVDKNSAGFVYLRF   E+A +AQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR
Sbjct: 541 YVDKNSAGFVYLRFANSEAAMDAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 595

[Close]

BLAST of MELO3C013338 vs. TAIR 10
Match: AT2G16940.1 (Splicing factor, CC1-like )

HSP 1 Score: 602.1 bits (1551), Expect = 5.0e-172
Identity = 373/600 (62.17%), Postives = 447/600 (74.50%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETAN-GGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKR 60
           MDFDEY+YLEKTVENP  +   E  N GGD ++KS  K  SRS            HR  +
Sbjct: 1   MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKVKSEGKERSRS----------SRHRGDK 60

Query: 61  SKSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKD-DREGNREERSSKDRDV 120
            K  DE  D  R   R+ S HRSRSR+R+RD+HRSS+E+R +D +++ ++EER+ KDR+ 
Sbjct: 61  KKERDEDED-GRRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDVDKEERNGKDRER 120

Query: 121 DRDKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKER 180
           DRDK    DRD +GRD     E++RSRRSRSRSERHRS        + R+  L    KER
Sbjct: 121 DRDK----DRDSKGRD----HEKDRSRRSRSRSERHRS--------QEREKSLEIEPKER 180

Query: 181 ESRERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDV 240
           E+++R RD RR+KDKK++  EPEADPERDQRTVFAYQI+L+ATERDVYEFFSRAGKVRDV
Sbjct: 181 ETKDRDRDRRRHKDKKEDKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDV 240

Query: 241 RLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAG 300
           R+IMDR SRRS+G+GYVEF D MSVPMAIALSGQ LL QPVMVKPSEAEKN VQST+AA 
Sbjct: 241 RIIMDRISRRSRGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAA 300

Query: 301 GPGGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQ 360
           G GG +GPYSGGARRLYVGNLH N++ED+LR+VF +FG+VELVQ+P DE+G CKGFGF+Q
Sbjct: 301 GAGGMLGPYSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQ 360

Query: 361 FTRLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVG--ASTGDLDEEDGGGLSLNAS 420
           F RLEDARNAL+LNGQLEIAGR IKVS VTDQ  + + G   +TGDLD++DGGGLSLNA 
Sbjct: 361 FARLEDARNALNLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQ 420

Query: 421 SRASLMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGG-ATIPSLGVGTSL-AAFPA 480
           SRA LMQKLDR+G ASS            TG T  A   GG +TI SL     +  +FPA
Sbjct: 421 SRALLMQKLDRSGTASS------------TGLTTAASFNGGVSTISSLAAPALVQGSFPA 480

Query: 481 FPGL-GAGVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFG 540
             GL G+G+    + A    +G PSECLLLKNMFDP+ E+E  FD DI++DV+EECS+FG
Sbjct: 481 VAGLAGSGIIPGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFG 540

Query: 541 KLKHIYVDKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 594
           KL HI+VDKNS GFVYLRFE  ++A  AQRAL+GRWFAGKMI AT+M   +YEAKFP+S+
Sbjct: 541 KLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKFPESK 559

[Close]

BLAST of MELO3C013338 vs. TAIR 10
Match: AT2G16940.3 (Splicing factor, CC1-like )

HSP 1 Score: 578.9 bits (1491), Expect = 4.5e-165
Identity = 373/638 (58.46%), Postives = 447/638 (70.06%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETAN-GGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKR 60
           MDFDEY+YLEKTVENP  +   E  N GGD ++KS  K  SRS            HR  +
Sbjct: 1   MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKVKSEGKERSRS----------SRHRGDK 60

Query: 61  SKSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKD-DREGNREERSSKDRDV 120
            K  DE  D  R   R+ S HRSRSR+R+RD+HRSS+E+R +D +++ ++EER+ KDR+ 
Sbjct: 61  KKERDEDED-GRRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDVDKEERNGKDRER 120

Query: 121 DRDKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKER 180
           DRDK    DRD +GRD     E++RSRRSRSRSERHRS        + R+  L    KER
Sbjct: 121 DRDK----DRDSKGRD----HEKDRSRRSRSRSERHRS--------QEREKSLEIEPKER 180

Query: 181 ESRERGRDGR-----------------------------RYKDKKDEAAEPEADPERDQR 240
           E+++R RD R                             R+KDKK++  EPEADPERDQR
Sbjct: 181 ETKDRDRDRRFILMLLGPLVLPSVQLDGALPCRDFSCFIRHKDKKEDKVEPEADPERDQR 240

Query: 241 TVFAYQISLKATERDVYEFFSRAGK---------VRDVRLIMDRNSRRSKGVGYVEFVDA 300
           TVFAYQI+L+ATERDVYEFFSRAGK         VRDVR+IMDR SRRS+G+GYVEF D 
Sbjct: 241 TVFAYQIALRATERDVYEFFSRAGKVCPFLCRFHVRDVRIIMDRISRRSRGIGYVEFYDT 300

Query: 301 MSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGNLH 360
           MSVPMAIALSGQ LL QPVMVKPSEAEKN VQST+AA G GG +GPYSGGARRLYVGNLH
Sbjct: 301 MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGGARRLYVGNLH 360

Query: 361 PNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIAGR 420
            N++ED+LR+VF +FG+VELVQ+P DE+G CKGFGF+QF RLEDARNAL+LNGQLEIAGR
Sbjct: 361 INMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALNLNGQLEIAGR 420

Query: 421 TIKVSTVTDQPGLQDVG--ASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL 480
            IKVS VTDQ  + + G   +TGDLD++DGGGLSLNA SRA LMQKLDR+G ASS     
Sbjct: 421 AIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGTASS----- 480

Query: 481 GTHVVNNTGATMPAPILGG-ATIPSLGVGTSL-AAFPAFPGL-GAGVQVPPVTANLLGVG 540
                  TG T  A   GG +TI SL     +  +FPA  GL G+G+    + A    +G
Sbjct: 481 -------TGLTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGVIPAGFDPIG 540

Query: 541 TPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKP 594
            PSECLLLKNMFDP+ E+E  FD DI++DV+EECS+FGKL HI+VDKNS GFVYLRFE  
Sbjct: 541 VPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVYLRFENA 597

[Close]

BLAST of MELO3C013338 vs. TAIR 10
Match: AT2G16940.2 (Splicing factor, CC1-like )

HSP 1 Score: 578.9 bits (1491), Expect = 4.5e-165
Identity = 373/649 (57.47%), Postives = 447/649 (68.88%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETAN-GGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKR 60
           MDFDEY+YLEKTVENP  +   E  N GGD ++KS  K  SRS            HR  +
Sbjct: 1   MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKVKSEGKERSRS----------SRHRGDK 60

Query: 61  SKSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKD-DREGNREERSSKDRDV 120
            K  DE  D  R   R+ S HRSRSR+R+RD+HRSS+E+R +D +++ ++EER+ KDR+ 
Sbjct: 61  KKERDEDED-GRRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDVDKEERNGKDRER 120

Query: 121 DRDKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKER 180
           DRDK    DRD +GRD     E++RSRRSRSRSERHRS        + R+  L    KER
Sbjct: 121 DRDK----DRDSKGRD----HEKDRSRRSRSRSERHRS--------QEREKSLEIEPKER 180

Query: 181 ESRERGRDGR-------------------------------------------------R 240
           E+++R RD R                                                 R
Sbjct: 181 ETKDRDRDRRYTSELVIDFIIYVHWYCLLYNLMGHVPFKIIIVIEGTSRASCVYAYWRKR 240

Query: 241 YKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRLIMDRNSRRS 300
           +KDKK++  EPEADPERDQRTVFAYQI+L+ATERDVYEFFSRAGKVRDVR+IMDR SRRS
Sbjct: 241 HKDKKEDKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRS 300

Query: 301 KGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSG 360
           +G+GYVEF D MSVPMAIALSGQ LL QPVMVKPSEAEKN VQST+AA G GG +GPYSG
Sbjct: 301 RGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSG 360

Query: 361 GARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNAL 420
           GARRLYVGNLH N++ED+LR+VF +FG+VELVQ+P DE+G CKGFGF+QF RLEDARNAL
Sbjct: 361 GARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNAL 420

Query: 421 SLNGQLEIAGRTIKVSTVTDQPGLQDVG--ASTGDLDEEDGGGLSLNASSRASLMQKLDR 480
           +LNGQLEIAGR IKVS VTDQ  + + G   +TGDLD++DGGGLSLNA SRA LMQKLDR
Sbjct: 421 NLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDR 480

Query: 481 TGAASSIAGSLGTHVVNNTGATMPAPILGG-ATIPSLGVGTSL-AAFPAFPGL-GAGVQV 540
           +G ASS            TG T  A   GG +TI SL     +  +FPA  GL G+G+  
Sbjct: 481 SGTASS------------TGLTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIP 540

Query: 541 PPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNS 594
             + A    +G PSECLLLKNMFDP+ E+E  FD DI++DV+EECS+FGKL HI+VDKNS
Sbjct: 541 GVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNS 600

[Close]

BLAST of MELO3C013338 vs. TAIR 10
Match: AT5G09880.1 (Splicing factor, CC1-like )

HSP 1 Score: 475.7 bits (1223), Expect = 5.4e-134
Identity = 331/594 (55.72%), Postives = 390/594 (65.66%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDG-EHRSKR 60
           M+FDEY+YLEKTVE   G   K+  +G +   +S  K      + +  G+++    RSK+
Sbjct: 1   MEFDEYEYLEKTVEEGAGSNKKKEESGNERSERSYRKREGGERQGEEGGEEERVSSRSKK 60

Query: 61  SKSDDESRDRDRHRDRTSSRHR-SRSRERDRDKHRSSKENRGKDDREGNREERSSKDRD- 120
           S+ D E     + RDR   RHR SR ++R+RDK R      G  D+E +R ERSSK+RD 
Sbjct: 61  SRGDGEENGGGK-RDRERERHRSSRDKDRERDKVR-----EGSRDKESDR-ERSSKERDR 120

Query: 121 VDRDKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKE 180
            DRDK R  DR+R          RER +RS SRS                    R  EKE
Sbjct: 121 SDRDKPR--DRER----------REREKRSSSRS--------------------RREEKE 180

Query: 181 RESRERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRD 240
            E  ERG   RR++DKKD   EPEADPERDQRTVFAYQ+ LKATERDVYEFFS+AGKVRD
Sbjct: 181 PEVVERG--SRRHRDKKD---EPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRD 240

Query: 241 VRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTS-A 300
           VRLIMDRNSRRSKGVGY+EF D MSVPMAIALSGQL L QPVMVKPSEAEKN  QS S  
Sbjct: 241 VRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLFLGQPVMVKPSEAEKNLAQSNSTT 300

Query: 301 AGGPGGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLD-ESGHCKGFG 360
            GG G A        R+LYVGNLH N++E  LRQ+F AFG VELVQ+PLD E+G CKGFG
Sbjct: 301 VGGTGPA-------DRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLPLDPETGQCKGFG 360

Query: 361 FIQFTRLEDARNA-LSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLN 420
           FIQF +LE ++ A ++LNG+LEIAGRTIKVS+V+D  G QD    + D D++DGGGL+LN
Sbjct: 361 FIQFVQLEHSKAAQIALNGKLEIAGRTIKVSSVSDHIGTQDSAPKSADFDDDDGGGLALN 420

Query: 421 ASSRASLMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPILGGATIPSLGVGTSLAAFPA 480
           A SRA LMQKLDR+G A+SI GSLG             P L GA     G+       P+
Sbjct: 421 AQSRAMLMQKLDRSGIATSIVGSLG------------VPGLNGAAFNQPGMN------PS 480

Query: 481 FPGLGAGVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGK 540
           FP         P   N   VG PSECLLLKNMFDP  E+EP FDL+IRDDV +ECS++G 
Sbjct: 481 FPTSVLPTTAIPSFVN-EHVGLPSECLLLKNMFDPATETEPNFDLEIRDDVADECSKYGP 524

Query: 541 LKHIYVDKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAK 589
           + HIYVDKNSAGFVYLRF+  E+A  AQRA++ RWFA KMI ATFM    YEAK
Sbjct: 541 VNHIYVDKNSAGFVYLRFQSVEAAAAAQRAMHMRWFAQKMISATFMPPHEYEAK 524

The following BLAST results are available for this feature:

BLAST of MELO3C013338 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447936.1	0.0e+00	100.00	PREDICTED: RNA-binding protein 39 isoform X1 [Cucumis melo] >XP_016900486.1 PRED...	[more]
XP_008447937.1	0.0e+00	99.83	PREDICTED: RNA-binding protein 39 isoform X2 [Cucumis melo]	[more]
XP_011658601.1	9.1e-309	97.81	RNA-binding protein 39 isoform X1 [Cucumis sativus] >XP_031744308.1 RNA-binding ...	[more]
XP_011658603.1	5.0e-307	97.64	RNA-binding protein 39 isoform X2 [Cucumis sativus]	[more]
XP_038887515.1	2.4e-293	93.77	RNA-binding protein 39-like isoform X2 [Benincasa hispida]	[more]

BLAST of MELO3C013338 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5RC80	2.7e-61	38.49	RNA-binding protein 39 OS=Pongo abelii OX=9601 GN=RBM39 PE=2 SV=1	[more]
Q8VH51	7.7e-61	38.49	RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2	[more]
Q14498	1.0e-60	38.49	RNA-binding protein 39 OS=Homo sapiens OX=9606 GN=RBM39 PE=1 SV=2	[more]
O13845	2.3e-36	29.96	RNA-binding protein rsd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ...	[more]
Q86U06	9.9e-32	35.83	Probable RNA-binding protein 23 OS=Homo sapiens OX=9606 GN=RBM23 PE=1 SV=1	[more]

BLAST of MELO3C013338 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BIJ5	0.0e+00	100.00	RNA-binding protein 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490271 PE=4 S...	[more]
A0A1S3BJ70	0.0e+00	99.83	RNA-binding protein 39 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490271 PE=4 S...	[more]
A0A0A0K4Q5	4.4e-309	97.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014530 PE=4 SV=1	[more]
A0A6J1HYU3	2.8e-279	89.41	RNA-binding protein 39 OS=Cucurbita maxima OX=3661 GN=LOC111468152 PE=4 SV=1	[more]
A0A6J1GM48	1.1e-278	89.41	RNA-binding protein 39-like OS=Cucurbita moschata OX=3662 GN=LOC111455622 PE=4 S...	[more]

BLAST of MELO3C013338 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16940.1	5.0e-172	62.17	Splicing factor, CC1-like	[more]
AT2G16940.3	4.5e-165	58.46	Splicing factor, CC1-like	[more]
AT2G16940.2	4.5e-165	57.47	Splicing factor, CC1-like	[more]
AT5G09880.1	5.4e-134	55.72	Splicing factor, CC1-like	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 500..578 e-value: 0.06 score: 22.5 coord: 313..385 e-value: 0.51 score: 17.2
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 210..282 e-value: 5.9E-16 score: 69.0 coord: 500..578 e-value: 4.1E-7 score: 39.6 coord: 313..385 e-value: 1.5E-23 score: 94.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 523..574 e-value: 3.4E-7 score: 30.0 coord: 314..383 e-value: 1.8E-19 score: 69.4 coord: 219..277 e-value: 2.3E-10 score: 40.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 499..582 score: 9.763249
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 209..286 score: 14.675204
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 312..389 score: 19.058443
IPR006509	Splicing factor, RBM39-like	TIGRFAM	TIGR01622	TIGR01622	coord: 83..591 e-value: 1.9E-157 score: 523.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 495..593 e-value: 1.8E-31 score: 110.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 149..293 e-value: 2.5E-25 score: 91.2 coord: 294..392 e-value: 2.0E-23 score: 85.1
IPR029123	Splicing factor RBM39, linker	PFAM	PF15519	RBM39linker	coord: 403..516 e-value: 3.1E-19 score: 69.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..208
None	No IPR available	PANTHER	PTHR48036	SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED	coord: 1..589
None	No IPR available	PANTHER	PTHR48036:SF5	CC1-LIKE SPLICING FACTOR	coord: 1..589
None	No IPR available	CDD	cd12285	RRM3_RBM39_like	coord: 498..581 e-value: 1.66306E-38 score: 134.594
None	No IPR available	CDD	cd12283	RRM1_RBM39_like	coord: 210..282 e-value: 2.85271E-43 score: 146.982
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 312..579
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 202..310

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C013338.1	MELO3C013338.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding