MELO3C013245 (gene) Melon (DHL92) v4

Overview


Name	MELO3C013245
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	40S ribosomal protein S11-like
Location	chr01: 14674684 .. 14676933 (-)
RNA-Seq Expression	MELO3C013245
Synteny	MELO3C013245

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAACACTCTGACCCTCAGGTTTAGGGTTTCTGTAATCAAGACTCCTTCGGCCGCCTGAGCAAACCACAAATCCTCCTCTCTTCACAATCCCTAATCATGGCGGAACAGGTTTCTATTCAATCTGAAAATCTACTTCTTTTCACGTCTATTCTGTCTGTTTCCATTTTATTAACTTTAACTTTCCATCTCCCAACTCTTCCTTCTTTTTCTACAGACCGAGAAGGCCTTTTTGAAGCAACCTAAAGTGTTTCTCTGGTAAACCAATTGAAAAGTTATTTATTTTATTTTATTTTTTTGCTTATTTGAATTTTCTTCTGTTTACCCTAATCCTTATTTTATTTCATGTTTATGATTATTGTTCTTTTTGGATATCAAAATAGCTCTAAAAAGACTGCAAAAGGGAAGAGACCTGGAAAGGGCGGGAACCGTTTCTGGAAGAGTATTGGATTAGGATTCAAGACCCCAAGAGATGCCATTGAAGGTTCTGTTTTTTTTTTTACAACTCCGATCACGTTGTGTTTGTTGGATTGTTAAAATGAATGTGTTTAGCCCTTTTAATTTTTGATTTAGCTTAGTATCCCGATCATTTTTAACCTGGCATGGAGCTTCGTTGTATTGTATTTGCATGCTTATTAGTGTTTAATTAATGCCTATAACACAATGAATTGGAGCTGCTTCTTCGTTGCTATAATGTCCGCAGGAATGCTTATTTAACCGCCGTTTGTTCTAATGCTCAGAGTATACAACTCCGTGATATAGAATATATTGGAAAAATATTATGAGCTGAAGGGATAGTTTGGCTGGGGATTTTATTACCTTTTGCTTAGAATGAGCATTTTTTCTGCATACATACAATGACTGTTCCTACTTGATGGATGGTTGAAGGAATCCGATAAATCAAAGACTTATGTTGATCGAATGATGCCTGTCTTTGTAGAGTCCACCAAATATATATCATCAGAATTAATCTTATAATAGCATTGCGTTCATGGAGAGATTAAGATTGAATACTGGAATCTAATGCCCCCATCCACTTCTGAGGCTTGGTCTCCTCACTTACCCTATGTACTGTGTTCACTTTTATTAAGGCCCGATATCTAGGCTTACATTGCAATCGTGTTGATTGAATAAGGATGCAATCCTGCAAAGGGAAATTTCTAAGCAATACGGCATACTCATTTACCATATGTATTGTATGCATCTTTATCTCCAAATTTCAAGCCCCTATACTTGGGCAATGCCTTACCGTTATATTTTTGAGTTGTTGTTGAATATTAGAATGCTATTTACTGACTGATTATTCCAATTCTACTGTATTCATGCAGGGACTTATATTGATAAGAAATGCCCCTTCGCTGGAACCGTCTCCATCAGGGGACGTATTTTAGCTGGAACATGTCACAGCGCTAAGATGGTCAGGACCATTATTGTAAGGCGGAACTACCTACATTATGTTAAGAAGTATCAGAGGTACTTTCCTGATCCGCCCACCTCCCATCAGAGCTGATTTTTTTTCTTCGTGGTTCTAATATGTTTTGTTTCTTCTTTTCCCCTTCAGGTATGAGAAAAGGCACTCAAACATTCCTGCCCACATATCTCCTTGCTTTCGTGTGAAGGAAGGTGATCATGTTATTATTGGCCAATGCAGGTACATGATTTGAGTGATTCTCTCCAATTCTTGTTTTTTTTGTTTCTTTGAAGAAAATTTGTTTAACATTTACTGTATGAACTTCAGGCCATTGTCGAAGACAGTTAGGTTCAATGTGTTGAAGGTCATTCCGGCTGGATCCTCGAGTCGTGGAAAGAAGGCTTTTGCTGGGATTTAAATTATGATGTAGGGGTTTCCGCTTTCAATACAAAAAGAAAAACAAGCAAGAAAGAACTTTTGAGAGTTGTTAGTAGGCCAATATTTGATGGAAGAGGGGTTTTGAAAGACTTAGCAGCAGTCTGGATTTTGATATGAATATGGACTGTTTTTTTATTGTGTTCTATTTGTTCTGATTTCTTGTCTAATTTGGGGTTTTGAAAGTACCAACTTCTCCTGGATCTCTATTAGGTAATTCTAATACATGTCAGTTTTATATTATGAGATTGTCTTTCCACTGCTTGTTTTCAGCATTTCATTTTTATTTTTCTTTCTACCTTGGAACAAGAATTATGTTTGATTGTTTGTGACTTGCTTAGACCCTTGATTCAATAAGGTAACCTTTAGAATTCATGTCATACCTGCTCTCTTTCAGTCGGTATGC

mRNA sequence

ATAACACTCTGACCCTCAGGTTTAGGGTTTCTGTAATCAAGACTCCTTCGGCCGCCTGAGCAAACCACAAATCCTCCTCTCTTCACAATCCCTAATCATGGCGGAACAGACCGAGAAGGCCTTTTTGAAGCAACCTAAAGTGTTTCTCTGCTCTAAAAAGACTGCAAAAGGGAAGAGACCTGGAAAGGGCGGGAACCGTTTCTGGAAGAGTATTGGATTAGGATTCAAGACCCCAAGAGATGCCATTGAAGGGACTTATATTGATAAGAAATGCCCCTTCGCTGGAACCGTCTCCATCAGGGGACGTATTTTAGCTGGAACATGTCACAGCGCTAAGATGGTCAGGACCATTATTGTAAGGCGGAACTACCTACATTATGTTAAGAAGTATCAGAGGTATGAGAAAAGGCACTCAAACATTCCTGCCCACATATCTCCTTGCTTTCGTGTGAAGGAAGGTGATCATGTTATTATTGGCCAATGCAGGCCATTGTCGAAGACAGTTAGGTTCAATGTGTTGAAGGTCATTCCGGCTGGATCCTCGAGTCGTGGAAAGAAGGCTTTTGCTGGGATTTAAATTATGATGTAGGGGTTTCCGCTTTCAATACAAAAAGAAAAACAAGCAAGAAAGAACTTTTGAGAGTTGTTAGTAGGCCAATATTTGATGGAAGAGGGGTTTTGAAAGACTTAGCAGCAGTCTGGATTTTGATATGAATATGGACTGTTTTTTTATTGTGTTCTATTTGTTCTGATTTCTTGTCTAATTTGGGGTTTTGAAAGTACCAACTTCTCCTGGATCTCTATTAGGTAATTCTAATACATGTCAGTTTTATATTATGAGATTGTCTTTCCACTGCTTGTTTTCAGCATTTCATTTTTATTTTTCTTTCTACCTTGGAACAAGAATTATGTTTGATTGTTTGTGACTTGCTTAGACCCTTGATTCAATAAGGTAACCTTTAGAATTCATGTCATACCTGCTCTCTTTCAGTCGGTATGC

Coding sequence (CDS)

ATGGCGGAACAGACCGAGAAGGCCTTTTTGAAGCAACCTAAAGTGTTTCTCTGCTCTAAAAAGACTGCAAAAGGGAAGAGACCTGGAAAGGGCGGGAACCGTTTCTGGAAGAGTATTGGATTAGGATTCAAGACCCCAAGAGATGCCATTGAAGGGACTTATATTGATAAGAAATGCCCCTTCGCTGGAACCGTCTCCATCAGGGGACGTATTTTAGCTGGAACATGTCACAGCGCTAAGATGGTCAGGACCATTATTGTAAGGCGGAACTACCTACATTATGTTAAGAAGTATCAGAGGTATGAGAAAAGGCACTCAAACATTCCTGCCCACATATCTCCTTGCTTTCGTGTGAAGGAAGGTGATCATGTTATTATTGGCCAATGCAGGCCATTGTCGAAGACAGTTAGGTTCAATGTGTTGAAGGTCATTCCGGCTGGATCCTCGAGTCGTGGAAAGAAGGCTTTTGCTGGGATTTAA

Protein sequence

MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCPFAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI

Homology

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BLAST of MELO3C013245 vs. NCBI nr
Match: XP_008447825.1 (PREDICTED: 40S ribosomal protein S11-like [Cucumis melo] >TYK23274.1 40S ribosomal protein S11-like [Cucumis melo var. makuwa])

HSP 1 Score: 326.6 bits (836), Expect = 1.2e-85
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 159

[Close]

BLAST of MELO3C013245 vs. NCBI nr
Match: XP_004153463.1 (40S ribosomal protein S11 [Cucumis sativus] >KGN43351.1 hypothetical protein Csa_020478 [Cucumis sativus])

HSP 1 Score: 322.4 bits (825), Expect = 2.2e-84
Identity = 156/159 (98.11%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKKTAKG +PGKGGNRFWK+IGLGFKTPRDAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKTAKGNKPGKGGNRFWKNIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 159

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BLAST of MELO3C013245 vs. NCBI nr
Match: XP_038887258.1 (40S ribosomal protein S11-like [Benincasa hispida])

HSP 1 Score: 321.6 bits (823), Expect = 3.7e-84
Identity = 156/159 (98.11%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKK  KGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKAGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F GTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 159

[Close]

BLAST of MELO3C013245 vs. NCBI nr
Match: XP_022952178.1 (40S ribosomal protein S11-like [Cucurbita moschata] >XP_022969280.1 40S ribosomal protein S11-like [Cucurbita maxima] >KAG7011817.1 40S ribosomal protein S11-3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 317.8 bits (813), Expect = 5.4e-83
Identity = 153/159 (96.23%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKK+ KGKRPGKGGNRFWKSIGLGFKTPR+A+EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCP 60

Query: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F GTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSS GKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSSGKKAFAGI 159

[Close]

BLAST of MELO3C013245 vs. NCBI nr
Match: KAG6572178.1 (Glutamate receptor 3.2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 317.8 bits (813), Expect = 5.4e-83
Identity = 153/159 (96.23%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1    MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
            MAEQTEKAFLKQPKVFLCSKK+ KGKRPGKGGNRFWKSIGLGFKTPR+A+EGTYIDKKCP
Sbjct: 1522 MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCP 1581

Query: 61   FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
            F GTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 1582 FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 1641

Query: 121  GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
            GDHVIIGQCRPLSKTVRFNVLKVIPAGSSS GKKAFAGI
Sbjct: 1642 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSSGKKAFAGI 1680

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BLAST of MELO3C013245 vs. ExPASy Swiss-Prot
Match: Q9M5M1 (40S ribosomal protein S11 OS=Euphorbia esula OX=3993 GN=RPS11 PE=2 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 9.0e-81
Identity = 145/159 (91.19%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKKT KGKRPGKGGNRFWKSIGLGFKTPR+AI+GTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLASKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIDGTYIDKKCP 60

Query: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F GTVSIRGRILAGTCHSAKM RTIIVRRNYLH++KKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSS   KKAF  I
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGVKKAFTAI 159

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BLAST of MELO3C013245 vs. ExPASy Swiss-Prot
Match: P25460 (40S ribosomal protein S11 OS=Zea mays OX=4577 GN=RPS11 PE=2 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.0e-80
Identity = 143/156 (91.67%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+ KGK+PGKGGNRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F GTVSIRGRI+AGTCHSAKM RTIIVRRNYLH+VKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAF 157
           GDHVIIGQCRPLSKTVRFNV+KVIPAGS++ GKKAF
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVVKVIPAGSAAAGKKAF 156

[Close]

BLAST of MELO3C013245 vs. ExPASy Swiss-Prot
Match: P17093 (40S ribosomal protein S11 OS=Glycine max OX=3847 GN=RPS11 PE=2 SV=2)

HSP 1 Score: 299.3 bits (765), Expect = 2.6e-80
Identity = 145/159 (91.19%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL +KKT KGKRPGKGGNRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSTKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F G VSIRGRILAGTCHSAKM RTIIVRRNYLH++KKYQRYEKRHSNIPAHISP FRVKE
Sbjct: 61  FTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSS  KKAF G+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159

[Close]

BLAST of MELO3C013245 vs. ExPASy Swiss-Prot
Match: P16181 (40S ribosomal protein S11-1 OS=Arabidopsis thaliana OX=3702 GN=RPS11A PE=2 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 2.9e-79
Identity = 142/160 (88.75%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+ KGKRPGKGGNRFWK+IGLGFKTPR+AI+G Y+DKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCP 60

Query: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F GTVSIRGRILAGTCHSAKM RTIIVRR+YLH+VKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSR-GKKAFAGI 160
           GDH+IIGQCRPLSKTVRFNVLKVIPAGSSS  GKKAF G+
Sbjct: 121 GDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM 160

[Close]

BLAST of MELO3C013245 vs. ExPASy Swiss-Prot
Match: P42733 (40S ribosomal protein S11-3 OS=Arabidopsis thaliana OX=3702 GN=RPS11C PE=2 SV=2)

HSP 1 Score: 295.8 bits (756), Expect = 2.9e-79
Identity = 141/159 (88.68%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SK + KGKRPGKGGNRFWK+IGLGFKTPR+AI+G YID KCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCP 60

Query: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F GTVSIRGRILAGTCHSAKM RTIIVRRNYLH+VKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAG+S+ GKKAF G+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTGV 159

[Close]

BLAST of MELO3C013245 vs. ExPASy TrEMBL
Match: A0A5D3DI18 (40S ribosomal protein S11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003300 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 5.6e-86
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 159

[Close]

BLAST of MELO3C013245 vs. ExPASy TrEMBL
Match: A0A1S3BHR3 (40S ribosomal protein S11-like OS=Cucumis melo OX=3656 GN=LOC103490202 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 5.6e-86
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 159

[Close]

BLAST of MELO3C013245 vs. ExPASy TrEMBL
Match: A0A0A0K691 (Ribosomal_S17_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G025720 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.1e-84
Identity = 156/159 (98.11%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKKTAKG +PGKGGNRFWK+IGLGFKTPRDAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKTAKGNKPGKGGNRFWKNIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 159

[Close]

BLAST of MELO3C013245 vs. ExPASy TrEMBL
Match: A0A6J1HZI1 (40S ribosomal protein S11-like OS=Cucurbita maxima OX=3661 GN=LOC111468334 PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.6e-83
Identity = 153/159 (96.23%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKK+ KGKRPGKGGNRFWKSIGLGFKTPR+A+EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCP 60

Query: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F GTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSS GKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSSGKKAFAGI 159

[Close]

BLAST of MELO3C013245 vs. ExPASy TrEMBL
Match: A0A6J1GJT3 (40S ribosomal protein S11-like OS=Cucurbita moschata OX=3662 GN=LOC111454930 PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.6e-83
Identity = 153/159 (96.23%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKK+ KGKRPGKGGNRFWKSIGLGFKTPR+A+EGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCP 60

Query: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F GTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSS GKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSSGKKAFAGI 159

[Close]

BLAST of MELO3C013245 vs. TAIR 10
Match: AT3G48930.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 295.8 bits (756), Expect = 2.1e-80
Identity = 142/160 (88.75%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+ KGKRPGKGGNRFWK+IGLGFKTPR+AI+G Y+DKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCP 60

Query: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F GTVSIRGRILAGTCHSAKM RTIIVRR+YLH+VKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSR-GKKAFAGI 160
           GDH+IIGQCRPLSKTVRFNVLKVIPAGSSS  GKKAF G+
Sbjct: 121 GDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM 160

[Close]

BLAST of MELO3C013245 vs. TAIR 10
Match: AT5G23740.1 (ribosomal protein S11-beta )

HSP 1 Score: 295.8 bits (756), Expect = 2.1e-80
Identity = 141/159 (88.68%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SK + KGKRPGKGGNRFWK+IGLGFKTPR+AI+G YID KCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCP 60

Query: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F GTVSIRGRILAGTCHSAKM RTIIVRRNYLH+VKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAG+S+ GKKAF G+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTGV 159

[Close]

BLAST of MELO3C013245 vs. TAIR 10
Match: AT4G30800.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 294.3 bits (752), Expect = 6.0e-80
Identity = 141/159 (88.68%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+ KGKRPGKGGNRFWK+IGLGFKTPR+AIEGTYID+KCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIEGTYIDQKCP 60

Query: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F GTVSIRGRIL+GTCHSAKM RTIIVRR+YLH+VKKY+RYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GD V IGQCRPLSKTVRFNVLKVIPAGSSS GKKAF G+
Sbjct: 121 GDRVTIGQCRPLSKTVRFNVLKVIPAGSSSIGKKAFTGM 159

The following BLAST results are available for this feature:

BLAST of MELO3C013245 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447825.1	1.2e-85	100.00	PREDICTED: 40S ribosomal protein S11-like [Cucumis melo] >TYK23274.1 40S ribosom...	[more]
XP_004153463.1	2.2e-84	98.11	40S ribosomal protein S11 [Cucumis sativus] >KGN43351.1 hypothetical protein Csa...	[more]
XP_038887258.1	3.7e-84	98.11	40S ribosomal protein S11-like [Benincasa hispida]	[more]
XP_022952178.1	5.4e-83	96.23	40S ribosomal protein S11-like [Cucurbita moschata] >XP_022969280.1 40S ribosoma...	[more]
KAG6572178.1	5.4e-83	96.23	Glutamate receptor 3.2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MELO3C013245 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M5M1	9.0e-81	91.19	40S ribosomal protein S11 OS=Euphorbia esula OX=3993 GN=RPS11 PE=2 SV=1	[more]
P25460	2.0e-80	91.67	40S ribosomal protein S11 OS=Zea mays OX=4577 GN=RPS11 PE=2 SV=1	[more]
P17093	2.6e-80	91.19	40S ribosomal protein S11 OS=Glycine max OX=3847 GN=RPS11 PE=2 SV=2	[more]
P16181	2.9e-79	88.75	40S ribosomal protein S11-1 OS=Arabidopsis thaliana OX=3702 GN=RPS11A PE=2 SV=1	[more]
P42733	2.9e-79	88.68	40S ribosomal protein S11-3 OS=Arabidopsis thaliana OX=3702 GN=RPS11C PE=2 SV=2	[more]

BLAST of MELO3C013245 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DI18	5.6e-86	100.00	40S ribosomal protein S11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BHR3	5.6e-86	100.00	40S ribosomal protein S11-like OS=Cucumis melo OX=3656 GN=LOC103490202 PE=3 SV=1	[more]
A0A0A0K691	1.1e-84	98.11	Ribosomal_S17_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G02...	[more]
A0A6J1HZI1	2.6e-83	96.23	40S ribosomal protein S11-like OS=Cucurbita maxima OX=3661 GN=LOC111468334 PE=3 ...	[more]
A0A6J1GJT3	2.6e-83	96.23	40S ribosomal protein S11-like OS=Cucurbita moschata OX=3662 GN=LOC111454930 PE=...	[more]

BLAST of MELO3C013245 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48930.1	2.1e-80	88.75	Nucleic acid-binding, OB-fold-like protein	[more]
AT5G23740.1	2.1e-80	88.68	ribosomal protein S11-beta	[more]
AT4G30800.1	6.0e-80	88.68	Nucleic acid-binding, OB-fold-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000266	Ribosomal protein S17/S11	PRINTS	PR00973	RIBOSOMALS17	coord: 131..138 score: 73.25 coord: 121..131 score: 60.91 coord: 88..111 score: 37.33
IPR000266	Ribosomal protein S17/S11	PFAM	PF00366	Ribosomal_S17	coord: 74..142 e-value: 7.1E-26 score: 90.1
IPR000266	Ribosomal protein S17/S11	PANTHER	PTHR10744	40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER	coord: 1..158
IPR028333	Ribosomal protein S17, archaeal/eukaryotic	TIGRFAM	TIGR03630	TIGR03630	coord: 55..143 e-value: 7.5E-34 score: 113.8
IPR032440	40S ribosomal protein S11, N-terminal	PFAM	PF16205	Ribosomal_S17_N	coord: 4..72 e-value: 2.0E-30 score: 105.0
None	No IPR available	GENE3D	2.40.50.1000		coord: 1..158 e-value: 1.9E-82 score: 276.9
None	No IPR available	PANTHER	PTHR10744:SF32	OS04G0502300 PROTEIN	coord: 1..158
IPR019979	Ribosomal protein S17, conserved site	PROSITE	PS00056	RIBOSOMAL_S17	coord: 121..133
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 68..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C013245.1	MELO3C013245.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome