MELO3C013213 (gene) Melon (DHL92) v4

Overview
NameMELO3C013213
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr01: 13924872 .. 13925297 (-)
RNA-Seq ExpressionMELO3C013213
SyntenyMELO3C013213
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCAAGAAGTGGAAAATGTTGGGAAGATTAGTGAAGCTAGGAGAATAGAAGCACAAGGAGGAATAATTATTCGTTTAACTCAAGTAATTAATGACTTGACAAATCTGTATCCTATCTAATAGCTATTAGATAGGATAGAGGTAGCTTTAAGGAATCCTCGCCAAGGGGAAGTCTGGAACAAAGGAGTTGAAAATGAAGAGGATGAGGATAACGAAATCCTTTTAGCTGGACAAAATCCAAGAGGGAAAAGAGTGTTAGGCCAAGGTAGAAGAAGAGGAAGAAGAGAGGGAAGGGGCATGTTACCTGAAAGAAGGGTTGAAAGGGAGTATGAAAATGAAAGAAGAGAAGAAAAATGGATAGGAGGAGTGAAGCTCATAATTCCTACATTTGATGGGACAACAGATCTGGAGGAATATTTGTAA

mRNA sequence

ATGAATCAAGAAGTGGAAAATGTTGGGAAGATTAGTGAAGCTAGGAGAATAGAAGCACAAGGAGGAATAATTATTCGTTTAACTCAACTATTAGATAGGATAGAGGTAGCTTTAAGGAATCCTCGCCAAGGGGAAGTCTGGAACAAAGGAGTTGAAAATGAAGAGGATGAGGATAACGAAATCCTTTTAGCTGGACAAAATCCAAGAGGGAAAAGAGTGTTAGGCCAAGGTAGAAGAAGAGGAAGAAGAGAGGGAAGGGGCATGTTACCTGAAAGAAGGGTTGAAAGGGAGTATGAAAATGAAAGAAGAGAAGAAAAATGGATAGGAGGAGTGAAGCTCATAATTCCTACATTTGATGGGACAACAGATCTGGAGGAATATTTGTAA

Coding sequence (CDS)

ATGAATCAAGAAGTGGAAAATGTTGGGAAGATTAGTGAAGCTAGGAGAATAGAAGCACAAGGAGGAATAATTATTCGTTTAACTCAACTATTAGATAGGATAGAGGTAGCTTTAAGGAATCCTCGCCAAGGGGAAGTCTGGAACAAAGGAGTTGAAAATGAAGAGGATGAGGATAACGAAATCCTTTTAGCTGGACAAAATCCAAGAGGGAAAAGAGTGTTAGGCCAAGGTAGAAGAAGAGGAAGAAGAGAGGGAAGGGGCATGTTACCTGAAAGAAGGGTTGAAAGGGAGTATGAAAATGAAAGAAGAGAAGAAAAATGGATAGGAGGAGTGAAGCTCATAATTCCTACATTTGATGGGACAACAGATCTGGAGGAATATTTGTAA

Protein sequence

MNQEVENVGKISEARRIEAQGGIIIRLTQLLDRIEVALRNPRQGEVWNKGVENEEDEDNEILLAGQNPRGKRVLGQGRRRGRREGRGMLPERRVEREYENERREEKWIGGVKLIIPTFDGTTDLEEYL
Homology
BLAST of MELO3C013213 vs. NCBI nr
Match: KAE8646857.1 (hypothetical protein Csa_020829, partial [Cucumis sativus])

HSP 1 Score: 182.6 bits (462), Expect = 2.2e-42
Identity = 101/135 (74.81%), Postives = 112/135 (82.96%), Query Frame = 0

Query: 1   MNQEVENVGKISEARRIEAQGGIIIRLTQL-------LDRIEVALRNPRQGEVWNKGVEN 60
           MNQ+ +N G+ISEARRIEAQGG I+RLTQ+       LDRIEVALRN  QG+V N+GVEN
Sbjct: 1   MNQKTKNSGEISEARRIEAQGGAIVRLTQVINDLTDRLDRIEVALRNRHQGQVLNEGVEN 60

Query: 61  EEDEDNEILLAGQNPRGKRVLGQGRRRGRREGRGMLPERRVEREYENERREEKWIGGVKL 120
           EEDEDNE LLA QN RG+RVLGQGRRR RREGR MLPERRVEREY+NERREE+ IGGVKL
Sbjct: 61  EEDEDNETLLAIQNLRGRRVLGQGRRRERREGRDMLPERRVEREYQNERREERGIGGVKL 120

Query: 121 IIPTFDGTTDLEEYL 129
            IPTF  TT+ EEYL
Sbjct: 121 KIPTFHETTNPEEYL 135

BLAST of MELO3C013213 vs. NCBI nr
Match: KGN47250.1 (hypothetical protein Csa_016986 [Cucumis sativus])

HSP 1 Score: 146.7 bits (369), Expect = 1.3e-31
Identity = 80/111 (72.07%), Postives = 93/111 (83.78%), Query Frame = 0

Query: 1   MNQEVENVGKISEARRIEAQGGIIIRLTQL-------LDRIEVALRNPRQGEVWNKGVEN 60
           MN++ +N GKISEA+RIEAQGG I+RLTQ+       LDR+EVALRN  QGEV N+GVEN
Sbjct: 1   MNKKAKNDGKISEAKRIEAQGGAIVRLTQVINDLTNRLDRMEVALRNHHQGEVLNEGVEN 60

Query: 61  EEDEDNEILLAGQNPRGKRVLGQGRRRGRREGRGMLPERRVEREYENERRE 105
           EEDEDNE  LAGQNPRG+RVLGQGRRR RR+ RGMLPERRVE E++NERR+
Sbjct: 61  EEDEDNETFLAGQNPRGRRVLGQGRRRERRDVRGMLPERRVEVEHQNERRD 111

BLAST of MELO3C013213 vs. NCBI nr
Match: KAA0053330.1 (hypothetical protein E6C27_scaffold27G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 140.2 bits (352), Expect = 1.2e-29
Identity = 73/95 (76.84%), Postives = 81/95 (85.26%), Query Frame = 0

Query: 34  IEVALRNPRQGEVWNKGVENEEDEDNEILLAGQNPRGKRVLGQGRRRGRREGRGMLPERR 93
           ++VALRN  QGEV N+GVEN+EDEDNE +L GQNP+G+RVLGQ RRR RREG GMLPERR
Sbjct: 1   MKVALRNHHQGEVLNEGVENKEDEDNETILVGQNPKGRRVLGQDRRRERREGMGMLPERR 60

Query: 94  VEREYENERREEKWIGGVKLIIPTFDGTTDLEEYL 129
           VEREYENERRE K +GGVKL I TF  TTDLEEYL
Sbjct: 61  VEREYENERREGKGMGGVKLTILTFHRTTDLEEYL 95

BLAST of MELO3C013213 vs. NCBI nr
Match: XP_038888883.1 (uncharacterized protein LOC120078660 [Benincasa hispida])

HSP 1 Score: 122.5 bits (306), Expect = 2.7e-24
Identity = 74/125 (59.20%), Postives = 89/125 (71.20%), Query Frame = 0

Query: 12  SEARRIEAQGGIIIRLTQL-------LDRIEVALRNPRQGEV-WNKGVENEEDEDNEILL 71
           SEAR  EAQ G+I RLT++       ++R+EVALRNP+QGE+  N+  +NEED+DNE LL
Sbjct: 12  SEARYREAQVGVITRLTKVVKSLIDRVERMEVALRNPQQGEMGCNEEFDNEEDDDNETLL 71

Query: 72  AGQNPRGKRVLGQGRRRGRREGRGMLPERRVEREYENERREEKWIGGVKLIIPTFDGTTD 129
            GQN RG  VLG+G  RGRR  R +L  R VEREY+NER EE  IGGVKL IPTF GT D
Sbjct: 72  VGQNSRGMGVLGRG--RGRRRERNILQPRMVEREYQNERGEETGIGGVKLAIPTFHGTMD 131

BLAST of MELO3C013213 vs. NCBI nr
Match: XP_023534142.1 (uncharacterized protein LOC111795765 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 116.7 bits (291), Expect = 1.5e-22
Identity = 75/136 (55.15%), Postives = 93/136 (68.38%), Query Frame = 0

Query: 1   MNQEVENVGKISEARRIEAQGGIIIRLTQL-------LDRIEVALRNPRQGEV-WNKGVE 60
           MNQ+  N G+I+EAR  EAQ G I RL Q+       ++RIE+AL N +  EV  N+GVE
Sbjct: 1   MNQDGGNGGEINEARWREAQVGTITRLNQVISTLTDRMERIEIALGNLQGREVLLNEGVE 60

Query: 61  NEEDEDNEILLAGQNPRGKRVLGQGRRRGRREGRGMLPERRVEREYENERREEKWIGGVK 120
           NEED DN  LLAG +PRG R +G+GR R RR GR +L  +R+EREY+ ER  EK + GVK
Sbjct: 61  NEED-DNVTLLAGHSPRGGRDVGRGRGRVRRRGREILAPKRIEREYQYERENEKGVWGVK 120

Query: 121 LIIPTFDGTTDLEEYL 129
           L IPTF G +D EEYL
Sbjct: 121 LKIPTFYGRSDPEEYL 135

BLAST of MELO3C013213 vs. ExPASy TrEMBL
Match: A0A0A0KC00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G235580 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 6.4e-32
Identity = 80/111 (72.07%), Postives = 93/111 (83.78%), Query Frame = 0

Query: 1   MNQEVENVGKISEARRIEAQGGIIIRLTQL-------LDRIEVALRNPRQGEVWNKGVEN 60
           MN++ +N GKISEA+RIEAQGG I+RLTQ+       LDR+EVALRN  QGEV N+GVEN
Sbjct: 1   MNKKAKNDGKISEAKRIEAQGGAIVRLTQVINDLTNRLDRMEVALRNHHQGEVLNEGVEN 60

Query: 61  EEDEDNEILLAGQNPRGKRVLGQGRRRGRREGRGMLPERRVEREYENERRE 105
           EEDEDNE  LAGQNPRG+RVLGQGRRR RR+ RGMLPERRVE E++NERR+
Sbjct: 61  EEDEDNETFLAGQNPRGRRVLGQGRRRERRDVRGMLPERRVEVEHQNERRD 111

BLAST of MELO3C013213 vs. ExPASy TrEMBL
Match: A0A5A7UDQ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27G00150 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 6.0e-30
Identity = 73/95 (76.84%), Postives = 81/95 (85.26%), Query Frame = 0

Query: 34  IEVALRNPRQGEVWNKGVENEEDEDNEILLAGQNPRGKRVLGQGRRRGRREGRGMLPERR 93
           ++VALRN  QGEV N+GVEN+EDEDNE +L GQNP+G+RVLGQ RRR RREG GMLPERR
Sbjct: 1   MKVALRNHHQGEVLNEGVENKEDEDNETILVGQNPKGRRVLGQDRRRERREGMGMLPERR 60

Query: 94  VEREYENERREEKWIGGVKLIIPTFDGTTDLEEYL 129
           VEREYENERRE K +GGVKL I TF  TTDLEEYL
Sbjct: 61  VEREYENERREGKGMGGVKLTILTFHRTTDLEEYL 95

BLAST of MELO3C013213 vs. ExPASy TrEMBL
Match: A0A0A0L0S3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G114220 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 7.6e-17
Identity = 53/80 (66.25%), Postives = 62/80 (77.50%), Query Frame = 0

Query: 1  MNQEVENVGKISEARRIEAQGGIIIRLTQL-------LDRIEVALRNPRQGEVWNKGVEN 60
          MNQ+ +N G+ISEARRIEAQGG I+RLTQ+       LDR+ VALRN  QGEV N+GVEN
Sbjct: 1  MNQKAKNDGEISEARRIEAQGGAIVRLTQVINDLTDRLDRMNVALRNRHQGEVLNEGVEN 60

Query: 61 EEDEDNEILLAGQNPRGKRV 74
          E+DEDNE LLA QNP  +RV
Sbjct: 61 EKDEDNETLLARQNPTERRV 80

BLAST of MELO3C013213 vs. ExPASy TrEMBL
Match: A0A6J1EHL9 (uncharacterized protein LOC111432615 OS=Cucurbita moschata OX=3662 GN=LOC111432615 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.7e-08
Identity = 53/115 (46.09%), Postives = 72/115 (62.61%), Query Frame = 0

Query: 1   MNQEVENVGKISEARRIEAQGGIIIRLTQL-------LDRIEVALRNPRQGEV-WNKGVE 60
           MNQ+  N G+I+EAR  EAQ G I RL Q+       ++RI++AL N +  EV  N+GVE
Sbjct: 1   MNQDEGNGGEINEARWREAQVGTITRLNQVISTLTDRMERIQIALGNLQGREVLLNEGVE 60

Query: 61  NEEDEDNEILLAGQNPRGKRVLGQGRRRGRREGRGMLPERRVEREYE-NERREEK 107
           NEED DN  LLAG +PRG R +G+GR R RR    +  E ++E  ++ N   EE+
Sbjct: 61  NEED-DNVTLLAGHSPRGGRDVGRGRGRVRRREEYLQYESKIEHVFDCNNFSEER 114

BLAST of MELO3C013213 vs. ExPASy TrEMBL
Match: A0A6J1ETN1 (uncharacterized protein LOC111436410 OS=Cucurbita moschata OX=3662 GN=LOC111436410 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 8.8e-05
Identity = 41/80 (51.25%), Postives = 51/80 (63.75%), Query Frame = 0

Query: 1  MNQEVENVGKISEARRIEAQGG-------IIIRLTQLLDRIEVALRNPRQGEV-WNKGVE 60
          MNQ+  N  +I+EAR  EAQ G       +I  LT  ++RIE+AL N +  EV  N+GVE
Sbjct: 1  MNQDGGNGREINEARWREAQVGTITCLNQVISTLTDRMERIEIALGNLQGREVLLNEGVE 60

Query: 61 NEEDEDNEILLAGQNPRGKR 73
          NEED DN  LLAG +PRG R
Sbjct: 61 NEED-DNVTLLAGHSPRGGR 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8646857.12.2e-4274.81hypothetical protein Csa_020829, partial [Cucumis sativus][more]
KGN47250.11.3e-3172.07hypothetical protein Csa_016986 [Cucumis sativus][more]
KAA0053330.11.2e-2976.84hypothetical protein E6C27_scaffold27G00150 [Cucumis melo var. makuwa][more]
XP_038888883.12.7e-2459.20uncharacterized protein LOC120078660 [Benincasa hispida][more]
XP_023534142.11.5e-2255.15uncharacterized protein LOC111795765 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KC006.4e-3272.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G235580 PE=4 SV=1[more]
A0A5A7UDQ96.0e-3076.84Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0L0S37.6e-1766.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G114220 PE=4 SV=1[more]
A0A6J1EHL91.7e-0846.09uncharacterized protein LOC111432615 OS=Cucurbita moschata OX=3662 GN=LOC1114326... [more]
A0A6J1ETN18.8e-0551.25uncharacterized protein LOC111436410 OS=Cucurbita moschata OX=3662 GN=LOC1114364... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013213.1MELO3C013213.1mRNA