MELO3C012806 (gene) Melon (DHL92) v4

Overview


Name	MELO3C012806
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Polyprotein
Location	chr12: 3432540 .. 3433042 (-)
RNA-Seq Expression	MELO3C012806
Synteny	MELO3C012806

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTTCTAAACTACTCTCTAAGCTCTCTCCTCACTCTCCCGCAATCATCGACGCTACCGCTTCCTCTTCTTACTCTTCTTCATCGCCTTCGAATCCGAGATCCAAAAATGATCTTTCAACAGCTCTTGCCGAGCATAATTCAGCCGAAGCCCATTTGGCTCAGGTTGAAAACCGACTCAAAAATTGGTCTATTCCAAAACTAGAGGCCAATCAAGTGTACAAATCAACACCTTCAATTTTTCTCAGCAGGACGTTATAGTCATCACTGAAGAAAACGTAGCAATGAAAGATGAGTTCACTGCTATCAAACTCTTACCTGAAGAGACTCTCTTCAAAGTCAGAGACAGGTTCAAGTACCTTCACATAGGATGCGTTCAAGTTGCCTTGAAACCGCTCTTTAGAGAAGGGTTAGATGTTCCTGTCTACCTTGCTCTAAGAGACAAGAGGCATCTCAGATTCACTCCCTCTCTATTAGGGATTGTCCAATCAAACCTGGAACAA

mRNA sequence

ATGCTTTCTAAACTACTCTCTAAGCTCTCTCCTCACTCTCCCGCAATCATCGACGCTACCGCTTCCTCTTCTTACTCTTCTTCATCGCCTTCGAATCCGAGATCCAAAAATGATCTTTCAACAGCTCTTGCCGAGCATAATTCAGCCGAAGCCCATTTGGCTCAGGTTGAAAACCGACTCAAAAATTGGTCTATTCCAAAACTAGAGGCCAATCAAGTGTACAAATCAACACCTTCAATTTTTCTCAGCAGGACGTTATAGTCATCACTGAAGAAAACGTAGCAATGAAAGATGAGTTCACTGCTATCAAACTCTTACCTGAAGAGACTCTCTTCAAAGTCAGAGACAGGTTCAAGTACCTTCACATAGGATGCGTTCAAGTTGCCTTGAAACCGCTCTTTAGAGAAGGGTTAGATGTTCCTGTCTACCTTGCTCTAAGAGACAAGAGGCATCTCAGATTCACTCCCTCTCTATTAGGGATTGTCCAATCAAACCTGGAACAA

Coding sequence (CDS)

ATGCTTTCTAAACTACTCTCTAAGCTCTCTCCTCACTCTCCCGCAATCATCGACGCTACCGCTTCCTCTTCTTACTCTTCTTCATCGCCTTCGAATCCGAGATCCAAAAATGATCTTTCAACAGCTCTTGCCGAGCATAATTCAGCCGAAGCCCATTTGGCTCAGGTTGAAAACCGACTCAAAAATTGGTCTATTCCAAAACTAGAGGCCAATCAAGTGTACAAATCAACACCTTCAATTTTTCTCAGCAGGACGTTATAG

Protein sequence

MLSKLLSKLSPHSPAIIDATASSSYSSSSPSNPRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKSTPSIFLSRTL

Homology

[Close]

BLAST of MELO3C012806 vs. NCBI nr
Match: KAA0059217.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 135.6 bits (340), Expect = 2.1e-28
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 1  MLSKLLSKLSPHSPAIIDATASSSYSSSSPSNPRSKNDLSTALAEHNSAEAHLAQVENRL 60
          MLSKLLSKLSPHSPAIIDATASSSYSSSSPSN RSKNDLSTALAEHNSAEAHLAQVENRL
Sbjct: 1  MLSKLLSKLSPHSPAIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRL 60

Query: 61 KNWSIPKLEANQVYK 76
          KNWSIPKLEANQVYK
Sbjct: 61 KNWSIPKLEANQVYK 75

[Close]

BLAST of MELO3C012806 vs. NCBI nr
Match: TYJ97599.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 135.6 bits (340), Expect = 2.1e-28
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 1  MLSKLLSKLSPHSPAIIDATASSSYSSSSPSNPRSKNDLSTALAEHNSAEAHLAQVENRL 60
          MLSKLLSKLSPHSPAIIDATASSSYSSSSPSN RSKNDLSTALAEHNSAEAHLAQVENRL
Sbjct: 1  MLSKLLSKLSPHSPAIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRL 60

Query: 61 KNWSIPKLEANQVYK 76
          KNWSIPKLEANQVYK
Sbjct: 61 KNWSIPKLEANQVYK 75

[Close]

BLAST of MELO3C012806 vs. NCBI nr
Match: KAA0056776.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 135.6 bits (340), Expect = 2.1e-28
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 1  MLSKLLSKLSPHSPAIIDATASSSYSSSSPSNPRSKNDLSTALAEHNSAEAHLAQVENRL 60
          MLSKLLSKLSPHSPAIIDATASSSYSSSSPSN RSKNDLSTALAEHNSAEAHLAQVENRL
Sbjct: 1  MLSKLLSKLSPHSPAIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRL 60

Query: 61 KNWSIPKLEANQVYK 76
          KNWSIPKLEANQVYK
Sbjct: 61 KNWSIPKLEANQVYK 75

[Close]

BLAST of MELO3C012806 vs. NCBI nr
Match: KAA0037875.1 (polyprotein [Cucumis melo var. makuwa] >TYK16867.1 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 134.0 bits (336), Expect = 6.0e-28
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MLSKLLSKLSPHSPAIIDATASSSYSSSSPSNPRSKNDLSTALAEHNSAEAHLAQVENRL 60
          MLSKLLSKLSPHSP IIDATASSSYSSSSPSN RSKNDLSTALAEHNSAEAHLAQVENRL
Sbjct: 1  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRL 60

Query: 61 KNWSIPKLEANQVYK 76
          KNWSIPKLEANQVYK
Sbjct: 61 KNWSIPKLEANQVYK 75

[Close]

BLAST of MELO3C012806 vs. NCBI nr
Match: TYK04698.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 117.5 bits (293), Expect = 5.8e-23
Identity = 64/75 (85.33%), Postives = 68/75 (90.67%), Query Frame = 0


Query: 1  MLSKLLSKLSPHSPAIIDATASSSYSSSSPSNPRSKNDLSTALAEHNSAEAHLAQVENRL 60
          MLSKLLSKLSPHSP IIDAT SSSYSSSS SN R ++DLS ALA+HN+ EAHLAQVENRL
Sbjct: 1  MLSKLLSKLSPHSPTIIDATVSSSYSSSSSSNLRPQDDLSMALAKHNTTEAHLAQVENRL 60

Query: 61 KNWSIPKLEANQVYK 76
          KNWSIPKLEANQVYK
Sbjct: 61 KNWSIPKLEANQVYK 75

[Close]

BLAST of MELO3C012806 vs. ExPASy TrEMBL
Match: A0A5D3BEY3 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00300 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.0e-28
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 1  MLSKLLSKLSPHSPAIIDATASSSYSSSSPSNPRSKNDLSTALAEHNSAEAHLAQVENRL 60
          MLSKLLSKLSPHSPAIIDATASSSYSSSSPSN RSKNDLSTALAEHNSAEAHLAQVENRL
Sbjct: 1  MLSKLLSKLSPHSPAIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRL 60

Query: 61 KNWSIPKLEANQVYK 76
          KNWSIPKLEANQVYK
Sbjct: 61 KNWSIPKLEANQVYK 75

[Close]

BLAST of MELO3C012806 vs. ExPASy TrEMBL
Match: A0A5A7UX67 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001460 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.0e-28
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 1  MLSKLLSKLSPHSPAIIDATASSSYSSSSPSNPRSKNDLSTALAEHNSAEAHLAQVENRL 60
          MLSKLLSKLSPHSPAIIDATASSSYSSSSPSN RSKNDLSTALAEHNSAEAHLAQVENRL
Sbjct: 1  MLSKLLSKLSPHSPAIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRL 60

Query: 61 KNWSIPKLEANQVYK 76
          KNWSIPKLEANQVYK
Sbjct: 61 KNWSIPKLEANQVYK 75

[Close]

BLAST of MELO3C012806 vs. ExPASy TrEMBL
Match: A0A5A7UR29 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00660 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.0e-28
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 1  MLSKLLSKLSPHSPAIIDATASSSYSSSSPSNPRSKNDLSTALAEHNSAEAHLAQVENRL 60
          MLSKLLSKLSPHSPAIIDATASSSYSSSSPSN RSKNDLSTALAEHNSAEAHLAQVENRL
Sbjct: 1  MLSKLLSKLSPHSPAIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRL 60

Query: 61 KNWSIPKLEANQVYK 76
          KNWSIPKLEANQVYK
Sbjct: 61 KNWSIPKLEANQVYK 75

[Close]

BLAST of MELO3C012806 vs. ExPASy TrEMBL
Match: A0A5A7T8S7 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22487G00010 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.9e-28
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MLSKLLSKLSPHSPAIIDATASSSYSSSSPSNPRSKNDLSTALAEHNSAEAHLAQVENRL 60
          MLSKLLSKLSPHSP IIDATASSSYSSSSPSN RSKNDLSTALAEHNSAEAHLAQVENRL
Sbjct: 1  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRL 60

Query: 61 KNWSIPKLEANQVYK 76
          KNWSIPKLEANQVYK
Sbjct: 61 KNWSIPKLEANQVYK 75

[Close]

BLAST of MELO3C012806 vs. ExPASy TrEMBL
Match: A0A5D3C0A5 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold676G00190 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-23
Identity = 64/75 (85.33%), Postives = 68/75 (90.67%), Query Frame = 0


Query: 1  MLSKLLSKLSPHSPAIIDATASSSYSSSSPSNPRSKNDLSTALAEHNSAEAHLAQVENRL 60
          MLSKLLSKLSPHSP IIDAT SSSYSSSS SN R ++DLS ALA+HN+ EAHLAQVENRL
Sbjct: 1  MLSKLLSKLSPHSPTIIDATVSSSYSSSSSSNLRPQDDLSMALAKHNTTEAHLAQVENRL 60

Query: 61 KNWSIPKLEANQVYK 76
          KNWSIPKLEANQVYK
Sbjct: 61 KNWSIPKLEANQVYK 75

The following BLAST results are available for this feature:

BLAST of MELO3C012806 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C012806 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0059217.1	2.1e-28	98.67	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
TYJ97599.1	2.1e-28	98.67	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0056776.1	2.1e-28	98.67	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0037875.1	6.0e-28	97.33	polyprotein [Cucumis melo var. makuwa] >TYK16867.1 polyprotein [Cucumis melo var...	[more]
TYK04698.1	5.8e-23	85.33	polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C012806 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BEY3	1.0e-28	98.67	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold69...	[more]
A0A5A7UX67	1.0e-28	98.67	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7UR29	1.0e-28	98.67	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48...	[more]
A0A5A7T8S7	2.9e-28	97.33	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22487G00010 ...	[more]
A0A5D3C0A5	2.8e-23	85.33	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold676G00190 PE...	[more]

BLAST of MELO3C012806 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 39..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..44

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012806.1	MELO3C012806.1	mRNA