MELO3C012788 (gene) Melon (DHL92) v4

Overview


Name	MELO3C012788
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Transcription initiation factor IIF subunit alpha
Location	chr04: 11600333 .. 11606049 (+)
RNA-Seq Expression	MELO3C012788
Synteny	MELO3C012788

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGCTCTCTCCCCTTGATCTCAGCTTTTCTCACCTCCACGTCGCCACCACCTTCTCCGCCCTATCGCTTAGCCGCCTCTGTCGTGCTCCGCCCTCTTTACGCCTGCCGTCACCACCAGCAGAGGTAAAATCTCTCTCTCCCTTTTCGGTTTCTCTCTCTCTCTCTCTCACTCTCACCCCTGCTCCACCGCGGTCCATCGCTCGACCTCTATCGTTCTCGACAACTTCACCCACTGCCGGATCTGTGACGACGACACGTGATTAGACAGCAAACATCTACTTGTTCATCGCTTTTAACGGCTCTTGCGAACGAAAAGCCTTGCAAATAGTTTCGAATTAGATGGTCTCACTTGTTAGGGTTTAGCACAATATATGTGGAGGGTCGTTGTTGCTTAGTGACTGCCTTAGCAACCAAACGTAGGAGAATCAGTTGTCTGGTGAGAATAAAAAAGCTGTCAAATATTTATAGATATGAAAATATGGGATTCTGTGGTGATTTGTATTTTTGTTTTTAGGTATTGTAGATTTTTGTGGCTGAATTAAGGGGTGTGAGATGTCGTTCGATTTGCTCCTGAAGCCATCGTGCAGTGGATGTGGATCCACGACGGAGTTGTATGGGAGCAATTGCAAGCACATGACATTGTGTTTGACCTGTGGCAAAACTATGGCGGAGAACAAGGGCAAATGCTATGATTGTGGGGCTACTGTAACTCGCTTAATAAGAGTTCGTCCTTTACCGCGTTGTTCTTAAAGAGCGTCATGATTTGAATGTTTTAAATTTGTACTCATGTGATTAGGGGTTCTTATTTATGACAGATTTAAGAATTTTCATAATAGCGTGGATTGAGTACTGTCTGCCTTCTCTTTCTGAGAGTGCATGATGAACTATATTTTAGGAATACAATGTTCGAGCAAGTGCAAGTAGCGACAAGAACTACTTCATTGGTAGGTTCATGAGTGGGCTGCCGAACTTTTCGAAGAAGAGAAATGCTGAGAATAAATGGTCTCTTTACAAGGAAGGTCTACAAGGACGCCAACTTACGGATGCCCTTCGGGTACTTAGTTCACTTCGATTTGCTTCCTTTCTTTGGTTTGTCTTGGATAGTTTATTGTTTTGGAAGCCTGGATATTGGTGACTTGATATCTATTTTTCATTTTAGAAGTTATAACTGTTAAGAGTAGCTAGGGAAAAAGTAATTGATGCTATCTTTCAACAAAACTTAAAGGGAACACCTATGAAGCACAAATGAATATGAATACTTCGATACGGCAATTTCTAAAAAAAATAGGAAATTAATATGCTGAGGGTATGCTTTTACTAAGATTCTAAAATATTGATAAATTTAACTCAAAGGTACTAAAAAACAATGTCAAGTTAATGACAATAGTGCAAAATTCAAATATACAATACAAACATTGAAATTCAATATGAAAAGTAGCATTAGAGATATTGAAATACAATAATAGCAATTCGAATACGATAGAAAAAGTCAGAAAAGGAGAACTACTAAGATAAATAAAGAACATCATTAAATTGTTGAATATCTTTTGTTTGGTTTTGTGGGGACTTAGTCGCGAAGATGAGGATTCGATGATAACATGATTTCATTTTAAAAAAAAGTTCTTTTACTTTAAATTTCTTTTTTAGCTTTTGGTTGGGGCGATATGCTGATTATTTTGAGTTGATAAAGATTAGATGAGTCTCTTATTTTATTTTAGAAAAGGTGCATAAACTTATCCTCTTTGTATTAGTTGGAAATTCTCTATTTGTTTTACGACTTATGTATATGTTAGGGCTATCTAACTACTTGTTTTGTGTTCACTATTTATTTATTAACTTGTGTTAACCATAACTTAGGTTAATATCTTGTTGCATTTGGTTAATATCTTGTTGCATTTATCTTTTGTTGTTTCTCTCTTCAAGTTAGTTGTTTTTTAGCATATTCCTTACCTTTTCTTTCTTTTTTTGTTTGTTTGTTTGTTTCTTTCCTTTTTAATGGTTATTTTCACTTTTGTTCTGCTTGACACTGATCAATTTTGATTATCTTAACATAGGAAAAGTACAAGAATAGACCTTGGCTGTTGGAAGATGAAACAGGCCAATTTCAATTCCAAGGTCATCTTGAGGGCTCACAATCAGCCACATACTACTTGCTTGTATTGCAGGGAAAGGAATTTACTGCCATTCCTGCAGGTTCCTGGTATGGTTTATCTTTGAGTTATAGCCCTTTATTTGTTTGGCATAGTCTTCTTCATACATGTTTATTATTCTTTCCTATTCTTGGAGGATTTTATATTGTCCAGATGAAAAATTTTACGTAATTCATGGTGGTAGCAGAAAGACTGACCTCAATTTTCAGGTACAACTTCAATAAAGTGGCACAGTATAAGCAACTTACATTGGAGGAGGCAGAAGAAAAAATGAAGAATCGAAAGAAGACGGCAGATGGATATGAAAGATGGATGATGAAAGCTGCAAGTAATGGTCCTGCTGCATTTGGTGAAGTTGAGAAGTTTGATGACAAAGAAACTGTTGGTACTAGTGGTAGGGGACGGAGAAAAACTACGGGTGATGAGAATGAAGGCAACGTCTCGGATAGGGGAGAAGAAGATGAAGAAGAAGAGGCAGCAAGGAAGAACAGATTGGGACTCAGTAAAAAGGGCGGTGGTGATGACGATGATGAGGAAGGTCCTAGGGGTGGTGACCATGATTTGGATGATGATGATATTGAGAAAGGTTATCTTTTCCATTTAAATAAAAGAAAATTTTGTTTAGGTCAAGCATGCCATTGTCATCTCGATATACTTTCTCTTGCCATCTGTTGATTGTTGCCGTCACCACCATACAGGAACCACATGCATCAAATGAGTGGTTTAGATTTGGGGACAGCATTAGATTAGCAAATGCTTTTGTTCTCCTGTAAGATTCACATTATCACCATGTTCTTTTAATAGCGTTTGGCAAGGAAACACTTTCTTGTATCCATGCATATGAAACTTGGCAGTTAATTCATATAAAGGGCATTGAGGCATTGTTCCTCTATGTTAACTTGTCTGTCCAACTTTCTAGGGGATGATTGGGAGCACGAAGAGATTTTTACTGATGATGATGAAACTACTGCTCCAGATCGTGAAGAAAGGGAGGATTTAGCCCCTGAAGTTCCTGCACCTCCAGAAATCAAACAGGTTGCCCATTCTTTATGAAAAAAGAAACAAAAAACTCACTTTACGTATCACTTCATCCATTGAAACAATTGTTTCTATTTAACAGTTGAAGTAACTGTATAAGTTTTTCTCCAAAGGTGTTGGAAAGGGTGGTAAGAAATGAAATATTAGAATGTTTTTGTAAAAAATAAAAGAGAGATTAAAAAAATGGAATGAAAAGACAAGCTAATGCAGGATGGGTGATGGAAAATTGGGAAGGTGGAGAGGAGATTATGAATGACCATAATTTTTTCTGAAAGTAGTCACATGCTCATGTACAGGTGTGATAAATGAAAACAGTATATAATTTTCCATTGAACTTTAACATCCCCTCAAGTTCTGGTTGACATCTTGAATTGTCTGAAGCCCCCCCCCTCCCTTTTTTTTAAATATTTTATTTTATTTTTATGTAGTTTAACGTTTCAAGTCAAAGACATCACATCTTGGATATAAATGGCTCGTTTATATGACTAGCTTATAGTTCAGTAAATTATGGACTCTTTGCAGGATGAAGAAGATGAGGATGAAGAAAATGAAGGGGAAGGGGGGCTGAGCAAATCTGGGAAAGAGTTGAAGAAATTGCTTAGGCGTACTGGGGGTCTTAATGATTCAGATGGAGAGGATGACGAGGATGACGACGATGTAAGAGACTATTGTCATTTCTCTTGAATAACAGCATGATCCAAAAACATTAAATTATAGTGACCTACTAGCAGTTTTTGGTTGGATTCTGTATGAAGTGCATTTGATAATTTGTCGTGGTATTTTTATGCATTCTGAAGAAGCATTATCTGAACATATTAGCTGTTTGCAAATGCCTTTTTTCTATATAAATATGACAGAAGCTTTGGAGAATGATAGGGCTGTCCTAGCGAACAACTGCCTTGGGGTTGCCTAGTGCTTAGTGGTTAATGAGGGTCATGTAAATAATCAAAGGCTAAAGCAAATGAGTTCAAATCATAGTAGTCAATATTTAGGATTTAATGTCCTCGTTACTTTATCAACCAAAAGCAATAGAGACGAGCAGTTGTTCCATCAGAGCATGCCTAAAAAGGAAAAGAAAAAAGATGGGCTCTATTGTAAACAAAGAAGATCCGTTAGTGTCCATGATGCCTTTATTTGCTCTGAATCCTAACTGATCTGATTGCTGCAGTATTTAACTTTGCTTATTGTTATACTGCCTTCAATTTTATCCCGTTAAGTGGTTTGTACCTTTTATGCATTCAGGTGGACGAGGATACTGGTGGCACTCCTGTCTTACCTTCGAAGCAGAAGGATACAGTTAAAGAAGAAGCTGCAGCCAACAGTCCCTCAAAACCAACACCTTCTGGATCTGCTAAGGGAACCCCTTCTACTGCGAAAACGGCAAAGGGGAAAAGGAAAAATGGTGAGGATGTGAAACCATCCAGTGCACCTCCAAAGAAAATGAAAACAGAGACGGTATGTCATGCCATCTCATGGTTTAAGCTCCAAAAAAGCACTTCCATTTGTATCAGAAGGATAATGCGGCTAAGCCATTCTTTGTTGTATACTAACATTTTTTGGGATATTCAGGAATTGAAGCCTACAGATGAAGGTGTGCCTACTTCTAAAAGTACGGCCTCAAAAGGTGCACCGGCATCAGTCAAAACTGAACCATCATCGCATTCTGGACCTGTTACTGAGGAAGAAATTAGGGCTGTCTTGCGGCAAAGGACACCTGTAACTACACAGGATCTTGTTGCAAAATTCAAAGCAAGATTGCGAACTCCAGAGGTATTTTTGTCATGTCTTCATGGCATGTTTTTACATTAATTGTTCTTATTTTCAATATGGTACCATGTTATTGAAACAAGTTTCACATTTTTTTGGTTGAGCGATGGCAGTTTTGGGTCTTATATCATTCTCTTTACAAGTGAATTGTAGGTAGTTTGAAACATGAAAGGATATTATTCAGAAACTTGATGGGCCATGTTAATTATCTGATCCCTTTTACTATCCCATAATGCAGGACAAAAATGCTTTTGCTGAAATACTACGGAGAATTTCAAGGATTCAAAAGATAAATGGAGGTCCGAGTTACGTTGTGTTGAGAAAACCTGAAGACTAGAAGAATCAAGTTGATGTTTCATCTTTGTGATGTAGCTGATTCATGATTCCTTACTGGTTGGTGTGTTATGGTCGTTAAGTACAATGTTTATGTGTCGAAACTCTATGCTGCAATAGCTTGAGAGGGCCTCCTCTTTCACATGTGATGTGATGAACTTGATATGGTACACTTTTATCTAGGCAAATGCAAAGGATAAATTTGTGGATTTGATAGAGGCATTCACTATTGGAATTTAAGTTCAACAAGATATAGGTATACGTTGAGAAAGAAACGAAAGTTTCTTCAGACATTTTGTCATATTGGTTGTCATATCAATTTTGGCATTTTCTCAGAGTCGTTTCTAAAAGAATGCTTGGAGTAAAATAATGTTAAAATAAATAGGGTATTCTTGGTTTCGTTGAAGTGTTTGGTGAATAAATTTAATA

mRNA sequence

GCGCTCTCTCCCCTTGATCTCAGCTTTTCTCACCTCCACGTCGCCACCACCTTCTCCGCCCTATCGCTTAGCCGCCTCTGTCGTGCTCCGCCCTCTTTACGCCTGCCGTCACCACCAGCAGAGGTATTGTAGATTTTTGTGGCTGAATTAAGGGGTGTGAGATGTCGTTCGATTTGCTCCTGAAGCCATCGTGCAGTGGATGTGGATCCACGACGGAGTTGTATGGGAGCAATTGCAAGCACATGACATTGTGTTTGACCTGTGGCAAAACTATGGCGGAGAACAAGGGCAAATGCTATGATTGTGGGGCTACTGTAACTCGCTTAATAAGAATTTAAGAATTTTCATAATAGCGTGGATTGAGTACTGTCTGCCTTCTCTTTCTGAGAGTGCATGATGAACTATATTTTAGGAATACAATGTTCGAGCAAGTGCAAGTAGCGACAAGAACTACTTCATTGGTAGGTTCATGAGTGGGCTGCCGAACTTTTCGAAGAAGAGAAATGCTGAGAATAAATGGTCTCTTTACAAGGAAGGTCTACAAGGACGCCAACTTACGGATGCCCTTCGGGAAAAGTACAAGAATAGACCTTGGCTGTTGGAAGATGAAACAGGCCAATTTCAATTCCAAGGTCATCTTGAGGGCTCACAATCAGCCACATACTACTTGCTTGTATTGCAGGGAAAGGAATTTACTGCCATTCCTGCAGGTTCCTGGTACAACTTCAATAAAGTGGCACAGTATAAGCAACTTACATTGGAGGAGGCAGAAGAAAAAATGAAGAATCGAAAGAAGACGGCAGATGGATATGAAAGATGGATGATGAAAGCTGCAAGTAATGGTCCTGCTGCATTTGGTGAAGTTGAGAAGTTTGATGACAAAGAAACTGTTGGTACTAGTGGTAGGGGACGGAGAAAAACTACGGGTGATGAGAATGAAGGCAACGTCTCGGATAGGGGAGAAGAAGATGAAGAAGAAGAGGCAGCAAGGAAGAACAGATTGGGACTCAGTAAAAAGGGCGGTGGTGATGACGATGATGAGGAAGGTCCTAGGGGTGGTGACCATGATTTGGATGATGATGATATTGAGAAAGGGGATGATTGGGAGCACGAAGAGATTTTTACTGATGATGATGAAACTACTGCTCCAGATCGTGAAGAAAGGGAGGATTTAGCCCCTGAAGTTCCTGCACCTCCAGAAATCAAACAGGATGAAGAAGATGAGGATGAAGAAAATGAAGGGGAAGGGGGGCTGAGCAAATCTGGGAAAGAGTTGAAGAAATTGCTTAGGCGTACTGGGGGTCTTAATGATTCAGATGGAGAGGATGACGAGGATGACGACGATGTGGACGAGGATACTGGTGGCACTCCTGTCTTACCTTCGAAGCAGAAGGATACAGTTAAAGAAGAAGCTGCAGCCAACAGTCCCTCAAAACCAACACCTTCTGGATCTGCTAAGGGAACCCCTTCTACTGCGAAAACGGCAAAGGGGAAAAGGAAAAATGGTGAGGATGTGAAACCATCCAGTGCACCTCCAAAGAAAATGAAAACAGAGACGGAATTGAAGCCTACAGATGAAGGTGTGCCTACTTCTAAAAGTACGGCCTCAAAAGGTGCACCGGCATCAGTCAAAACTGAACCATCATCGCATTCTGGACCTGTTACTGAGGAAGAAATTAGGGCTGTCTTGCGGCAAAGGACACCTGTAACTACACAGGATCTTGTTGCAAAATTCAAAGCAAGATTGCGAACTCCAGAGGACAAAAATGCTTTTGCTGAAATACTACGGAGAATTTCAAGGATTCAAAAGATAAATGGAGGTCCGAGTTACGTTGTGTTGAGAAAACCTGAAGACTAGAAGAATCAAGTTGATGTTTCATCTTTGTGATGTAGCTGATTCATGATTCCTTACTGGTTGGTGTGTTATGGTCGTTAAGTACAATGTTTATGTGTCGAAACTCTATGCTGCAATAGCTTGAGAGGGCCTCCTCTTTCACATGTGATGTGATGAACTTGATATGGTACACTTTTATCTAGGCAAATGCAAAGGATAAATTTGTGGATTTGATAGAGGCATTCACTATTGGAATTTAAGTTCAACAAGATATAGGTATACGTTGAGAAAGAAACGAAAGTTTCTTCAGACATTTTGTCATATTGGTTGTCATATCAATTTTGGCATTTTCTCAGAGTCGTTTCTAAAAGAATGCTTGGAGTAAAATAATGTTAAAATAAATAGGGTATTCTTGGTTTCGTTGAAGTGTTTGGTGAATAAATTTAATA

Coding sequence (CDS)

ATGAGTGGGCTGCCGAACTTTTCGAAGAAGAGAAATGCTGAGAATAAATGGTCTCTTTACAAGGAAGGTCTACAAGGACGCCAACTTACGGATGCCCTTCGGGAAAAGTACAAGAATAGACCTTGGCTGTTGGAAGATGAAACAGGCCAATTTCAATTCCAAGGTCATCTTGAGGGCTCACAATCAGCCACATACTACTTGCTTGTATTGCAGGGAAAGGAATTTACTGCCATTCCTGCAGGTTCCTGGTACAACTTCAATAAAGTGGCACAGTATAAGCAACTTACATTGGAGGAGGCAGAAGAAAAAATGAAGAATCGAAAGAAGACGGCAGATGGATATGAAAGATGGATGATGAAAGCTGCAAGTAATGGTCCTGCTGCATTTGGTGAAGTTGAGAAGTTTGATGACAAAGAAACTGTTGGTACTAGTGGTAGGGGACGGAGAAAAACTACGGGTGATGAGAATGAAGGCAACGTCTCGGATAGGGGAGAAGAAGATGAAGAAGAAGAGGCAGCAAGGAAGAACAGATTGGGACTCAGTAAAAAGGGCGGTGGTGATGACGATGATGAGGAAGGTCCTAGGGGTGGTGACCATGATTTGGATGATGATGATATTGAGAAAGGGGATGATTGGGAGCACGAAGAGATTTTTACTGATGATGATGAAACTACTGCTCCAGATCGTGAAGAAAGGGAGGATTTAGCCCCTGAAGTTCCTGCACCTCCAGAAATCAAACAGGATGAAGAAGATGAGGATGAAGAAAATGAAGGGGAAGGGGGGCTGAGCAAATCTGGGAAAGAGTTGAAGAAATTGCTTAGGCGTACTGGGGGTCTTAATGATTCAGATGGAGAGGATGACGAGGATGACGACGATGTGGACGAGGATACTGGTGGCACTCCTGTCTTACCTTCGAAGCAGAAGGATACAGTTAAAGAAGAAGCTGCAGCCAACAGTCCCTCAAAACCAACACCTTCTGGATCTGCTAAGGGAACCCCTTCTACTGCGAAAACGGCAAAGGGGAAAAGGAAAAATGGTGAGGATGTGAAACCATCCAGTGCACCTCCAAAGAAAATGAAAACAGAGACGGAATTGAAGCCTACAGATGAAGGTGTGCCTACTTCTAAAAGTACGGCCTCAAAAGGTGCACCGGCATCAGTCAAAACTGAACCATCATCGCATTCTGGACCTGTTACTGAGGAAGAAATTAGGGCTGTCTTGCGGCAAAGGACACCTGTAACTACACAGGATCTTGTTGCAAAATTCAAAGCAAGATTGCGAACTCCAGAGGACAAAAATGCTTTTGCTGAAATACTACGGAGAATTTCAAGGATTCAAAAGATAAATGGAGGTCCGAGTTACGTTGTGTTGAGAAAACCTGAAGACTAG

Protein sequence

MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED

Homology

[Close]

BLAST of MELO3C012788 vs. NCBI nr
Match: XP_016900419.1 (PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIF subunit alpha [Cucumis melo])

HSP 1 Score: 864.4 bits (2232), Expect = 4.5e-247
Identity = 461/462 (99.78%), Postives = 461/462 (99.78%), Query Frame = 0


Query: 1   MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGS 60
           MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGS
Sbjct: 77  MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGS 136

Query: 61  QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 120
           QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAE KMKNRKKTADGYERWMMK
Sbjct: 137 QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEXKMKNRKKTADGYERWMMK 196

Query: 121 AASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGL 180
           AASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGL
Sbjct: 197 AASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGL 256

Query: 181 SKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP 240
           SKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP
Sbjct: 257 SKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP 316

Query: 241 APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGT 300
           APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGT
Sbjct: 317 APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGT 376

Query: 301 PVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMK 360
           PVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMK
Sbjct: 377 PVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMK 436

Query: 361 TETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA 420
           TETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA
Sbjct: 437 TETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA 496

Query: 421 KFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED 463
           KFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED
Sbjct: 497 KFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED 538

[Close]

BLAST of MELO3C012788 vs. NCBI nr
Match: XP_031738318.1 (transcription initiation factor IIF subunit alpha isoform X3 [Cucumis sativus] >XP_031738319.1 transcription initiation factor IIF subunit alpha isoform X3 [Cucumis sativus])

HSP 1 Score: 856.7 bits (2212), Expect = 9.4e-245
Identity = 457/462 (98.92%), Postives = 459/462 (99.35%), Query Frame = 0


Query: 1   MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGS 60
           MSGLPNFSKKRNAENKWSLYKEGLQGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGS
Sbjct: 1   MSGLPNFSKKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGS 60

Query: 61  QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 120
           QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK
Sbjct: 61  QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 120

Query: 121 AASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGL 180
           AASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGL
Sbjct: 121 AASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGL 180

Query: 181 SKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP 240
           SKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP
Sbjct: 181 SKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP 240

Query: 241 APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGT 300
           APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDDVDEDTGGT
Sbjct: 241 APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGT 300

Query: 301 PVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMK 360
           PVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMK
Sbjct: 301 PVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMK 360

Query: 361 TETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA 420
           TETE K TDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA
Sbjct: 361 TETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA 420

Query: 421 KFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED 463
           KFKARLRTPEDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Sbjct: 421 KFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 462

[Close]

BLAST of MELO3C012788 vs. NCBI nr
Match: XP_004152016.1 (transcription initiation factor IIF subunit alpha isoform X1 [Cucumis sativus] >XP_011651639.1 transcription initiation factor IIF subunit alpha isoform X1 [Cucumis sativus] >KGN58337.1 hypothetical protein Csa_017587 [Cucumis sativus])

HSP 1 Score: 856.7 bits (2212), Expect = 9.4e-245
Identity = 457/462 (98.92%), Postives = 459/462 (99.35%), Query Frame = 0


Query: 1   MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGS 60
           MSGLPNFSKKRNAENKWSLYKEGLQGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGS
Sbjct: 77  MSGLPNFSKKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGS 136

Query: 61  QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 120
           QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK
Sbjct: 137 QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 196

Query: 121 AASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGL 180
           AASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGL
Sbjct: 197 AASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGL 256

Query: 181 SKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP 240
           SKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP
Sbjct: 257 SKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP 316

Query: 241 APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGT 300
           APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDDVDEDTGGT
Sbjct: 317 APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGT 376

Query: 301 PVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMK 360
           PVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMK
Sbjct: 377 PVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMK 436

Query: 361 TETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA 420
           TETE K TDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA
Sbjct: 437 TETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA 496

Query: 421 KFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED 463
           KFKARLRTPEDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Sbjct: 497 KFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 538

[Close]

BLAST of MELO3C012788 vs. NCBI nr
Match: XP_038888043.1 (transcription initiation factor IIF subunit alpha isoform X2 [Benincasa hispida])

HSP 1 Score: 834.3 bits (2154), Expect = 5.0e-238
Identity = 448/462 (96.97%), Postives = 453/462 (98.05%), Query Frame = 0


Query: 1   MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGS 60
           MSGLPNFSKKRNAENKWSLYK+GLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGS
Sbjct: 1   MSGLPNFSKKRNAENKWSLYKDGLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGS 60

Query: 61  QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 120
           QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK
Sbjct: 61  QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 120

Query: 121 AASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGL 180
           AASNGPAAFGEVEKFDDKE VGTSGRGRRK TGDENEGNVSDRGEEDEEEEA RKNRLGL
Sbjct: 121 AASNGPAAFGEVEKFDDKEGVGTSGRGRRKPTGDENEGNVSDRGEEDEEEEAQRKNRLGL 180

Query: 181 SKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP 240
           +KKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP
Sbjct: 181 NKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP 240

Query: 241 APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGT 300
           APPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDDVDEDTGGT
Sbjct: 241 APPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGT 300

Query: 301 PVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMK 360
           PVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMK
Sbjct: 301 PVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMK 360

Query: 361 TETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA 420
           TETE K TDE V TSKSTASKGAPA VKTEP+SHSGPVTEEEIRAVLRQRTPVTTQDLVA
Sbjct: 361 TETESKSTDE-VSTSKSTASKGAPALVKTEPASHSGPVTEEEIRAVLRQRTPVTTQDLVA 420

Query: 421 KFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED 463
           KFKARLRTPEDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Sbjct: 421 KFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 461

[Close]

BLAST of MELO3C012788 vs. NCBI nr
Match: XP_038888042.1 (transcription initiation factor IIF subunit alpha isoform X1 [Benincasa hispida])

HSP 1 Score: 834.3 bits (2154), Expect = 5.0e-238
Identity = 448/462 (96.97%), Postives = 453/462 (98.05%), Query Frame = 0


Query: 1   MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGS 60
           MSGLPNFSKKRNAENKWSLYK+GLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGS
Sbjct: 77  MSGLPNFSKKRNAENKWSLYKDGLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGS 136

Query: 61  QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 120
           QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK
Sbjct: 137 QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 196

Query: 121 AASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGL 180
           AASNGPAAFGEVEKFDDKE VGTSGRGRRK TGDENEGNVSDRGEEDEEEEA RKNRLGL
Sbjct: 197 AASNGPAAFGEVEKFDDKEGVGTSGRGRRKPTGDENEGNVSDRGEEDEEEEAQRKNRLGL 256

Query: 181 SKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP 240
           +KKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP
Sbjct: 257 NKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP 316

Query: 241 APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGT 300
           APPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDDVDEDTGGT
Sbjct: 317 APPEIKQDEDDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGT 376

Query: 301 PVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMK 360
           PVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMK
Sbjct: 377 PVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMK 436

Query: 361 TETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA 420
           TETE K TDE V TSKSTASKGAPA VKTEP+SHSGPVTEEEIRAVLRQRTPVTTQDLVA
Sbjct: 437 TETESKSTDE-VSTSKSTASKGAPALVKTEPASHSGPVTEEEIRAVLRQRTPVTTQDLVA 496

Query: 421 KFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED 463
           KFKARLRTPEDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Sbjct: 497 KFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 537

[Close]

BLAST of MELO3C012788 vs. ExPASy Swiss-Prot
Match: Q9SU25 (Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana OX=3702 GN=RAP74 PE=1 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 2.9e-148
Identity = 316/474 (66.67%), Postives = 376/474 (79.32%), Query Frame = 0


Query: 1   MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGS 60
           ++GLPNF  K+ +ENKWSL K+  QGRQ TDA REK KN+PW+LEDETGQFQ+QGHLEGS
Sbjct: 77  VTGLPNF--KKGSENKWSLRKDIPQGRQFTDAQREKLKNKPWILEDETGQFQYQGHLEGS 136

Query: 61  QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 120
           QSATYYLLV+Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMK
Sbjct: 137 QSATYYLLVMQNKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMK 196

Query: 121 AASNGPAAFGEVEKFDDKETVGTS---GRGRRKTT-GDENEGNVSDRGEEDEEEEAARKN 180
           AA+NGPA FGEV+  ++KE+ GTS   GRGR+K++ GDE EGNVSDRG+EDEEEEA+RK+
Sbjct: 197 AANNGPALFGEVD--NEKESGGTSGGGGRGRKKSSGGDEEEGNVSDRGDEDEEEEASRKS 256

Query: 181 RLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-L 240
           RLGL++K   DDDDEEGPRGGD D+DDDDIEKGDDWEHEEIFTDDDE    D EERED L
Sbjct: 257 RLGLNRK-SNDDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLL 316

Query: 241 APEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDE 300
           APE+PAPPEIKQDE+DE+ E E EGGLSKSGKELKKLL +  GL++SD +DD+D DD +E
Sbjct: 317 APEIPAPPEIKQDEDDEENEEE-EGGLSKSGKELKKLLGKANGLDESDEDDDDDSDDEEE 376

Query: 301 DTGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSS 360
              GT V  SKQK+  KEE   N+P+KP PSG  +GTP  AK +KGKRK  +G+  KPSS
Sbjct: 377 TNYGT-VTNSKQKEAAKEEPVDNAPAKPAPSGPPRGTP-PAKPSKGKRKLNDGDSKKPSS 436

Query: 361 APPKKMKTETE----LKPTDEGVPTSKSTASKGAPASVKTEPSSHS----GPVTEEEIRA 420
           +  KK+KTE +    LK       +  +T +K   A   + P+S S    GPVTE+EIRA
Sbjct: 437 SVQKKVKTENDPKSSLKEERANTVSKSNTPTKAVKAEPASAPASSSSAATGPVTEDEIRA 496

Query: 421 VLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRK 460
           VL ++  VTTQDLV++FKARL+T EDKNAFA ILR+IS+IQK  G  ++VVLR+
Sbjct: 497 VLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLRE 542

[Close]

BLAST of MELO3C012788 vs. ExPASy Swiss-Prot
Match: Q54WV4 (General transcription factor IIF subunit 1 OS=Dictyostelium discoideum OX=44689 GN=gtf2f1 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.6e-13
Identity = 116/427 (27.17%), Postives = 186/427 (43.56%), Query Frame = 0


Query: 38  KNRPWLLEDETGQFQFQGHLEGSQ-SATYYLLVLQGK-EFTAIPAGSWYNFNKVAQYKQL 97
           K  PW LED  G   +QG++EG+Q S+ Y+L + Q      A+P   WYNF    +++ L
Sbjct: 146 KTIPWKLEDSEGNNTYQGNVEGNQASSNYFLFMFQSDGSIKAVPCNDWYNFRPKKEFQSL 205

Query: 98  TLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDE 157
           T EEAE+ MK + +  D +   + K      +  G  E    K          R    D 
Sbjct: 206 TTEEAEDFMKKKNQEWDVFTSRLQKKTDPSGSGSGGSESSGKKSIEELEEAEHRNRNEDP 265

Query: 158 NEGNVSDRGEEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHE 217
           N    ++  ++ ++  A R+ R     +G G+D D         D DDD    GD     
Sbjct: 266 NRYKTTNEEKKKKKAPARRRER---EDEGNGEDGDAPDFESKFDDDDDDTYMDGDG---- 325

Query: 218 EIFTDDDETTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRR 277
              T +DE    + EE ED+        E+K+  + + ++N+ E  L+    + K     
Sbjct: 326 --LTGEDENQIEEDEEEEDV-DLTEGGLEMKKMIKKQQQQNDSEDDLA-DDDDKKDNNGG 385

Query: 278 TGGLNDSDGEDDEDDDDVDED-------TGGTPVLPSKQKDTVKEEAAANSPSKPTPSGS 337
           TGG +D D  DDEDD+D D+D         G          +VK+E      SK +    
Sbjct: 386 TGGGDDED--DDEDDEDPDQDDLSNLPKVFGKSNADGTTNSSVKKEDDGGKDSKSSKKSK 445

Query: 338 AKGTPSTAKTAKGK-RKNGEDVKPSSAPPKKMKTETELKPTDEGVPTSKSTASKGAPASV 397
            K   S+ K+ + K +KN  D    +   KK+K E          P+S       +P+  
Sbjct: 446 KKDKDSSPKSKEKKSKKNKSDSSVDNRESKKIKKE----------PSSPQAVQPNSPSQQ 505

Query: 398 KTEPSS----HSGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRIS 451
           + +       +  P TEE I+ VL++   V + DL+  FK  L+ P++K  F  ++  ++
Sbjct: 506 QQQQQQNIDPNDPPFTEEYIKIVLQKSKKVKSLDLINIFKGPLKNPDNKPIFLAMVHNVA 549

[Close]

BLAST of MELO3C012788 vs. ExPASy TrEMBL
Match: A0A1S4DWR2 (Transcription initiation factor IIF subunit alpha OS=Cucumis melo OX=3656 GN=LOC103489800 PE=3 SV=1)

HSP 1 Score: 864.4 bits (2232), Expect = 2.2e-247
Identity = 461/462 (99.78%), Postives = 461/462 (99.78%), Query Frame = 0


Query: 1   MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGS 60
           MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGS
Sbjct: 77  MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGS 136

Query: 61  QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 120
           QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAE KMKNRKKTADGYERWMMK
Sbjct: 137 QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEXKMKNRKKTADGYERWMMK 196

Query: 121 AASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGL 180
           AASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGL
Sbjct: 197 AASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGL 256

Query: 181 SKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP 240
           SKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP
Sbjct: 257 SKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP 316

Query: 241 APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGT 300
           APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGT
Sbjct: 317 APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGT 376

Query: 301 PVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMK 360
           PVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMK
Sbjct: 377 PVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMK 436

Query: 361 TETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA 420
           TETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA
Sbjct: 437 TETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA 496

Query: 421 KFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED 463
           KFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED
Sbjct: 497 KFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED 538

[Close]

BLAST of MELO3C012788 vs. ExPASy TrEMBL
Match: A0A0A0LCA6 (Transcription initiation factor IIF subunit alpha OS=Cucumis sativus OX=3659 GN=Csa_3G624050 PE=3 SV=1)

HSP 1 Score: 856.7 bits (2212), Expect = 4.5e-245
Identity = 457/462 (98.92%), Postives = 459/462 (99.35%), Query Frame = 0


Query: 1   MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGS 60
           MSGLPNFSKKRNAENKWSLYKEGLQGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGS
Sbjct: 77  MSGLPNFSKKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGS 136

Query: 61  QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 120
           QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK
Sbjct: 137 QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 196

Query: 121 AASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGL 180
           AASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGL
Sbjct: 197 AASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGL 256

Query: 181 SKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP 240
           SKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP
Sbjct: 257 SKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP 316

Query: 241 APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGT 300
           APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDDVDEDTGGT
Sbjct: 317 APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGT 376

Query: 301 PVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMK 360
           PVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMK
Sbjct: 377 PVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKMK 436

Query: 361 TETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA 420
           TETE K TDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA
Sbjct: 437 TETESKATDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLVA 496

Query: 421 KFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED 463
           KFKARLRTPEDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Sbjct: 497 KFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 538

[Close]

BLAST of MELO3C012788 vs. ExPASy TrEMBL
Match: A0A6J1ESX1 (Transcription initiation factor IIF subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC111437424 PE=3 SV=1)

HSP 1 Score: 806.2 bits (2081), Expect = 7.1e-230
Identity = 434/463 (93.74%), Postives = 447/463 (96.54%), Query Frame = 0


Query: 1   MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGS 60
           MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGS
Sbjct: 77  MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQSQFQGHLEGS 136

Query: 61  QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 120
           QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK
Sbjct: 137 QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 196

Query: 121 AASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGL 180
           AASNGPAAFGEVEKFDDK++VG +GRGRRK T DENEGNVSDRGEEDEEEEAARKNRLGL
Sbjct: 197 AASNGPAAFGEVEKFDDKDSVGATGRGRRKPTSDENEGNVSDRGEEDEEEEAARKNRLGL 256

Query: 181 SKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP 240
           +KKGGGDDDDEEGPRGG+HDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP
Sbjct: 257 NKKGGGDDDDEEGPRGGNHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP 316

Query: 241 APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG-EDDEDDDDVDEDTGG 300
           APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG E+D+DDDD +E++GG
Sbjct: 317 APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEEEDDDDDDAEEESGG 376

Query: 301 TPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKM 360
           TPV PSKQKD VKEEAAANSPSKP PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKM
Sbjct: 377 TPVAPSKQKDAVKEEAAANSPSKPAPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKKM 436

Query: 361 KTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDLV 420
           KTETE K TDEGV TS+STASKGA ASVKTEP+S SGPVTEEEIRAVLRQRTPVTTQDLV
Sbjct: 437 KTETESKSTDEGVSTSRSTASKGAAASVKTEPASASGPVTEEEIRAVLRQRTPVTTQDLV 496

Query: 421 AKFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED 463
           AKFKARLR+ EDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Sbjct: 497 AKFKARLRSHEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 539

[Close]

BLAST of MELO3C012788 vs. ExPASy TrEMBL
Match: A0A6J1ESV2 (Transcription initiation factor IIF subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC111437424 PE=3 SV=1)

HSP 1 Score: 805.8 bits (2080), Expect = 9.2e-230
Identity = 434/464 (93.53%), Postives = 447/464 (96.34%), Query Frame = 0


Query: 1   MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGS 60
           MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGS
Sbjct: 1   MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQSQFQGHLEGS 60

Query: 61  QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 120
           QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK
Sbjct: 61  QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 120

Query: 121 AASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGL 180
           AASNGPAAFGEVEKFDDK++VG +GRGRRK T DENEGNVSDRGEEDEEEEAARKNRLGL
Sbjct: 121 AASNGPAAFGEVEKFDDKDSVGATGRGRRKPTSDENEGNVSDRGEEDEEEEAARKNRLGL 180

Query: 181 SKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP 240
           +KKGGGDDDDEEGPRGG+HDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP
Sbjct: 181 NKKGGGDDDDEEGPRGGNHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP 240

Query: 241 APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG--EDDEDDDDVDEDTG 300
           APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG  EDD+DDD+ +E++G
Sbjct: 241 APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEEEDDDDDDEAEEESG 300

Query: 301 GTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKK 360
           GTPV PSKQKD VKEEAAANSPSKP PSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKK
Sbjct: 301 GTPVAPSKQKDAVKEEAAANSPSKPAPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKK 360

Query: 361 MKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQDL 420
           MKTETE K TDEGV TS+STASKGA ASVKTEP+S SGPVTEEEIRAVLRQRTPVTTQDL
Sbjct: 361 MKTETESKSTDEGVSTSRSTASKGAAASVKTEPASASGPVTEEEIRAVLRQRTPVTTQDL 420

Query: 421 VAKFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED 463
           VAKFKARLR+ EDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Sbjct: 421 VAKFKARLRSHEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 464

[Close]

BLAST of MELO3C012788 vs. ExPASy TrEMBL
Match: A0A6J1K1N5 (Transcription initiation factor IIF subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC111491607 PE=3 SV=1)

HSP 1 Score: 796.2 bits (2055), Expect = 7.3e-227
Identity = 431/466 (92.49%), Postives = 445/466 (95.49%), Query Frame = 0


Query: 1   MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGS 60
           MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGS
Sbjct: 77  MSGLPNFSKKRNAENKWSLYKEGLQGRQLTDALREKYKNRPWLLEDETGQSQFQGHLEGS 136

Query: 61  QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 120
           QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK
Sbjct: 137 QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 196

Query: 121 AASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGL 180
           AASNGPAAFGEVEKFDDK+++G +GRGRRK T DENEGNVSDRGEEDEEEEAARKNRLGL
Sbjct: 197 AASNGPAAFGEVEKFDDKDSIGATGRGRRKPTSDENEGNVSDRGEEDEEEEAARKNRLGL 256

Query: 181 SKKGGGDDDDEEGPRGGDHDLDDDDIEK-GDDWEHEEIFTDDDETTAPDREEREDLAPEV 240
           +KKGGGDDDDEEGPRGGDHDLDDDDIE  GDDWEHEEIFTDDDETTAPDREEREDLAPEV
Sbjct: 257 NKKGGGDDDDEEGPRGGDHDLDDDDIESIGDDWEHEEIFTDDDETTAPDREEREDLAPEV 316

Query: 241 PAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG---EDDEDDDDVDED 300
           PAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRR+GGLNDSDG   EDD+DDDD +E+
Sbjct: 317 PAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRSGGLNDSDGEEEEDDDDDDDAEEE 376

Query: 301 TGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPP 360
           +GGTPV PSKQKD VKEEAAANSPSKP PSGSAKGT STAKTAKGKRKNGEDVKPSSAPP
Sbjct: 377 SGGTPVAPSKQKDAVKEEAAANSPSKPAPSGSAKGTSSTAKTAKGKRKNGEDVKPSSAPP 436

Query: 361 KKMKTETELKPTDEGVPTSKSTASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVTTQ 420
           KKMKTETE K TDEG+ TS+STASKGA ASVKTEP+S SGPVTEEEIRAVLRQRTPVTTQ
Sbjct: 437 KKMKTETESKSTDEGMSTSRSTASKGAAASVKTEPASASGPVTEEEIRAVLRQRTPVTTQ 496

Query: 421 DLVAKFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRKPED 463
           DLVAKFKARLR+ EDKNAFAEILRRISRIQK NGGPSYVVLRKPED
Sbjct: 497 DLVAKFKARLRSHEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED 542

[Close]

BLAST of MELO3C012788 vs. TAIR 10
Match: AT4G12610.1 (transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors )

HSP 1 Score: 422.5 bits (1085), Expect = 4.2e-118
Identity = 264/405 (65.19%), Postives = 316/405 (78.02%), Query Frame = 0


Query: 70  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAF 129
           +Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+NGPA F
Sbjct: 1   MQNKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPALF 60

Query: 130 GEVEKFDDKETVGTS---GRGRRKTT-GDENEGNVSDRGEEDEEEEAARKNRLGLSKKGG 189
           GEV+  ++KE+ GTS   GRGR+K++ GDE EGNVSDRG+EDEEEEA+RK+RLGL++K  
Sbjct: 61  GEVD--NEKESGGTSGGGGRGRKKSSGGDEEEGNVSDRGDEDEEEEASRKSRLGLNRK-S 120

Query: 190 GDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPE 249
            DDDDEEGPRGGD D+DDDDIEKGDDWEHEEIFTDDDE    D EERED LAPE+PAPPE
Sbjct: 121 NDDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLLAPEIPAPPE 180

Query: 250 IKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLP 309
           IKQDE+DE+ E E EGGLSKSGKELKKLL +  GL++SD +DD+D DD +E   GT V  
Sbjct: 181 IKQDEDDEENEEE-EGGLSKSGKELKKLLGKANGLDESDEDDDDDSDDEEETNYGT-VTN 240

Query: 310 SKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTE 369
           SKQK+  KEE   N+P+KP PSG  +GTP  AK +KGKRK  +G+  KPSS+  KK+KTE
Sbjct: 241 SKQKEAAKEEPVDNAPAKPAPSGPPRGTP-PAKPSKGKRKLNDGDSKKPSSSVQKKVKTE 300

Query: 370 TE----LKPTDEGVPTSKSTASKGAPASVKTEPSSHS----GPVTEEEIRAVLRQRTPVT 429
            +    LK       +  +T +K   A   + P+S S    GPVTE+EIRAVL ++  VT
Sbjct: 301 NDPKSSLKEERANTVSKSNTPTKAVKAEPASAPASSSSAATGPVTEDEIRAVLMEKKQVT 360

Query: 430 TQDLVAKFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRK 460
           TQDLV++FKARL+T EDKNAFA ILR+IS+IQK  G  ++VVLR+
Sbjct: 361 TQDLVSRFKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLRE 399

[Close]

BLAST of MELO3C012788 vs. TAIR 10
Match: AT4G12610.2 (transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors )

HSP 1 Score: 422.5 bits (1085), Expect = 4.2e-118
Identity = 264/405 (65.19%), Postives = 316/405 (78.02%), Query Frame = 0


Query: 70  LQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAF 129
           +Q KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+NGPA F
Sbjct: 1   MQNKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPALF 60

Query: 130 GEVEKFDDKETVGTS---GRGRRKTT-GDENEGNVSDRGEEDEEEEAARKNRLGLSKKGG 189
           GEV+  ++KE+ GTS   GRGR+K++ GDE EGNVSDRG+EDEEEEA+RK+RLGL++K  
Sbjct: 61  GEVD--NEKESGGTSGGGGRGRKKSSGGDEEEGNVSDRGDEDEEEEASRKSRLGLNRK-S 120

Query: 190 GDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPE 249
            DDDDEEGPRGGD D+DDDDIEKGDDWEHEEIFTDDDE    D EERED LAPE+PAPPE
Sbjct: 121 NDDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLLAPEIPAPPE 180

Query: 250 IKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDEDDDDVDEDTGGTPVLP 309
           IKQDE+DE+ E E EGGLSKSGKELKKLL +  GL++SD +DD+D DD +E   GT V  
Sbjct: 181 IKQDEDDEENEEE-EGGLSKSGKELKKLLGKANGLDESDEDDDDDSDDEEETNYGT-VTN 240

Query: 310 SKQKDTVKEEAAANSPSKPTPSGSAKGTPSTAKTAKGKRK--NGEDVKPSSAPPKKMKTE 369
           SKQK+  KEE   N+P+KP PSG  +GTP  AK +KGKRK  +G+  KPSS+  KK+KTE
Sbjct: 241 SKQKEAAKEEPVDNAPAKPAPSGPPRGTP-PAKPSKGKRKLNDGDSKKPSSSVQKKVKTE 300

Query: 370 TE----LKPTDEGVPTSKSTASKGAPASVKTEPSSHS----GPVTEEEIRAVLRQRTPVT 429
            +    LK       +  +T +K   A   + P+S S    GPVTE+EIRAVL ++  VT
Sbjct: 301 NDPKSSLKEERANTVSKSNTPTKAVKAEPASAPASSSSAATGPVTEDEIRAVLMEKKQVT 360

Query: 430 TQDLVAKFKARLRTPEDKNAFAEILRRISRIQKINGGPSYVVLRK 460
           TQDLV++FKARL+T EDKNAFA ILR+IS+IQK  G  ++VVLR+
Sbjct: 361 TQDLVSRFKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLRE 399

The following BLAST results are available for this feature:

BLAST of MELO3C012788 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900419.1	4.5e-247	99.78	PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIF subunit alph...	[more]
XP_031738318.1	9.4e-245	98.92	transcription initiation factor IIF subunit alpha isoform X3 [Cucumis sativus] >...	[more]
XP_004152016.1	9.4e-245	98.92	transcription initiation factor IIF subunit alpha isoform X1 [Cucumis sativus] >...	[more]
XP_038888043.1	5.0e-238	96.97	transcription initiation factor IIF subunit alpha isoform X2 [Benincasa hispida]	[more]
XP_038888042.1	5.0e-238	96.97	transcription initiation factor IIF subunit alpha isoform X1 [Benincasa hispida]	[more]

BLAST of MELO3C012788 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SU25	2.9e-148	66.67	Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana OX=370...	[more]
Q54WV4	3.6e-13	27.17	General transcription factor IIF subunit 1 OS=Dictyostelium discoideum OX=44689 ...	[more]

BLAST of MELO3C012788 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DWR2	2.2e-247	99.78	Transcription initiation factor IIF subunit alpha OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0LCA6	4.5e-245	98.92	Transcription initiation factor IIF subunit alpha OS=Cucumis sativus OX=3659 GN=...	[more]
A0A6J1ESX1	7.1e-230	93.74	Transcription initiation factor IIF subunit alpha OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1ESV2	9.2e-230	93.53	Transcription initiation factor IIF subunit alpha OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1K1N5	7.3e-227	92.49	Transcription initiation factor IIF subunit alpha OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of MELO3C012788 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12610.1	4.2e-118	65.19	transcription activators;DNA binding;RNA polymerase II transcription factors;cat...	[more]
AT4G12610.2	4.2e-118	65.19	transcription activators;DNA binding;RNA polymerase II transcription factors;cat...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 380..459 e-value: 2.6E-20 score: 74.0
IPR008851	Transcription initiation factor IIF, alpha subunit	PFAM	PF05793	TFIIF_alpha	coord: 10..458 e-value: 9.3E-131 score: 437.0
IPR008851	Transcription initiation factor IIF, alpha subunit	PANTHER	PTHR13011	TFIIF-ALPHA	coord: 2..459
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..339
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 282..297
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..369
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..402
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 370..394
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..281
IPR011039	Transcription Factor IIF, Rap30/Rap74, interaction	SUPERFAMILY	50916	Rap30/74 interaction domains	coord: 10..107
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 391..458

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012788.1	MELO3C012788.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032968	positive regulation of transcription elongation from RNA polymerase II promoter
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding