MELO3C012732 (gene) Melon (DHL92) v4

Overview
NameMELO3C012732
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionNBS-LRR type resistance protein
Locationchr09: 11709895 .. 11710082 (+)
RNA-Seq ExpressionMELO3C012732
SyntenyMELO3C012732
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTACGGCCGCGACGAAAGGACGTTGGAGTTGCGAAACCGACGACGACGGAGACAAAGACGGGTGACCATCACAGAGACGGAGACGGAGATGGAGACAGAGGCGGAGACGGAGACGCGTGCGAAAGAGAAAGGTGGAGAGACGGCGGCGTGAAGATGAAGAAGGAGAAGACGAAGCGGAAGAGGCG

mRNA sequence

ATGGTACGGCCGCGACGAAAGGACGTTGGAGTTGCGAAACCGACGACGACGGAGACAAAGACGGGTGACCATCACAGAGACGGAGACGGAGATGGAGACAGAGGCGGAGACGGAGACGCGTGCGAAAGAGAAAGGTGGAGAGACGGCGGCGTGAAGATGAAGAAGGAGAAGACGAAGCGGAAGAGGCG

Coding sequence (CDS)

ATGGTACGGCCGCGACGAAAGGACGTTGGAGTTGCGAAACCGACGACGACGGAGACAAAGACGGGTGACCATCACAGAGACGGAGACGGAGATGGAGACAGAGGCGGAGACGGAGACGCGTGCGAAAGAGAAAGGTGGAGAGACGGCGGCGTGAAGATGAAGAAGGAGAAGACGAAGCGGAAGAGG

Protein sequence

MVRPRRKDVGVAKPTTTETKTGDHHRDGDGDGDRGGDGDACERERWRDGGVKMKKEKTKRKR
Homology
[Close]
BLAST of MELO3C012732 vs. NCBI nr
Match: ADN34159.1 (NBS-LRR type resistance protein [Cucumis melo subsp. melo])

HSP 1 Score: 123.6 bits (309), Expect = 5.8e-25
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1   MVRPRRKDVGVAKPTTTETKTGDHHRDGDGDGDRGGDGDACERERWRDGGVKMKKEKTKR 60
           MVRPRRKDVGVAKPTTTETKTGDHHRDGDGDGDRGGDGDACERERWRDGGVKMKKEKTKR
Sbjct: 254 MVRPRRKDVGVAKPTTTETKTGDHHRDGDGDGDRGGDGDACERERWRDGGVKMKKEKTKR 313

Query: 61  KR 63
           KR
Sbjct: 314 KR 315

[Close]
BLAST of MELO3C012732 vs. ExPASy TrEMBL
Match: E5GCG0 (NBS-LRR type resistance protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.8e-25
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1   MVRPRRKDVGVAKPTTTETKTGDHHRDGDGDGDRGGDGDACERERWRDGGVKMKKEKTKR 60
           MVRPRRKDVGVAKPTTTETKTGDHHRDGDGDGDRGGDGDACERERWRDGGVKMKKEKTKR
Sbjct: 254 MVRPRRKDVGVAKPTTTETKTGDHHRDGDGDGDRGGDGDACERERWRDGGVKMKKEKTKR 313

Query: 61  KR 63
           KR
Sbjct: 314 KR 315

The following BLAST results are available for this feature:
BLAST of MELO3C012732 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN34159.15.8e-25100.00NBS-LRR type resistance protein [Cucumis melo subsp. melo][more]
BLAST of MELO3C012732 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C012732 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
E5GCG02.8e-25100.00NBS-LRR type resistance protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
BLAST of MELO3C012732 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..62

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C012732.1MELO3C012732.1mRNA