MELO3C012724 (gene) Melon (DHL92) v4

Overview
NameMELO3C012724
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionAAI domain-containing protein
Locationchr01: 22270594 .. 22271595 (+)
RNA-Seq ExpressionMELO3C012724
SyntenyMELO3C012724
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATTTCTAATCTCCCATCATATTCACATACAAACACAAACAATAACAAACCAAACTTTTCTACCTACTCACAATGGAGATGGCTTTAAAGGTGAAGATAACGGCGGTGGTGATATTGGTTGGCATAGCAGGAATATCCATAGCGATGGAAATGTGCGGCGTAGACGAGGAGGGTCTCACGGCATGTAAGCCGTGGGTAACGAAACCATGCCCGACCGAGATGCCACCGGCCACTTGTTGCAATAAGCTCTCCAATGCCGACTTTAGTTGCTTTTGCAAATATAAGAACTCAATGTTGCTATCCTCATTTGGGATTGATCCTGACCTTGCTCTTGCTTTGCCAGTTAAATGCAACATTACTAACACTCCAACTTGCTCTAGTTAAAGCTTGAGCAAAATAAATATTTATGAGGTTTGGATTTTGTTTATTTTAATTCTCCTAATTCTATTATGTATAATTATTTGAGTTTAGTTTTTTTTCTTTGAAAATTTTCAATCTCATTTTTTAACGGAAAGTTGAAGTTGTAGGATATTCTTTATGTTCCGTTTTGTTATATATATATACATTTTCTTGTTTACGTTTTTAGAAGAATAAAAGAATTTTGAAAATGAAAGTTAAAAATTGTTTTTTTTATTTTATTTTATTTTATTTTATTTTATTTTCTTTTATGAAAAATGGACTAAAACTTAAAATGTTTATATATATAAATATGTTTGTATTTGTTTGATTGTGTGTGTTGTTTGTGCAGTGTGTAAGTGGAAGTGGAAGTGGAAGTGGAATGGGAGAAGACCATCATATATTGGGCCTCACTTATCTTATGTTTAATTCTATTTCATTTCTTTTTCTACTTTTAAAAGAAAATGTAATTTTCTAATTTTCTAATTTTCTAATTTTCTAATTTTCTAATTTTATTTCCATCATTACATTTACTACGATGATGAATTGTAATGGTAATCGGTACTTTATCCACTTCATGCTTCACTATTCTAATTTTACTTTC

mRNA sequence

AAAATTTCTAATCTCCCATCATATTCACATACAAACACAAACAATAACAAACCAAACTTTTCTACCTACTCACAATGGAGATGGCTTTAAAGGTGAAGATAACGGCGGTGGTGATATTGGTTGGCATAGCAGGAATATCCATAGCGATGGAAATGTGCGGCGTAGACGAGGAGGGTCTCACGGCATGTAAGCCGTGGGTAACGAAACCATGCCCGACCGAGATGCCACCGGCCACTTGTTGCAATAAGCTCTCCAATGCCGACTTTAGTTGCTTTTGCAAATATAAGAACTCAATGTTGCTATCCTCATTTGGGATTGATCCTGACCTTGCTCTTGCTTTGCCAGTTAAATGCAACATTACTAACACTCCAACTTGCTCTAGTTAAAGCTTGAGCAAAATAAATATTTATGAGTGTGTAAGTGGAAGTGGAAGTGGAAGTGGAATGGGAGAAGACCATCATATATTGGGCCTCACTTATCTTATGTTTAATTCTATTTCATTTCTTTTTCTACTTTTAAAAGAAAATGTAATTTTCTAATTTTCTAATTTTCTAATTTTCTAATTTTCTAATTTTATTTCCATCATTACATTTACTACGATGATGAATTGTAATGGTAATCGGTACTTTATCCACTTCATGCTTCACTATTCTAATTTTACTTTC

Coding sequence (CDS)

ATGGAGATGGCTTTAAAGGTGAAGATAACGGCGGTGGTGATATTGGTTGGCATAGCAGGAATATCCATAGCGATGGAAATGTGCGGCGTAGACGAGGAGGGTCTCACGGCATGTAAGCCGTGGGTAACGAAACCATGCCCGACCGAGATGCCACCGGCCACTTGTTGCAATAAGCTCTCCAATGCCGACTTTAGTTGCTTTTGCAAATATAAGAACTCAATGTTGCTATCCTCATTTGGGATTGATCCTGACCTTGCTCTTGCTTTGCCAGTTAAATGCAACATTACTAACACTCCAACTTGCTCTAGTTAA

Protein sequence

MEMALKVKITAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLSNADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTCSS
Homology
[Close]
BLAST of MELO3C012724 vs. NCBI nr
Match: XP_008447223.1 (PREDICTED: putative lipid-transfer protein DIR1 [Cucumis melo])

HSP 1 Score: 211.1 bits (536), Expect = 4.6e-51
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MEMALKVKITAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS 60
           MEMALKVKITAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS
Sbjct: 1   MEMALKVKITAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS 60

Query: 61  NADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTCSS 104
           NADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTCSS
Sbjct: 61  NADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTCSS 103

[Close]
BLAST of MELO3C012724 vs. NCBI nr
Match: KAA0041998.1 (putative lipid-transfer protein DIR1 [Cucumis melo var. makuwa] >TYK17933.1 putative lipid-transfer protein DIR1 [Cucumis melo var. makuwa])

HSP 1 Score: 208.8 bits (530), Expect = 2.3e-50
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0 

Query: 1   MEMALKVKITAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS 60
           MEMALKVKI AVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS
Sbjct: 1   MEMALKVKIMAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS 60

Query: 61  NADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTCSS 104
           NADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTCSS
Sbjct: 61  NADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTCSS 103

[Close]
BLAST of MELO3C012724 vs. NCBI nr
Match: KAE8646276.1 (hypothetical protein Csa_016013 [Cucumis sativus])

HSP 1 Score: 185.7 bits (470), Expect = 2.1e-43
Identity = 88/103 (85.44%), Postives = 94/103 (91.26%), Query Frame = 0 

Query: 1   MEMALKVKITAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS 60
           MEMA KV +  V+ILVG+AGISIAME+CGVDE+GLTACKPWVTKPCP EMPPA CCNKLS
Sbjct: 29  MEMAQKVTVMVVLILVGLAGISIAMEVCGVDEDGLTACKPWVTKPCPAEMPPAACCNKLS 88

Query: 61  NADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTCSS 104
           NADF CFCKYKNSMLLSSFGID DLALALPVKCNI NTPTCS+
Sbjct: 89  NADFDCFCKYKNSMLLSSFGIDSDLALALPVKCNIPNTPTCST 131

[Close]
BLAST of MELO3C012724 vs. NCBI nr
Match: XP_022156089.1 (putative lipid-transfer protein DIR1 [Momordica charantia])

HSP 1 Score: 137.5 bits (345), Expect = 6.5e-29
Identity = 65/103 (63.11%), Postives = 77/103 (74.76%), Query Frame = 0 

Query: 1   MEMALKVK--ITAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNK 60
           MEM   V     AV +LV +AGIS A+ +CGVDE+GLTACKPWVTKPCPT+ PP  CCN 
Sbjct: 1   MEMTRTVAALAVAVAVLVSLAGISGAVNVCGVDEDGLTACKPWVTKPCPTDPPPVACCNG 60

Query: 61  LSNADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTC 102
           LS ADF CFC YKNS++L S GI+P+LALALP KC + + P C
Sbjct: 61  LSKADFGCFCNYKNSLVLPSLGIEPNLALALPAKCGLPSAPPC 103

[Close]
BLAST of MELO3C012724 vs. NCBI nr
Match: KAG6593049.1 (putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 136.0 bits (341), Expect = 1.9e-28
Identity = 61/101 (60.40%), Postives = 80/101 (79.21%), Query Frame = 0 

Query: 1   MEMALKVKITAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS 60
           M MA+ +    +V+LV ++G    M++CGV ++GLTACKPWVTKPCPTE+PPA CC+ LS
Sbjct: 1   MTMAMAM---TMVMLVSLSGALAEMDVCGVSQDGLTACKPWVTKPCPTELPPAACCDGLS 60

Query: 61  NADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTC 102
            ADF CFC YK+S++L S GIDPDLALALP KC++ N+P+C
Sbjct: 61  KADFGCFCNYKHSLVLPSLGIDPDLALALPAKCSLPNSPSC 98

[Close]
BLAST of MELO3C012724 vs. ExPASy Swiss-Prot
Match: Q8W453 (Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 8.3e-19
Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = 0 

Query: 4   ALKVKITAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLSNAD 63
           A  V +  +VI+  +   S+A+++CG+ ++ L  CKP V+K  PT  P   CC  L +AD
Sbjct: 6   AAMVMMAMIVIMAMLVDTSVAIDLCGMSQDELNECKPAVSKENPTS-PSQPCCTALQHAD 65

Query: 64  FSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTC 102
           F+C C YKNS  L SFG+DP+LA ALP +C + N PTC
Sbjct: 66  FACLCGYKNSPWLGSFGVDPELASALPKQCGLANAPTC 102

[Close]
BLAST of MELO3C012724 vs. ExPASy TrEMBL
Match: A0A1S3BHS9 (putative lipid-transfer protein DIR1 OS=Cucumis melo OX=3656 GN=LOC103489717 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.2e-51
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MEMALKVKITAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS 60
           MEMALKVKITAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS
Sbjct: 1   MEMALKVKITAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS 60

Query: 61  NADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTCSS 104
           NADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTCSS
Sbjct: 61  NADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTCSS 103

[Close]
BLAST of MELO3C012724 vs. ExPASy TrEMBL
Match: A0A5D3D158 (Putative lipid-transfer protein DIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002300 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.1e-50
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0 

Query: 1   MEMALKVKITAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS 60
           MEMALKVKI AVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS
Sbjct: 1   MEMALKVKIMAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS 60

Query: 61  NADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTCSS 104
           NADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTCSS
Sbjct: 61  NADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTCSS 103

[Close]
BLAST of MELO3C012724 vs. ExPASy TrEMBL
Match: A0A0A0K4Q7 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G372360 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.0e-43
Identity = 88/103 (85.44%), Postives = 94/103 (91.26%), Query Frame = 0 

Query: 1   MEMALKVKITAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS 60
           MEMA KV +  V+ILVG+AGISIAME+CGVDE+GLTACKPWVTKPCP EMPPA CCNKLS
Sbjct: 1   MEMAQKVTVMVVLILVGLAGISIAMEVCGVDEDGLTACKPWVTKPCPAEMPPAACCNKLS 60

Query: 61  NADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTCSS 104
           NADF CFCKYKNSMLLSSFGID DLALALPVKCNI NTPTCS+
Sbjct: 61  NADFDCFCKYKNSMLLSSFGIDSDLALALPVKCNIPNTPTCST 103

[Close]
BLAST of MELO3C012724 vs. ExPASy TrEMBL
Match: A0A6J1DS99 (putative lipid-transfer protein DIR1 OS=Momordica charantia OX=3673 GN=LOC111023061 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.1e-29
Identity = 65/103 (63.11%), Postives = 77/103 (74.76%), Query Frame = 0 

Query: 1   MEMALKVK--ITAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNK 60
           MEM   V     AV +LV +AGIS A+ +CGVDE+GLTACKPWVTKPCPT+ PP  CCN 
Sbjct: 1   MEMTRTVAALAVAVAVLVSLAGISGAVNVCGVDEDGLTACKPWVTKPCPTDPPPVACCNG 60

Query: 61  LSNADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTC 102
           LS ADF CFC YKNS++L S GI+P+LALALP KC + + P C
Sbjct: 61  LSKADFGCFCNYKNSLVLPSLGIEPNLALALPAKCGLPSAPPC 103

[Close]
BLAST of MELO3C012724 vs. ExPASy TrEMBL
Match: A0A6J1JMR4 (putative lipid-transfer protein DIR1 OS=Cucurbita maxima OX=3661 GN=LOC111488290 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 9.1e-29
Identity = 59/95 (62.11%), Postives = 79/95 (83.16%), Query Frame = 0 

Query: 8   KITAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLSNADFSCF 67
           K+  +V++V +A +++A+++CGV+++ L ACKPWV KPCPTE+PPA CC+ LS AD  CF
Sbjct: 7   KVAVIVMVVSLAEMAMAVDVCGVNKDDLKACKPWVMKPCPTELPPAACCDGLSKADLGCF 66

Query: 68  CKYKNSMLLSSFGIDPDLALALPVKCNITNTPTCS 103
           CKYK+SMLLSS GID DLALALP KC++ NTP+CS
Sbjct: 67  CKYKHSMLLSSLGIDLDLALALPAKCSLPNTPSCS 101

[Close]
BLAST of MELO3C012724 vs. TAIR 10
Match: AT5G48485.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 94.4 bits (233), Expect = 5.9e-20
Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = 0 

Query: 4   ALKVKITAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLSNAD 63
           A  V +  +VI+  +   S+A+++CG+ ++ L  CKP V+K  PT  P   CC  L +AD
Sbjct: 6   AAMVMMAMIVIMAMLVDTSVAIDLCGMSQDELNECKPAVSKENPTS-PSQPCCTALQHAD 65

Query: 64  FSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTC 102
           F+C C YKNS  L SFG+DP+LA ALP +C + N PTC
Sbjct: 66  FACLCGYKNSPWLGSFGVDPELASALPKQCGLANAPTC 102

[Close]
BLAST of MELO3C012724 vs. TAIR 10
Match: AT5G48490.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 89.0 bits (219), Expect = 2.5e-18
Identity = 44/98 (44.90%), Postives = 65/98 (66.33%), Query Frame = 0 

Query: 8   KITAVVILVGIAGI----SIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLSNAD 67
           K+  +VI++ +A +    S+A+++CG+ +  L  C P V+K  PT  P   CCN L +AD
Sbjct: 5   KVAIMVIVMVMASLVVERSVAIDLCGMTQAELNECLPAVSKNNPTS-PSLLCCNALKHAD 64

Query: 68  FSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTC 102
           ++C C YKNS  L SFG+DP LA +LP +C++TN PTC
Sbjct: 65  YTCLCGYKNSPWLGSFGVDPKLASSLPKECDLTNAPTC 101

The following BLAST results are available for this feature:
BLAST of MELO3C012724 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008447223.14.6e-51100.00PREDICTED: putative lipid-transfer protein DIR1 [Cucumis melo][more]
KAA0041998.12.3e-5099.03putative lipid-transfer protein DIR1 [Cucumis melo var. makuwa] >TYK17933.1 puta... [more]
KAE8646276.12.1e-4385.44hypothetical protein Csa_016013 [Cucumis sativus][more]
XP_022156089.16.5e-2963.11putative lipid-transfer protein DIR1 [Momordica charantia][more]
KAG6593049.11.9e-2860.40putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. sor... [more]
BLAST of MELO3C012724 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8W4538.3e-1945.92Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=... [more]
BLAST of MELO3C012724 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BHS92.2e-51100.00putative lipid-transfer protein DIR1 OS=Cucumis melo OX=3656 GN=LOC103489717 PE=... [more]
A0A5D3D1581.1e-5099.03Putative lipid-transfer protein DIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A0A0K4Q71.0e-4385.44AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G372360 PE=4 SV... [more]
A0A6J1DS993.1e-2963.11putative lipid-transfer protein DIR1 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1JMR49.1e-2962.11putative lipid-transfer protein DIR1 OS=Cucurbita maxima OX=3661 GN=LOC111488290... [more]
BLAST of MELO3C012724 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G48485.15.9e-2045.92Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT5G48490.12.5e-1844.90Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 38..101
e-value: 2.1E-4
score: 30.6
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 18..101
e-value: 3.4E-10
score: 39.9
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilyGENE3D1.10.110.10coord: 24..101
e-value: 1.6E-19
score: 71.5
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 28..102
IPR039265Putative lipid-transfer protein DIR1-likePANTHERPTHR33122LIPID BINDING PROTEIN-RELATEDcoord: 6..101
NoneNo IPR availablePANTHERPTHR33122:SF63BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEINcoord: 6..101
IPR044741Non-specific lipid-transfer protein-likeCDDcd04660nsLTP_likecoord: 28..100
e-value: 2.33107E-14
score: 60.4606

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C012724.1MELO3C012724.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009627 systemic acquired resistance
molecular_function GO:0005504 fatty acid binding