MELO3C012715 (gene) Melon (DHL92) v4

Overview


Name	MELO3C012715
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	mediator of RNA polymerase II transcription subunit 19a-like
Location	chr01: 22088111 .. 22095751 (+)
RNA-Seq Expression	MELO3C012715
Synteny	MELO3C012715

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGAAAGGGAAGGAAAGGAAAGGGGGAAGTTGCAAGGGAAGCCCTTGACCATTTGTATTAAAAGTCCACTGTACGGTCCATTTGTAGATGTGGCAAAGGGTTATTTGCAGTATTATTCACTGCCCCTCTTCTCTTCTTCTCCTCTCTTCTTCCCCGATCTCAATTCTCTCTCTCTCTCTCTCTCTCCCCTCCCTTTTTCTCTCTCCGCCGTTCCCGGCCGCCGGAGCTACTTCTTCACTCTCCTCACACACCATTCTTCAGCCCCTTTTCCCTTCAATTTCATCTCATTCCTCGATTCGATCCTCATCACCCTTTTTTCTCGATCGCTCTTTCAATCCCCTCTCCTTTCCCGGCGCCTCTTTCCTTTTCTTCTACCCTTTCCCGCCAGGTTCGTTTTCTTTTCTTTGTTTCTAGAATGGATTGCTTTTGAGTTGTTTCTGGTTTTAAGCACTGCCCTTTTTCTTTTTTCCCCTCCCCCCTCAATCCCGGGGTTTTCAGTTCTGTGATTGATTGGTGTCTCTAGGGTTTTTTGCTGCCACTCTTGGGTGTTTTGCTGCTTGAGCTGAATTGGGTGTTTCGAATTTTTCGTTTTTTGGTTCTCGTTGAATTTGAAGAAGGAGACGTTTTTTTTGGAGGCTGGGGTTGGGGGTTCTTCTGAAATTATGTTTCCTGCTTGTTTTATTATTGGCTTCGAGTTCAGATGGGTTTGTTGTTTTCTTTTGGATGAGAGTGGTTTTAGCGTGGTCAATAAAGGGATTTGGCTAGTTTCTGTTTTGTCTTCTCGATACAATTCTTTCCAAAATTGTAACCAGTATCTCTTTTAGTTTATGGTTTTTGGATAGATTTTATGGCTCAAATTTTGGATTTGTTGTGTGCAGGATTTGCTAACAAACTTACAAAATGTTCTGGATGTTTTTCTATATTAGATTTTTTTTTTTTTTTTGTAGTGACCCAATTAGTCCTCCAAGTTCTATTAAATTAACTTCTTCTAGTAAAAAAATGGTGGGGTATGCGAGTTTGAACCTCCAACCTCAAGGATGGAGTATTGCTAAGCTACGCTTATGTTGGGCTAATTATATTTACTTCCTCCTTTAAACAAACCGTTTAGTGATAACACATCTTGTATGTATTCATAAATCCTATATATTTTTTTTGTTTTATGAGTATGTCCAATGGAGTTTGCATATTTGTGCGTTATTCCTTTGTTTGACTCGTACGAAAGAAAACCCAGATTTGGTTCACTTCCTTTTTCTTTTTTATAAGCCATGGGTTTTTAGCCTTCTCTGTTTGATTGTTCAAAGCATTTTTATGATTATTGGCTCGGAATTATAATCTCACTACTTTTTGGGGTTTTATGATTGCAGTTATAATGTTACATTGTTCCAAGGAAGAGTGATACATGGAATCTGAAGATAAGAAATTTGGCCGAGGTAACTGTTGATATATTTTGTCAATTTAGTCCCTTCTCCCCTGTACAATGGCATGTTTAAAGAGTGTGGCATTGCTGGGTATATACATTTGATGGTTTTACGTTTAGAAATCTCTAGATGTTTTCTGATGATACTATATTATCCTAAATGACATGCCTTTTTTGGGTGAAAACATGCCCTTGTGTTATCTTCTATGTACCTGAGAACATTATAATCCTTTCCCTGAAAAGATGCCCTTGGGTGAAACCATGTTCTAGTTGTTAACACTTTGCCAACTAGAGACAGACAAAGAGGTCTGCTCTTCTCCTTTCCCTTTATAATCCTTTCCAAACATTGCAAGTTGCAACTGTATTTTGGAGGAGTTGGAGTTGAGTTTTGTATGGGGGTGTAATTCTGACCTGTTCTCTTTTTACTTATCCCTTGGAGGAATTCCTGTCCCCTGTTGGGCCGCTTGGGCCCATATTTTATAGAAGATTCTTGTGAGATTGACTGAGTGGAAAGGGTCACCAATATTTCATGAAGCCATCCTTGCCTCTCATTTCCTTTCTGTCAATGTCTAACTTTCATTAGTTTCTGGAATTGTTTCAGTATATTTCCTATCTTTCTTCTTGATTATATTAACTAAAAGCTCATATTAATCACCTTCAGTGTTCGAATCGTATCATTCTTCTTCTACCCTAAATCTTTTTCTACCACAAAGGAAGATATAGTTGTTAATCTCTTCAATACTGTTAAAACTTTTAAATCTTTCTTCATGTCTGAATTTAGTCTAAGGAACACTAGATGTTGGGAGTGAGCTATGATGACTTGATAGTTCTTTATTTAGTCTCTCTTTTAGGCTTGAGCAATGAAATGGCCACGTCTTACTAAGGTCTTTCTATAACTGGAAGCTCAAAGTGAGACAAGAAAGGACTTTCTGTAATTGAGGACTTGAAGTTTCTTAAATTTTGGATTTTGTACTGAAAAAACTTTGAAACGGAGTGTTCATTGCAGTAAGTGAATGAGTTCTGTACCCAATTTTGAGCTAAACTCTTAGGATTTCTGAGACAGAGTGTTCATTGCAGTTTCCACCTAAAATTGCATATGGTCTATGCCATGCCATGAGAATTTCATTTTAAGATCTTCAAGATTTCTGAAGAGAATGAATCTTTCAAGGTTCTCTGTTTTCTTTAAAGCAATTATGGTTTTTCTCTGCAATGGTTCAATGTTACCTCTGCAGTCCTTCTACCCCCCGGAATAAAATAAAACAATTCTTTCTTCATTTTTGTTTAGTTTTATGAATATAATTACTATAACTTCTTTTGTCTCTTCATGTTGTACATTTTAAATCTTCAATTGATTTTTTCTTATCACTTAGCTTTTTCTTTCTTTTGTTAGTATATTGTTTTTATTGCTTTGATTTCAATGTAATTGAAAGGAACATGGAAGTACAAGTTATACTGTTTTTTGATCCATCTTGTTCATTTTCTATTGATATTTATAATCTTGTCACCTGAATTTCGGTGTATTTTTATTTGTACCTTTAGGACCTAGGGAACTAACTGGTGCTGTGGATCTTATAAGTCACTACAAGTTGTTGCCTCACCATGATTTTTTCTGCAAGAAGTCACTTCCATTGTCAATTTCAGACACACATTATCTTCATAACGTGGTTGGAGACACAGAAATTAGAAAAGGAGAAGGGATGCAGTTGAATCAACTCATACAGAATACTTCTTACCCTAGAGAGACTAATGCCCGTATACAGCCATTTGATCAAGATATTCTCATAGAAGCCTTCCAACTGAGGGAAACTGGTCCTGTTGATCTGCCTTCTGTAAGAAATCTATTATTAGAATTGTTAAAATGAGCCACTTTCTTCAGCTTTCTTCCAGCAGATAGAACTTAGATGTTAACAAGGCAACGGGTCTGATTATCAGCATTTCTCATCCTGATTCTTTTCTCTGCAAGTGATGGGTCCATTTCTTTTTCTTTGGTTAGGCCGAGAAGGGTGTTCCTACTATTCCAGGGAAGTCAAAAAGCGAGTCCAAAGATAAAGACAGAAAGCACAAGAAGCACAAAGATAGGGATAAGGAGAAGGATAGAGAGCATAAGAAGCACAAGCATCGACATAAAGACAGGAGTAAGGATAAAGACAAGGACAAGAAGAAAGACAAAAGTGGCCATCAAGATTCTGGTGCTGATCATTCTAAGAAGCATCATGAAAAGGTTGGAAAACATTTACTCTTTTCCAGCTCCCTTGTAAAATACCAACTACCAAGATTTGATAACAGTGGGATGGTCCAGGGGTAGATTGTCATTGACATTAACATTATGGACTTATCAGTTTATCCCAATTCCTAGTTTGTTGTTAAGGTTACAAGGTTACCCCTTTCACTGATTTTTTTTCTTTTTCTGTTTGATCTAGACTATCAAACCCATAGTTTTGCCCTGAGGCCGGGGAATTGAAAAGTTAATTGATTTGTACCATATTTTCTCTCCTAAAGTAGTCTTTTTGTGTTTCACCACCAAACTAATATACAATTGTTGTGCATGTAGCCAAATAAGCTGGTTCTTAATTTCTAACTTCTCTTAATTTTCAGAAAAGGAAGCACGATGGGGAAGATGATATTAATGACATTCATAGGCACAAAAAAAGTAAGGTAATATGAAGTCCATTTTTTTCAGCTCTAGAATGCTTGCACTGTGGAGCAATTATCCGGGTCAACTTTTATCTTCTTAATCCATGTTTTGACTTTTCAATTTATAGTTATCCTACTAAAAGCCTTCTGCATTTCATTTATGCAGCATAAGGCCTCAAAAATTGAAGAAATGGGAGTGATAAAGGTAGCTGGCTGACATTGTGGAATAATCTAGGTCATTTATTTCCTCGTATGGTTGTAGAAAGATTGGTGGAATTTTCACTTAATGTTGTCAAAAATACTTGAGGTATATTTATATTTTTCAAATATATTATATATTCAATTGTTCTTCATTTGATTAAAGTTTTTTTGCATTCATGGTTTTTTGTCATTTTACTTTTCATTTGGAGATGATTTTTCTTTTAATACGAAACTGGACTTCCATTGAGAAAAATAGATGCACACATAGAAGAAATGAAGTCCAACTAAAAAAGGCAGTCCTAGAACTAACTACAAAAAGTCTGCGAATTTTGAAAAGTTGCTTCGGAATACTGTTGCTCCTATAGGATCGCATACAGAAGCATTGACACCCATCTACCATATAAATTGAAACTTTTTCATTAAGAGTCTACAAAAAGACATCTCAACTATAGTTGGCTACTTAGGAGTATAACTTCAAAATGTGCTGGACTAGGTATCAAAGAGGGTTGGAACTTAGCATGCCCAGTGTCTCCCAGGCTCTATAGAATGCCTTAAAAGAAATTAAGGTTTGTTTTTTTTTTTTTTTTAATTTTTATTTTTTTTTTTAAATTTTAAAATTTATATTTAATAATTATTAATTAATTAATTTTTTTTCTTTTCAAAATGCAAGAGATTCCATGTATTTTTATCTGTTGTATTGTGGAAATTAAGTTGTTTCTCTTCCTCTAGTTTTTTGAAGGGTTCCTGGAAAGTTCCTAGACCAAAGTTCCTTTTTACATTAGATTGCACGAAAGCTTTTTCTCTGGTGTAGTATACTTTAGTGGAGCTTTTGCAGGGTCTGTGGTTAATGATAGTACTGTGTGTGGAAAAGTTATCAATTTGTAGTGGTTTGTAGATTGGAATTGCTTCTCTATCTAGTGGGTTTAGGAGGTAGAAAGGAGGTATTATGGTTTCTGTAGGCATAGGCTTTTACAAGGTTGGGCGGAAGGTCCCGGGGGAATGTTAGGAAAGTTTTGATCGAAGTCTGGTTGTAGAATTTTAGAGCATGTGGGGCCAAAAGATGGTAGAACCAGTGTGTCTGGTTGTTTCAAACAAGACAAGAGAAAAGAAAACTCTCGTTGTAAAGTAGAAAAAGGTCCCAATGATTAAAAAACAATTCTATATCATTGAGCAGTCTAAAACAATTGGATAAGATATTATTTAACTAGCTAACTGAAGCATAACTCAACTACTTAAGACATATTTTGGACCAGAAGACTAGAAGTTAGAATCTCCATCCCAATTTGTGTCGATACCATGGACCGGCTAAGCAAGATGCCCGTGGATTTCTTGATCTCCTTATTGGTGTCGTCTACATCAGAATAGCTTTGAATCAGTGAACCATCTCTTTTTTCGCTGCCAATTTGCTCGTGCTTTATGGACAGAAATTTTCAGTGCCTTTAGATGGAACTTAGCTCTCTCTCGTGACACTATGGAATGGATCCGATTGTGTCTTGGATCATCCCTTCAAGGGTGACTAGGAAAACTTATGGACTAGCTTCAGAAAAAAAAAATGCATCACTGAACTAAGTTACTACCATGGGGTCTAGAGTCGATGGAAAACTCTGGGTGTTAAATTTAAAACCATCCTTCTATATAGGAAACATACTTTAGTTCTCTTTCAACTTTTGCTAGCTGCACCTGTGAGCCTGTGGCCATGGTGGAGTTGCAATACCCAAACTAAAAGACTTGTTATGGAATTGAGAAGGATAAGAGTGGCTGAGAGATGAGGGCGATTAAAGAAGACCAAGCTATTTCAGAGATGAAAAAATTGACATTAATTTTTTATGATATTTTAAATGACCTCTAACATATGTGTGGATATATGTGTGTGTGTGTGTATATACACACACGTATATGCACCTTGGGTATTTTTATGGAATAACCACCTTGACCTTGATTTTGTCTTTTTGATGTATGTGTTTGGAAAAAATGGATTCTAGATTTGTTTAATTAGATAGTGATTTGAAATTTTGTTTATGTATTTATAGGCTTCTTTTGATTCTGAGTTTAGAAATATAGTTCTTTTTCTTCTTAATCTTGGTATGAGTATTGGGTGATTTTCTTTCATCTTTGTCATCTTTGTTGTATGGATTTTTGTCTGATGCTTTAACAATTGGTATTCTCTTAAGATGAAACTTGGAATGCAATCGTAAAGGAGAAGGGACTAAGCATGCGTATTAATTGAATACTAAATCAAGTGCCTAATAAAAAAGGCCGTTATTTGAAGTCTTTCTTTGCTAGGTGTTTCTTTATTCGAGTTTTCTTTTGAAGTGTTTCTGTTTTTTTGTCTTGATTTCTTTGTCATTTGTAGTAATTGTACCTTAATGTCTGTTGTGTTCGCCTGAAGTATGCTACGTTTAGTAGGGCATATATCTTTAGAAATTTGGGGTCAACCGAGTCCAGCCGATACCTCTGCAAACATTTATCTGCTCTTCTCAACCTTTACTTGTAGGGAAGCTAAATCCATTCAGATGGAACATGCTGAAACTACCATTTAAATAAGTTTCTTCACAATTCCATTTGGTAGTATAATGCATGCCTTAGAGACAGTAGTATCCTAGCTGAGCTTTAATTTTTTTCTTATTCTCTTGTCTTTTCATATTTGGTTTTTCCTGGACCCTTTTGAATGTATGATAGTTTTTCTTTCTTCGTGCAGAGTAGCTTCTGATGAGGGTGAATTTACCAGTTTTAGGGTATGTGGAAGCAAATGTAAAAAAGAAAAAAAAAATTGGTGGAATGAACTTTTGTAACATAACAAACAATGGGGTCTGATATATAAATATGAGCGATTTGCAGGACTGGTTGTTTTCCTCAGTTTTCTTTATGGCGTTCATTTGATGGATACCTTCCACATGTAACATTATCTTCTTCTTCTTCATTTCCTAGACTGTTCTTGAGTTGTAGTTTGAAGTAGCATTTCTTCTTCGGTTTTTCAAACGAAGGTAGAAGGCTAGAAAATTATCTCTCCATATCTCATTCTCTCTCTCTCGTTCTCCCTCCCATCATGTTTCTTTTATCGGTATGATTTTTTAACTAACTGAATTCCTTCATAGAATGTAAATAACTAATCAGCCAGGAATATGTGTAATTTTTATTGATGGTATCGGTATCGAAGGGGAAATATGTATAGAAAATGGAATTTGATAATTTATTCTCTCTTTTTAGCTCATACTTCAGTGCTGAAGTGATGGTTTTTGCAGTGATGAGAGTTGAAAATTGTTTATTTTTCTCTTTATTGATTTTCAAGTCTTTGTAACTGTTGGAGGTTCTATAGAAAGATCTTATAATTTACACAAACTTTTGACTGCTCTTTATGCAAATTCTATGCACCTTTGAGTTGTGTAAT

mRNA sequence

AAGGAAAGGGAAGGAAAGGAAAGGGGGAAGTTGCAAGGGAAGCCCTTGACCATTTGTATTAAAAGTCCACTGTACGGTCCATTTGTAGATGTGGCAAAGGGTTATTTGCAGTATTATTCACTGCCCCTCTTCTCTTCTTCTCCTCTCTTCTTCCCCGATCTCAATTCTCTCTCTCTCTCTCTCTCTCCCCTCCCTTTTTCTCTCTCCGCCGTTCCCGGCCGCCGGAGCTACTTCTTCACTCTCCTCACACACCATTCTTCAGCCCCTTTTCCCTTCAATTTCATCTCATTCCTCGATTCGATCCTCATCACCCTTTTTTCTCGATCGCTCTTTCAATCCCCTCTCCTTTCCCGGCGCCTCTTTCCTTTTCTTCTACCCTTTCCCGCCAGAGTGATACATGGAATCTGAAGATAAGAAATTTGGCCGAGTCCCTTCTCCCCTGTACAATGGCATGTTTAAAGAGTGTGGCATTGCTGGGACCTAGGGAACTAACTGGTGCTGTGGATCTTATAAGTCACTACAAGTTGTTGCCTCACCATGATTTTTTCTGCAAGAAGTCACTTCCATTGTCAATTTCAGACACACATTATCTTCATAACGTGGTTGGAGACACAGAAATTAGAAAAGGAGAAGGGATGCAGTTGAATCAACTCATACAGAATACTTCTTACCCTAGAGAGACTAATGCCCGTATACAGCCATTTGATCAAGATATTCTCATAGAAGCCTTCCAACTGAGGGAAACTGGTCCTGTTGATCTGCCTTCTGCCGAGAAGGGTGTTCCTACTATTCCAGGGAAGTCAAAAAGCGAGTCCAAAGATAAAGACAGAAAGCACAAGAAGCACAAAGATAGGGATAAGGAGAAGGATAGAGAGCATAAGAAGCACAAGCATCGACATAAAGACAGGAGTAAGGATAAAGACAAGGACAAGAAGAAAGACAAAAGTGGCCATCAAGATTCTGGTGCTGATCATTCTAAGAAGCATCATGAAAAGAAAAGGAAGCACGATGGGGAAGATGATATTAATGACATTCATAGGCACAAAAAAAGTAAGCATAAGGCCTCAAAAATTGAAGAAATGGGAGTGATAAAGATTGGAATTGCTTCTCTATCTAGTGGGTTTAGGAGAGTAGCTTCTGATGAGGGTGAATTTACCAGTTTTAGGGTATGTGGAAGCAAATGTAAAAAAGAAAAAAAAAATTGGTGGAATGAACTTTTGTAACATAACAAACAATGGGGTCTGATATATAAATATGAGCGATTTGCAGGACTGGTTGTTTTCCTCAGTTTTCTTTATGGCGTTCATTTGATGGATACCTTCCACATGTAACATTATCTTCTTCTTCTTCATTTCCTAGACTGTTCTTGAGTTGTAGTTTGAAGTAGCATTTCTTCTTCGGTTTTTCAAACGAAGGTAGAAGGCTAGAAAATTATCTCTCCATATCTCATTCTCTCTCTCTCGTTCTCCCTCCCATCATGTTTCTTTTATCGGTATGATTTTTTAACTAACTGAATTCCTTCATAGAATGTAAATAACTAATCAGCCAGGAATATGTGTAATTTTTATTGATGGTATCGGTATCGAAGGGGAAATATGTATAGAAAATGGAATTTGATAATTTATTCTCTCTTTTTAGCTCATACTTCAGTGCTGAAGTGATGGTTTTTGCAGTGATGAGAGTTGAAAATTGTTTATTTTTCTCTTTATTGATTTTCAAGTCTTTGTAACTGTTGGAGGTTCTATAGAAAGATCTTATAATTTACACAAACTTTTGACTGCTCTTTATGCAAATTCTATGCACCTTTGAGTTGTGTAAT

Coding sequence (CDS)

ATGGCATGTTTAAAGAGTGTGGCATTGCTGGGACCTAGGGAACTAACTGGTGCTGTGGATCTTATAAGTCACTACAAGTTGTTGCCTCACCATGATTTTTTCTGCAAGAAGTCACTTCCATTGTCAATTTCAGACACACATTATCTTCATAACGTGGTTGGAGACACAGAAATTAGAAAAGGAGAAGGGATGCAGTTGAATCAACTCATACAGAATACTTCTTACCCTAGAGAGACTAATGCCCGTATACAGCCATTTGATCAAGATATTCTCATAGAAGCCTTCCAACTGAGGGAAACTGGTCCTGTTGATCTGCCTTCTGCCGAGAAGGGTGTTCCTACTATTCCAGGGAAGTCAAAAAGCGAGTCCAAAGATAAAGACAGAAAGCACAAGAAGCACAAAGATAGGGATAAGGAGAAGGATAGAGAGCATAAGAAGCACAAGCATCGACATAAAGACAGGAGTAAGGATAAAGACAAGGACAAGAAGAAAGACAAAAGTGGCCATCAAGATTCTGGTGCTGATCATTCTAAGAAGCATCATGAAAAGAAAAGGAAGCACGATGGGGAAGATGATATTAATGACATTCATAGGCACAAAAAAAGTAAGCATAAGGCCTCAAAAATTGAAGAAATGGGAGTGATAAAGATTGGAATTGCTTCTCTATCTAGTGGGTTTAGGAGAGTAGCTTCTGATGAGGGTGAATTTACCAGTTTTAGGGTATGTGGAAGCAAATGTAAAAAAGAAAAAAAAAATTGGTGGAATGAACTTTTGTAA

Protein sequence

MACLKSVALLGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQDSGADHSKKHHEKKRKHDGEDDINDIHRHKKSKHKASKIEEMGVIKIGIASLSSGFRRVASDEGEFTSFRVCGSKCKKEKKNWWNELL

Homology

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BLAST of MELO3C012715 vs. NCBI nr
Match: XP_016900359.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 19a-like [Cucumis melo])

HSP 1 Score: 392.5 bits (1007), Expect = 2.8e-105
Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 11  GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI 70
           GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI
Sbjct: 11  GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI 70

Query: 71  QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH 130
           QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH
Sbjct: 71  QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH 130

Query: 131 KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQDSGADHSKKHHEKKRKHDGE 190
           KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQDSGADHSKKHHEKKRKHDGE
Sbjct: 131 KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQDSGADHSKKHHEKKRKHDGE 190

Query: 191 DDINDIHRHKKSKHKASKIEEMGVIKI 218
           DDINDIHRHKKSKHKASKIEEMGVIK+
Sbjct: 191 DDINDIHRHKKSKHKASKIEEMGVIKV 217

[Close]

BLAST of MELO3C012715 vs. NCBI nr
Match: XP_031744806.1 (mediator of RNA polymerase II transcription subunit 19a [Cucumis sativus] >XP_031744807.1 mediator of RNA polymerase II transcription subunit 19a [Cucumis sativus])

HSP 1 Score: 391.0 bits (1003), Expect = 8.2e-105
Identity = 205/207 (99.03%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 11  GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI 70
           GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI
Sbjct: 11  GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI 70

Query: 71  QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH 130
           QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH
Sbjct: 71  QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH 130

Query: 131 KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQDSGADHSKKHHEKKRKHDGE 190
           KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKK+KSGHQDSGADHSKKHHEKKRKHDGE
Sbjct: 131 KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGE 190

Query: 191 DDINDIHRHKKSKHKASKIEEMGVIKI 218
           DDINDIHRHKKSKHKASKIEEMGVIK+
Sbjct: 191 DDINDIHRHKKSKHKASKIEEMGVIKV 217

[Close]

BLAST of MELO3C012715 vs. NCBI nr
Match: XP_038898851.1 (mediator of RNA polymerase II transcription subunit 19a-like isoform X1 [Benincasa hispida])

HSP 1 Score: 386.3 bits (991), Expect = 2.0e-103
Identity = 202/207 (97.58%), Postives = 204/207 (98.55%), Query Frame = 0


Query: 11  GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI 70
           GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI
Sbjct: 11  GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI 70

Query: 71  QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH 130
           QNTSYPRETNARIQPFDQD+LIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH
Sbjct: 71  QNTSYPRETNARIQPFDQDVLIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH 130

Query: 131 KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQDSGADHSKKHHEKKRKHDGE 190
           KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKS H DSGADHSKKHHEKKRKHDGE
Sbjct: 131 KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSAHHDSGADHSKKHHEKKRKHDGE 190

Query: 191 DDINDIHRHKKSKHKASKIEEMGVIKI 218
           DDINDIHRHKKSKHK SKIEEMGVIK+
Sbjct: 191 DDINDIHRHKKSKHKTSKIEEMGVIKV 217

[Close]

BLAST of MELO3C012715 vs. NCBI nr
Match: XP_022959852.1 (mediator of RNA polymerase II transcription subunit 19a-like [Cucurbita moschata] >KAG6593062.1 Mediator of RNA polymerase II transcription subunit 19a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 379.4 bits (973), Expect = 2.5e-101
Identity = 198/207 (95.65%), Postives = 204/207 (98.55%), Query Frame = 0


Query: 11  GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI 70
           GPRELTGAVDLISHYKLLPHH+FFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI
Sbjct: 11  GPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI 70

Query: 71  QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH 130
           QN SYPRETNARIQPFDQDILIEAFQLRETGPV+LP AEKGVPTIPGKSKSESKDKDRKH
Sbjct: 71  QNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPPAEKGVPTIPGKSKSESKDKDRKH 130

Query: 131 KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQDSGADHSKKHHEKKRKHDGE 190
           KKHKDRDK+KDREHKKHKHRHKDRSKDKDKDKKKDKS HQDSGADHSKKHHEKKRKHDGE
Sbjct: 131 KKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSAHQDSGADHSKKHHEKKRKHDGE 190

Query: 191 DDINDIHRHKKSKHKASKIEEMGVIKI 218
           DDINDIHRHKK+KHKA+KIEEMGVIK+
Sbjct: 191 DDINDIHRHKKNKHKAAKIEEMGVIKV 217

[Close]

BLAST of MELO3C012715 vs. NCBI nr
Match: KAG6576042.1 (Ribonuclease 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 379.4 bits (973), Expect = 2.5e-101
Identity = 206/230 (89.57%), Postives = 210/230 (91.30%), Query Frame = 0


Query: 11  GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI 70
           GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGD EIRKGEGMQLNQLI
Sbjct: 11  GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLI 70

Query: 71  QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH 130
           QNTSY RETNARIQPFDQDILI AFQLRETGPVDLP AEKGV TIPGKS+SESKDKDRKH
Sbjct: 71  QNTSYSRETNARIQPFDQDILIGAFQLRETGPVDLPPAEKGVATIPGKSRSESKDKDRKH 130

Query: 131 KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQDSGADHSKKHHEKKRKHDGE 190
           KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKK+KS HQDSGADHSKKHHEKKRKHDGE
Sbjct: 131 KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGE 190

Query: 191 DDINDIHRHKKSKHKASKIEEMGVIKIGIASL----SSGFRRVASDEGEF 237
           DDINDIHRHKKSKHK SKIEEMGVIK    +        + RVASDEGEF
Sbjct: 191 DDINDIHRHKKSKHKTSKIEEMGVIKKDWWNFHLMCQKKYLRVASDEGEF 240

[Close]

BLAST of MELO3C012715 vs. ExPASy Swiss-Prot
Match: Q9FMP0 (Mediator of RNA polymerase II transcription subunit 19a OS=Arabidopsis thaliana OX=3702 GN=MED19A PE=1 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 7.2e-80
Identity = 158/211 (74.88%), Postives = 186/211 (88.15%), Query Frame = 0


Query: 11  GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI 70
           GPREL GA DLIS +KL+ HH+FFCKKSLP+S+SD+HYLHNVVGDTEIRKGEGMQL+QLI
Sbjct: 10  GPRELCGAADLISQFKLVQHHEFFCKKSLPVSLSDSHYLHNVVGDTEIRKGEGMQLDQLI 69

Query: 71  QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH 130
           ++ S  RETN RIQPFD D L E+FQL +  PV+LP AEKG PTIP KSKSESKD+DRKH
Sbjct: 70  ESISQSRETNIRIQPFDIDELQESFQLNDMTPVELPPAEKGAPTIPSKSKSESKDRDRKH 129

Query: 131 KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDK----KKDKSGHQDSGADHSKKHHEKKRK 190
           KKHKDRDK+KDREHKKHKH+HKDRSKDKDKDK    KKDK+GH DSG DHSKKHH+KKRK
Sbjct: 130 KKHKDRDKDKDREHKKHKHKHKDRSKDKDKDKDRDRKKDKNGHHDSG-DHSKKHHDKKRK 189

Query: 191 HDGEDDINDIHRHKKSKHKASKIEEMGVIKI 218
           HDG++D+ND+ RHKK+KHK+SK++E+G I++
Sbjct: 190 HDGDEDLNDVQRHKKNKHKSSKLDEVGAIRV 219

[Close]

BLAST of MELO3C012715 vs. ExPASy Swiss-Prot
Match: Q6NQD9 (Probable mediator of RNA polymerase II transcription subunit 19b OS=Arabidopsis thaliana OX=3702 GN=MED19B PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 2.7e-66
Identity = 145/212 (68.40%), Postives = 172/212 (81.13%), Query Frame = 0


Query: 5   KSVALLGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGM 64
           +SV   GPREL GA+DLI+ YKLLPHH+FFCK+SLP S+SD HYLHN+VGDTEIRKGEGM
Sbjct: 4   ESVKFGGPRELGGALDLITQYKLLPHHEFFCKRSLPESLSDAHYLHNLVGDTEIRKGEGM 63

Query: 65  QLNQLIQNTSY-PRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSES 124
           QL+QLI N S   R+TNARIQPF  D L EAF+L +T PV+LP AEKG PT   KSKSES
Sbjct: 64  QLDQLIPNASLSSRDTNARIQPFVLDELKEAFELNDTAPVELPPAEKGAPTTVSKSKSES 123

Query: 125 KDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQDSGADHSKKHHEK 184
           KDKDRKH+KHKD+ KEKDREHKKHKH+HKDR KDKDKDK +DK   + SG      HH+K
Sbjct: 124 KDKDRKHRKHKDK-KEKDREHKKHKHKHKDRIKDKDKDKDRDKK-KEKSG------HHDK 183

Query: 185 KRKHDGEDDINDIHRHKKSKHKASKIEEMGVI 216
           KRK++G +D +D+ RHKKSKHK+SK++EMG +
Sbjct: 184 KRKNNGTEDADDVQRHKKSKHKSSKLDEMGAM 207

[Close]

BLAST of MELO3C012715 vs. ExPASy TrEMBL
Match: A0A1S4DWJ4 (mediator of RNA polymerase II transcription subunit 19a-like OS=Cucumis melo OX=3656 GN=LOC103489709 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.4e-105
Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 11  GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI 70
           GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI
Sbjct: 11  GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI 70

Query: 71  QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH 130
           QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH
Sbjct: 71  QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH 130

Query: 131 KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQDSGADHSKKHHEKKRKHDGE 190
           KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQDSGADHSKKHHEKKRKHDGE
Sbjct: 131 KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQDSGADHSKKHHEKKRKHDGE 190

Query: 191 DDINDIHRHKKSKHKASKIEEMGVIKI 218
           DDINDIHRHKKSKHKASKIEEMGVIK+
Sbjct: 191 DDINDIHRHKKSKHKASKIEEMGVIKV 217

[Close]

BLAST of MELO3C012715 vs. ExPASy TrEMBL
Match: A0A0A0K716 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G374560 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 8.8e-105
Identity = 205/206 (99.51%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 11  GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI 70
           GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI
Sbjct: 11  GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI 70

Query: 71  QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH 130
           QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH
Sbjct: 71  QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH 130

Query: 131 KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQDSGADHSKKHHEKKRKHDGE 190
           KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKK+KSGHQDSGADHSKKHHEKKRKHDGE
Sbjct: 131 KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEKKRKHDGE 190

Query: 191 DDINDIHRHKKSKHKASKIEEMGVIK 217
           DDINDIHRHKKSKHKASKIEEMGVIK
Sbjct: 191 DDINDIHRHKKSKHKASKIEEMGVIK 216

[Close]

BLAST of MELO3C012715 vs. ExPASy TrEMBL
Match: A0A6J1H5Q1 (mediator of RNA polymerase II transcription subunit 19a-like OS=Cucurbita moschata OX=3662 GN=LOC111460791 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.2e-101
Identity = 198/207 (95.65%), Postives = 204/207 (98.55%), Query Frame = 0


Query: 11  GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI 70
           GPRELTGAVDLISHYKLLPHH+FFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI
Sbjct: 11  GPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI 70

Query: 71  QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH 130
           QN SYPRETNARIQPFDQDILIEAFQLRETGPV+LP AEKGVPTIPGKSKSESKDKDRKH
Sbjct: 71  QNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPPAEKGVPTIPGKSKSESKDKDRKH 130

Query: 131 KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQDSGADHSKKHHEKKRKHDGE 190
           KKHKDRDK+KDREHKKHKHRHKDRSKDKDKDKKKDKS HQDSGADHSKKHHEKKRKHDGE
Sbjct: 131 KKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSAHQDSGADHSKKHHEKKRKHDGE 190

Query: 191 DDINDIHRHKKSKHKASKIEEMGVIKI 218
           DDINDIHRHKK+KHKA+KIEEMGVIK+
Sbjct: 191 DDINDIHRHKKNKHKAAKIEEMGVIKV 217

[Close]

BLAST of MELO3C012715 vs. ExPASy TrEMBL
Match: A0A6J1CP39 (mediator of RNA polymerase II transcription subunit 19a-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013422 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.6e-101
Identity = 198/207 (95.65%), Postives = 203/207 (98.07%), Query Frame = 0


Query: 11  GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI 70
           GPRELTGAVDLISHYKLLPHH+FFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI
Sbjct: 11  GPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI 70

Query: 71  QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH 130
           QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLP AEKGVPTIPGKSKSESKDK+RKH
Sbjct: 71  QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPPAEKGVPTIPGKSKSESKDKERKH 130

Query: 131 KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQDSGADHSKKHHEKKRKHDGE 190
           KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKK+DKS H +SGADHSKKHHEKKRKHDGE
Sbjct: 131 KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKRDKSAHHESGADHSKKHHEKKRKHDGE 190

Query: 191 DDINDIHRHKKSKHKASKIEEMGVIKI 218
           DDINDIHRHKKSKHK SKIEEMGVIK+
Sbjct: 191 DDINDIHRHKKSKHKTSKIEEMGVIKV 217

[Close]

BLAST of MELO3C012715 vs. ExPASy TrEMBL
Match: A0A6J1KVN1 (mediator of RNA polymerase II transcription subunit 19a-like OS=Cucurbita maxima OX=3661 GN=LOC111498006 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.7e-100
Identity = 195/207 (94.20%), Postives = 203/207 (98.07%), Query Frame = 0


Query: 11  GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI 70
           GPRELTGAVDLISHYKLLPHH+FFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI
Sbjct: 11  GPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI 70

Query: 71  QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH 130
           Q+ SYPRETNARIQPFDQDILIEAFQLRETGPV+LP AEKGVPT+PGKSK ESKDKDRKH
Sbjct: 71  QSPSYPRETNARIQPFDQDILIEAFQLRETGPVELPPAEKGVPTVPGKSKGESKDKDRKH 130

Query: 131 KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQDSGADHSKKHHEKKRKHDGE 190
           KKHKDRDK+KDREHKKHKHRHKDRSKDKDKDKKKDKS HQDSGADHSKKHHEKKRKHDGE
Sbjct: 131 KKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSAHQDSGADHSKKHHEKKRKHDGE 190

Query: 191 DDINDIHRHKKSKHKASKIEEMGVIKI 218
           DDINDIHRHKK+KHKA+KIEEMGVIK+
Sbjct: 191 DDINDIHRHKKNKHKAAKIEEMGVIKV 217

[Close]

BLAST of MELO3C012715 vs. TAIR 10
Match: AT5G12230.1 (MED19A; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19480.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 298.5 bits (763), Expect = 5.1e-81
Identity = 158/211 (74.88%), Postives = 186/211 (88.15%), Query Frame = 0


Query: 11  GPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLI 70
           GPREL GA DLIS +KL+ HH+FFCKKSLP+S+SD+HYLHNVVGDTEIRKGEGMQL+QLI
Sbjct: 10  GPRELCGAADLISQFKLVQHHEFFCKKSLPVSLSDSHYLHNVVGDTEIRKGEGMQLDQLI 69

Query: 71  QNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSESKDKDRKH 130
           ++ S  RETN RIQPFD D L E+FQL +  PV+LP AEKG PTIP KSKSESKD+DRKH
Sbjct: 70  ESISQSRETNIRIQPFDIDELQESFQLNDMTPVELPPAEKGAPTIPSKSKSESKDRDRKH 129

Query: 131 KKHKDRDKEKDREHKKHKHRHKDRSKDKDKDK----KKDKSGHQDSGADHSKKHHEKKRK 190
           KKHKDRDK+KDREHKKHKH+HKDRSKDKDKDK    KKDK+GH DSG DHSKKHH+KKRK
Sbjct: 130 KKHKDRDKDKDREHKKHKHKHKDRSKDKDKDKDRDRKKDKNGHHDSG-DHSKKHHDKKRK 189

Query: 191 HDGEDDINDIHRHKKSKHKASKIEEMGVIKI 218
           HDG++D+ND+ RHKK+KHK+SK++E+G I++
Sbjct: 190 HDGDEDLNDVQRHKKNKHKSSKLDEVGAIRV 219

[Close]

BLAST of MELO3C012715 vs. TAIR 10
Match: AT5G19480.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 253.4 bits (646), Expect = 1.9e-67
Identity = 145/212 (68.40%), Postives = 172/212 (81.13%), Query Frame = 0


Query: 5   KSVALLGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGM 64
           +SV   GPREL GA+DLI+ YKLLPHH+FFCK+SLP S+SD HYLHN+VGDTEIRKGEGM
Sbjct: 4   ESVKFGGPRELGGALDLITQYKLLPHHEFFCKRSLPESLSDAHYLHNLVGDTEIRKGEGM 63

Query: 65  QLNQLIQNTSY-PRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSES 124
           QL+QLI N S   R+TNARIQPF  D L EAF+L +T PV+LP AEKG PT   KSKSES
Sbjct: 64  QLDQLIPNASLSSRDTNARIQPFVLDELKEAFELNDTAPVELPPAEKGAPTTVSKSKSES 123

Query: 125 KDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQDSGADHSKKHHEK 184
           KDKDRKH+KHKD+ KEKDREHKKHKH+HKDR KDKDKDK +DK   + SG      HH+K
Sbjct: 124 KDKDRKHRKHKDK-KEKDREHKKHKHKHKDRIKDKDKDKDRDKK-KEKSG------HHDK 183

Query: 185 KRKHDGEDDINDIHRHKKSKHKASKIEEMGVI 216
           KRK++G +D +D+ RHKKSKHK+SK++EMG +
Sbjct: 184 KRKNNGTEDADDVQRHKKSKHKSSKLDEMGAM 207

[Close]

BLAST of MELO3C012715 vs. TAIR 10
Match: AT5G19480.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12230.1); Has 15754 Blast hits to 7644 proteins in 441 species: Archae - 6; Bacteria - 451; Metazoa - 7628; Fungi - 1448; Plants - 1196; Viruses - 38; Other Eukaryotes - 4987 (source: NCBI BLink). )

HSP 1 Score: 253.4 bits (646), Expect = 1.9e-67
Identity = 145/212 (68.40%), Postives = 172/212 (81.13%), Query Frame = 0


Query: 5   KSVALLGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGM 64
           +SV   GPREL GA+DLI+ YKLLPHH+FFCK+SLP S+SD HYLHN+VGDTEIRKGEGM
Sbjct: 4   ESVKFGGPRELGGALDLITQYKLLPHHEFFCKRSLPESLSDAHYLHNLVGDTEIRKGEGM 63

Query: 65  QLNQLIQNTSY-PRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSES 124
           QL+QLI N S   R+TNARIQPF  D L EAF+L +T PV+LP AEKG PT   KSKSES
Sbjct: 64  QLDQLIPNASLSSRDTNARIQPFVLDELKEAFELNDTAPVELPPAEKGAPTTVSKSKSES 123

Query: 125 KDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKDKSGHQDSGADHSKKHHEK 184
           KDKDRKH+KHKD+ KEKDREHKKHKH+HKDR KDKDKDK +DK   + SG      HH+K
Sbjct: 124 KDKDRKHRKHKDK-KEKDREHKKHKHKHKDRIKDKDKDKDRDKK-KEKSG------HHDK 183

Query: 185 KRKHDGEDDINDIHRHKKSKHKASKIEEMGVI 216
           KRK++G +D +D+ RHKKSKHK+SK++EMG +
Sbjct: 184 KRKNNGTEDADDVQRHKKSKHKSSKLDEMGAM 207

The following BLAST results are available for this feature:

BLAST of MELO3C012715 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900359.1	2.8e-105	99.52	PREDICTED: mediator of RNA polymerase II transcription subunit 19a-like [Cucumis...	[more]
XP_031744806.1	8.2e-105	99.03	mediator of RNA polymerase II transcription subunit 19a [Cucumis sativus] >XP_03...	[more]
XP_038898851.1	2.0e-103	97.58	mediator of RNA polymerase II transcription subunit 19a-like isoform X1 [Beninca...	[more]
XP_022959852.1	2.5e-101	95.65	mediator of RNA polymerase II transcription subunit 19a-like [Cucurbita moschata...	[more]
KAG6576042.1	2.5e-101	89.57	Ribonuclease 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MELO3C012715 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMP0	7.2e-80	74.88	Mediator of RNA polymerase II transcription subunit 19a OS=Arabidopsis thaliana ...	[more]
Q6NQD9	2.7e-66	68.40	Probable mediator of RNA polymerase II transcription subunit 19b OS=Arabidopsis ...	[more]

BLAST of MELO3C012715 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DWJ4	1.4e-105	99.52	mediator of RNA polymerase II transcription subunit 19a-like OS=Cucumis melo OX=...	[more]
A0A0A0K716	8.8e-105	99.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G374560 PE=4 SV=1	[more]
A0A6J1H5Q1	1.2e-101	95.65	mediator of RNA polymerase II transcription subunit 19a-like OS=Cucurbita moscha...	[more]
A0A6J1CP39	1.6e-101	95.65	mediator of RNA polymerase II transcription subunit 19a-like isoform X2 OS=Momor...	[more]
A0A6J1KVN1	1.7e-100	94.20	mediator of RNA polymerase II transcription subunit 19a-like OS=Cucurbita maxima...	[more]

BLAST of MELO3C012715 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12230.1	5.1e-81	74.88	MED19A; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19...	[more]
AT5G19480.1	1.9e-67	68.40	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G19480.2	1.9e-67	68.40	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019403	Mediator complex, subunit Med19, metazoa	PFAM	PF10278	Med19	coord: 11..180 e-value: 3.3E-6 score: 27.2
IPR019403	Mediator complex, subunit Med19, metazoa	PANTHER	PTHR22536	LUNG CANCER METASTASIS-RELATED LCMR1 PROTEIN	coord: 11..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..198
None	No IPR available	PANTHER	PTHR22536:SF4	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 19A-LIKE ISOFORM X1	coord: 11..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012715.1	MELO3C012715.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0003712	transcription coregulator activity