MELO3C012712 (gene) Melon (DHL92) v4

Overview


Name	MELO3C012712
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	NAD(P)H dehydrogenase subunit M
Location	chr01: 22034082 .. 22036066 (-)
RNA-Seq Expression	MELO3C012712
Synteny	MELO3C012712

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGATCTCATTTCATTTGAAAAAAAAGTCAGCCATTCGGAAGGAAAAAAAGGAAAATACTCCAAAACTATAAAACAGAGAAATCAAAACCAACCATTTTCTAAAAGATAGACACCAAAAGAATTCCTCCATGGCAACAGCAGCAGCAGCTTCATCTTACATAATGTTTTCTATGGTGGGTTGGAAAAATGGCAAACAAAACACAAAACACACACTCAGATTTCCCATCTCAGCTCAGCTCAATGAAGCTGCAGAGCAACTAAAAGTTGGAGACCAGGAAGAAGATCAAGAACAGGCAACGCCGAAACCATCGCCGCTGCGACCCGTCGAAGTACAACAGAATGTGAAGAGCAAAAACATGGGAAGAGAGTATGGAGGACAATGGCTTAGCAGTGTGACAAGACATGTAAGAATATATGCAGCTTACATTGACCCGGTTACTTGTGAGTTTGATCAAACTCAAATGGATAAACTTACTCTCATTTTGGATCCAAGTAATGAGTTCCTTTGGAATCCTGAAACTTGCAATAAAGTCTATGCTTACTTCCAAGAGCTTGTGGATCATTATGAGGTACTTTTTCTTTCTCTCTCACTTTTTAGTATTTTAGGATTCTTTGTTATATCAGGGGTTAGCTCTGTGAAAAGTTCAAATCGACGTATTTGTTAATAAAATCGGACTAGCTAATACTATACTAATTGAGCTAAAGAATGTATAAATACGTTGATGTACTTTTATTGATTGTTGTTAGTGCCTATACAAAGGTATGTATGGTTCAATTGACAAAACAACAATTGAAGCCCACAATATTTGACATTGAAATTTTGTAAAATATATTTATATTCTAAGCAGCAATTATAGGATGAAATCATAATACCAAAGCGTAATATTATCTCTTTTATTGCTGGGGTTTATTTGGTTAACTATTTGATTTTGGATTTTTAAAAATAAGTCTTTTTTCTCCCAATTTCTTAGGGTGATTTTCATCTCCTTTAAATAAAAATGTAATTTTTTAGTAAAATTCTAAAAATAAAAATAAAAAACGTAAAAATTACTTTGTTTAGTTTTTAAAACTTGGTTTAACTTTTGAAAACATCAGTAGAAAATAAAAAACAAAACAAAAAATTTAAATGTGAAAAGAGTGTTTATAGGCTTAATGTTTTAGAAATGCAAAAAGTAGATAAGAAATTGAAAATGTAAATATTAAGTAAACAAGATGTTAGTAAACCCGTCGTTAATGAATTTGAAGGCAATAGATTTTTTATCATCGTCCAAATTTTAGTTTGATTCCATTAAATTGATAGACAATCTTTTTCTTTTTAAATACTAAATACAGAGAACATCCTAGTTTTTGGATGTAATATTACTTTGACTTCTCTAGAATGTTTCTAACCTATAACTATGTTTGAAGTATAAATTTGTTGGAATAGTTGGTGAAATTTGGAGCCTACAAAAATAAAAACATTTGACTTGGTATGGATATTGGGACCCAAAGACCCAGGGCATTCCAAGTCATCACCCTACTTGTTTTAGGTCTCATCCAAAATTTCTACTCTAATGATAGAAGGGCAATATTACTGACGTGGCATACACATATTTTGTAACTTAGATCTGTGAAGTTAGTGTGACAATTAAATTATATTGATGACACGTGTGTGTGTTTATTTGTGGAAAGCAGGGAGCTCCATTGACAGAATATACACTTAGGCTAATAGGTTCAGACATAGAACACTACATAAGAAAGATGCTTTATGATGGAGAAATCAAGTACAATATGAATGCAAGGGTCCTCAACTTCAGCATGGGAAAGCCAAGAATTATGTTCAATGCCAACGATCTACCTCAGGATGATCTACAATCACAATGAATATTTTACAAATGTAATTAAATGTTGTCTTCCAAATAGAATCATAAATATTATTCACTTTCGTCTCATTTTGATGCTGCATCAATGCATAAACTCTACAAATTGTAGTTTATACCTTC

mRNA sequence

ATTGGATCTCATTTCATTTGAAAAAAAAGTCAGCCATTCGGAAGGAAAAAAAGGAAAATACTCCAAAACTATAAAACAGAGAAATCAAAACCAACCATTTTCTAAAAGATAGACACCAAAAGAATTCCTCCATGGCAACAGCAGCAGCAGCTTCATCTTACATAATGTTTTCTATGGTGGGTTGGAAAAATGGCAAACAAAACACAAAACACACACTCAGATTTCCCATCTCAGCTCAGCTCAATGAAGCTGCAGAGCAACTAAAAGTTGGAGACCAGGAAGAAGATCAAGAACAGGCAACGCCGAAACCATCGCCGCTGCGACCCGTCGAAGTACAACAGAATGTGAAGAGCAAAAACATGGGAAGAGAGTATGGAGGACAATGGCTTAGCAGTGTGACAAGACATGTAAGAATATATGCAGCTTACATTGACCCGGTTACTTGTGAGTTTGATCAAACTCAAATGGATAAACTTACTCTCATTTTGGATCCAAGTAATGAGTTCCTTTGGAATCCTGAAACTTGCAATAAAGTCTATGCTTACTTCCAAGAGCTTGTGGATCATTATGAGCAGGGAGCTCCATTGACAGAATATACACTTAGGCTAATAGGTTCAGACATAGAACACTACATAAGAAAGATGCTTTATGATGGAGAAATCAAGTACAATATGAATGCAAGGGTCCTCAACTTCAGCATGGGAAAGCCAAGAATTATGTTCAATGCCAACGATCTACCTCAGGATGATCTACAATCACAATGAATATTTTACAAATGTAATTAAATGTTGTCTTCCAAATAGAATCATAAATATTATTCACTTTCGTCTCATTTTGATGCTGCATCAATGCATAAACTCTACAAATTGTAGTTTATACCTTC

Coding sequence (CDS)

ATGGCAACAGCAGCAGCAGCTTCATCTTACATAATGTTTTCTATGGTGGGTTGGAAAAATGGCAAACAAAACACAAAACACACACTCAGATTTCCCATCTCAGCTCAGCTCAATGAAGCTGCAGAGCAACTAAAAGTTGGAGACCAGGAAGAAGATCAAGAACAGGCAACGCCGAAACCATCGCCGCTGCGACCCGTCGAAGTACAACAGAATGTGAAGAGCAAAAACATGGGAAGAGAGTATGGAGGACAATGGCTTAGCAGTGTGACAAGACATGTAAGAATATATGCAGCTTACATTGACCCGGTTACTTGTGAGTTTGATCAAACTCAAATGGATAAACTTACTCTCATTTTGGATCCAAGTAATGAGTTCCTTTGGAATCCTGAAACTTGCAATAAAGTCTATGCTTACTTCCAAGAGCTTGTGGATCATTATGAGCAGGGAGCTCCATTGACAGAATATACACTTAGGCTAATAGGTTCAGACATAGAACACTACATAAGAAAGATGCTTTATGATGGAGAAATCAAGTACAATATGAATGCAAGGGTCCTCAACTTCAGCATGGGAAAGCCAAGAATTATGTTCAATGCCAACGATCTACCTCAGGATGATCTACAATCACAATGA

Protein sequence

MATAAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKPSPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNEFLWNPETCNKVYAYFQELVDHYEQGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNANDLPQDDLQSQ

Homology

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BLAST of MELO3C012712 vs. NCBI nr
Match: XP_008447195.1 (PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis melo] >KAA0041980.1 NAD(P)H-quinone oxidoreductase subunit M [Cucumis melo var. makuwa] >TYK17916.1 NAD(P)H-quinone oxidoreductase subunit M [Cucumis melo var. makuwa])

HSP 1 Score: 422.5 bits (1085), Expect = 2.1e-114
Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MATAAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKP 60
           MATAAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKP
Sbjct: 1   MATAAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKP 60

Query: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILD 120
           SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILD
Sbjct: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILD 120

Query: 121 PSNEFLWNPETCNKVYAYFQELVDHYEQGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYN 180
           PSNEFLWNPETCNKVYAYFQELVDHYE GAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYN
Sbjct: 121 PSNEFLWNPETCNKVYAYFQELVDHYE-GAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYN 180

Query: 181 MNARVLNFSMGKPRIMFNANDLPQDDLQSQ 211
           MNARVLNFSMGKPRIMFNANDLPQDDLQSQ
Sbjct: 181 MNARVLNFSMGKPRIMFNANDLPQDDLQSQ 209

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BLAST of MELO3C012712 vs. NCBI nr
Match: XP_004139803.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis sativus] >KGN44204.1 hypothetical protein Csa_016125 [Cucumis sativus])

HSP 1 Score: 410.2 bits (1053), Expect = 1.1e-110
Identity = 201/210 (95.71%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MATAAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKP 60
           MA AAAASSYIMFSMVGWKNG QNTKHTLRFPISAQ+NEAAEQLK GDQEEDQEQA PKP
Sbjct: 1   MAAAAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKP 60

Query: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILD 120
           SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTL+LD
Sbjct: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLD 120

Query: 121 PSNEFLWNPETCNKVYAYFQELVDHYEQGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYN 180
           PSNEFLWNPETCNKVYAYFQELVDHYE GAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYN
Sbjct: 121 PSNEFLWNPETCNKVYAYFQELVDHYE-GAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYN 180

Query: 181 MNARVLNFSMGKPRIMFNANDLPQDDLQSQ 211
           MNARVLNFSMGKPRIMFNANDLPQDDLQS+
Sbjct: 181 MNARVLNFSMGKPRIMFNANDLPQDDLQSK 209

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BLAST of MELO3C012712 vs. NCBI nr
Match: XP_038899189.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Benincasa hispida])

HSP 1 Score: 369.8 bits (948), Expect = 1.6e-98
Identity = 184/206 (89.32%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 5   AAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKPSPLR 64
           A ASSY++F MVGWKN KQNTK   +FPISAQ+NEAAEQL +GDQ++ +EQ  PKPSPLR
Sbjct: 2   ATASSYMVFPMVGWKNSKQNTKPKPKFPISAQINEAAEQLNLGDQQK-EEQGKPKPSPLR 61

Query: 65  PVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNE 124
           PVE QQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNE
Sbjct: 62  PVEAQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSNE 121

Query: 125 FLWNPETCNKVYAYFQELVDHYEQGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 184
           FLWNP+TCNKVYAYFQELVDHYE GAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR
Sbjct: 122 FLWNPQTCNKVYAYFQELVDHYE-GAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNAR 181

Query: 185 VLNFSMGKPRIMFNANDLPQDDLQSQ 211
           VLNFSMGKPRIMFNANDLPQ DLQSQ
Sbjct: 182 VLNFSMGKPRIMFNANDLPQ-DLQSQ 204

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BLAST of MELO3C012712 vs. NCBI nr
Match: XP_022940621.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita moschata] >XP_023523685.1 NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6607714.1 NAD(P)H-quinone oxidoreductase subunit M, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 367.1 bits (941), Expect = 1.0e-97
Identity = 183/206 (88.83%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 4   AAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKPSPL 63
           A AASSY++FSMVGWKNGKQNT+ + RFPISAQ+NEAAEQLKVG +EE++ +  P PSPL
Sbjct: 2   ATAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVG-EEEEEAKPKPPPSPL 61

Query: 64  RPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 123
           RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN
Sbjct: 62  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 121

Query: 124 EFLWNPETCNKVYAYFQELVDHYEQGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 183
           EFLWNPETCNKVYAYFQELVDHYE GAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA
Sbjct: 122 EFLWNPETCNKVYAYFQELVDHYE-GAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 181

Query: 184 RVLNFSMGKPRIMFNANDLPQDDLQS 210
           RVLNFSMGKPRIMFN+NDLPQ DLQS
Sbjct: 182 RVLNFSMGKPRIMFNSNDLPQ-DLQS 204

[Close]

BLAST of MELO3C012712 vs. NCBI nr
Match: KAG7037286.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 364.8 bits (935), Expect = 5.1e-97
Identity = 185/208 (88.94%), Postives = 194/208 (93.27%), Query Frame = 0


Query: 4   AAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKP--S 63
           A AASSY++FSMVGWKNGKQNT+ + RFPISAQ NEAAEQLKVG   E++E+A PKP  S
Sbjct: 2   ATAASSYMVFSMVGWKNGKQNTRPSARFPISAQNNEAAEQLKVG---EEEEEAKPKPPRS 61

Query: 64  PLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDP 123
           PLRPVE+Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDP
Sbjct: 62  PLRPVEMQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDP 121

Query: 124 SNEFLWNPETCNKVYAYFQELVDHYEQGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 183
           SNEFLWNPETCNKVYAYFQELVDHYE GAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM
Sbjct: 122 SNEFLWNPETCNKVYAYFQELVDHYE-GAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 181

Query: 184 NARVLNFSMGKPRIMFNANDLPQDDLQS 210
           NARVLNFSMGKPRIMFN+NDLPQ DLQS
Sbjct: 182 NARVLNFSMGKPRIMFNSNDLPQ-DLQS 204

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BLAST of MELO3C012712 vs. ExPASy Swiss-Prot
Match: A7NVJ4 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhM PE=2 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 3.0e-76
Identity = 151/208 (72.60%), Postives = 167/208 (80.29%), Query Frame = 0


Query: 1   MATAAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLN-EAAEQLKVGDQEEDQEQATP- 60
           MA  ++ ++   FSM+GW  GK+  +    F ISAQ   E  E  +V  QEE+QE+    
Sbjct: 1   MAATSSYTACTKFSMLGWIGGKRELRKRRAFFISAQQQAEVEESQQVNAQEEEQEKMKQQ 60

Query: 61  -KPSPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTL 120
            K    RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTL
Sbjct: 61  GKQKLPRPVEPQVNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTL 120

Query: 121 ILDPSNEFLWNPETCNKVYAYFQELVDHYEQGAPLTEYTLRLIGSDIEHYIRKMLYDGEI 180
           ILDP+NEF+W  ETCNKVYAYFQELVDHYE GAPLTEYTLRLIGSDIEHYIRK+LYDGEI
Sbjct: 121 ILDPTNEFVWTSETCNKVYAYFQELVDHYE-GAPLTEYTLRLIGSDIEHYIRKLLYDGEI 180

Query: 181 KYNMNARVLNFSMGKPRIMFNANDLPQD 206
           KYNMNARVLNFSMGKPRI+FN + LPQ+
Sbjct: 181 KYNMNARVLNFSMGKPRILFN-DGLPQN 206

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BLAST of MELO3C012712 vs. ExPASy Swiss-Prot
Match: A9PJQ8 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Populus jackii OX=640484 GN=ndhM PE=2 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 7.0e-73
Identity = 143/204 (70.10%), Postives = 161/204 (78.92%), Query Frame = 0


Query: 5   AAASSYI---MFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKPS 64
           AA+SSY+    FSM+GW  G++  K  +R  IS    E AE  +  +    +E+   +P 
Sbjct: 2   AASSSYMACAKFSMLGWLGGRRELK--MRRVISVSPQEQAEVQESQEVNAQEEEKVKQPV 61

Query: 65  PLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDP 124
             RPVE Q NVKSKNMGREYGGQWLSSVTRHVRIYAAYIDP TCEFDQTQ DKLTLILDP
Sbjct: 62  QPRPVEPQVNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPETCEFDQTQTDKLTLILDP 121

Query: 125 SNEFLWNPETCNKVYAYFQELVDHYEQGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 184
           ++EF+W  ETC KVY+YFQELVDHYE GAPLTEYTLRLIGSDIEHYIRK+LYDGEIKYNM
Sbjct: 122 TDEFVWTDETCYKVYSYFQELVDHYE-GAPLTEYTLRLIGSDIEHYIRKLLYDGEIKYNM 181

Query: 185 NARVLNFSMGKPRIMFNANDLPQD 206
           NARVLNFSMGKPRI+FN +   QD
Sbjct: 182 NARVLNFSMGKPRILFNNDGQLQD 202

[Close]

BLAST of MELO3C012712 vs. ExPASy Swiss-Prot
Match: Q2V2S7 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhM PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.8e-65
Identity = 121/165 (73.33%), Postives = 143/165 (86.67%), Query Frame = 0


Query: 49  QEEDQEQATPKPSPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFD 108
           +E+  E+   +P+PLRPVE Q NVKSK MG ++GGQWLSSVTRHVRIYAAYIDP TCEFD
Sbjct: 54  EEQSTEKMKKQPTPLRPVEKQLNVKSKGMG-DFGGQWLSSVTRHVRIYAAYIDPETCEFD 113

Query: 109 QTQMDKLTLILDPSNEFLWNPETCNKVYAYFQELVDHYEQGAPLTEYTLRLIGSDIEHYI 168
           Q+QMDKLTLILDP+ EF+W+ E+CNKVY+YFQELVDHYE GAPLTEYTLRLIGSD+EHYI
Sbjct: 114 QSQMDKLTLILDPTEEFVWDDESCNKVYSYFQELVDHYE-GAPLTEYTLRLIGSDVEHYI 173

Query: 169 RKMLYDGEIKYNMNARVLNFSMGKPRIMFNANDL-------PQDD 207
           RKML+DGEI+YNM+ARVLNFSMGKPR+ FN +++       PQ+D
Sbjct: 174 RKMLFDGEIQYNMDARVLNFSMGKPRVQFNTSNIEGGGDGQPQED 216

[Close]

BLAST of MELO3C012712 vs. ExPASy Swiss-Prot
Match: A2XVZ1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=ndhM PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.2e-58
Identity = 112/166 (67.47%), Postives = 133/166 (80.12%), Query Frame = 0


Query: 40  AAEQLKVGDQEEDQ--EQATPKPSPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYA 99
           A E L    QEE+Q  E+ T +  P +P+ VQ   +SKNM REYGGQWLS  TRH+RIYA
Sbjct: 53  AVENLPPPPQEEEQRRERKTRRQGPAQPLPVQPLAESKNMSREYGGQWLSCTTRHIRIYA 112

Query: 100 AYIDPVTCEFDQTQMDKLTLILDPSNEFLWNPETCNKVYAYFQELVDHYEQGAPLTEYTL 159
           AYI+P T  FDQTQMDKLTL+LDP++EF+W  ETC KVY  FQ+LVDHYE GA L+EYTL
Sbjct: 113 AYINPETNAFDQTQMDKLTLLLDPTDEFVWTDETCQKVYDEFQDLVDHYE-GAELSEYTL 172

Query: 160 RLIGSDIEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNANDLP 204
           RLIGSD+EH+IRK+LYDGEIKYNM +RVLNFSMGKPRI FN++ +P
Sbjct: 173 RLIGSDLEHFIRKLLYDGEIKYNMMSRVLNFSMGKPRIKFNSSQIP 217

[Close]

BLAST of MELO3C012712 vs. ExPASy Swiss-Prot
Match: Q7FB12 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ndhM PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.2e-58
Identity = 112/166 (67.47%), Postives = 133/166 (80.12%), Query Frame = 0


Query: 40  AAEQLKVGDQEEDQ--EQATPKPSPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYA 99
           A E L    QEE+Q  E+ T +  P +P+ VQ   +SKNM REYGGQWLS  TRH+RIYA
Sbjct: 53  AVENLPPPPQEEEQRRERKTRRQGPAQPLPVQPLAESKNMSREYGGQWLSCTTRHIRIYA 112

Query: 100 AYIDPVTCEFDQTQMDKLTLILDPSNEFLWNPETCNKVYAYFQELVDHYEQGAPLTEYTL 159
           AYI+P T  FDQTQMDKLTL+LDP++EF+W  ETC KVY  FQ+LVDHYE GA L+EYTL
Sbjct: 113 AYINPETNAFDQTQMDKLTLLLDPTDEFVWTDETCQKVYDEFQDLVDHYE-GAELSEYTL 172

Query: 160 RLIGSDIEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNANDLP 204
           RLIGSD+EH+IRK+LYDGEIKYNM +RVLNFSMGKPRI FN++ +P
Sbjct: 173 RLIGSDLEHFIRKLLYDGEIKYNMMSRVLNFSMGKPRIKFNSSQIP 217

[Close]

BLAST of MELO3C012712 vs. ExPASy TrEMBL
Match: A0A5D3D3P2 (NAD(P)H dehydrogenase subunit M OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002070 PE=3 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.0e-114
Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MATAAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKP 60
           MATAAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKP
Sbjct: 1   MATAAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKP 60

Query: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILD 120
           SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILD
Sbjct: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILD 120

Query: 121 PSNEFLWNPETCNKVYAYFQELVDHYEQGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYN 180
           PSNEFLWNPETCNKVYAYFQELVDHYE GAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYN
Sbjct: 121 PSNEFLWNPETCNKVYAYFQELVDHYE-GAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYN 180

Query: 181 MNARVLNFSMGKPRIMFNANDLPQDDLQSQ 211
           MNARVLNFSMGKPRIMFNANDLPQDDLQSQ
Sbjct: 181 MNARVLNFSMGKPRIMFNANDLPQDDLQSQ 209

[Close]

BLAST of MELO3C012712 vs. ExPASy TrEMBL
Match: A0A1S3BGV5 (NAD(P)H dehydrogenase subunit M OS=Cucumis melo OX=3656 GN=LOC103489705 PE=3 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.0e-114
Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MATAAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKP 60
           MATAAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKP
Sbjct: 1   MATAAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKP 60

Query: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILD 120
           SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILD
Sbjct: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILD 120

Query: 121 PSNEFLWNPETCNKVYAYFQELVDHYEQGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYN 180
           PSNEFLWNPETCNKVYAYFQELVDHYE GAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYN
Sbjct: 121 PSNEFLWNPETCNKVYAYFQELVDHYE-GAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYN 180

Query: 181 MNARVLNFSMGKPRIMFNANDLPQDDLQSQ 211
           MNARVLNFSMGKPRIMFNANDLPQDDLQSQ
Sbjct: 181 MNARVLNFSMGKPRIMFNANDLPQDDLQSQ 209

[Close]

BLAST of MELO3C012712 vs. ExPASy TrEMBL
Match: A0A0A0K5H1 (NAD(P)H dehydrogenase subunit M OS=Cucumis sativus OX=3659 GN=Csa_7G221360 PE=3 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 5.1e-111
Identity = 201/210 (95.71%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MATAAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKP 60
           MA AAAASSYIMFSMVGWKNG QNTKHTLRFPISAQ+NEAAEQLK GDQEEDQEQA PKP
Sbjct: 1   MAAAAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKP 60

Query: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILD 120
           SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDP+TCEFDQTQMDKLTL+LD
Sbjct: 61  SPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLD 120

Query: 121 PSNEFLWNPETCNKVYAYFQELVDHYEQGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYN 180
           PSNEFLWNPETCNKVYAYFQELVDHYE GAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYN
Sbjct: 121 PSNEFLWNPETCNKVYAYFQELVDHYE-GAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYN 180

Query: 181 MNARVLNFSMGKPRIMFNANDLPQDDLQSQ 211
           MNARVLNFSMGKPRIMFNANDLPQDDLQS+
Sbjct: 181 MNARVLNFSMGKPRIMFNANDLPQDDLQSK 209

[Close]

BLAST of MELO3C012712 vs. ExPASy TrEMBL
Match: A0A6J1FIZ9 (NAD(P)H dehydrogenase subunit M OS=Cucurbita moschata OX=3662 GN=LOC111446160 PE=3 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 5.0e-98
Identity = 183/206 (88.83%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 4   AAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKPSPL 63
           A AASSY++FSMVGWKNGKQNT+ + RFPISAQ+NEAAEQLKVG +EE++ +  P PSPL
Sbjct: 2   ATAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVG-EEEEEAKPKPPPSPL 61

Query: 64  RPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 123
           RPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN
Sbjct: 62  RPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPSN 121

Query: 124 EFLWNPETCNKVYAYFQELVDHYEQGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 183
           EFLWNPETCNKVYAYFQELVDHYE GAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA
Sbjct: 122 EFLWNPETCNKVYAYFQELVDHYE-GAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNA 181

Query: 184 RVLNFSMGKPRIMFNANDLPQDDLQS 210
           RVLNFSMGKPRIMFN+NDLPQ DLQS
Sbjct: 182 RVLNFSMGKPRIMFNSNDLPQ-DLQS 204

[Close]

BLAST of MELO3C012712 vs. ExPASy TrEMBL
Match: A0A6J1IX15 (NAD(P)H dehydrogenase subunit M OS=Cucurbita maxima OX=3661 GN=LOC111480680 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.2e-97
Identity = 184/208 (88.46%), Postives = 193/208 (92.79%), Query Frame = 0


Query: 4   AAAASSYIMFSMVGWKNGKQNTKHTLRFPISAQLNEAAEQLKVGDQEEDQEQATPKP--S 63
           + AASSY++FSMVGWKNGKQNT+ + RFPISAQ+NEAAEQLKVG++EE    A PKP  S
Sbjct: 2   STAASSYMVFSMVGWKNGKQNTRPSARFPISAQINEAAEQLKVGEEEE----AKPKPPLS 61

Query: 64  PLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDP 123
           PLRPVE Q NVKSKNM REYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDP
Sbjct: 62  PLRPVETQPNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDP 121

Query: 124 SNEFLWNPETCNKVYAYFQELVDHYEQGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 183
           SNEFLWNPETCNKVYAYFQELVDHYE GAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM
Sbjct: 122 SNEFLWNPETCNKVYAYFQELVDHYE-GAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNM 181

Query: 184 NARVLNFSMGKPRIMFNANDLPQDDLQS 210
           NARVLNFSMGKPRIMFN+NDLPQ DLQS
Sbjct: 182 NARVLNFSMGKPRIMFNSNDLPQ-DLQS 203

[Close]

BLAST of MELO3C012712 vs. TAIR 10
Match: AT4G37925.1 (subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex )

HSP 1 Score: 250.4 bits (638), Expect = 1.3e-66
Identity = 121/165 (73.33%), Postives = 143/165 (86.67%), Query Frame = 0


Query: 49  QEEDQEQATPKPSPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPVTCEFD 108
           +E+  E+   +P+PLRPVE Q NVKSK MG ++GGQWLSSVTRHVRIYAAYIDP TCEFD
Sbjct: 54  EEQSTEKMKKQPTPLRPVEKQLNVKSKGMG-DFGGQWLSSVTRHVRIYAAYIDPETCEFD 113

Query: 109 QTQMDKLTLILDPSNEFLWNPETCNKVYAYFQELVDHYEQGAPLTEYTLRLIGSDIEHYI 168
           Q+QMDKLTLILDP+ EF+W+ E+CNKVY+YFQELVDHYE GAPLTEYTLRLIGSD+EHYI
Sbjct: 114 QSQMDKLTLILDPTEEFVWDDESCNKVYSYFQELVDHYE-GAPLTEYTLRLIGSDVEHYI 173

Query: 169 RKMLYDGEIKYNMNARVLNFSMGKPRIMFNANDL-------PQDD 207
           RKML+DGEI+YNM+ARVLNFSMGKPR+ FN +++       PQ+D
Sbjct: 174 RKMLFDGEIQYNMDARVLNFSMGKPRVQFNTSNIEGGGDGQPQED 216

The following BLAST results are available for this feature:

BLAST of MELO3C012712 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447195.1	2.1e-114	99.52	PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis melo...	[more]
XP_004139803.1	1.1e-110	95.71	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis sativus] >KGN44...	[more]
XP_038899189.1	1.6e-98	89.32	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Benincasa hispida]	[more]
XP_022940621.1	1.0e-97	88.83	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita moschata] >XP...	[more]
KAG7037286.1	5.1e-97	88.94	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic, partial [Cucurbita argy...	[more]

BLAST of MELO3C012712 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7NVJ4	3.0e-76	72.60	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Vitis vinifera OX=297...	[more]
A9PJQ8	7.0e-73	70.10	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Populus jackii OX=640...	[more]
Q2V2S7	1.8e-65	73.33	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Arabidopsis thaliana ...	[more]
A2XVZ1	2.2e-58	67.47	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. i...	[more]
Q7FB12	2.2e-58	67.47	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. j...	[more]

BLAST of MELO3C012712 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D3P2	1.0e-114	99.52	NAD(P)H dehydrogenase subunit M OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BGV5	1.0e-114	99.52	NAD(P)H dehydrogenase subunit M OS=Cucumis melo OX=3656 GN=LOC103489705 PE=3 SV=...	[more]
A0A0A0K5H1	5.1e-111	95.71	NAD(P)H dehydrogenase subunit M OS=Cucumis sativus OX=3659 GN=Csa_7G221360 PE=3 ...	[more]
A0A6J1FIZ9	5.0e-98	88.83	NAD(P)H dehydrogenase subunit M OS=Cucurbita moschata OX=3662 GN=LOC111446160 PE...	[more]
A0A6J1IX15	3.2e-97	88.46	NAD(P)H dehydrogenase subunit M OS=Cucurbita maxima OX=3661 GN=LOC111480680 PE=3...	[more]

BLAST of MELO3C012712 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37925.1	1.3e-66	73.33	subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018922	NAD(P)H-quinone oxidoreductase subunit M	PFAM	PF10664	NdhM	coord: 86..195 e-value: 4.6E-44 score: 149.1
IPR018922	NAD(P)H-quinone oxidoreductase subunit M	PANTHER	PTHR36900	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT M, CHLOROPLASTIC	coord: 1..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012712.1	MELO3C012712.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor