MELO3C012685 (gene) Melon (DHL92) v4

Overview


Name	MELO3C012685
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr01: 21371112 .. 21371543 (+)
RNA-Seq Expression	MELO3C012685
Synteny	MELO3C012685

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTACATTACATCAAAACAAGGAGAAAGACTGTTGCCTGAAGACGTTGGGTCAAACTAAAGACCTTAAAGGAGATGAAGATGATGACGAGCTGCCCCTAATTCTGCCACTAAAAGGAAATGGCGGATCAACCTCTAAACAGCTTGCAAAGAAACCAAAGGTTGATGAGATCCCCAACCCTAAGCCTCTCAAAGTCATACATCCCCTCACCAATAAGATCCTCCTTGCCCCAAGAAAGGTCTCCAACATCCTCCCCCCGAGGAAAGTGTCTTTACTTCCCGCTTCTACTAAGCTTCAAAGGAAAAATCTTCTCCTCTTCATCACAAAGACAAACGTCTCCTCCTCTTCCAAAAGATCAAATTCCTCCTCCACTGCCTCAAAAAGATCCACCTCCCCGTATTTGTTTGATTTTACGTTCTTCTCTTTGTAG

mRNA sequence

ATGATTACATTACATCAAAACAAGGAGAAAGACTGTTGCCTGAAGACGTTGGGTCAAACTAAAGACCTTAAAGGAGATGAAGATGATGACGAGCTGCCCCTAATTCTGCCACTAAAAGGAAATGGCGGATCAACCTCTAAACAGCTTGCAAAGAAACCAAAGGTTGATGAGATCCCCAACCCTAAGCCTCTCAAAGTCATACATCCCCTCACCAATAAGATCCTCCTTGCCCCAAGAAAGGTCTCCAACATCCTCCCCCCGAGGAAAGTGTCTTTACTTCCCGCTTCTACTAAGCTTCAAAGGAAAAATCTTCTCCTCTTCATCACAAAGACAAACGTCTCCTCCTCTTCCAAAAGATCAAATTCCTCCTCCACTGCCTCAAAAAGATCCACCTCCCCGTATTTGTTTGATTTTACGTTCTTCTCTTTGTAG

Coding sequence (CDS)

ATGATTACATTACATCAAAACAAGGAGAAAGACTGTTGCCTGAAGACGTTGGGTCAAACTAAAGACCTTAAAGGAGATGAAGATGATGACGAGCTGCCCCTAATTCTGCCACTAAAAGGAAATGGCGGATCAACCTCTAAACAGCTTGCAAAGAAACCAAAGGTTGATGAGATCCCCAACCCTAAGCCTCTCAAAGTCATACATCCCCTCACCAATAAGATCCTCCTTGCCCCAAGAAAGGTCTCCAACATCCTCCCCCCGAGGAAAGTGTCTTTACTTCCCGCTTCTACTAAGCTTCAAAGGAAAAATCTTCTCCTCTTCATCACAAAGACAAACGTCTCCTCCTCTTCCAAAAGATCAAATTCCTCCTCCACTGCCTCAAAAAGATCCACCTCCCCGTATTTGTTTGATTTTACGTTCTTCTCTTTGTAG

Protein sequence

MITLHQNKEKDCCLKTLGQTKDLKGDEDDDELPLILPLKGNGGSTSKQLAKKPKVDEIPNPKPLKVIHPLTNKILLAPRKVSNILPPRKVSLLPASTKLQRKNLLLFITKTNVSSSSKRSNSSSTASKRSTSPYLFDFTFFSL

Homology

[Close]

BLAST of MELO3C012685 vs. NCBI nr
Match: KAA0035596.1 (hypothetical protein E6C27_scaffold285G002700 [Cucumis melo var. makuwa])

HSP 1 Score: 74.7 bits (182), Expect = 7.2e-10
Identity = 44/79 (55.70%), Postives = 53/79 (67.09%), Query Frame = 0


Query: 15  KTLGQTKDLKGDEDDDELPLILPLKGNGGSTSKQLAKKPKVDEIPNPKPLKVIHPLTNKI 74
           +TLGQ KDL+ D+ +DELP   P K  G STS+ L KK KVD   + KPLKVIHPL    
Sbjct: 86  ETLGQPKDLEEDK-EDELPPTQPQKRKGASTSRPLTKKTKVDGTLHHKPLKVIHPLAKMF 145

Query: 75  LLAPRKVSNILPPRKVSLL 94
           +L PRK SNI   +KVS+L
Sbjct: 146 VLTPRKSSNIFLMKKVSIL 163

[Close]

BLAST of MELO3C012685 vs. NCBI nr
Match: TYK30940.1 (hypothetical protein E5676_scaffold455G001650 [Cucumis melo var. makuwa])

HSP 1 Score: 74.7 bits (182), Expect = 7.2e-10
Identity = 44/79 (55.70%), Postives = 53/79 (67.09%), Query Frame = 0


Query: 15  KTLGQTKDLKGDEDDDELPLILPLKGNGGSTSKQLAKKPKVDEIPNPKPLKVIHPLTNKI 74
           +TLGQ KDL+ D+ +DELP   P K  G STS+ L KK KVD   + KPLKVIHPL    
Sbjct: 62  ETLGQPKDLEEDK-EDELPPTQPQKRKGASTSRPLTKKTKVDGTLHHKPLKVIHPLAKMF 121

Query: 75  LLAPRKVSNILPPRKVSLL 94
           +L PRK SNI   +KVS+L
Sbjct: 122 VLTPRKSSNIFLMKKVSIL 139

[Close]

BLAST of MELO3C012685 vs. NCBI nr
Match: TYJ97633.1 (hypothetical protein E5676_scaffold469G00170 [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 3.7e-06
Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 0


Query: 1   MITLHQNKEKDCCLKTLGQTKDLKGDEDDDELPLILPLKGNGGSTSKQLAKKPKVD 57
           +IT HQNKE++  LKTLG  K+ KG ED ++LPL LP+K    STS QL KK KVD
Sbjct: 197 VITFHQNKEEEYHLKTLGHEKEPKGMEDKEDLPLPLPMKRTIASTSMQLGKKLKVD 252

[Close]

BLAST of MELO3C012685 vs. NCBI nr
Match: KAA0053237.1 (hypothetical protein E6C27_scaffold102G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 61.2 bits (147), Expect = 8.2e-06
Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 0


Query: 1   MITLHQNKEKDCCLKTLGQTKDLKGDEDDDELPLILPLKGNGGSTSKQLAKKPKVD 57
           +IT HQNKE++  LKTLG  K+ +G ED ++LPL LP+K    STS QL KK KVD
Sbjct: 197 VITFHQNKEEEYHLKTLGHEKEPEGMEDKEDLPLSLPMKRTIASTSMQLGKKLKVD 252

[Close]

BLAST of MELO3C012685 vs. ExPASy TrEMBL
Match: A0A5D3E5P6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001650 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.5e-10
Identity = 44/79 (55.70%), Postives = 53/79 (67.09%), Query Frame = 0


Query: 15  KTLGQTKDLKGDEDDDELPLILPLKGNGGSTSKQLAKKPKVDEIPNPKPLKVIHPLTNKI 74
           +TLGQ KDL+ D+ +DELP   P K  G STS+ L KK KVD   + KPLKVIHPL    
Sbjct: 62  ETLGQPKDLEEDK-EDELPPTQPQKRKGASTSRPLTKKTKVDGTLHHKPLKVIHPLAKMF 121

Query: 75  LLAPRKVSNILPPRKVSLL 94
           +L PRK SNI   +KVS+L
Sbjct: 122 VLTPRKSSNIFLMKKVSIL 139

[Close]

BLAST of MELO3C012685 vs. ExPASy TrEMBL
Match: A0A5A7T079 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G002700 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.5e-10
Identity = 44/79 (55.70%), Postives = 53/79 (67.09%), Query Frame = 0


Query: 15  KTLGQTKDLKGDEDDDELPLILPLKGNGGSTSKQLAKKPKVDEIPNPKPLKVIHPLTNKI 74
           +TLGQ KDL+ D+ +DELP   P K  G STS+ L KK KVD   + KPLKVIHPL    
Sbjct: 86  ETLGQPKDLEEDK-EDELPPTQPQKRKGASTSRPLTKKTKVDGTLHHKPLKVIHPLAKMF 145

Query: 75  LLAPRKVSNILPPRKVSLL 94
           +L PRK SNI   +KVS+L
Sbjct: 146 VLTPRKSSNIFLMKKVSIL 163

[Close]

BLAST of MELO3C012685 vs. ExPASy TrEMBL
Match: A0A5D3BEA4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold469G00170 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.8e-06
Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 0


Query: 1   MITLHQNKEKDCCLKTLGQTKDLKGDEDDDELPLILPLKGNGGSTSKQLAKKPKVD 57
           +IT HQNKE++  LKTLG  K+ KG ED ++LPL LP+K    STS QL KK KVD
Sbjct: 197 VITFHQNKEEEYHLKTLGHEKEPKGMEDKEDLPLPLPMKRTIASTSMQLGKKLKVD 252

[Close]

BLAST of MELO3C012685 vs. ExPASy TrEMBL
Match: A0A5A7UFG4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00220 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 4.0e-06
Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 0


Query: 1   MITLHQNKEKDCCLKTLGQTKDLKGDEDDDELPLILPLKGNGGSTSKQLAKKPKVD 57
           +IT HQNKE++  LKTLG  K+ +G ED ++LPL LP+K    STS QL KK KVD
Sbjct: 197 VITFHQNKEEEYHLKTLGHEKEPEGMEDKEDLPLSLPMKRTIASTSMQLGKKLKVD 252

The following BLAST results are available for this feature:

BLAST of MELO3C012685 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035596.1	7.2e-10	55.70	hypothetical protein E6C27_scaffold285G002700 [Cucumis melo var. makuwa]	[more]
TYK30940.1	7.2e-10	55.70	hypothetical protein E5676_scaffold455G001650 [Cucumis melo var. makuwa]	[more]
TYJ97633.1	3.7e-06	58.93	hypothetical protein E5676_scaffold469G00170 [Cucumis melo var. makuwa]	[more]
KAA0053237.1	8.2e-06	57.14	hypothetical protein E6C27_scaffold102G00220 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C012685 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C012685 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E5P6	3.5e-10	55.70	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T079	3.5e-10	55.70	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BEA4	1.8e-06	58.93	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UFG4	4.0e-06	57.14	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C012685 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..57

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012685.1	MELO3C012685.1	mRNA