MELO3C012580 (gene) Melon (DHL92) v4

Overview


Name	MELO3C012580
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Trihelix transcription factor ASIL2
Location	chr01: 19423270 .. 19423524 (+)
RNA-Seq Expression	MELO3C012580
Synteny	MELO3C012580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCCCTAATTCAAATTCGATTTTATGGGTGAACCCTACTACCGTTAATTTTGGGACTAGAGTTGTCAGGGAGTCGAATCCGGTGAGGTCGATGACAGGGAAGAGGAAGGAAAGGGAAAGGGAACGAGACCCATTTGCAAATATGGTGTTCGCCATTAAAACTTTGGGAGATAGGTTTGTGAGAATGGAGAGGATGAAGGTGGAAATGGCTAAAGAGATCGAAGCTATGAGAATGGAAATAGAGATTAAATGA

mRNA sequence

ATGACCCCTAATTCAAATTCGATTTTATGGGTGAACCCTACTACCGTTAATTTTGGGACTAGAGTTGTCAGGGAGTCGAATCCGGTGAGGTCGATGACAGGGAAGAGGAAGGAAAGGGAAAGGGAACGAGACCCATTTGCAAATATGGTGTTCGCCATTAAAACTTTGGGAGATAGGTTTGTGAGAATGGAGAGGATGAAGGTGGAAATGGCTAAAGAGATCGAAGCTATGAGAATGGAAATAGAGATTAAATGA

Coding sequence (CDS)

ATGACCCCTAATTCAAATTCGATTTTATGGGTGAACCCTACTACCGTTAATTTTGGGACTAGAGTTGTCAGGGAGTCGAATCCGGTGAGGTCGATGACAGGGAAGAGGAAGGAAAGGGAAAGGGAACGAGACCCATTTGCAAATATGGTGTTCGCCATTAAAACTTTGGGAGATAGGTTTGTGAGAATGGAGAGGATGAAGGTGGAAATGGCTAAAGAGATCGAAGCTATGAGAATGGAAATAGAGATTAAATGA

Protein sequence

MTPNSNSILWVNPTTVNFGTRVVRESNPVRSMTGKRKERERERDPFANMVFAIKTLGDRFVRMERMKVEMAKEIEAMRMEIEIK

Homology

[Close]

BLAST of MELO3C012580 vs. NCBI nr
Match: KAA0062824.1 (trihelix transcription factor ASIL2 [Cucumis melo var. makuwa] >TYJ96728.1 trihelix transcription factor ASIL2 [Cucumis melo var. makuwa])

HSP 1 Score: 156.8 bits (395), Expect = 8.4e-35
Identity = 80/84 (95.24%), Postives = 82/84 (97.62%), Query Frame = 0


Query: 1  MTPNSNSILWVNPTTVNFGTRVVRESNPVRSMTGKRKERERERDPFANMVFAIKTLGDRF 60
          MTPNSNSILWVNPTTVNFGTRVVRESNPVRSMTGKRKERERERDPFA MVFAIKTLGD+F
Sbjct: 1  MTPNSNSILWVNPTTVNFGTRVVRESNPVRSMTGKRKERERERDPFAKMVFAIKTLGDKF 60

Query: 61 VRMERMKVEMAKEIEAMRMEIEIK 85
          VRMERMKVEMAKEIE MRME+EIK
Sbjct: 61 VRMERMKVEMAKEIEVMRMEMEIK 84

[Close]

BLAST of MELO3C012580 vs. NCBI nr
Match: KAA0049128.1 (trihelix transcription factor ASIL2 [Cucumis melo var. makuwa])

HSP 1 Score: 125.9 bits (315), Expect = 1.6e-25
Identity = 66/84 (78.57%), Postives = 72/84 (85.71%), Query Frame = 0


Query: 1   MTPNSNSILWVNPTTVNFGTRVVRESNPVRSMTGKRKERERERDPFANMVFAIKTLGDRF 60
           M PNSN +  +NP  VNFGTRVVRESNPVR +TGKR ERERERDP A MV AIKTLGD F
Sbjct: 249 MNPNSNPVSGLNPAAVNFGTRVVRESNPVRPVTGKRGERERERDPVAEMVSAIKTLGDGF 308

Query: 61  VRMERMKVEMAKEIEAMRMEIEIK 85
           VRMERMK+EMA+EIEAMRME+EIK
Sbjct: 309 VRMERMKMEMAREIEAMRMEMEIK 332

[Close]

BLAST of MELO3C012580 vs. NCBI nr
Match: XP_008438313.1 (PREDICTED: trihelix transcription factor ASIL2 [Cucumis melo] >TYK17435.1 trihelix transcription factor ASIL2 [Cucumis melo var. makuwa])

HSP 1 Score: 125.9 bits (315), Expect = 1.6e-25
Identity = 66/84 (78.57%), Postives = 72/84 (85.71%), Query Frame = 0


Query: 1   MTPNSNSILWVNPTTVNFGTRVVRESNPVRSMTGKRKERERERDPFANMVFAIKTLGDRF 60
           M PNSN +  +NP  VNFGTRVVRESNPVR +TGKR ERERERDP A MV AIKTLGD F
Sbjct: 248 MNPNSNPVSGLNPAAVNFGTRVVRESNPVRPVTGKRGERERERDPVAEMVSAIKTLGDGF 307

Query: 61  VRMERMKVEMAKEIEAMRMEIEIK 85
           VRMERMK+EMA+EIEAMRME+EIK
Sbjct: 308 VRMERMKMEMAREIEAMRMEMEIK 331

[Close]

BLAST of MELO3C012580 vs. NCBI nr
Match: XP_004133978.1 (trihelix transcription factor ASIL2 [Cucumis sativus] >KGN56705.1 hypothetical protein Csa_011091 [Cucumis sativus])

HSP 1 Score: 125.9 bits (315), Expect = 1.6e-25
Identity = 66/84 (78.57%), Postives = 72/84 (85.71%), Query Frame = 0


Query: 1   MTPNSNSILWVNPTTVNFGTRVVRESNPVRSMTGKRKERERERDPFANMVFAIKTLGDRF 60
           M PNSN +  +NP  VNFGTRVVRESNPVR +TGKR ERERERDP A MV AIKTLGD F
Sbjct: 248 MNPNSNPVSGMNPAAVNFGTRVVRESNPVRPVTGKRGERERERDPVAEMVSAIKTLGDGF 307

Query: 61  VRMERMKVEMAKEIEAMRMEIEIK 85
           VRMERMK+EMA+EIEAMRME+EIK
Sbjct: 308 VRMERMKMEMAREIEAMRMEMEIK 331

[Close]

BLAST of MELO3C012580 vs. NCBI nr
Match: XP_038901483.1 (trihelix transcription factor ASIL2 [Benincasa hispida])

HSP 1 Score: 122.9 bits (307), Expect = 1.3e-24
Identity = 65/84 (77.38%), Postives = 71/84 (84.52%), Query Frame = 0


Query: 1   MTPNSNSILWVNPTTVNFGTRVVRESNPVRSMTGKRKERERERDPFANMVFAIKTLGDRF 60
           M PNSN +  +N   VNFGTRVVRESNPVR +TGKR ERERERDP A MV AIKTLGD F
Sbjct: 245 MNPNSNPVSGMNSAAVNFGTRVVRESNPVRPVTGKRGERERERDPVAEMVSAIKTLGDGF 304

Query: 61  VRMERMKVEMAKEIEAMRMEIEIK 85
           VRMERMK+EMA+EIEAMRME+EIK
Sbjct: 305 VRMERMKMEMAREIEAMRMEMEIK 328

[Close]

BLAST of MELO3C012580 vs. ExPASy TrEMBL
Match: A0A5A7V6E6 (Trihelix transcription factor ASIL2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00160 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.1e-35
Identity = 80/84 (95.24%), Postives = 82/84 (97.62%), Query Frame = 0


Query: 1  MTPNSNSILWVNPTTVNFGTRVVRESNPVRSMTGKRKERERERDPFANMVFAIKTLGDRF 60
          MTPNSNSILWVNPTTVNFGTRVVRESNPVRSMTGKRKERERERDPFA MVFAIKTLGD+F
Sbjct: 1  MTPNSNSILWVNPTTVNFGTRVVRESNPVRSMTGKRKERERERDPFAKMVFAIKTLGDKF 60

Query: 61 VRMERMKVEMAKEIEAMRMEIEIK 85
          VRMERMKVEMAKEIE MRME+EIK
Sbjct: 61 VRMERMKVEMAKEIEVMRMEMEIK 84

[Close]

BLAST of MELO3C012580 vs. ExPASy TrEMBL
Match: A0A5D3D133 (Trihelix transcription factor ASIL2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002990 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.7e-26
Identity = 66/84 (78.57%), Postives = 72/84 (85.71%), Query Frame = 0


Query: 1   MTPNSNSILWVNPTTVNFGTRVVRESNPVRSMTGKRKERERERDPFANMVFAIKTLGDRF 60
           M PNSN +  +NP  VNFGTRVVRESNPVR +TGKR ERERERDP A MV AIKTLGD F
Sbjct: 248 MNPNSNPVSGLNPAAVNFGTRVVRESNPVRPVTGKRGERERERDPVAEMVSAIKTLGDGF 307

Query: 61  VRMERMKVEMAKEIEAMRMEIEIK 85
           VRMERMK+EMA+EIEAMRME+EIK
Sbjct: 308 VRMERMKMEMAREIEAMRMEMEIK 331

[Close]

BLAST of MELO3C012580 vs. ExPASy TrEMBL
Match: A0A5A7U1M4 (Trihelix transcription factor ASIL2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G003590 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.7e-26
Identity = 66/84 (78.57%), Postives = 72/84 (85.71%), Query Frame = 0


Query: 1   MTPNSNSILWVNPTTVNFGTRVVRESNPVRSMTGKRKERERERDPFANMVFAIKTLGDRF 60
           M PNSN +  +NP  VNFGTRVVRESNPVR +TGKR ERERERDP A MV AIKTLGD F
Sbjct: 249 MNPNSNPVSGLNPAAVNFGTRVVRESNPVRPVTGKRGERERERDPVAEMVSAIKTLGDGF 308

Query: 61  VRMERMKVEMAKEIEAMRMEIEIK 85
           VRMERMK+EMA+EIEAMRME+EIK
Sbjct: 309 VRMERMKMEMAREIEAMRMEMEIK 332

[Close]

BLAST of MELO3C012580 vs. ExPASy TrEMBL
Match: A0A0A0L413 (MADF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G129620 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.7e-26
Identity = 66/84 (78.57%), Postives = 72/84 (85.71%), Query Frame = 0


Query: 1   MTPNSNSILWVNPTTVNFGTRVVRESNPVRSMTGKRKERERERDPFANMVFAIKTLGDRF 60
           M PNSN +  +NP  VNFGTRVVRESNPVR +TGKR ERERERDP A MV AIKTLGD F
Sbjct: 248 MNPNSNPVSGMNPAAVNFGTRVVRESNPVRPVTGKRGERERERDPVAEMVSAIKTLGDGF 307

Query: 61  VRMERMKVEMAKEIEAMRMEIEIK 85
           VRMERMK+EMA+EIEAMRME+EIK
Sbjct: 308 VRMERMKMEMAREIEAMRMEMEIK 331

[Close]

BLAST of MELO3C012580 vs. ExPASy TrEMBL
Match: A0A1S3AW32 (trihelix transcription factor ASIL2 OS=Cucumis melo OX=3656 GN=LOC103483457 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.7e-26
Identity = 66/84 (78.57%), Postives = 72/84 (85.71%), Query Frame = 0


Query: 1   MTPNSNSILWVNPTTVNFGTRVVRESNPVRSMTGKRKERERERDPFANMVFAIKTLGDRF 60
           M PNSN +  +NP  VNFGTRVVRESNPVR +TGKR ERERERDP A MV AIKTLGD F
Sbjct: 248 MNPNSNPVSGLNPAAVNFGTRVVRESNPVRPVTGKRGERERERDPVAEMVSAIKTLGDGF 307

Query: 61  VRMERMKVEMAKEIEAMRMEIEIK 85
           VRMERMK+EMA+EIEAMRME+EIK
Sbjct: 308 VRMERMKMEMAREIEAMRMEMEIK 331

[Close]

BLAST of MELO3C012580 vs. TAIR 10
Match: AT2G44730.1 (Alcohol dehydrogenase transcription factor Myb/SANT-like family protein )

HSP 1 Score: 51.6 bits (122), Expect = 3.6e-07
Identity = 31/70 (44.29%), Postives = 41/70 (58.57%), Query Frame = 0


Query: 17  NFGTRVVR--ESNPVRSMTGKRKERERERDPFANMVFAIKTLGDRFVRMERMKVEMAKEI 76
           ++G RVVR  E    R      K  E + DP   +  AIK LGD  VR E+ ++EM +EI
Sbjct: 267 SYGARVVRIPEGGGKRGREMMMKTEEDDNDPMVEIASAIKLLGDTLVRTEQTRMEMTREI 326

Query: 77  EAMRMEIEIK 85
           EAMRM+ E+K
Sbjct: 327 EAMRMDTEMK 336

[Close]

BLAST of MELO3C012580 vs. TAIR 10
Match: AT4G17060.1 (FRIGIDA interacting protein 2 )

HSP 1 Score: 41.2 bits (95), Expect = 4.8e-04
Identity = 21/45 (46.67%), Postives = 31/45 (68.89%), Query Frame = 0


Query: 40  ERERDPFANMVFAIKTLGDRFVRMERMKVEMAKEIEAMRMEIEIK 85
           E E DP   +V ++K L + FVR+E  K+EM +E+E  RME+E+K
Sbjct: 233 EVESDPIDEVVSSVKMLTEMFVRVENSKMEMMREMEKSRMEMELK 277

The following BLAST results are available for this feature:

BLAST of MELO3C012580 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062824.1	8.4e-35	95.24	trihelix transcription factor ASIL2 [Cucumis melo var. makuwa] >TYJ96728.1 trihe...	[more]
KAA0049128.1	1.6e-25	78.57	trihelix transcription factor ASIL2 [Cucumis melo var. makuwa]	[more]
XP_008438313.1	1.6e-25	78.57	PREDICTED: trihelix transcription factor ASIL2 [Cucumis melo] >TYK17435.1 trihel...	[more]
XP_004133978.1	1.6e-25	78.57	trihelix transcription factor ASIL2 [Cucumis sativus] >KGN56705.1 hypothetical p...	[more]
XP_038901483.1	1.3e-24	77.38	trihelix transcription factor ASIL2 [Benincasa hispida]	[more]

BLAST of MELO3C012580 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C012580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V6E6	4.1e-35	95.24	Trihelix transcription factor ASIL2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5D3D133	7.7e-26	78.57	Trihelix transcription factor ASIL2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5A7U1M4	7.7e-26	78.57	Trihelix transcription factor ASIL2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A0A0L413	7.7e-26	78.57	MADF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G129620 PE=4 S...	[more]
A0A1S3AW32	7.7e-26	78.57	trihelix transcription factor ASIL2 OS=Cucumis melo OX=3656 GN=LOC103483457 PE=4...	[more]

BLAST of MELO3C012580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44730.1	3.6e-07	44.29	Alcohol dehydrogenase transcription factor Myb/SANT-like family protein	[more]
AT4G17060.1	4.8e-04	46.67	FRIGIDA interacting protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044823	Trihelix transcription factor ASIL1/2-like	PANTHER	PTHR31307	TRIHELIX TRANSCRIPTION FACTOR ASIL2	coord: 29..84
None	No IPR available	PANTHER	PTHR31307:SF52	TRANSCRIPTION FACTOR	coord: 29..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012580.1	MELO3C012580.1	mRNA