MELO3C012549 (gene) Melon (DHL92) v4

Overview
NameMELO3C012549
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr01: 18658176 .. 18658451 (+)
RNA-Seq ExpressionMELO3C012549
SyntenyMELO3C012549
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGTCGTCGGCGCTGTGAGGTCATCAGCTGTGAAGTCATCGGCTGTGAGGTCGTCGGTTGTGAGGTCGTCGGTTGTGTGGTCGTCGGCTGTAAGGTCGTCAGCTATAAGGTCATCGACTGTGAGGTTGTCGGCTGTAACGATTGGAACGAAGAAAATAGATGAGATTGATGAATTATACCGCTCGACAAAGCTGGAGATTAGGACAGATAAGATCGATGATGCGTCGCGCGACGGAGTTGGAGAACAAATGAGATCGTTTGTCGTCGTCTGA

mRNA sequence

ATGAGGGTCGTCGGCGCTGTGAGGTCATCAGCTGTGAAGTCATCGGCTGTGAGGTCGTCGGTTGTGAGGTCGTCGGTTGTGTGGTCGTCGGCTGTAAGGTCGTCAGCTATAAGGTCATCGACTGTGAGGTTGTCGGCTGTAACGATTGGAACGAAGAAAATAGATGAGATTGATGAATTATACCGCTCGACAAAGCTGGAGATTAGGACAGATAAGATCGATGATGCGTCGCGCGACGGAGTTGGAGAACAAATGAGATCGTTTGTCGTCGTCTGA

Coding sequence (CDS)

ATGAGGGTCGTCGGCGCTGTGAGGTCATCAGCTGTGAAGTCATCGGCTGTGAGGTCGTCGGTTGTGAGGTCGTCGGTTGTGTGGTCGTCGGCTGTAAGGTCGTCAGCTATAAGGTCATCGACTGTGAGGTTGTCGGCTGTAACGATTGGAACGAAGAAAATAGATGAGATTGATGAATTATACCGCTCGACAAAGCTGGAGATTAGGACAGATAAGATCGATGATGCGTCGCGCGACGGAGTTGGAGAACAAATGAGATCGTTTGTCGTCGTCTGA

Protein sequence

MRVVGAVRSSAVKSSAVRSSVVRSSVVWSSAVRSSAIRSSTVRLSAVTIGTKKIDEIDELYRSTKLEIRTDKIDDASRDGVGEQMRSFVVV
Homology
[Close]
BLAST of MELO3C012549 vs. NCBI nr
Match: TYK22666.1 (putative dynein heavy chain [Cucumis melo var. makuwa])

HSP 1 Score: 138.7 bits (348), Expect = 2.6e-29
Identity = 84/96 (87.50%), Postives = 85/96 (88.54%), Query Frame = 0 

Query: 1  MRVVGAVRSSAVKSSAVRSSVVRSS-----VVWSSAVRSSAIRSSTVRLSAVTIGTKKID 60
          MRVVG VRSS VKSSAVRSSVVRSS     VVWSSAVRSSAIRSSTVR S VTIGTKKID
Sbjct: 2  MRVVGTVRSSVVKSSAVRSSVVRSSVVRSLVVWSSAVRSSAIRSSTVRSSTVTIGTKKID 61

Query: 61 EIDELYRSTKLEIRTDKIDDASRDGVGEQMRSFVVV 92
          EIDELYR TK+EIRTDKIDDAS DGVGEQMRSFVVV
Sbjct: 62 EIDELYRPTKMEIRTDKIDDASCDGVGEQMRSFVVV 97

[Close]
BLAST of MELO3C012549 vs. NCBI nr
Match: KAA0036557.1 (putative dynein heavy chain [Cucumis melo var. makuwa])

HSP 1 Score: 137.1 bits (344), Expect = 7.5e-29
Identity = 84/96 (87.50%), Postives = 84/96 (87.50%), Query Frame = 0 

Query: 1   MRVVGAVRSSAVKSSAVRSSVVRSS-----VVWSSAVRSSAIRSSTVRLSAVTIGTKKID 60
           MRVVG VRSSAVKSSAVRSSVVRSS     VVWS AVRSSAIRS TVR SAVTIGTKKID
Sbjct: 6   MRVVGTVRSSAVKSSAVRSSVVRSSVVRSMVVWSLAVRSSAIRSLTVRSSAVTIGTKKID 65

Query: 61  EIDELYRSTKLEIRTDKIDDASRDGVGEQMRSFVVV 92
           EIDELY  TKLEIRTDKIDDASRDGVGEQMRSF VV
Sbjct: 66  EIDELYHPTKLEIRTDKIDDASRDGVGEQMRSFFVV 101

[Close]
BLAST of MELO3C012549 vs. ExPASy TrEMBL
Match: A0A5D3DGD7 (Putative dynein heavy chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G001110 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.2e-29
Identity = 84/96 (87.50%), Postives = 85/96 (88.54%), Query Frame = 0 

Query: 1  MRVVGAVRSSAVKSSAVRSSVVRSS-----VVWSSAVRSSAIRSSTVRLSAVTIGTKKID 60
          MRVVG VRSS VKSSAVRSSVVRSS     VVWSSAVRSSAIRSSTVR S VTIGTKKID
Sbjct: 2  MRVVGTVRSSVVKSSAVRSSVVRSSVVRSLVVWSSAVRSSAIRSSTVRSSTVTIGTKKID 61

Query: 61 EIDELYRSTKLEIRTDKIDDASRDGVGEQMRSFVVV 92
          EIDELYR TK+EIRTDKIDDAS DGVGEQMRSFVVV
Sbjct: 62 EIDELYRPTKMEIRTDKIDDASCDGVGEQMRSFVVV 97

[Close]
BLAST of MELO3C012549 vs. ExPASy TrEMBL
Match: A0A5A7T4R1 (Putative dynein heavy chain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00610 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.6e-29
Identity = 84/96 (87.50%), Postives = 84/96 (87.50%), Query Frame = 0 

Query: 1   MRVVGAVRSSAVKSSAVRSSVVRSS-----VVWSSAVRSSAIRSSTVRLSAVTIGTKKID 60
           MRVVG VRSSAVKSSAVRSSVVRSS     VVWS AVRSSAIRS TVR SAVTIGTKKID
Sbjct: 6   MRVVGTVRSSAVKSSAVRSSVVRSSVVRSMVVWSLAVRSSAIRSLTVRSSAVTIGTKKID 65

Query: 61  EIDELYRSTKLEIRTDKIDDASRDGVGEQMRSFVVV 92
           EIDELY  TKLEIRTDKIDDASRDGVGEQMRSF VV
Sbjct: 66  EIDELYHPTKLEIRTDKIDDASRDGVGEQMRSFFVV 101

The following BLAST results are available for this feature:
BLAST of MELO3C012549 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK22666.12.6e-2987.50putative dynein heavy chain [Cucumis melo var. makuwa][more]
KAA0036557.17.5e-2987.50putative dynein heavy chain [Cucumis melo var. makuwa][more]
BLAST of MELO3C012549 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C012549 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DGD71.2e-2987.50Putative dynein heavy chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5A7T4R13.6e-2987.50Putative dynein heavy chain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
BLAST of MELO3C012549 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C012549.1MELO3C012549.1mRNA