MELO3C012523 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACCAACCATAATCACTTCAATATCAGTTTGATTAAAAAATCAAACCCGATCAACCGAATCTTCCATCGTTTTTATTAGAGTAAAAAGATGTTGATAGGTTTACAAAGGTTATTGCTTTAAAACCCCCTCTTAAAGAAAATAAAAAAGAGGAAAATCTTAAAAAGAAAAACCCAAAGAAACTTTCTTCACTATAAAAATCCAATTGCTAAACCCGCCTCCAGCGGTGTGTCAAAGAAATGGCTTCCGTTTCCCGATCGCTTCTTACGGCGGCGGCGGCTTCCAGGTCCATGGCCGGCCGTACCAGACCACTTGCTCATAAAACCCTAAATCCATTGCTTGTTTCTTCTTCCTCCAGAAGCTTTCCTTCCATTACCAGGTACTTTCACTTCAAAGTTTGTAGTTTCACTCAGTGCTTTACGTGCCGGAATTTCTTTGCGATCTTCTTAGTTAACTTTTACTATTTTTGGATCTTGATTAATCTTTATTTACTTCCGTTTTCGTTGCTCGTTCTTTGTTTCTCTTTAGGATTGTTTCGTCTTTGGCTAATGTGGAGTCTTTGATGCCACTCCACACCGCCGTCGCTTCGGCTCGGCTGAAGTCCAAAATTGCCGTCGACTCTCATTGCTGGAGCTGGCTTTCTGAAGGTTCGTTTATTCTCCATTTCCTTTTTTGCGTTGTTCTTTTAAATGTCTGTATTTTTATCTGCGATATGGAGAGGATTTTTTTATTGATGTGATTTGGGATTCTGCCTTGTTAAATACCTTCTTATCCTCTGTTTCATTCTCGAAACATTGCAAAATTTCTAGTTGGTGTTCTTCTAAAATTGATTCTGTTTTTCAAATTCATCTTTTAGCCTCTATTAGATGTACGCGAAGTAAAAGAAATTGAGAAATGAACTTCTTATATATGGAGACTTGCAATGTTTTCTTCATTATTTAGTCCGAATTCTTTCATTTCCATGTAAACATCATTCCTTTCACAAGTCTGTTCACCTACCCCTTCAAATATGGAGACACTTATACGAGCTTTAGCAATATTGTTGATGAATTTCAAAATTAGTACTGTTTTACCCACTCTTCCCCTACTAATGGTCCTATTTTTTGGGGGCTGAAAGATCCACTTCTTTAATTACCGTTTAAAAAATAACTGTTCTTGGAATTTTGATTGCCTTGAACTTGGCCTCCTATCCATTCTAAGTTCTGGTTGTTTGGAGAACAATTTTGTTTTTTATTTTTTGAAAAATCAGAGCTTACTAATTTCTTTATTTAGTTTCTTACTCACATGCAGAAAATCGTTTTGAAATGTTGGCCAAATTTCAAAAACCAAAAACATAATAATCACATCCGGTACAAACTATGTATAAAAAGTGGAAAATGGGATATAGCCACATCTGGTACAAACTATTGACTAACATTGCATCTTTAGTGTATGTACTCTTGATTTATGAATTACATTCAATAAATGGCACTCCGTATCTATCTATCTATCTTGCGTCTCTTGTACATTTTAAGACTTTGTTTCCTAACTTCATCGTTTTATCTTATCTTTTAGGATTTGCAACATCTTTGTGACATAGCATGGTTGGTGAAGGTGAATTGTAATTGATAATACGGCTGAATGACTGGTAGCTGAAACGACCTTCCATTGGACTTGTGAGGTTTTTCCATCTTTCCTACTTATCTTTGTAAGATACCTTTATCACAAGGAAGAATCATTTAGACAACTATTTTTTCGTTTTTATCGTTGTATAATGCAATGCGGCCACATTTTCTGGATATGCAGAGAGCTATTGTTTTAAGCCTTTGAACACAAAGCTTGCAGTTTAGATTTTTGTTAGGCATCCCTCTTGCTCTTGACTTGTTCAATAACATGCAATTGATTTCTTACATTCTCTAATTATGAGGTCTTGAGATGATTTCTAATGCTTTTAAAACGTTGTGCTGAATTGAAACTTCAGATTTTTTTTGTAACCGGTTGGATTATCGTTTTTCAGGCATTCGTTGTCGTTAAACTGGTTAGGTTATGGATACGTGTATGGCTAAGATTAGAATAGAATGATCTTAAGTAAGCTGTAGCTGTGCTAAACATGTGATGGATCTATTATTCAGTAGTTTTCTTTCTAGCATCATCAACCAATATATGTTTCAAACCATTTCTTGAATTTGGAATTAGATATTACATAAGTCTAAGTTGGAGGAAGAATTTGTCCCACATCCCCATTAGAAGCGGTGTACCAAGTTTTTTTGCTCATTTCTAATAGGCGTGAAACTGTATATTTATGATCATATGTTAGGTGACTATGGGTTTGTGTGATGAATAGTGAGGATGGAAGTCGTTGCAACTTCCAAGATGGAATATGGATAACAGGAAAGGAAGTGTTTCTGAGGTTTTGTTCATAATTGTTCTCTATCTGTGAGGTTCAATGGATTAGGAGATGAAGTTAAAAACAGGAAATTGCCTTAAGTGTTAAATATGGCAAAGTTTAAATGTGTTTTCAGAATTTATGACTATATTGCAAAGGGTGTCTATCAGTCTTATGGTTATGGCTATTGGCTACAACGCAGTGCAGAAAC AAACCAACCATAATCACTTCAATATCAGTTTGATTAAAAAATCAAACCCGATCAACCGAATCTTCCATCGTTTTTATTAGAGTAAAAAGATGTTGATAGGTTTACAAAGGTTATTGCTTTAAAACCCCCTCTTAAAGAAAATAAAAAAGAGGAAAATCTTAAAAAGAAAAACCCAAAGAAACTTTCTTCACTATAAAAATCCAATTGCTAAACCCGCCTCCAGCGGTGTGTCAAAGAAATGGCTTCCGTTTCCCGATCGCTTCTTACGGCGGCGGCGGCTTCCAGGTCCATGGCCGGCCGTACCAGACCACTTGCTCATAAAACCCTAAATCCATTGCTTGTTTCTTCTTCCTCCAGAAGCTTTCCTTCCATTACCAGGATTGTTTCGTCTTTGGCTAATGTGGAGTCTTTGATGCCACTCCACACCGCCGTCGCTTCGGCTCGGCTGAAGTCCAAAATTGCCGTCGACTCTCATTGCTGGAGCTGGCTTTCTGAAGCTTTTAGGATTTGCAACATCTTTGTGACATAGCATGGTTGGTGAAGGTGAATTGTAATTGATAATACGGCTGAATGACTGGTAGCTGAAACGACCTTCCATTGGACTTGTGAGGTTTTTCCATCTTTCCTACTTATCTTTGTAAGATACCTTTATCACAAGGAAGAATCATTTAGACAACTATTTTTTCGTTTTTATCGTTGTATAATGCAATGCGGCCACATTTTCTGGATATGCAGAGAGCTATTGTTTTAAGCCTTTGAACACAAAGCTTGCAGTTTAGATTTTTGTTAGGCATCCCTCTTGCTCTTGACTTGTTCAATAACATGCAATTGATTTCTTACATTCTCTAATTATGAGGTCTTGAGATGATTTCTAATGCTTTTAAAACGTTGTGCTGAATTGAAACTTCAGATTTTTTTTGTAACCGGTTGGATTATCGTTTTTCAGGCATTCGTTGTCGTTAAACTGGTTAGGTTATGGATACGTGTATGGCTAAGATTAGAATAGAATGATCTTAAGTAAGCTGTAGCTGTGCTAAACATGTGATGGATCTATTATTCAGTAGTTTTCTTTCTAGCATCATCAACCAATATATGTTTCAAACCATTTCTTGAATTTGGAATTAGATATTACATAAGTCTAAGTTGGAGGAAGAATTTGTCCCACATCCCCATTAGAAGCGGTGTACCAAGTTTTTTTGCTCATTTCTAATAGGCGTGAAACTGTATATTTATGATCATATGTTAGGTGACTATGGGTTTGTGTGATGAATAGTGAGGATGGAAGTCGTTGCAACTTCCAAGATGGAATATGGATAACAGGAAAGGAAGTGTTTCTGAGGTTTTGTTCATAATTGTTCTCTATCTGTGAGGTTCAATGGATTAGGAGATGAAGTTAAAAACAGGAAATTGCCTTAAGTGTTAAATATGGCAAAGTTTAAATGTGTTTTCAGAATTTATGACTATATTGCAAAGGGTGTCTATCAGTCTTATGGTTATGGCTATTGGCTACAACGCAGTGCAGAAAC ATGGCTTCCGTTTCCCGATCGCTTCTTACGGCGGCGGCGGCTTCCAGGTCCATGGCCGGCCGTACCAGACCACTTGCTCATAAAACCCTAAATCCATTGCTTGTTTCTTCTTCCTCCAGAAGCTTTCCTTCCATTACCAGGATTGTTTCGTCTTTGGCTAATGTGGAGTCTTTGATGCCACTCCACACCGCCGTCGCTTCGGCTCGGCTGAAGTCCAAAATTGCCGTCGACTCTCATTGCTGGAGCTGGCTTTCTGAAGCTTTTAGGATTTGCAACATCTTTGTGACATAG MASVSRSLLTAAAASRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEAFRICNIFVT Homology
BLAST of MELO3C012523 vs. NCBI nr
Match: XP_008447032.1 (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like [Cucumis melo] >KAA0036617.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa] >TYK03356.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]) HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35 Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 0
BLAST of MELO3C012523 vs. NCBI nr
Match: XP_011659076.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Cucumis sativus] >KGN44352.1 hypothetical protein Csa_015783 [Cucumis sativus]) HSP 1 Score: 137.5 bits (345), Expect = 6.0e-29 Identity = 80/89 (89.89%), Postives = 82/89 (92.13%), Query Frame = 0
BLAST of MELO3C012523 vs. NCBI nr
Match: XP_038887804.1 (protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial [Benincasa hispida]) HSP 1 Score: 136.3 bits (342), Expect = 1.3e-28 Identity = 77/88 (87.50%), Postives = 80/88 (90.91%), Query Frame = 0
BLAST of MELO3C012523 vs. NCBI nr
Match: XP_023553689.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6572036.1 hypothetical protein SDJN03_28764, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011705.1 hypothetical protein SDJN02_26611 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 125.6 bits (314), Expect = 2.4e-25 Identity = 72/90 (80.00%), Postives = 78/90 (86.67%), Query Frame = 0
BLAST of MELO3C012523 vs. NCBI nr
Match: XP_022952105.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like [Cucurbita moschata]) HSP 1 Score: 125.2 bits (313), Expect = 3.1e-25 Identity = 71/90 (78.89%), Postives = 78/90 (86.67%), Query Frame = 0
BLAST of MELO3C012523 vs. ExPASy TrEMBL
Match: A0A5D3BYV0 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2392G00150 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 5.5e-36 Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 0
BLAST of MELO3C012523 vs. ExPASy TrEMBL
Match: A0A1S3BGG1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103489582 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 5.5e-36 Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 0
BLAST of MELO3C012523 vs. ExPASy TrEMBL
Match: A0A0A0K7P3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G268490 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 2.9e-29 Identity = 80/89 (89.89%), Postives = 82/89 (92.13%), Query Frame = 0
BLAST of MELO3C012523 vs. ExPASy TrEMBL
Match: A0A6J1GKU0 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111454867 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.5e-25 Identity = 71/90 (78.89%), Postives = 78/90 (86.67%), Query Frame = 0
BLAST of MELO3C012523 vs. ExPASy TrEMBL
Match: A0A6J1I675 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111471072 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 9.7e-25 Identity = 70/89 (78.65%), Postives = 76/89 (85.39%), Query Frame = 0
BLAST of MELO3C012523 vs. TAIR 10
Match: AT4G39300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 69.3 bits (168), Expect = 1.9e-12 Identity = 45/92 (48.91%), Postives = 62/92 (67.39%), Query Frame = 0
BLAST of MELO3C012523 vs. TAIR 10
Match: AT4G39300.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11630.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 69.3 bits (168), Expect = 1.9e-12 Identity = 45/92 (48.91%), Postives = 62/92 (67.39%), Query Frame = 0
BLAST of MELO3C012523 vs. TAIR 10
Match: AT2G20585.1 (nuclear fusion defective 6 ) HSP 1 Score: 40.4 bits (93), Expect = 9.4e-04 Identity = 31/93 (33.33%), Postives = 51/93 (54.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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