MELO3C012508 (gene) Melon (DHL92) v4

Overview


Name	MELO3C012508
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	protein RADIALIS-like 1
Location	chr01: 17701570 .. 17701815 (-)
RNA-Seq Expression	MELO3C012508
Synteny	MELO3C012508

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAATGTCTGCTCATGGGTCAACTCAATGGACTGCAATTGAAAACAAAGCCTTTGAGAAAGCTTTGGCAATTTATGACAAAGACACACCTGAGAGATGGCTCAATGTTGCAAAGGCCATTGGTGGAAAAACTGAAGAGGATGTCAAGAGGCATTATCAACTTCTTCTTGAGGATGTTAACCATATTGAGAATGGTCAAATTCCTTTTCCCTATCGAAACTCTACGAGGTCGAGTCGCTGA

mRNA sequence

ATGGCTTCAATGTCTGCTCATGGGTCAACTCAATGGACTGCAATTGAAAACAAAGCCTTTGAGAAAGCTTTGGCAATTTATGACAAAGACACACCTGAGAGATGGCTCAATGTTGCAAAGGCCATTGGTGGAAAAACTGAAGAGGATGTCAAGAGGCATTATCAACTTCTTCTTGAGGATGTTAACCATATTGAGAATGGTCAAATTCCTTTTCCCTATCGAAACTCTACGAGGTCGAGTCGCTGA

Coding sequence (CDS)

ATGGCTTCAATGTCTGCTCATGGGTCAACTCAATGGACTGCAATTGAAAACAAAGCCTTTGAGAAAGCTTTGGCAATTTATGACAAAGACACACCTGAGAGATGGCTCAATGTTGCAAAGGCCATTGGTGGAAAAACTGAAGAGGATGTCAAGAGGCATTATCAACTTCTTCTTGAGGATGTTAACCATATTGAGAATGGTCAAATTCCTTTTCCCTATCGAAACTCTACGAGGTCGAGTCGCTGA

Protein sequence

MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLEDVNHIENGQIPFPYRNSTRSSR

Homology

[Close]

BLAST of MELO3C012508 vs. NCBI nr
Match: XP_008447026.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis melo])

HSP 1 Score: 168.7 bits (426), Expect = 2.1e-38
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED
Sbjct: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60

Query: 61 VNHIENGQIPFPYRNSTRSSR 82
          VNHIENGQIPFPYRNSTRSSR
Sbjct: 61 VNHIENGQIPFPYRNSTRSSR 81

[Close]

BLAST of MELO3C012508 vs. NCBI nr
Match: KAE8645640.1 (hypothetical protein Csa_020521 [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 1.0e-29
Identity = 67/81 (82.72%), Postives = 74/81 (91.36%), Query Frame = 0


Query: 1  MASMSAHG-STQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLE 60
          MASM+AHG ST WT  +NKAFEKALA+YDKDTPERWLNVAKAIGGKTEE+VK HYQLL+E
Sbjct: 1  MASMTAHGPSTTWTINQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKSHYQLLVE 60

Query: 61 DVNHIENGQIPFPYRNSTRSS 81
          DV HIE+G+IPFPYR STRSS
Sbjct: 61 DVKHIESGEIPFPYRRSTRSS 81

[Close]

BLAST of MELO3C012508 vs. NCBI nr
Match: XP_008447025.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis melo])

HSP 1 Score: 138.3 bits (347), Expect = 3.0e-29
Identity = 64/76 (84.21%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MASMSAHGS  WTA +NKAFEKALA+YDKDTP+RWLNVAKAIGGKTEE+VKRHYQLLLED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VNHIENGQIPFPYRNS 77
          V HIE+G++PFPYR S
Sbjct: 61 VKHIESGKVPFPYRTS 76

[Close]

BLAST of MELO3C012508 vs. NCBI nr
Match: KAA0036165.1 (protein RADIALIS-like 1 [Cucumis melo var. makuwa] >TYK19711.1 protein RADIALIS-like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 136.7 bits (343), Expect = 8.7e-29
Identity = 65/78 (83.33%), Postives = 72/78 (92.31%), Query Frame = 0


Query: 1  MASMSAHG-STQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLE 60
          MASM+AHG ST WTA +NKAFEKALA+YDKDTPERWLNVAKAIGGKTEE+VKRHYQLL+E
Sbjct: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60

Query: 61 DVNHIENGQIPFPYRNST 78
          DV HIE+G+IPFPYR  T
Sbjct: 61 DVKHIESGEIPFPYRRLT 78

[Close]

BLAST of MELO3C012508 vs. NCBI nr
Match: KAA0036170.1 (protein RADIALIS-like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 136.7 bits (343), Expect = 8.7e-29
Identity = 63/76 (82.89%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MASMSAHGS  WTA +NKAFE+ALA+YDKDTP+RWLNVAKAIGGKTEE+VKRHYQLLLED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VNHIENGQIPFPYRNS 77
          V HIE+G++PFPYR S
Sbjct: 61 VKHIESGKVPFPYRTS 76

[Close]

BLAST of MELO3C012508 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.1e-23
Identity = 50/76 (65.79%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 2  ASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLEDV 61
          +SMS+  S  WTA +NKAFE+ALA YD+DTP RW NVAK +GGKT E+VKRHY+LL++D+
Sbjct: 4  SSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 62 NHIENGQIPFP-YRNS 77
          N IENG +PFP YR S
Sbjct: 64 NSIENGHVPFPNYRTS 79

[Close]

BLAST of MELO3C012508 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.7e-22
Identity = 47/79 (59.49%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 3  SMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLEDVN 62
          SMS++GS  WT  +NKAFE+ALA+YD+DTP+RW NVA+A+GGKT E+ KR Y LL+ D+ 
Sbjct: 5  SMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIE 64

Query: 63 HIENGQIPFP-YRNSTRSS 81
           IENG +PFP Y+ +T +S
Sbjct: 65 SIENGHVPFPDYKTTTGNS 83

[Close]

BLAST of MELO3C012508 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 9.1e-21
Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MAS S    + WT  +NK FE+ALA+YDKDTP+RW NVAKA+GGKT E+VKRHY +L+ED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VNHIENGQIPFP-YRNSTRSSR 82
          + +IE G++P P Y+    +SR
Sbjct: 61 LINIETGRVPLPNYKTFESNSR 82

[Close]

BLAST of MELO3C012508 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 9.1e-21
Identity = 44/77 (57.14%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MAS    G   W+A ENKAFE+ALA+YDKDTP+RW NVA+A+ G+T E+VK+HY++L+ED
Sbjct: 1  MASTRGSG-RPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVED 60

Query: 61 VNHIENGQIPFPYRNST 78
          + +IE+G++PFP   +T
Sbjct: 61 IKYIESGKVPFPNYRTT 76

[Close]

BLAST of MELO3C012508 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.0e-20
Identity = 46/77 (59.74%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MAS S   S  WT  ENK FE+ALA YD+DTP+RW NVA+A+GGK+ E+V+RHY+LL+ D
Sbjct: 1  MASNSMSSSASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRD 60

Query: 61 VNHIENGQIPFP-YRNS 77
          VN IE+G+ P P YR++
Sbjct: 61 VNDIESGRYPHPNYRSN 77

[Close]

BLAST of MELO3C012508 vs. ExPASy TrEMBL
Match: A0A1S3BGF0 (protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489577 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.0e-38
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED
Sbjct: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60

Query: 61 VNHIENGQIPFPYRNSTRSSR 82
          VNHIENGQIPFPYRNSTRSSR
Sbjct: 61 VNHIENGQIPFPYRNSTRSSR 81

[Close]

BLAST of MELO3C012508 vs. ExPASy TrEMBL
Match: A0A0A0K3K0 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G168060 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 7.9e-36
Identity = 76/81 (93.83%), Postives = 79/81 (97.53%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MASMSAHGS+ WTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEE+VKRHYQLLLED
Sbjct: 1  MASMSAHGSSAWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VNHIENGQIPFPYRNSTRSSR 82
          VNHIE+GQIPFPYR STRSSR
Sbjct: 61 VNHIESGQIPFPYRKSTRSSR 81

[Close]

BLAST of MELO3C012508 vs. ExPASy TrEMBL
Match: A0A1S3BGF6 (protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.4e-29
Identity = 64/76 (84.21%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MASMSAHGS  WTA +NKAFEKALA+YDKDTP+RWLNVAKAIGGKTEE+VKRHYQLLLED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VNHIENGQIPFPYRNS 77
          V HIE+G++PFPYR S
Sbjct: 61 VKHIESGKVPFPYRTS 76

[Close]

BLAST of MELO3C012508 vs. ExPASy TrEMBL
Match: A0A5A7T3V4 (Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold214G00070 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.2e-29
Identity = 65/78 (83.33%), Postives = 72/78 (92.31%), Query Frame = 0


Query: 1  MASMSAHG-STQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLE 60
          MASM+AHG ST WTA +NKAFEKALA+YDKDTPERWLNVAKAIGGKTEE+VKRHYQLL+E
Sbjct: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60

Query: 61 DVNHIENGQIPFPYRNST 78
          DV HIE+G+IPFPYR  T
Sbjct: 61 DVKHIESGEIPFPYRRLT 78

[Close]

BLAST of MELO3C012508 vs. ExPASy TrEMBL
Match: A0A5A7SYM4 (Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold69G00290 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.2e-29
Identity = 63/76 (82.89%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MASMSAHGS  WTA +NKAFE+ALA+YDKDTP+RWLNVAKAIGGKTEE+VKRHYQLLLED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VNHIENGQIPFPYRNS 77
          V HIE+G++PFPYR S
Sbjct: 61 VKHIESGKVPFPYRTS 76

[Close]

BLAST of MELO3C012508 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 110.2 bits (274), Expect = 8.1e-25
Identity = 50/76 (65.79%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 2  ASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLEDV 61
          +SMS+  S  WTA +NKAFE+ALA YD+DTP RW NVAK +GGKT E+VKRHY+LL++D+
Sbjct: 4  SSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 62 NHIENGQIPFP-YRNS 77
          N IENG +PFP YR S
Sbjct: 64 NSIENGHVPFPNYRTS 79

[Close]

BLAST of MELO3C012508 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 106.3 bits (264), Expect = 1.2e-23
Identity = 47/79 (59.49%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 3  SMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLEDVN 62
          SMS++GS  WT  +NKAFE+ALA+YD+DTP+RW NVA+A+GGKT E+ KR Y LL+ D+ 
Sbjct: 5  SMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIE 64

Query: 63 HIENGQIPFP-YRNSTRSS 81
           IENG +PFP Y+ +T +S
Sbjct: 65 SIENGHVPFPDYKTTTGNS 83

[Close]

BLAST of MELO3C012508 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 100.5 bits (249), Expect = 6.4e-22
Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MAS S    + WT  +NK FE+ALA+YDKDTP+RW NVAKA+GGKT E+VKRHY +L+ED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VNHIENGQIPFP-YRNSTRSSR 82
          + +IE G++P P Y+    +SR
Sbjct: 61 LINIETGRVPLPNYKTFESNSR 82

[Close]

BLAST of MELO3C012508 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 100.5 bits (249), Expect = 6.4e-22
Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MAS S    + WT  +NK FE+ALA+YDKDTP+RW NVAKA+GGKT E+VKRHY +L+ED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VNHIENGQIPFP-YRNSTRSSR 82
          + +IE G++P P Y+    +SR
Sbjct: 61 LINIETGRVPLPNYKTFESNSR 82

[Close]

BLAST of MELO3C012508 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 96.7 bits (239), Expect = 9.3e-21
Identity = 42/72 (58.33%), Postives = 56/72 (77.78%), Query Frame = 0


Query: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60
          MAS S   S+ WT+ +NK FE+ALA+YDKDTP+RW NVAKA+G K+ E+VKRHY +L+ED
Sbjct: 1  MASSSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVED 60

Query: 61 VNHIENGQIPFP 73
          + +IE   +P P
Sbjct: 61 LMNIEQDLVPLP 72

The following BLAST results are available for this feature:

BLAST of MELO3C012508 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447026.1	2.1e-38	100.00	PREDICTED: protein RADIALIS-like 1 [Cucumis melo]	[more]
KAE8645640.1	1.0e-29	82.72	hypothetical protein Csa_020521 [Cucumis sativus]	[more]
XP_008447025.1	3.0e-29	84.21	PREDICTED: protein RADIALIS-like 1 [Cucumis melo]	[more]
KAA0036165.1	8.7e-29	83.33	protein RADIALIS-like 1 [Cucumis melo var. makuwa] >TYK19711.1 protein RADIALIS-...	[more]
KAA0036170.1	8.7e-29	82.89	protein RADIALIS-like 1 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C012508 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVB8	1.1e-23	65.79	Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1	[more]
Q9SIJ5	1.7e-22	59.49	Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1	[more]
Q1A173	9.1e-21	57.32	Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1	[more]
Q58FS3	9.1e-21	57.14	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]
Q6NNN0	2.0e-20	59.74	Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1	[more]

BLAST of MELO3C012508 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BGF0	1.0e-38	100.00	protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489577 PE=4 SV=1	[more]
A0A0A0K3K0	7.9e-36	93.83	SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G168060 PE=4 S...	[more]
A0A1S3BGF6	1.4e-29	84.21	protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1	[more]
A0A5A7T3V4	4.2e-29	83.33	Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SYM4	4.2e-29	82.89	Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C012508 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39250.1	8.1e-25	65.79	RAD-like 1	[more]
AT2G21650.1	1.2e-23	59.49	Homeodomain-like superfamily protein	[more]
AT1G75250.1	6.4e-22	57.32	RAD-like 6	[more]
AT1G75250.2	6.4e-22	57.32	RAD-like 6	[more]
AT1G19510.1	9.3e-21	58.33	RAD-like 5	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 8..60 e-value: 1.2E-8 score: 44.7
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 12..58 score: 6.190816
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 12..58 e-value: 2.58383E-8 score: 43.333
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 11..58 e-value: 1.2E-6 score: 28.7
None	No IPR available	GENE3D	1.10.10.60		coord: 3..71 e-value: 1.5E-22 score: 81.2
None	No IPR available	PANTHER	PTHR43952:SF53	TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED	coord: 1..78
IPR044636	Transcription factor RADIALIS-like	PANTHER	PTHR43952	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 1..78
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 7..62 score: 10.852118
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 10..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012508.1	MELO3C012508.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003700	DNA-binding transcription factor activity