MELO3C012410 (gene) Melon (DHL92) v4

Overview


Name	MELO3C012410
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	thioredoxin-like 3-2, chloroplastic
Location	chr10: 645063 .. 647363 (-)
RNA-Seq Expression	MELO3C012410
Synteny	MELO3C012410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGACTTCCCGGATGCTTCCTTTTATATTTATTTTGTTTATTTCATAATTGGATTTCTCAACTCCAAAAGAAAAACAAAAAGAAAAAAGAAAAAAAAATTGTATTTTGTTTCTCAATTCTCTTTATTTTTATTCTTTTATTGTTTGTTTTCTTCAACGAAACCAAATGGCGTTTCGTTAAGGTTTCACAGTTTGTGAAATCCATCGGAAACAATATCTGAATTGACTCTGATTCTCCCGGTGGGACTTCACCGGAACCATCTCTAGCGCCGCCGCCGTCGCCACTCCCATCAAACCCACCAGCCTCTTCCTCTTTGAACTTTTCTTTTTGTTACCCAATTCTTCTCCCCTTCCGAAATGGTCAAAGCTCTGCCCCTTCACCTCGGAATTGTGAAATCTTTTCCCAAATTCGACAGTTCTTTTGATCTTCCTCCGTCTCCTCAACTTCTGTCCGCGAGGCTCCCTGGTTCTGGTTTCAACAGGCTTCCTTTGTCTCGGAAATTTCCGCCGATTTTCCAGAAAGTTTCTGCGACTGGTGAGAAGACTTCGCTGCTCGGAGCTTGGACCCAAGATAGTGCCTTGCAATTTCGAGATGAATCGCCTGTTTCGATTGAGCTCAAGTCAATTTCCAGTGAGCTTGAGTTCGATAAGGCTATTGCAGATGCGGAGGAACGCAACGAGCTCGTGATTCTTGTTTGGTATGCTTAAGTTTCTTGTGGAATTTTTCTGGGAAATGTTGAGTCAATTACGGAACTTTCTAACAAAGCGTTTTTTGGCTTAAGTTTTAGAGAGACGATGTGAATGTATTTGAGTTTGACTGGATCTTGTTTGATTAGAAGTTTATTTGTTTATTAGGAAAAATTGTTCTCAACTGCTAGATTGATTAACCTGGGGTTTAGCTGAAATTGATTAACCTTCGTTGTACATCGATTGTGATCATTTGGAAGTGAATGGTGTGATATTTTTCTTCAATTTTCTTTACAGGCCTTTCAAGTGCATTTCTCATGATTTTATCTTCTTTAGTTGAAAAGTGAATTTATGTGGATCTGTAGGATGGCTAACTGGTGCAGAAATTATATTTATTTAAAGCCTCAACTGGAAAGATTGGCTGCTGATTATTACCCCAGGTTAGCTCCTAACCCATTTCTTCTAATCAACCAAATGGCTAAAATCGAACTATATTTCCATTCTCCATGTGGTGGATAATCCTTAAAAGATCAGTGTGTCAGACCTCATTGAAGTTTAGTATGTGCTTGATGAATTGTAGATTGCAATTCTACTGCATTGATGTCAATATGGTGCCACACAAGCTAGTTGTTCGAGCCGGATTAGCTGTAAGTTCCTTTCGAAGCCTTTTGATGTTTGTTCCATTTTCTTTGTGTTGCCGTAATCCTTTATATTGATCTTCTTTAGGTAGGACTTGAGGTTATGACAACTTCTACTTCTCTGAGAGAGTGGTTTTCTTTGGATACTGTACTAGAGCTTCTGTTTACAATGGAAATTAGGGCTTGTGTTTCATTACCTTCAGGAACATTCCCAACTTGCAGTTTGGACATAGGAGACAGTAGACATGTTGAGTTTATGTTACTTTGATGGATTAGTTTATTGAATAAACTACATTATCTGTTGAGTGTTTAATTTGAATATGTCCAAACGTAAAATATTTCCGTTCCTTGGTTGAGTGATACAAATTCTGATAGTTTTGATTTTGTACATTTTCTCATGTATCGCAATCGTTCGTCCTTGAATCATCCAGAAGATGCCAGCTATACAGGTGAGTTCCCTCACAATCAGATGTCCTACAGCTGGAAACCTCTCTCTACTAACGTCAAGATCTTAACTGTGTTTATTGCAGCTATGGAAGGATGGTAAGAAACAAGATGAGGTGGTTGGTCTCTATAAAGCATATCTAGTCGTCAACGATGTTCGGAAAATGATTGAACGTGAGCTAACAGATGAGTGACCTACGATTCATTTTTACCCACATCCTCTTATCCACTTAGTGGTATTGAAATTGATTGATAGCATCTCACAGAAATTCCATTCTGCTTATATTGATCAACATAAAGAACAAGGCCTGGCTGGCCTTCTTGCCAAGTCTTTGTCCTTGCAGAGATCATTTCTTTGTTGTCATGGGGTGGATGATCTAACATGTATGTCCAATTCTTGACAATATACACATTGTGAGGAAGTCTTATTTGTAAGGTTTACCATCTGTTTTATACCATTCCTTTCCCTTATATCTGATATGCAGAGGGCCCTGTTTTGTGTTGGTGGATTAATTTAATTGTTCTGATCTATTA

mRNA sequence

CGACTTCCCGGATGCTTCCTTTTATATTTATTTTGTTTATTTCATAATTGGATTTCTCAACTCCAAAAGAAAAACAAAAAGAAAAAAGAAAAAAAAATTGTATTTTGTTTCTCAATTCTCTTTATTTTTATTCTTTTATTGTTTGTTTTCTTCAACGAAACCAAATGGCGTTTCGTTAAGGTTTCACAGTTTGTGAAATCCATCGGAAACAATATCTGAATTGACTCTGATTCTCCCGGTGGGACTTCACCGGAACCATCTCTAGCGCCGCCGCCGTCGCCACTCCCATCAAACCCACCAGCCTCTTCCTCTTTGAACTTTTCTTTTTGTTACCCAATTCTTCTCCCCTTCCGAAATGGTCAAAGCTCTGCCCCTTCACCTCGGAATTGTGAAATCTTTTCCCAAATTCGACAGTTCTTTTGATCTTCCTCCGTCTCCTCAACTTCTGTCCGCGAGGCTCCCTGGTTCTGGTTTCAACAGGCTTCCTTTGTCTCGGAAATTTCCGCCGATTTTCCAGAAAGTTTCTGCGACTGGTGAGAAGACTTCGCTGCTCGGAGCTTGGACCCAAGATAGTGCCTTGCAATTTCGAGATGAATCGCCTGTTTCGATTGAGCTCAAGTCAATTTCCAGTGAGCTTGAGTTCGATAAGGCTATTGCAGATGCGGAGGAACGCAACGAGCTCGTGATTCTTGTTTGGATGGCTAACTGGTGCAGAAATTATATTTATTTAAAGCCTCAACTGGAAAGATTGGCTGCTGATTATTACCCCAGATTGCAATTCTACTGCATTGATGTCAATATGGTGCCACACAAGCTAGTTGTTCGAGCCGGATTAGCTAAGATGCCAGCTATACAGCTATGGAAGGATGGTAAGAAACAAGATGAGGTGGTTGGTCTCTATAAAGCATATCTAGTCGTCAACGATGTTCGGAAAATGATTGAACGTGAGCTAACAGATGAGTGACCTACGATTCATTTTTACCCACATCCTCTTATCCACTTAGTGGTATTGAAATTGATTGATAGCATCTCACAGAAATTCCATTCTGCTTATATTGATCAACATAAAGAACAAGGCCTGGCTGGCCTTCTTGCCAAGTCTTTGTCCTTGCAGAGATCATTTCTTTGTTGTCATGGGGTGGATGATCTAACATGTATGTCCAATTCTTGACAATATACACATTGTGAGGAAGTCTTATTTGTAAGGTTTACCATCTGTTTTATACCATTCCTTTCCCTTATATCTGATATGCAGAGGGCCCTGTTTTGTGTTGGTGGATTAATTTAATTGTTCTGATCTATTA

Coding sequence (CDS)

ATGGTCAAAGCTCTGCCCCTTCACCTCGGAATTGTGAAATCTTTTCCCAAATTCGACAGTTCTTTTGATCTTCCTCCGTCTCCTCAACTTCTGTCCGCGAGGCTCCCTGGTTCTGGTTTCAACAGGCTTCCTTTGTCTCGGAAATTTCCGCCGATTTTCCAGAAAGTTTCTGCGACTGGTGAGAAGACTTCGCTGCTCGGAGCTTGGACCCAAGATAGTGCCTTGCAATTTCGAGATGAATCGCCTGTTTCGATTGAGCTCAAGTCAATTTCCAGTGAGCTTGAGTTCGATAAGGCTATTGCAGATGCGGAGGAACGCAACGAGCTCGTGATTCTTGTTTGGATGGCTAACTGGTGCAGAAATTATATTTATTTAAAGCCTCAACTGGAAAGATTGGCTGCTGATTATTACCCCAGATTGCAATTCTACTGCATTGATGTCAATATGGTGCCACACAAGCTAGTTGTTCGAGCCGGATTAGCTAAGATGCCAGCTATACAGCTATGGAAGGATGGTAAGAAACAAGATGAGGTGGTTGGTCTCTATAAAGCATATCTAGTCGTCAACGATGTTCGGAAAATGATTGAACGTGAGCTAACAGATGAGTGA

Protein sequence

MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATGEKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVGLYKAYLVVNDVRKMIERELTDE

Homology

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BLAST of MELO3C012410 vs. NCBI nr
Match: XP_008446852.1 (PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X8 [Cucumis melo] >TYK09259.1 thioredoxin-like 3-2 [Cucumis melo var. makuwa])

HSP 1 Score: 407.9 bits (1047), Expect = 5.0e-110
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60
           MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120
           EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180
           NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180

Query: 181 LYKAYLVVNDVRKMIERELTDE 203
           LYKAYLVVNDVRKMIERELTDE
Sbjct: 181 LYKAYLVVNDVRKMIERELTDE 202

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BLAST of MELO3C012410 vs. NCBI nr
Match: XP_008446851.1 (PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X7 [Cucumis melo])

HSP 1 Score: 402.1 bits (1032), Expect = 2.8e-108
Identity = 202/206 (98.06%), Postives = 202/206 (98.06%), Query Frame = 0


Query: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60
           MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120
           EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA----KMPAIQLWKDGKKQD 180
           NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA    KMPAIQLWKDGKKQD
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAVGLEKMPAIQLWKDGKKQD 180

Query: 181 EVVGLYKAYLVVNDVRKMIERELTDE 203
           EVVGLYKAYLVVNDVRKMIERELTDE
Sbjct: 181 EVVGLYKAYLVVNDVRKMIERELTDE 206

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BLAST of MELO3C012410 vs. NCBI nr
Match: XP_008446853.1 (PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X9 [Cucumis melo])

HSP 1 Score: 401.4 bits (1030), Expect = 4.7e-108
Identity = 201/202 (99.50%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60
           MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120
           EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180
           NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA MPAIQLWKDGKKQDEVVG
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA-MPAIQLWKDGKKQDEVVG 180

Query: 181 LYKAYLVVNDVRKMIERELTDE 203
           LYKAYLVVNDVRKMIERELTDE
Sbjct: 181 LYKAYLVVNDVRKMIERELTDE 201

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BLAST of MELO3C012410 vs. NCBI nr
Match: XP_008446849.1 (PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X5 [Cucumis melo])

HSP 1 Score: 401.0 bits (1029), Expect = 6.2e-108
Identity = 202/209 (96.65%), Postives = 202/209 (96.65%), Query Frame = 0


Query: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60
           MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120
           EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYP-------RLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGK 180
           NYIYLKPQLERLAADYYP       RLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGK
Sbjct: 121 NYIYLKPQLERLAADYYPSMCLMNCRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGK 180

Query: 181 KQDEVVGLYKAYLVVNDVRKMIERELTDE 203
           KQDEVVGLYKAYLVVNDVRKMIERELTDE
Sbjct: 181 KQDEVVGLYKAYLVVNDVRKMIERELTDE 209

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BLAST of MELO3C012410 vs. NCBI nr
Match: XP_004142496.2 (thioredoxin-like 3-2, chloroplastic isoform X1 [Cucumis sativus] >KGN52252.1 hypothetical protein Csa_008733 [Cucumis sativus])

HSP 1 Score: 395.6 bits (1015), Expect = 2.6e-106
Identity = 196/202 (97.03%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60
           MVKALPLH GIVKSFPKF SSFDLPPSPQLLSARL GSGFNRLPLSRKFPP+FQKVSATG
Sbjct: 1   MVKALPLHHGIVKSFPKFGSSFDLPPSPQLLSARLAGSGFNRLPLSRKFPPLFQKVSATG 60

Query: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120
           EKTSL GAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR
Sbjct: 61  EKTSLFGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180
           NYIYLKPQLERLAADYYPRLQFYCIDVN+VPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNVVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180

Query: 181 LYKAYLVVNDVRKMIERELTDE 203
           LYKAYLVVNDVRKMIERELTDE
Sbjct: 181 LYKAYLVVNDVRKMIERELTDE 202

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BLAST of MELO3C012410 vs. ExPASy Swiss-Prot
Match: Q8VZT6 (Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC2 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.6e-42
Identity = 86/172 (50.00%), Postives = 118/172 (68.60%), Query Frame = 0


Query: 27  SPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATGEKTSLLGAWTQDSALQFRDESPVSIE 86
           SP +   R   S F+R P + K+     K+    E+   +    QD  LQ  D+SPVS+E
Sbjct: 19  SPLVPPYRQTSSSFSR-PRNFKYHSFTDKICLAAERIRAVDIQKQDGGLQELDDSPVSVE 78

Query: 87  LKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCID 146
           L  I  E  FD+ + DA++  E V++VWMA WCR  IYLKP+LE+LAA++YPRL+FY +D
Sbjct: 79  LGPICGESHFDQVMEDAQKLGESVVIVWMAAWCRKCIYLKPKLEKLAAEFYPRLRFYHVD 138

Query: 147 VNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVGLYKAYLVVNDVRKMIERE 199
           VN VP++LV RAG+ KMP IQLW+DG+KQ EV+G +KA+ VVN+VR+MIE +
Sbjct: 139 VNAVPYRLVSRAGVTKMPTIQLWRDGQKQAEVIGGHKAHFVVNEVREMIEND 189

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BLAST of MELO3C012410 vs. ExPASy Swiss-Prot
Match: Q9FG36 (Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE=2 SV=3)

HSP 1 Score: 121.7 bits (304), Expect = 9.5e-27
Identity = 52/116 (44.83%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 82  PVSIELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQ 141
           P ++E++ I++  E D  ++ A + ++ +I+ WMA+WCR  IYLKP+LE+LAA+Y  R +
Sbjct: 93  PTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAK 152

Query: 142 FYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVGLYKAYLVVNDVRKMIER 198
           FY +DVN VP  LV R  ++KMP IQLWK+ + ++EV+G +K +LV+ +VR++I +
Sbjct: 153 FYYVDVNKVPQTLVKRGNISKMPTIQLWKEDEMKEEVIGGHKGWLVIEEVRELINK 208

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BLAST of MELO3C012410 vs. ExPASy Swiss-Prot
Match: Q6Z7L3 (Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0774100 PE=3 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 1.5e-24
Identity = 52/113 (46.02%), Postives = 82/113 (72.57%), Query Frame = 0


Query: 85  IELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYC 144
           +E++ I S  + D A+  + E  + +I+ WMA+WCR  IYLKP+LE++A + +P ++FY 
Sbjct: 80  VEMEEIDSMEKLDDALRWSVENKQPIIIDWMASWCRKCIYLKPRLEKIAGE-FPGVRFYF 139

Query: 145 IDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVGLYKAYLVVNDVRKMIER 198
           +DVN VP  +V R  + KMP IQLWKDG+   EV+G +KA+LV+++VR+MI++
Sbjct: 140 VDVNKVPQTVVKRGNITKMPTIQLWKDGEWAAEVIGGHKAWLVMDEVREMIQK 191

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BLAST of MELO3C012410 vs. ExPASy Swiss-Prot
Match: P80028 (Thioredoxin H-type OS=Chlamydomonas reinhardtii OX=3055 GN=TRXH PE=1 SV=3)

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-06
Identity = 28/91 (30.77%), Postives = 50/91 (54.95%), Query Frame = 0


Query: 90  ISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNM 149
           I S+  +D  +A  +E ++ +++ + A WC     + P  E L+ DY  ++ F  +DV+ 
Sbjct: 8   IDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDA 67

Query: 150 VPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 181
           V   +   AG+  MP   ++KDG K D++VG
Sbjct: 68  VA-AVAEAAGITAMPTFHVYKDGVKADDLVG 97

[Close]

BLAST of MELO3C012410 vs. ExPASy Swiss-Prot
Match: P37395 (Thioredoxin OS=Cyanidium caldarium OX=2771 GN=trxA PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.1e-05
Identity = 26/104 (25.00%), Postives = 56/104 (53.85%), Query Frame = 0


Query: 92  SELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCIDVNMVP 151
           ++  F+K + ++E   +LV++ + A WC     + P ++ LA +Y  +++   I+ +  P
Sbjct: 8   TDFSFEKEVVNSE---KLVLVDFWAPWCGPCRMISPVIDELAQEYVEQVKIVKINTDENP 67

Query: 152 HKLVVRAGLAKMPAIQLWKDGKKQDEVVGLYKAYLVVNDVRKMI 196
             +    G+  +P + L+KDGK+ D V+G      + N ++K +
Sbjct: 68  -SISAEYGIRSIPTLMLFKDGKRVDTVIGAVPKSTLTNALKKYL 107

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BLAST of MELO3C012410 vs. ExPASy TrEMBL
Match: A0A5D3CG32 (Thioredoxin-like 3-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002530 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.4e-110
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60
           MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120
           EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180
           NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180

Query: 181 LYKAYLVVNDVRKMIERELTDE 203
           LYKAYLVVNDVRKMIERELTDE
Sbjct: 181 LYKAYLVVNDVRKMIERELTDE 202

[Close]

BLAST of MELO3C012410 vs. ExPASy TrEMBL
Match: A0A1S3BGQ4 (thioredoxin-like 3-2, chloroplastic isoform X8 OS=Cucumis melo OX=3656 GN=LOC103489448 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.4e-110
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60
           MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120
           EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180
           NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180

Query: 181 LYKAYLVVNDVRKMIERELTDE 203
           LYKAYLVVNDVRKMIERELTDE
Sbjct: 181 LYKAYLVVNDVRKMIERELTDE 202

[Close]

BLAST of MELO3C012410 vs. ExPASy TrEMBL
Match: A0A1S3BG27 (thioredoxin-like 3-2, chloroplastic isoform X7 OS=Cucumis melo OX=3656 GN=LOC103489448 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.3e-108
Identity = 202/206 (98.06%), Postives = 202/206 (98.06%), Query Frame = 0


Query: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60
           MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120
           EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA----KMPAIQLWKDGKKQD 180
           NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA    KMPAIQLWKDGKKQD
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAVGLEKMPAIQLWKDGKKQD 180

Query: 181 EVVGLYKAYLVVNDVRKMIERELTDE 203
           EVVGLYKAYLVVNDVRKMIERELTDE
Sbjct: 181 EVVGLYKAYLVVNDVRKMIERELTDE 206

[Close]

BLAST of MELO3C012410 vs. ExPASy TrEMBL
Match: A0A1S3BGW0 (thioredoxin-like 3-2, chloroplastic isoform X9 OS=Cucumis melo OX=3656 GN=LOC103489448 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.3e-108
Identity = 201/202 (99.50%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60
           MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120
           EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVG 180
           NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA MPAIQLWKDGKKQDEVVG
Sbjct: 121 NYIYLKPQLERLAADYYPRLQFYCIDVNMVPHKLVVRAGLA-MPAIQLWKDGKKQDEVVG 180

Query: 181 LYKAYLVVNDVRKMIERELTDE 203
           LYKAYLVVNDVRKMIERELTDE
Sbjct: 181 LYKAYLVVNDVRKMIERELTDE 201

[Close]

BLAST of MELO3C012410 vs. ExPASy TrEMBL
Match: A0A1S3BFJ1 (thioredoxin-like 3-2, chloroplastic isoform X5 OS=Cucumis melo OX=3656 GN=LOC103489448 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.0e-108
Identity = 202/209 (96.65%), Postives = 202/209 (96.65%), Query Frame = 0


Query: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60
           MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG
Sbjct: 1   MVKALPLHLGIVKSFPKFDSSFDLPPSPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATG 60

Query: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120
           EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR
Sbjct: 61  EKTSLLGAWTQDSALQFRDESPVSIELKSISSELEFDKAIADAEERNELVILVWMANWCR 120

Query: 121 NYIYLKPQLERLAADYYP-------RLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGK 180
           NYIYLKPQLERLAADYYP       RLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGK
Sbjct: 121 NYIYLKPQLERLAADYYPSMCLMNCRLQFYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGK 180

Query: 181 KQDEVVGLYKAYLVVNDVRKMIERELTDE 203
           KQDEVVGLYKAYLVVNDVRKMIERELTDE
Sbjct: 181 KQDEVVGLYKAYLVVNDVRKMIERELTDE 209

[Close]

BLAST of MELO3C012410 vs. TAIR 10
Match: AT5G04260.1 (WCRKC thioredoxin 2 )

HSP 1 Score: 174.1 bits (440), Expect = 1.1e-43
Identity = 86/172 (50.00%), Postives = 118/172 (68.60%), Query Frame = 0


Query: 27  SPQLLSARLPGSGFNRLPLSRKFPPIFQKVSATGEKTSLLGAWTQDSALQFRDESPVSIE 86
           SP +   R   S F+R P + K+     K+    E+   +    QD  LQ  D+SPVS+E
Sbjct: 19  SPLVPPYRQTSSSFSR-PRNFKYHSFTDKICLAAERIRAVDIQKQDGGLQELDDSPVSVE 78

Query: 87  LKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQFYCID 146
           L  I  E  FD+ + DA++  E V++VWMA WCR  IYLKP+LE+LAA++YPRL+FY +D
Sbjct: 79  LGPICGESHFDQVMEDAQKLGESVVIVWMAAWCRKCIYLKPKLEKLAAEFYPRLRFYHVD 138

Query: 147 VNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVGLYKAYLVVNDVRKMIERE 199
           VN VP++LV RAG+ KMP IQLW+DG+KQ EV+G +KA+ VVN+VR+MIE +
Sbjct: 139 VNAVPYRLVSRAGVTKMPTIQLWRDGQKQAEVIGGHKAHFVVNEVREMIEND 189

[Close]

BLAST of MELO3C012410 vs. TAIR 10
Match: AT5G06690.1 (WCRKC thioredoxin 1 )

HSP 1 Score: 121.7 bits (304), Expect = 6.7e-28
Identity = 52/116 (44.83%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 82  PVSIELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQ 141
           P ++E++ I++  E D  ++ A + ++ +I+ WMA+WCR  IYLKP+LE+LAA+Y  R +
Sbjct: 93  PTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAK 152

Query: 142 FYCIDVNMVPHKLVVRAGLAKMPAIQLWKDGKKQDEVVGLYKAYLVVNDVRKMIER 198
           FY +DVN VP  LV R  ++KMP IQLWK+ + ++EV+G +K +LV+ +VR++I +
Sbjct: 153 FYYVDVNKVPQTLVKRGNISKMPTIQLWKEDEMKEEVIGGHKGWLVIEEVRELINK 208

[Close]

BLAST of MELO3C012410 vs. TAIR 10
Match: AT5G06690.2 (WCRKC thioredoxin 1 )

HSP 1 Score: 81.6 bits (200), Expect = 7.7e-16
Identity = 35/80 (43.75%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 82  PVSIELKSISSELEFDKAIADAEERNELVILVWMANWCRNYIYLKPQLERLAADYYPRLQ 141
           P ++E++ I++  E D  ++ A + ++ +I+ WMA+WCR  IYLKP+LE+LAA+Y  R +
Sbjct: 93  PTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAK 152

Query: 142 FYCIDVNMVPHKLVVRAGLA 162
           FY +DVN VP  LV R  ++
Sbjct: 153 FYYVDVNKVPQTLVKRGNIS 172

The following BLAST results are available for this feature:

BLAST of MELO3C012410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446852.1	5.0e-110	100.00	PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X8 [Cucumis melo] >TYK092...	[more]
XP_008446851.1	2.8e-108	98.06	PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X7 [Cucumis melo]	[more]
XP_008446853.1	4.7e-108	99.50	PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X9 [Cucumis melo]	[more]
XP_008446849.1	6.2e-108	96.65	PREDICTED: thioredoxin-like 3-2, chloroplastic isoform X5 [Cucumis melo]	[more]
XP_004142496.2	2.6e-106	97.03	thioredoxin-like 3-2, chloroplastic isoform X1 [Cucumis sativus] >KGN52252.1 hyp...	[more]

BLAST of MELO3C012410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZT6	1.6e-42	50.00	Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC2 PE...	[more]
Q9FG36	9.5e-27	44.83	Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE...	[more]
Q6Z7L3	1.5e-24	46.02	Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
P80028	1.1e-06	30.77	Thioredoxin H-type OS=Chlamydomonas reinhardtii OX=3055 GN=TRXH PE=1 SV=3	[more]
P37395	2.1e-05	25.00	Thioredoxin OS=Cyanidium caldarium OX=2771 GN=trxA PE=3 SV=1	[more]

BLAST of MELO3C012410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CG32	2.4e-110	100.00	Thioredoxin-like 3-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475...	[more]
A0A1S3BGQ4	2.4e-110	100.00	thioredoxin-like 3-2, chloroplastic isoform X8 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A1S3BG27	1.3e-108	98.06	thioredoxin-like 3-2, chloroplastic isoform X7 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A1S3BGW0	2.3e-108	99.50	thioredoxin-like 3-2, chloroplastic isoform X9 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A1S3BFJ1	3.0e-108	96.65	thioredoxin-like 3-2, chloroplastic isoform X5 OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of MELO3C012410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04260.1	1.1e-43	50.00	WCRKC thioredoxin 2	[more]
AT5G06690.1	6.7e-28	44.83	WCRKC thioredoxin 1	[more]
AT5G06690.2	7.7e-16	43.75	WCRKC thioredoxin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 76..192 e-value: 6.8E-14 score: 53.5
None	No IPR available	PANTHER	PTHR47192:SF4	THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC	coord: 37..199
None	No IPR available	CDD	cd02947	TRX_family	coord: 95..196 e-value: 2.19772E-12 score: 58.7237
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 93..184 e-value: 8.2E-10 score: 38.6
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 75..200 score: 8.86165
IPR044253	Thioredoxin-like 3-1/3-2	PANTHER	PTHR47192	THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC	coord: 37..199
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 87..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012410.1	MELO3C012410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009570	chloroplast stroma