MELO3C012274.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C012274.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr10: 1569570 .. 1570099 (-)
RNA-Seq ExpressionMELO3C012274.jh1
SyntenyMELO3C012274.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTAATACGGGTTCTTCTTCTACACTTCTAATCCAATCTCATTAACCTACACAAAATTAATTAAAGGTGCGGTTTTTAGATGGTGAGGGTATTGGCAGATTTCCACGGCGGAGGATTGACGATCGCTTCGCCAGTTTTTATATTTTGGGCGGTGGTGGTTTCGATTTCGATTATCACAACTGTTATATTCTCCTGCACCGGCGGCAGCGGCGCTAAAGATAAGGACACGTCCCATGCCGATACTTACGGTGGTGCTGCTTGTGCTGCCGGCTGTGGAGGCGGCTGCGGCGCTTAATCTCTTCCAACGAGAGATCGGCTAACGGAAAAAACGAATGCAAACGGGAGATTTTCACCACCAGATTGATGTAATTTCCTTTTTTTTTCTTTTTAATTCTTCTCCTTTATAGGGATTTTCAGTTTTCCTGGTTTAAGATATGTCAAACAAATTGACATATTCGATAAGAACAATGTAAAAATTCGAAATATTTGAATGAAAGTGTTCATTAAACATGTGGTGTTGTGTTTATCC

mRNA sequence

ATTTAATACGGGTTCTTCTTCTACACTTCTAATCCAATCTCATTAACCTACACAAAATTAATTAAAGGTGCGGTTTTTAGATGGTGAGGGTATTGGCAGATTTCCACGGCGGAGGATTGACGATCGCTTCGCCAGTTTTTATATTTTGGGCGGTGGTGGTTTCGATTTCGATTATCACAACTGTTATATTCTCCTGCACCGGCGGCAGCGGCGCTAAAGATAAGGACACGTCCCATGCCGATACTTACGGTGGTGCTGCTTGTGCTGCCGGCTGTGGAGGCGGCTGCGGCGCTTAATCTCTTCCAACGAGAGATCGGCTAACGGAAAAAACGAATGCAAACGGGAGATTTTCACCACCAGATTGATGTAATTTCCTTTTTTTTTCTTTTTAATTCTTCTCCTTTATAGGGATTTTCAGTTTTCCTGGTTTAAGATATGTCAAACAAATTGACATATTCGATAAGAACAATGTAAAAATTCGAAATATTTGAATGAAAGTGTTCATTAAACATGTGGTGTTGTGTTTATCC

Coding sequence (CDS)

ATGGTGAGGGTATTGGCAGATTTCCACGGCGGAGGATTGACGATCGCTTCGCCAGTTTTTATATTTTGGGCGGTGGTGGTTTCGATTTCGATTATCACAACTGTTATATTCTCCTGCACCGGCGGCAGCGGCGCTAAAGATAAGGACACGTCCCATGCCGATACTTACGGTGGTGCTGCTTGTGCTGCCGGCTGTGGAGGCGGCTGCGGCGCTTAA

Protein sequence

MVRVLADFHGGGLTIASPVFIFWAVVVSISIITTVIFSCTGGSGAKDKDTSHADTYGGAACAAGCGGGCGA
Homology
BLAST of MELO3C012274.jh1 vs. NCBI nr
Match: KAA0034584.1 (hypothetical protein E6C27_scaffold65G006000 [Cucumis melo var. makuwa] >TYK09136.1 hypothetical protein E5676_scaffold475G001270 [Cucumis melo var. makuwa])

HSP 1 Score: 134 bits (338), Expect = 1.57e-39
Identity = 70/71 (98.59%), Postives = 70/71 (98.59%), Query Frame = 0

Query: 1  MVRVLADFHGGGLTIASPVFIFWAVVVSISIITTVIFSCTGGSGAKDKDTSHADTYGGAA 60
          MVRVLADFHGGGLTIASPVFIFWAVVVSISIITTVIFSCTGGSGAKDKDTSHADT GGAA
Sbjct: 1  MVRVLADFHGGGLTIASPVFIFWAVVVSISIITTVIFSCTGGSGAKDKDTSHADTCGGAA 60

Query: 61 CAAGCGGGCGA 71
          CAAGCGGGCGA
Sbjct: 61 CAAGCGGGCGA 71

BLAST of MELO3C012274.jh1 vs. NCBI nr
Match: KGN52107.1 (hypothetical protein Csa_007826 [Cucumis sativus])

HSP 1 Score: 132 bits (333), Expect = 9.12e-39
Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 0

Query: 1  MVRVLADFHGGGLTIASPVFIFWAVVVSISIITTVIFSCTGGSGAKDKDTSHADTYGGAA 60
          MVRVL DFHGGGLTIASPV IFWAVV+SISIITTVIFSCTGGSGAKDKDTSHADTYGGAA
Sbjct: 1  MVRVLRDFHGGGLTIASPVLIFWAVVLSISIITTVIFSCTGGSGAKDKDTSHADTYGGAA 60

Query: 61 CAAGCGGGCGA 71
          CAAGCGGGCGA
Sbjct: 61 CAAGCGGGCGA 71

BLAST of MELO3C012274.jh1 vs. NCBI nr
Match: KAG6601275.1 (hypothetical protein SDJN03_06508, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 85.1 bits (209), Expect = 7.74e-20
Identity = 52/73 (71.23%), Postives = 55/73 (75.34%), Query Frame = 0

Query: 1  MVRVLADFHG---GGLTIASPVFIFWAVVVSISIITTVIFSCTGGSGAKDKDTSHADTYG 60
          MVRVL DF G   GG   A  V I WA VVSISII+TVIFSCTGG G KDK +SH+DTYG
Sbjct: 1  MVRVLRDFSGEGGGGFINAPTVLILWAAVVSISIISTVIFSCTGG-GPKDKTSSHSDTYG 60

Query: 61 GAACAAGCGGGCG 70
           AACAAGCG GCG
Sbjct: 61 -AACAAGCGAGCG 71

BLAST of MELO3C012274.jh1 vs. NCBI nr
Match: MBA0718032.1 (hypothetical protein [Gossypium laxum])

HSP 1 Score: 63.9 bits (154), Expect = 1.84e-11
Identity = 35/71 (49.30%), Postives = 48/71 (67.61%), Query Frame = 0

Query: 1  MVRVLADFHGGGLTIASPVFIFWAVVVSISIITTVIFSCTGGSGAKDKDTSHADTYGGAA 60
          MVR  AD       ++S V +FWAV+ ++S++T +IFSC GG+  +    +HADTYG + 
Sbjct: 1  MVR--ADRGASSEDLSSAVLMFWAVLAALSLVTAIIFSCAGGASKEKASATHADTYG-ST 60

Query: 61 CAAGCGGGCGA 71
          CAAGCG GCGA
Sbjct: 61 CAAGCGAGCGA 68

BLAST of MELO3C012274.jh1 vs. NCBI nr
Match: PRQ40287.1 (hypothetical protein RchiOBHm_Chr4g0434421 [Rosa chinensis])

HSP 1 Score: 63.9 bits (154), Expect = 1.89e-11
Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 0

Query: 1  MVRVLADF-HGGGLTIASPVFIFWAVVVSISIITTVIFSCTGGSGAKDK-DTSHADTYGG 60
          M R+L D   G G +++S V++FWA +V++ +++T+IFSC+ G    +K  T+H DTYG 
Sbjct: 1  MARILKDLASGSGESLSSAVYLFWAALVTLVLVSTIIFSCSDGMPKDEKTSTTHTDTYGT 60

Query: 61 AACAAGCGGGCGA 71
          A  A GCGG CGA
Sbjct: 61 ACAAGGCGGACGA 73

BLAST of MELO3C012274.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CFJ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001270 PE=4 SV=1)

HSP 1 Score: 134 bits (338), Expect = 7.62e-40
Identity = 70/71 (98.59%), Postives = 70/71 (98.59%), Query Frame = 0

Query: 1  MVRVLADFHGGGLTIASPVFIFWAVVVSISIITTVIFSCTGGSGAKDKDTSHADTYGGAA 60
          MVRVLADFHGGGLTIASPVFIFWAVVVSISIITTVIFSCTGGSGAKDKDTSHADT GGAA
Sbjct: 1  MVRVLADFHGGGLTIASPVFIFWAVVVSISIITTVIFSCTGGSGAKDKDTSHADTCGGAA 60

Query: 61 CAAGCGGGCGA 71
          CAAGCGGGCGA
Sbjct: 61 CAAGCGGGCGA 71

BLAST of MELO3C012274.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KUK0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G610410 PE=4 SV=1)

HSP 1 Score: 132 bits (333), Expect = 4.42e-39
Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 0

Query: 1  MVRVLADFHGGGLTIASPVFIFWAVVVSISIITTVIFSCTGGSGAKDKDTSHADTYGGAA 60
          MVRVL DFHGGGLTIASPV IFWAVV+SISIITTVIFSCTGGSGAKDKDTSHADTYGGAA
Sbjct: 1  MVRVLRDFHGGGLTIASPVLIFWAVVLSISIITTVIFSCTGGSGAKDKDTSHADTYGGAA 60

Query: 61 CAAGCGGGCGA 71
          CAAGCGGGCGA
Sbjct: 61 CAAGCGGGCGA 71

BLAST of MELO3C012274.jh1 vs. ExPASy TrEMBL
Match: A0A7J9A2G2 (Uncharacterized protein OS=Gossypium laxum OX=34288 GN=Golax_005801 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 8.92e-12
Identity = 35/71 (49.30%), Postives = 48/71 (67.61%), Query Frame = 0

Query: 1  MVRVLADFHGGGLTIASPVFIFWAVVVSISIITTVIFSCTGGSGAKDKDTSHADTYGGAA 60
          MVR  AD       ++S V +FWAV+ ++S++T +IFSC GG+  +    +HADTYG + 
Sbjct: 1  MVR--ADRGASSEDLSSAVLMFWAVLAALSLVTAIIFSCAGGASKEKASATHADTYG-ST 60

Query: 61 CAAGCGGGCGA 71
          CAAGCG GCGA
Sbjct: 61 CAAGCGAGCGA 68

BLAST of MELO3C012274.jh1 vs. ExPASy TrEMBL
Match: A0A2P6R1H6 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0434421 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 9.15e-12
Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 0

Query: 1  MVRVLADF-HGGGLTIASPVFIFWAVVVSISIITTVIFSCTGGSGAKDK-DTSHADTYGG 60
          M R+L D   G G +++S V++FWA +V++ +++T+IFSC+ G    +K  T+H DTYG 
Sbjct: 1  MARILKDLASGSGESLSSAVYLFWAALVTLVLVSTIIFSCSDGMPKDEKTSTTHTDTYGT 60

Query: 61 AACAAGCGGGCGA 71
          A  A GCGG CGA
Sbjct: 61 ACAAGGCGGACGA 73

BLAST of MELO3C012274.jh1 vs. ExPASy TrEMBL
Match: A0A5D2IB54 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D12G172100v1 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.27e-11
Identity = 36/71 (50.70%), Postives = 48/71 (67.61%), Query Frame = 0

Query: 1  MVRVLADFHGGGLTIASPVFIFWAVVVSISIITTVIFSCTGGSGAKDKDTSHADTYGGAA 60
          MVR  AD       ++S V +FWAV+ ++S+IT +IFSC GG+  +    +HADTYG + 
Sbjct: 1  MVR--ADRGASTEDLSSAVLMFWAVLAALSLITAIIFSCAGGASKEKASATHADTYG-ST 60

Query: 61 CAAGCGGGCGA 71
          CAAGCG GCGA
Sbjct: 61 CAAGCGAGCGA 68

BLAST of MELO3C012274.jh1 vs. TAIR 10
Match: AT1G68238.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 40.4 bits (93), Expect = 6.9e-04
Identity = 23/48 (47.92%), Postives = 30/48 (62.50%), Query Frame = 0

Query: 23 WAVVVSISIITTVIFSCTGGSGAKDKDTSHADTYGGAACAAGCGGGCG 71
          WA VV+ S+I  VIFSC+  +     +    D   G++CAAGCGGGCG
Sbjct: 21 WAAVVAFSVIAAVIFSCSDRASKPHTN----DDVNGSSCAAGCGGGCG 64

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0034584.11.57e-3998.59hypothetical protein E6C27_scaffold65G006000 [Cucumis melo var. makuwa] >TYK0913... [more]
KGN52107.19.12e-3995.77hypothetical protein Csa_007826 [Cucumis sativus][more]
KAG6601275.17.74e-2071.23hypothetical protein SDJN03_06508, partial [Cucurbita argyrosperma subsp. sorori... [more]
MBA0718032.11.84e-1149.30hypothetical protein [Gossypium laxum][more]
PRQ40287.11.89e-1146.58hypothetical protein RchiOBHm_Chr4g0434421 [Rosa chinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CFJ47.62e-4098.59Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KUK04.42e-3995.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G610410 PE=4 SV=1[more]
A0A7J9A2G28.92e-1249.30Uncharacterized protein OS=Gossypium laxum OX=34288 GN=Golax_005801 PE=4 SV=1[more]
A0A2P6R1H69.15e-1246.58Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0434421 PE=4... [more]
A0A5D2IB541.27e-1150.70Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D12G172100v1 P... [more]
Match NameE-valueIdentityDescription
AT1G68238.16.9e-0447.92unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37199:SF5TRANSMEMBRANE PROTEINcoord: 1..71
NoneNo IPR availablePANTHERPTHR37199TRANSMEMBRANE PROTEINcoord: 1..71

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C012274.jh1.t1MELO3C012274.jh1.t1mRNA