MELO3C012254.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C012254.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	50S ribosomal protein L15
Location	chr10: 1695528 .. 1699666 (+)
RNA-Seq Expression	MELO3C012254.jh1
Synteny	MELO3C012254.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGCAATAACAAAGGCCCATTAGGGCCCGAATCGTCATATTGCTAAGAAAAGAGAAAGCAGAGAACGTCAACTGTAATCATCCAGTTCCAGCTTATCCATGGCTGCCCTCTTTTCCTTATCTTCAACTTCCTTGACCAGAACGGCCACTGCTCTTCCTTATCCAACCACTTCCTTCAAGGTATGTCACATCACCTTCTCCATTTCTTTCTTAATTTCAAATTCAACTCCTTATCTCACTTCAATTACCTGGTGTGTTGATTCTTTTCCAGGGAAATGTTAGTATTCTCAACTCAAAACACCTCAGCATTTCTTCACCCAAACTCAAATTTAAGGCTGTAGATGGTAAACACTTGGTTGTTCGCAACCAGGCTGCTGCTTCTTCCCTGTATGCCTCCCCCGCCGACAATGTGCGGTTCCGTCTTGACAACCTCGGACCACAGCCGGGTTCGAGGAAGAGGGGCAAGAGAAAGGGGAGAGGTATATCGGCGGGACAGGGTGGTAGCTGTGGGTTTGGAATGAGAGGACAAAAATCAAGGTCTGGACCTGGTGTAAGAAAAGGATTCGAAGGTGGTCAAATGCCTCTTTATCGGAGAATCCCCAAACTTAGAGGAATTGCAGGAGGTAATTTCTATCACATTCTTCTGCTTAGTTGCCTTTTGTATATGAATTTTAGAACTCTACGTATCTTAGCTTGCTAGTTCGGTGCAATCGCTATTGCTAATTCTGCTATAGATCATAGTTGCTTCATTGAGGGAGAGTTCAAATTATCCTTTTCACTCTTATCCTGAAAACTTCCGTTCCATTTATTTTTACCTATTTAGTGCTATAGATTATGGCTGCTTCATCGAGGGTGAGTTCCAATCATCTTTTTCACTCTTATCCTGAAAACTTCGTTCCATTTATTTTTACCTATTTAGTGCTGTAGAATATGGTTGCTTCATTGAGGGAGACTCGGAGCGTTCCAATTTTCTTTTCATCCTTATCCCGAAAACTTCCGTTCCATTTATTTTTACCTATTTAGTACTTGGGAGGTTGTTGGAGCAATTGCTAACAGTTGTTTGGAATTATTGCACTTGAAATTTATGTAATTCCTTATTCCTCGATAGGAGGGCATTTGGCCTTGTTAGTTTTCCGTAGGCTAGGGCAAGGGAGAAAAGTAGCCACTCTATAGTTGCGCATCCTTCTCCCAGTTTCTTGAAACGTAATCGATAATTTGTACTATGGTGTTTGGGCTAGAGTGATTAGGAAGCTGTCATGGTTCATGATGACGATCTTCAAGTATCCCACAGCGTGGAAGATTGAATATTCTTCAAACTGGATATAGGAGGCTGTTAATTTACTTTTTGCTTTCTGGGAAATGGTAATGATGTATAAATGAGAAGGGGATTACGACAATGAGAGGAATAGATGATCTCTCAACCTAGTCAAAAGAATTCAGAAAAGCTCTCATATTGGGTTGAGTGTCTAATAAAGTGAAATTTCTCAAGCTCCCATACAGAGTACAAAATCTATGAACCCAACAAAAATCTCTCTATAACGTAATATCTTGTATAGTTACCCTTGTTCTTGTTTACTAGCTATGCCTTTGGTTAGAATGGTTAGTGTATGAGAGGTATTTCAATCTCATGTAAAGAGAGTGGATTTTAACGATTTCCTTCTTGTTTAGCTTTGTGGGAGGGGGTTTCCTCAACCCCCGCCCTTAGTTTTTTCTATTAGCTATCTTGATGAATATATTCCAATGTTTTTTATTAAAAGAAAGGTTTTTTCCTCTTCCCGTTTCTCTTGTCATTCTTTACTCTACGTTTTTATACAAAAAAACATTCCAAAATGATATATCGTGTATTGTATTTGTTTTTCTTGTGGTCACCTTTGTTTGAACTGAAGATATTCGAGCTGAACAATTGCTTTTGTTTTCAAGGTATGCATGCTGGGTTACCTAAATACGTGCCAGTGAATCTGAAAGACATTGAAGAGGCAGGATTTCAGGAAGGAGAAGAGGTCTCTTTGGAAACTTTAAAAGAGAAGGGTTTGATCAACCCATCAGGAAGAGAAAGGAAACTCCCATTAAAGGTACTAATGTCTCAAGTATCTACATTGTTAAGATCACACAAGTTGATATCAAAATTGATATTGTGATGCACTTTTCTACTCCAAGTGAAATCAAAACTGGGTGATTAAAACAGATGTTTCTTAAATGATCAAAGTTCTGGTGACTGATTCATAATTGTTTAAACTTTGTCTTTCCTTCAGATTTTAGCGGATGGAGAGCTAAGTGTAAAGCTAAATATCAAAGCTCGGGCCTTTTCATCAGCAGCAAAAGAGAAACTTGAAGCTGCTGGCTGCTCCTTAACTGTATTACCTGGCCGAAAGAAGTGGGTTAAGCCATCAGTGGCTAAGAACCTCGCACGTGCGGAGGAATACTTTGCAAAGAAAAAGGCTGCGGCAGCTGCTGCAGAACAGTCATCTGCTTGAATAATTGTAAAGTTGCAGGTGGTGACAAATTCCAGGTTAAATCTCTTCCTTAGTAAGTTTGGGCCTTAGCTAGTTTGTGGGCTTTAAGTCCAATTCCATGCTGTCTGATTGTATTATTGATCGATTTCTAGAGCAAAAATTTTCTCTGAAATATTCGTGCTCTTTTACTTTAAACTGCAAGAAAAGAGTAAAAGCAATTTTCTTTCTTTTTTTTTTTCTTTAAAAAAAAGAGTCAATTCAGAAATGGCCGATTTCCAGAACATAGTTTAATTGGATTAGGCTTATACTCACGAGGTTTGACCAAGAGGTAAGAGGTTTTTGGATCTCATCAAATCGCATCAATCCCAAATCTAATTCAATTAACAAAAAGAAGGAAAAAAAACTCATAAATAGTGGTTTGAATATGAGTTGATTAGCGTGGAGAAGAGGAAATCAGGTATGGATGATTCAGTTAATTTAGTCGTTTCCATCATTCTCAATCATGTCATCCACTAAGGTACGAGTCTAGTCTTGGACCCATTCAAACATTTCTGCTTATCTAAACTAACCAAATTCGGATCAGTCTGGATCTGATAAGCTGAACTGTTGAACTTTAAAATTGATTTGTATTGTTTAAAAAAATTGCAAAATAGAATTAGACTAGGGAGCACAAATATATTTAAATCAGAGCTATCCTCTTTAGCATATGGGTAGGAATTTCAATAGAGCTATGGGGTTGATCCTACTTGGATACTAGGAATCTGGTACAGGATAGCAATAGTCAAATTAAAACGTGTGAATTTTGAAATTTGTGTTCAGTTCCTCACGATTGATTGGTTCAATAAGTAATGTGCACTGTTGTTTTGGATGCAAGGCATGTGCTTTACTAATCACATATTGCTGGATGACTCATTTCCTCTCATGTCAATAATGCCTGTTTGCGTCAAGAGAACTTGAAAGCGACCACAAAACAAAAGCTGCATCACTCATGGTGGTTCCCTTTCTCCATTATTCTAATAACTTCGGATTTTCTTTCCATCTCTTTTACTCTCTTTCTCTCTCTAAAGCTTTGTTTTGATGTAAAATCCAATTACCCACGAGCCAACAATGATAGCCTTTCCAAACAAACTAGGTCAATTCTGTCTTCCAAAACCCACAGAAATCCTTCATCAGCTTGCCCGTTACATACACTCTCACAATATGCTGACTACGCCGCACATTACCTTATATGGGAATGGAATTTTAGAGCCTTTTCTATATACCTTTGTTGGGAACTTATTGTTAATTAGTGTTGAGTATCTTATATTGCTGTTGAGCAAAACGGAGTTGAAGTTTTACACGTTTTCTTTGACCAAATTGAGTGGACTTCCACGTGGAAGTCCACATTCTTGGTTTTTTTTTTTTTTATTATTCATTTCTTTCTAGTACCATCCTTTAGAGTTTAGACCATACTGATTACAATATTTAAGGTGTTTTTTTTAGTTCAGCGAATGGTCGATTGAACTATGGACTTCAAAATAGTAATGAGTGTGTATCCACTCAACCATATTCTGATTTTTCTAATGGATTAAATTATAAGTTTAGTTTCAGTATTTCAGTGTGGCTTGTTATTTGGGCCTCTAAATAGAAGTATTGATGATTTAAAACGTTATTAGATTATTGTAACTTTTCAAAATTTAAGAATAAA

mRNA sequence

TGGCAATAACAAAGGCCCATTAGGGCCCGAATCGTCATATTGCTAAGAAAAGAGAAAGCAGAGAACGTCAACTGTAATCATCCAGTTCCAGCTTATCCATGGCTGCCCTCTTTTCCTTATCTTCAACTTCCTTGACCAGAACGGCCACTGCTCTTCCTTATCCAACCACTTCCTTCAAGGGAAATGTTAGTATTCTCAACTCAAAACACCTCAGCATTTCTTCACCCAAACTCAAATTTAAGGCTGTAGATGGTAAACACTTGGTTGTTCGCAACCAGGCTGCTGCTTCTTCCCTGTATGCCTCCCCCGCCGACAATGTGCGGTTCCGTCTTGACAACCTCGGACCACAGCCGGGTTCGAGGAAGAGGGGCAAGAGAAAGGGGAGAGGTATATCGGCGGGACAGGGTGGTAGCTGTGGGTTTGGAATGAGAGGACAAAAATCAAGGTCTGGACCTGGTGTAAGAAAAGGATTCGAAGGTGGTCAAATGCCTCTTTATCGGAGAATCCCCAAACTTAGAGGAATTGCAGGAGATTATGGCTGCTTCATCGAGGAATATGGTTGCTTCATTGAGGGAGACTCGGAGCGTTCCAATTTTCTTTTCATCCTTATCCCGAAAACTTCCGTTCCATTTATTTTTACCTATTTAGCTAGGGCAAGGGAGAAAAGTAGCCACTCTATAGTTGCGCATCCTTCTCCCAGTTTCTTGAAACGTATGCATGCTGGGTTACCTAAATACGTGCCAGTGAATCTGAAAGACATTGAAGAGGCAGGATTTCAGGAAGGAGAAGAGGTCTCTTTGGAAACTTTAAAAGAGAAGGGTTTGATCAACCCATCAGGAAGAGAAAGGAAACTCCCATTAAAGATTTTAGCGGATGGAGAGCTAAGTGTAAAGCTAAATATCAAAGCTCGGGCCTTTTCATCAGCAGCAAAAGAGAAACTTGAAGCTGCTGGCTGCTCCTTAACTGTATTACCTGGCCGAAAGAAGTGGGTTAAGCCATCAGTGGCTAAGAACCTCGCACGTGCGGAGGAATACTTTGCAAAGAAAAAGGCTGCGGCAGCTGCTGCAGAACAGTCATCTGCTTGAATAATTGTAAAGTTGCAGGTGGTGACAAATTCCAGGCATGTGCTTTACTAATCACATATTGCTGGATGACTCATTTCCTCTCATGTCAATAATGCCTGTTTGCGTCAAGAGAACTTGAAAGCGACCACAAAACAAAAGCTGCATCACTCATGGTGGTTCCCTTTCTCCATTATTCTAATAACTTCGGATTTTCTTTCCATCTCTTTTACTCTCTTTCTCTCTCTAAAGCTTTGTTTTGATGTAAAATCCAATTACCCACGAGCCAACAATGATAGCCTTTCCAAACAAACTAGGTCAATTCTGTCTTCCAAAACCCACAGAAATCCTTCATCAGCTTGCCCGTTACATACACTCTCACAATATGCTGACTACGCCGCACATTACCTTATATGGGAATGGAATTTTAGAGCCTTTTCTATATACCTTTGTTGGGAACTTATTGTTAATTAGTGTTGAGTATCTTATATTGCTGTTGAGCAAAACGGAGTTGAAGTTTTACACGTTTTCTTTGACCAAATTGAGTGGACTTCCACGTGGAAGTCCACATTCTTGGTTTTTTTTTTTTTTATTATTCATTTCTTTCTAGTACCATCCTTTAGAGTTTAGACCATACTGATTACAATATTTAAGGTGTTTTTTTTAGTTCAGCGAATGGTCGATTGAACTATGGACTTCAAAATAGTAATGAGTGTGTATCCACTCAACCATATTCTGATTTTTCTAATGGATTAAATTATAAGTTTAGTTTCAGTATTTCAGTGTGGCTTGTTATTTGGGCCTCTAAATAGAAGTATTGATGATTTAAAACGTTATTAGATTATTGTAACTTTTCAAAATTTAAGAATAAA

Coding sequence (CDS)

ATGGCTGCCCTCTTTTCCTTATCTTCAACTTCCTTGACCAGAACGGCCACTGCTCTTCCTTATCCAACCACTTCCTTCAAGGGAAATGTTAGTATTCTCAACTCAAAACACCTCAGCATTTCTTCACCCAAACTCAAATTTAAGGCTGTAGATGGTAAACACTTGGTTGTTCGCAACCAGGCTGCTGCTTCTTCCCTGTATGCCTCCCCCGCCGACAATGTGCGGTTCCGTCTTGACAACCTCGGACCACAGCCGGGTTCGAGGAAGAGGGGCAAGAGAAAGGGGAGAGGTATATCGGCGGGACAGGGTGGTAGCTGTGGGTTTGGAATGAGAGGACAAAAATCAAGGTCTGGACCTGGTGTAAGAAAAGGATTCGAAGGTGGTCAAATGCCTCTTTATCGGAGAATCCCCAAACTTAGAGGAATTGCAGGAGATTATGGCTGCTTCATCGAGGAATATGGTTGCTTCATTGAGGGAGACTCGGAGCGTTCCAATTTTCTTTTCATCCTTATCCCGAAAACTTCCGTTCCATTTATTTTTACCTATTTAGCTAGGGCAAGGGAGAAAAGTAGCCACTCTATAGTTGCGCATCCTTCTCCCAGTTTCTTGAAACGTATGCATGCTGGGTTACCTAAATACGTGCCAGTGAATCTGAAAGACATTGAAGAGGCAGGATTTCAGGAAGGAGAAGAGGTCTCTTTGGAAACTTTAAAAGAGAAGGGTTTGATCAACCCATCAGGAAGAGAAAGGAAACTCCCATTAAAGATTTTAGCGGATGGAGAGCTAAGTGTAAAGCTAAATATCAAAGCTCGGGCCTTTTCATCAGCAGCAAAAGAGAAACTTGAAGCTGCTGGCTGCTCCTTAACTGTATTACCTGGCCGAAAGAAGTGGGTTAAGCCATCAGTGGCTAAGAACCTCGCACGTGCGGAGGAATACTTTGCAAAGAAAAAGGCTGCGGCAGCTGCTGCAGAACAGTCATCTGCTTGA

Protein sequence

MAALFSLSSTSLTRTATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQAAASSLYASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGDYGCFIEEYGCFIEGDSERSNFLFILIPKTSVPFIFTYLARAREKSSHSIVAHPSPSFLKRMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKKKAAAAAAEQSSA

Homology

[Close]

BLAST of MELO3C012254.jh1 vs. NCBI nr
Match: XP_008446604.1 (PREDICTED: 50S ribosomal protein L15, chloroplastic [Cucumis melo] >XP_008446605.1 PREDICTED: 50S ribosomal protein L15, chloroplastic [Cucumis melo])

HSP 1 Score: 471 bits (1211), Expect = 3.20e-165
Identity = 267/328 (81.40%), Postives = 267/328 (81.40%), Query Frame = 0


Query: 1   MAALFSLSSTSLTRTATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQ 60
           MAALFSLSSTSLTRTATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQ
Sbjct: 1   MAALFSLSSTSLTRTATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQ 60

Query: 61  AAASSLYASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLYASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLYASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGDYGCFIEEYGCFIEGDSERSNFLFILIPKTSVPFIF 180
           VRKGFEGGQMPLYRRIPKLRGIAG                                    
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGG----------------------------------- 180

Query: 181 TYLARAREKSSHSIVAHPSPSFLKRMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK 240
                                    MHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK
Sbjct: 181 -------------------------MHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK 240

Query: 241 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 300
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP
Sbjct: 241 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 268

Query: 301 SVAKNLARAEEYFAKKKAAAAAAEQSSA 328
           SVAKNLARAEEYFAKKKAAAAAAEQSSA
Sbjct: 301 SVAKNLARAEEYFAKKKAAAAAAEQSSA 268

[Close]

BLAST of MELO3C012254.jh1 vs. NCBI nr
Match: XP_004135093.1 (50S ribosomal protein L15, chloroplastic [Cucumis sativus] >KGN52087.1 hypothetical protein Csa_008981 [Cucumis sativus])

HSP 1 Score: 450 bits (1158), Expect = 3.76e-157
Identity = 257/328 (78.35%), Postives = 263/328 (80.18%), Query Frame = 0


Query: 1   MAALFSLSSTSLTRTATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQ 60
           MAALFSLSS SLTRTATALPYPTTSFKGNV+ILNSKHLSISS +LK K+VDGKHLVVRNQ
Sbjct: 1   MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQ 60

Query: 61  AAASSLYASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSL ASPA+NVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGDYGCFIEEYGCFIEGDSERSNFLFILIPKTSVPFIF 180
           VRKGFEGGQMPLYRRIPKLRGIAG                                    
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGG----------------------------------- 180

Query: 181 TYLARAREKSSHSIVAHPSPSFLKRMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK 240
                                    MHAGLPKYVPVNLKDIEEAGFQEGEEVSLE+LKEK
Sbjct: 181 -------------------------MHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEK 240

Query: 241 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 300
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP
Sbjct: 241 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 268

Query: 301 SVAKNLARAEEYFAKKKAAAAAAEQSSA 328
           SVAKNLARAEEYFAKKKAAAAAAEQ+SA
Sbjct: 301 SVAKNLARAEEYFAKKKAAAAAAEQASA 268

[Close]

BLAST of MELO3C012254.jh1 vs. NCBI nr
Match: KAA0034559.1 (50S ribosomal protein L15 [Cucumis melo var. makuwa] >TYK09112.1 50S ribosomal protein L15 [Cucumis melo var. makuwa])

HSP 1 Score: 450 bits (1158), Expect = 9.36e-156
Identity = 253/314 (80.57%), Postives = 253/314 (80.57%), Query Frame = 0


Query: 15  TATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQAAASSLYASPADNV 74
           TATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQAAASSLYASPADNV
Sbjct: 105 TATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQAAASSLYASPADNV 164

Query: 75  RFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYR 134
           RFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYR
Sbjct: 165 RFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYR 224

Query: 135 RIPKLRGIAGDYGCFIEEYGCFIEGDSERSNFLFILIPKTSVPFIFTYLARAREKSSHSI 194
           RIPKLRGIAG                                                  
Sbjct: 225 RIPKLRGIAGG------------------------------------------------- 284

Query: 195 VAHPSPSFLKRMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPL 254
                      MHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPL
Sbjct: 285 -----------MHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPL 344

Query: 255 KILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFA 314
           KILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFA
Sbjct: 345 KILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFA 358

Query: 315 KKKAAAAAAEQSSA 328
           KKKAAAAAAEQSSA
Sbjct: 405 KKKAAAAAAEQSSA 358

[Close]

BLAST of MELO3C012254.jh1 vs. NCBI nr
Match: XP_038891383.1 (50S ribosomal protein L15, chloroplastic [Benincasa hispida])

HSP 1 Score: 432 bits (1110), Expect = 6.81e-150
Identity = 246/323 (76.16%), Postives = 251/323 (77.71%), Query Frame = 0


Query: 1   MAALFSLSSTSLTRTATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQ 60
           MAAL SLSSTSLTRTATALPYPTTSFKGNV ILN K L+ISS +LKFK  DGKHLVVRNQ
Sbjct: 1   MAALLSLSSTSLTRTATALPYPTTSFKGNVKILNPKQLTISSLRLKFKVGDGKHLVVRNQ 60

Query: 61  AAASSLYASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           A ASSL ASP ++VRFRLDNLGPQPGSRK+GKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  APASSLSASPVESVRFRLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGDYGCFIEEYGCFIEGDSERSNFLFILIPKTSVPFIF 180
           VRKGFEGGQMPLYRRIPKLRGIAG                                    
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGG----------------------------------- 180

Query: 181 TYLARAREKSSHSIVAHPSPSFLKRMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK 240
                                    MHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK
Sbjct: 181 -------------------------MHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK 240

Query: 241 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 300
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP
Sbjct: 241 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 263

Query: 301 SVAKNLARAEEYFAKKKAAAAAA 323
           SVAKNLARAEEYFAKKKAAAA A
Sbjct: 301 SVAKNLARAEEYFAKKKAAAATA 263

[Close]

BLAST of MELO3C012254.jh1 vs. NCBI nr
Match: XP_022984826.1 (50S ribosomal protein L15, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 417 bits (1073), Expect = 3.12e-144
Identity = 240/325 (73.85%), Postives = 249/325 (76.62%), Query Frame = 0


Query: 1   MAALFSLSSTSLTRTATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQ 60
           MAAL SLSS+SLTRTA ALP+PTTSFKGNV ILNSK  S SS KLKFK  DGK LVVR+Q
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60

Query: 61  AAASSLYASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSL ASP ++VRFRLDNLGPQ GSRK+GKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGDYGCFIEEYGCFIEGDSERSNFLFILIPKTSVPFIF 180
           VRKGFEGGQMPLYRRIPKLRGIAG                                    
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGG----------------------------------- 180

Query: 181 TYLARAREKSSHSIVAHPSPSFLKRMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK 240
                                    MHAGLPKYVPVNLKDIE AGFQEGEEVSLE+LKEK
Sbjct: 181 -------------------------MHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 240

Query: 241 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 300
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEA GCSLTVLPGRKKWVKP
Sbjct: 241 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 265

Query: 301 SVAKNLARAEEYFAKKKAAAAAAEQ 325
           SVAKNLARA+EYFAKK+AAAAAAEQ
Sbjct: 301 SVAKNLARADEYFAKKRAAAAAAEQ 265

[Close]

BLAST of MELO3C012254.jh1 vs. ExPASy Swiss-Prot
Match: P22798 (50S ribosomal protein L15, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL15 PE=1 SV=3)

HSP 1 Score: 303.5 bits (776), Expect = 2.9e-81
Identity = 185/334 (55.39%), Postives = 220/334 (65.87%), Query Frame = 0


Query: 1   MAALFSLSSTSLTRTATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAV---DGKHLVV 60
           MA+L SLSST    TA +  YP+++FKGN++       + +  KL  + +   +   LVV
Sbjct: 1   MASLLSLSSTP-PSTANSNNYPSSTFKGNINNFRINPFNFAPLKLHLRNIVKKESTRLVV 60

Query: 61  RNQAAASSLYASPA----DNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQ 120
              A+ASS   SP+       RFRLDNLGPQPGSRK+GKRKGRG +AGQGGSCGFGMRGQ
Sbjct: 61  --VASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQ 120

Query: 121 KSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGDYGCFIEEYGCFIEGDSERSNFLFILIPK 180
           KSRSGPG+ +GFEGGQMPLYRRIPKLRGIAG                             
Sbjct: 121 KSRSGPGIMRGFEGGQMPLYRRIPKLRGIAGG---------------------------- 180

Query: 181 TSVPFIFTYLARAREKSSHSIVAHPSPSFLKRMHAGLPKYVPVNLKDIEEAGFQEGEEVS 240
                                           M AGLPKYVP+NL+DIE AGF+EGEEVS
Sbjct: 181 --------------------------------MRAGLPKYVPINLRDIEVAGFKEGEEVS 240

Query: 241 LETLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPG 300
           LE+LK KG+INPSGRER+LPLKIL +GELS KL IKARAFS +AKEKLEAAGCS+TVLPG
Sbjct: 241 LESLKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPG 271

Query: 301 RKKWVKPSVAKNLARAEEYFAKKKAAAAAAEQSS 328
           RKK++K SV KNLARA+EYFAKK+AA+A+  +S+
Sbjct: 301 RKKYIKESVRKNLARADEYFAKKRAASASEAESA 271

[Close]

BLAST of MELO3C012254.jh1 vs. ExPASy Swiss-Prot
Match: P25873 (50S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL15 PE=1 SV=2)

HSP 1 Score: 301.2 bits (770), Expect = 1.4e-80
Identity = 190/334 (56.89%), Postives = 213/334 (63.77%), Query Frame = 0


Query: 1   MAALFSLSSTSLT-RTATALPYPTTSFKGNVSILNSKHLSISSPKLK--FKAVDGKH--- 60
           MA   S+SS  LT R    L   +TSFKGNVS+L +    I S KL    K  + +    
Sbjct: 1   MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFAR 60

Query: 61  --LVVRNQAAASSLYASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRG 120
             +VV   AA SS   +P    RFRLDNLGPQPGSRK+ KRKGRGISAGQG SCGFGMRG
Sbjct: 61  PLVVVSQTAATSSAVVAPE---RFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRG 120

Query: 121 QKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGDYGCFIEEYGCFIEGDSERSNFLFILIP 180
           QKSRSGPG+ +GFEGGQ  LYRR+PKLRGIAG                            
Sbjct: 121 QKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGG--------------------------- 180

Query: 181 KTSVPFIFTYLARAREKSSHSIVAHPSPSFLKRMHAGLPKYVPVNLKDIEEAGFQEGEEV 240
                                            M +GLPKY+PVN+KDIE AGFQEG+EV
Sbjct: 181 ---------------------------------MRSGLPKYLPVNIKDIETAGFQEGDEV 240

Query: 241 SLETLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLP 300
           SLETLK+KGLINPSGRERKLPLKIL  GELS+KL  KARAFS+ AKEKLEA+GC+LTVLP
Sbjct: 241 SLETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLP 271

Query: 301 GRKKWVKPSVAKNLARAEEYFAKKKAAAAAAEQS 327
           GRKKWVKPSVAKN ARA+EYFAKK+AAAA A  S
Sbjct: 301 GRKKWVKPSVAKNQARADEYFAKKRAAAAEAATS 271

[Close]

BLAST of MELO3C012254.jh1 vs. ExPASy Swiss-Prot
Match: P31165 (50S ribosomal protein L15, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=RPL15 PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 9.2e-80
Identity = 185/318 (58.18%), Postives = 207/318 (65.09%), Query Frame = 0


Query: 7   LSSTSLTRTATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQAAASSL 66
           +S+ SL    ++LP   + FKGNV  L +K      P LK +    +  VV N+AA++  
Sbjct: 1   MSAASLI-PVSSLPSLASPFKGNVKTLVAK--PCLCPCLKIQRTKLRVSVV-NKAASAYN 60

Query: 67  YASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFE 126
             S  +NVRFRLDNLGPQPGSRKR KRKGRGI+AGQG SCGFGMRGQKSRSGPG+ +GFE
Sbjct: 61  VKSSGENVRFRLDNLGPQPGSRKRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGFE 120

Query: 127 GGQMPLYRRIPKLRGIAGDYGCFIEEYGCFIEGDSERSNFLFILIPKTSVPFIFTYLARA 186
           GGQMPLYRR+PKLRGIAG                                          
Sbjct: 121 GGQMPLYRRLPKLRGIAGG----------------------------------------- 180

Query: 187 REKSSHSIVAHPSPSFLKRMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPS 246
                              MHAGLPKYV VNL DIE AGFQ+GEEVSLETLK K +INPS
Sbjct: 181 -------------------MHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVINPS 240

Query: 247 GRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNL 306
           GRERKLPLKILADGELS KL IKA AFS++AKEKLE AGCSL VLPGRKKWVKPSVAKNL
Sbjct: 241 GRERKLPLKILADGELSKKLTIKAGAFSTSAKEKLEYAGCSLIVLPGRKKWVKPSVAKNL 254

Query: 307 ARAEEYFAKKKAAAAAAE 325
           ARAEEYFAKK+    A+E
Sbjct: 301 ARAEEYFAKKRGGETASE 254

[Close]

BLAST of MELO3C012254.jh1 vs. ExPASy Swiss-Prot
Match: P31160 (50S ribosomal protein L15 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=rplO PE=3 SV=2)

HSP 1 Score: 122.9 bits (307), Expect = 6.9e-27
Identity = 86/215 (40.00%), Postives = 111/215 (51.63%), Query Frame = 0


Query: 77  RLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 136
           +LDNL PQPG++KR +R GRGI+AGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+
Sbjct: 2   KLDNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRV 61

Query: 137 PKLRGIAGDYGCFIEEYGCFIEGDSERSNFLFILIPKTSVPFIFTYLARAREKSSHSIVA 196
           PKL+                           F LI +                       
Sbjct: 62  PKLKH--------------------------FPLINRKF--------------------- 121

Query: 197 HPSPSFLKRMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKI 256
                           Y  VN+  +  AG   G EV+LE+L   G++     +   PLKI
Sbjct: 122 ----------------YTVVNVGAL--AGLAAGTEVTLESLMAVGIVT----QNDGPLKI 147

Query: 257 LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVL 292
           L DGELSV L++ A AF++ A++K+EAAG S+ ++
Sbjct: 182 LGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147

[Close]

BLAST of MELO3C012254.jh1 vs. ExPASy Swiss-Prot
Match: Q5N0U8 (50S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=rplO PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 6.9e-27
Identity = 86/215 (40.00%), Postives = 111/215 (51.63%), Query Frame = 0


Query: 77  RLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRI 136
           +LDNL PQPG++KR +R GRGI+AGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+
Sbjct: 2   KLDNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRV 61

Query: 137 PKLRGIAGDYGCFIEEYGCFIEGDSERSNFLFILIPKTSVPFIFTYLARAREKSSHSIVA 196
           PKL+                           F LI +                       
Sbjct: 62  PKLKH--------------------------FPLINRKF--------------------- 121

Query: 197 HPSPSFLKRMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPLKI 256
                           Y  VN+  +  AG   G EV+LE+L   G++     +   PLKI
Sbjct: 122 ----------------YTVVNVGAL--AGLAAGTEVTLESLMAVGIVT----QNDGPLKI 147

Query: 257 LADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVL 292
           L DGELSV L++ A AF++ A++K+EAAG S+ ++
Sbjct: 182 LGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147

[Close]

BLAST of MELO3C012254.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BFG1 (50S ribosomal protein L15, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489288 PE=3 SV=1)

HSP 1 Score: 471 bits (1211), Expect = 1.55e-165
Identity = 267/328 (81.40%), Postives = 267/328 (81.40%), Query Frame = 0


Query: 1   MAALFSLSSTSLTRTATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQ 60
           MAALFSLSSTSLTRTATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQ
Sbjct: 1   MAALFSLSSTSLTRTATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQ 60

Query: 61  AAASSLYASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSLYASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLYASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGDYGCFIEEYGCFIEGDSERSNFLFILIPKTSVPFIF 180
           VRKGFEGGQMPLYRRIPKLRGIAG                                    
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGG----------------------------------- 180

Query: 181 TYLARAREKSSHSIVAHPSPSFLKRMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK 240
                                    MHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK
Sbjct: 181 -------------------------MHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK 240

Query: 241 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 300
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP
Sbjct: 241 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 268

Query: 301 SVAKNLARAEEYFAKKKAAAAAAEQSSA 328
           SVAKNLARAEEYFAKKKAAAAAAEQSSA
Sbjct: 301 SVAKNLARAEEYFAKKKAAAAAAEQSSA 268

[Close]

BLAST of MELO3C012254.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KUI5 (Ribosomal_L18e/L15P domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G609730 PE=3 SV=1)

HSP 1 Score: 450 bits (1158), Expect = 1.82e-157
Identity = 257/328 (78.35%), Postives = 263/328 (80.18%), Query Frame = 0


Query: 1   MAALFSLSSTSLTRTATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQ 60
           MAALFSLSS SLTRTATALPYPTTSFKGNV+ILNSKHLSISS +LK K+VDGKHLVVRNQ
Sbjct: 1   MAALFSLSSPSLTRTATALPYPTTSFKGNVNILNSKHLSISSLRLKSKSVDGKHLVVRNQ 60

Query: 61  AAASSLYASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSL ASPA+NVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPAENVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGDYGCFIEEYGCFIEGDSERSNFLFILIPKTSVPFIF 180
           VRKGFEGGQMPLYRRIPKLRGIAG                                    
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGG----------------------------------- 180

Query: 181 TYLARAREKSSHSIVAHPSPSFLKRMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK 240
                                    MHAGLPKYVPVNLKDIEEAGFQEGEEVSLE+LKEK
Sbjct: 181 -------------------------MHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEK 240

Query: 241 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 300
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP
Sbjct: 241 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 268

Query: 301 SVAKNLARAEEYFAKKKAAAAAAEQSSA 328
           SVAKNLARAEEYFAKKKAAAAAAEQ+SA
Sbjct: 301 SVAKNLARAEEYFAKKKAAAAAAEQASA 268

[Close]

BLAST of MELO3C012254.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CCS9 (50S ribosomal protein L15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001030 PE=3 SV=1)

HSP 1 Score: 450 bits (1158), Expect = 4.53e-156
Identity = 253/314 (80.57%), Postives = 253/314 (80.57%), Query Frame = 0


Query: 15  TATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQAAASSLYASPADNV 74
           TATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQAAASSLYASPADNV
Sbjct: 105 TATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQAAASSLYASPADNV 164

Query: 75  RFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYR 134
           RFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYR
Sbjct: 165 RFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYR 224

Query: 135 RIPKLRGIAGDYGCFIEEYGCFIEGDSERSNFLFILIPKTSVPFIFTYLARAREKSSHSI 194
           RIPKLRGIAG                                                  
Sbjct: 225 RIPKLRGIAGG------------------------------------------------- 284

Query: 195 VAHPSPSFLKRMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPL 254
                      MHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPL
Sbjct: 285 -----------MHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEKGLINPSGRERKLPL 344

Query: 255 KILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFA 314
           KILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFA
Sbjct: 345 KILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFA 358

Query: 315 KKKAAAAAAEQSSA 328
           KKKAAAAAAEQSSA
Sbjct: 405 KKKAAAAAAEQSSA 358

[Close]

BLAST of MELO3C012254.jh1 vs. ExPASy TrEMBL
Match: A0A6J1J6D0 (50S ribosomal protein L15, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482969 PE=3 SV=1)

HSP 1 Score: 417 bits (1073), Expect = 1.51e-144
Identity = 240/325 (73.85%), Postives = 249/325 (76.62%), Query Frame = 0


Query: 1   MAALFSLSSTSLTRTATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQ 60
           MAAL SLSS+SLTRTA ALP+PTTSFKGNV ILNSK  S SS KLKFK  DGK LVVR+Q
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTSFKGNVKILNSKQFSFSSLKLKFKVGDGKPLVVRSQ 60

Query: 61  AAASSLYASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSL ASP ++VRFRLDNLGPQ GSRK+GKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGDYGCFIEEYGCFIEGDSERSNFLFILIPKTSVPFIF 180
           VRKGFEGGQMPLYRRIPKLRGIAG                                    
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGG----------------------------------- 180

Query: 181 TYLARAREKSSHSIVAHPSPSFLKRMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK 240
                                    MHAGLPKYVPVNLKDIE AGFQEGEEVSLE+LKEK
Sbjct: 181 -------------------------MHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 240

Query: 241 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 300
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEA GCSLTVLPGRKKWVKP
Sbjct: 241 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 265

Query: 301 SVAKNLARAEEYFAKKKAAAAAAEQ 325
           SVAKNLARA+EYFAKK+AAAAAAEQ
Sbjct: 301 SVAKNLARADEYFAKKRAAAAAAEQ 265

[Close]

BLAST of MELO3C012254.jh1 vs. ExPASy TrEMBL
Match: A0A6J1H0G5 (50S ribosomal protein L15, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458464 PE=3 SV=1)

HSP 1 Score: 414 bits (1063), Expect = 5.02e-143
Identity = 238/325 (73.23%), Postives = 247/325 (76.00%), Query Frame = 0


Query: 1   MAALFSLSSTSLTRTATALPYPTTSFKGNVSILNSKHLSISSPKLKFKAVDGKHLVVRNQ 60
           MAAL SLSS+SLTRTA ALP+PTT FKGNV ILNSK  S S  KLKFK  DGK LVVR+Q
Sbjct: 1   MAALLSLSSSSLTRTAIALPHPTTPFKGNVKILNSKQFSFSPLKLKFKVGDGKPLVVRSQ 60

Query: 61  AAASSLYASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120
           AAASSL ASP ++VRFRLDNLGPQ GSRK+GKRKGRGISAGQGGSCGFGMRGQKSRSGPG
Sbjct: 61  AAASSLSASPVESVRFRLDNLGPQQGSRKKGKRKGRGISAGQGGSCGFGMRGQKSRSGPG 120

Query: 121 VRKGFEGGQMPLYRRIPKLRGIAGDYGCFIEEYGCFIEGDSERSNFLFILIPKTSVPFIF 180
           VRKGFEGGQMPLYRRIPKLRGIAG                                    
Sbjct: 121 VRKGFEGGQMPLYRRIPKLRGIAGG----------------------------------- 180

Query: 181 TYLARAREKSSHSIVAHPSPSFLKRMHAGLPKYVPVNLKDIEEAGFQEGEEVSLETLKEK 240
                                    MHAGLPKYVPVNLKDIE AGFQEGEEVSLE+LKEK
Sbjct: 181 -------------------------MHAGLPKYVPVNLKDIEAAGFQEGEEVSLESLKEK 240

Query: 241 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKP 300
           GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEA GCSLTVLPGRKKWVKP
Sbjct: 241 GLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAVGCSLTVLPGRKKWVKP 265

Query: 301 SVAKNLARAEEYFAKKKAAAAAAEQ 325
           SVAKNLARA+EYFAKK+AAAAAAEQ
Sbjct: 301 SVAKNLARADEYFAKKRAAAAAAEQ 265

[Close]

BLAST of MELO3C012254.jh1 vs. TAIR 10
Match: AT3G25920.1 (ribosomal protein L15 )

HSP 1 Score: 301.2 bits (770), Expect = 1.0e-81
Identity = 190/334 (56.89%), Postives = 213/334 (63.77%), Query Frame = 0


Query: 1   MAALFSLSSTSLT-RTATALPYPTTSFKGNVSILNSKHLSISSPKLK--FKAVDGKH--- 60
           MA   S+SS  LT R    L   +TSFKGNVS+L +    I S KL    K  + +    
Sbjct: 1   MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFAR 60

Query: 61  --LVVRNQAAASSLYASPADNVRFRLDNLGPQPGSRKRGKRKGRGISAGQGGSCGFGMRG 120
             +VV   AA SS   +P    RFRLDNLGPQPGSRK+ KRKGRGISAGQG SCGFGMRG
Sbjct: 61  PLVVVSQTAATSSAVVAPE---RFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRG 120

Query: 121 QKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGDYGCFIEEYGCFIEGDSERSNFLFILIP 180
           QKSRSGPG+ +GFEGGQ  LYRR+PKLRGIAG                            
Sbjct: 121 QKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGG--------------------------- 180

Query: 181 KTSVPFIFTYLARAREKSSHSIVAHPSPSFLKRMHAGLPKYVPVNLKDIEEAGFQEGEEV 240
                                            M +GLPKY+PVN+KDIE AGFQEG+EV
Sbjct: 181 ---------------------------------MRSGLPKYLPVNIKDIETAGFQEGDEV 240

Query: 241 SLETLKEKGLINPSGRERKLPLKILADGELSVKLNIKARAFSSAAKEKLEAAGCSLTVLP 300
           SLETLK+KGLINPSGRERKLPLKIL  GELS+KL  KARAFS+ AKEKLEA+GC+LTVLP
Sbjct: 241 SLETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLP 271

Query: 301 GRKKWVKPSVAKNLARAEEYFAKKKAAAAAAEQS 327
           GRKKWVKPSVAKN ARA+EYFAKK+AAAA A  S
Sbjct: 301 GRKKWVKPSVAKNQARADEYFAKKRAAAAEAATS 271

[Close]

BLAST of MELO3C012254.jh1 vs. TAIR 10
Match: AT5G64670.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 5.3e-06
Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 88  RKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGDYG 147
           RK   RKGRGI +G+G + G G +GQK+R    ++ GFEGGQ PL RR+PK RG    + 
Sbjct: 75  RKLKTRKGRGIGSGKGKTAGRGHKGQKARG--TMKFGFEGGQTPLRRRLPK-RGFKNKFK 134

Query: 148 CFIEEYG 155
              +  G
Sbjct: 135 LHFQPVG 138

The following BLAST results are available for this feature:

BLAST of MELO3C012254.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446604.1	3.20e-165	81.40	PREDICTED: 50S ribosomal protein L15, chloroplastic [Cucumis melo] >XP_008446605...	[more]
XP_004135093.1	3.76e-157	78.35	50S ribosomal protein L15, chloroplastic [Cucumis sativus] >KGN52087.1 hypotheti...	[more]
KAA0034559.1	9.36e-156	80.57	50S ribosomal protein L15 [Cucumis melo var. makuwa] >TYK09112.1 50S ribosomal p...	[more]
XP_038891383.1	6.81e-150	76.16	50S ribosomal protein L15, chloroplastic [Benincasa hispida]	[more]
XP_022984826.1	3.12e-144	73.85	50S ribosomal protein L15, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of MELO3C012254.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P22798	2.9e-81	55.39	50S ribosomal protein L15, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL15 P...	[more]
P25873	1.4e-80	56.89	50S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1...	[more]
P31165	9.2e-80	58.18	50S ribosomal protein L15, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=...	[more]
P31160	6.9e-27	40.00	50S ribosomal protein L15 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-80...	[more]
Q5N0U8	6.9e-27	40.00	50S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / S...	[more]

BLAST of MELO3C012254.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BFG1	1.55e-165	81.40	50S ribosomal protein L15, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489288...	[more]
A0A0A0KUI5	1.82e-157	78.35	Ribosomal_L18e/L15P domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_...	[more]
A0A5D3CCS9	4.53e-156	80.57	50S ribosomal protein L15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1J6D0	1.51e-144	73.85	50S ribosomal protein L15, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1H0G5	5.02e-143	73.23	50S ribosomal protein L15, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of MELO3C012254.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25920.1	1.0e-81	56.89	ribosomal protein L15	[more]
AT5G64670.1	5.3e-06	46.27	Ribosomal protein L18e/L15 superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.100.10.10		coord: 153..230 e-value: 3.4E-20 score: 73.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..126
None	No IPR available	PANTHER	PTHR12934:SF13	BNAA06G33230D PROTEIN	coord: 12..265
IPR005749	Ribosomal protein L15, bacterial-type	TIGRFAM	TIGR01071	TIGR01071	coord: 78..228 e-value: 3.0E-39 score: 132.1
IPR005749	Ribosomal protein L15, bacterial-type	PANTHER	PTHR12934	50S RIBOSOMAL PROTEIN L15	coord: 12..265
IPR021131	Ribosomal protein L18e/L15P	PFAM	PF00828	Ribosomal_L27A	coord: 102..229 e-value: 1.6E-31 score: 109.6
IPR001196	Ribosomal protein L15, conserved site	PROSITE	PS00475	RIBOSOMAL_L15	coord: 195..225
IPR030878	Ribosomal protein L15	HAMAP	MF_01341	Ribosomal_L15	coord: 78..231 score: 18.746017
IPR036227	Ribosomal L18e/L15P superfamily	SUPERFAMILY	52080	Ribosomal proteins L15p and L18e	coord: 79..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012254.jh1.t1	MELO3C012254.jh1.t1	mRNA
MELO3C012254.jh1.t2	MELO3C012254.jh1.t2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome