MELO3C012102 (gene) Melon (DHL92) v4

Overview
NameMELO3C012102
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Description50S ribosomal protein L18
Locationchr10: 2610639 .. 2613890 (+)
RNA-Seq ExpressionMELO3C012102
SyntenyMELO3C012102
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTATAATAATTTTTAAAGGAAAATATCATTAATTATTAAAGGAAAAATACAAATTAAATGAATTTCTGGAAAAGGAAGACGCGGGAGCAAAATCGCAATTGCGTCCACACACGAACGTGGAGGAGGAAACGTCTTTTCTCCTGCTATCACAAGGAGGCCAAGTCGCCGGCCGGGAGAATTTTAACGGCACCGCTTGATCTGGATTTTGAAGTACGGAATCAAATAGCCTCCGCACAACCAAACCACATTCAATCTGGCAGAAAATTGGCTAGGCCAATAGCTTGGTACCGCTTGCCGGTGCCTTTTCGTCTCTCTTAGCTATTATCTTATCTCCCATGTAATAAAAACTTCTAGGTTCAACTCTTGCGGGGTTTTTTCGTTCATACTTCCATTGGGTTTCTCTATTTATGATCTTTTTTTTCAATATGCTGATTGGGTTTCGCTTGACTTGCAAGGTGCTCGACGAAAGTTCTGAATGACGAAAACCCCGTCGTATAACGCGCATCGGGCATAGAAATCATTTCAATAATGTCCTCTTTACTTTTAAATACTTCAAATTTCAAAAAAGTTCATGGAGGAGTGGCTTTTCAAAATGTTTCTGGTTTGCTACTGAAGACTTCTATGCCCTTCGGTTTGCAGTCAAAGTCATTTGACTTTCGCAGCTTGAAAACTAAACGTAAGTGAAGCAGTACGTGCATTAGCTCATACGTCAAGCAGTTTCTTTTGGCTTATAATGAGTTATACATTCCGTGTAGATTGCGATGTGAAGCCGTTGATGATCCAAGCGAGAGGAAACTCTAAAACAGAAAGTGCAAAAGTTAGAAATAGGAGGTTGCAGAAAAAGGTGCGTTATCATCCTTCACTTTACTTCTCCTCAGTTTATTTTCTCTTGAAGGGGATGGTTTTTGTCGAGGGAGGAGATTAAGCAAGGTTAGAAATTTGATAACAGGGCAGCTTCAAGTTAGTGTTAGGAAAGAAATGACAAGATAAGGGCAGCGCAGGGTATTTAGAGACCAAGAACCAAAAATTCTTATAGCTTCAATTGCAGTACAGAGATGTTTGTTTCTTTTAAGTACAAGTTAGGGACTCAGTTGAACTAAACTCTTGTCGACTTATGATATTTATAAACTTAATACACGATAAAATGTCGTAAATAGGTAGAAGTTGACTCTATGAGTATTGTATTTGCTCAATTTTACAACTTTGAAAGTATAATGGTAAATTTGTACCTATTACCAAACTTTAGGGGTGGTTTTTACTATCTGTGTTAGATATTGACATATGAAACTATGCTAATGGATTTTATGCACAACTAATATTGGAGCTGTTTTTGTTTTGTTAATTGGTAGTCATCATAGTTATAACCAGTTTCTCATTACATTTGATGGTTTTCAACGGCAATCAGTATAATGGCACTCCTACAAGACCAAGGCTTTCAGTATTTTGTTCCGATAAACAGTTGTATGCAATGTTGGTTGACGATCAGAATAAGAAGTGTTTGTTTTATGGAAGCACCTTACAAAAATCCATGCGTCCAACTCTCTCATGCACCACCATCGTAAGTTTTTATTCTTAACATTTGACTTGAAATTAAGACCACAAAATCTAAGCTTCCTTTTTTTTCTTTTTTGTTGGGTGATTACAGGAAGCTGCTCAACATGTTGGTGAAGAACTTGTAAAAGTATGTGGGGACTTGAACATACACGAAATATCATCCTATGACCGAAATGGGTTTGCTCGCGGAGAGAAGATGCAAGCCTTTGAAATTGCAATTTCACGCTATGGGTTCTTACAACGATAGATATACGAAAAAAATAAGGCAAGTTCTAAATGTAAATGTGGAGAAAAGGTTGGTTAGGGCAATAGAAATCCGAGATAATCACTAGAAATGTATCATTGATCAAACTTAATTTAACACAAATCATTTTGAGCACAAAAAATGAGTTGTGATTAGGTATGATCTGGTAAAATTCGATTGATTATCTACTGTTACTATATTCTCACTGTACAGGCTACAACTCTCGCTCTCTGTCGCTTTGAAATATACAAAATTTCAAGCAACTCTTTAATTCATATACATCTCTACGGTAACACCTAATTACATAGCAATTTGTTAAAAGGGTGTAAGGTTTCTCATGTTACCTCTTTTAGGGGGTTAACGCTGGGGTGGTTGTTTAGTCTATATGAGTTCGCTATCATCAGAACGACTTAGATATCAGAACCACAGCATCTAACACCGTTTCCTTCTTGAAGTTTTTGCCATAAACAGAGCATCTCCCGAGGCCCCTGGTAGTGAGCAACTACATAATCATCCTTACATCCTTCAATATGAATCCTCTCATCCTTCTCGTAACGAATTTCAAGGCCCTCTTTCTTTATGTTTGCTATCCAGATTCCCATGGCTACATCTTCTAATTTAAACATCTGAGGATAGAATATAACATTCTGATTTTAGCATGTTATTTATGGAATAGTACCTTTCTTGAGCAAGGAAATAAATAACGGATACCTTTAAGCTGCCTTCTTTGTATTTTTTGGATATTGTTTTTGCTATGTCACTAGACACTACATAACCAGGACCATGTGCCCATGTTGGATAATTATCTTCGGGCCATTCCTGCAATGGAGCAATCAATGAAGGTAAGATGGTAGAAAGGACTTTTTATTAAATTAATCAAGCATGCGCTACACGGGTCAACGGAACCAAATTCTGGGCAAGCTTGTTAAAAAATGTGAACAATATTTGACATTGACGTACTCCTTTCTAACAGAAATATCGGTCAAATTCAATAAAATAGACAACCTCAATCATGGGGGAACAAATGTTTGAGTGTTAGGGTATCTTACAGGGTTGTTTTTTTTGTTATTGTAAATGAGAGATTTCAGTAAAGCAAAGTGAATATTTAGCCTTAGATTATCCACCCAATGTTAGATCCTTTGCCCGTATAAGTAAAAACCAACGAGGAAAATTACCTCCAAACTAATGTACCACTTGCTCTCAGGATCTCTGTGAGGTTGAGAATCTGAGTTGATGAGTCCATAAAGCAATCCACTTTGTGCATTGATCCTTTTTAAAGAAGCTAAAACTTCATCCACTCGAACAAAGGCATCATCATCTGTCTTCATGATATACTTTGCTGAAGCAATCTCCGCCTGCCGAAGTGGTGAGGTGAGACCAAATCATAATGCTAAATTCACATCAAGTGAAAGAGTGAATTTTTACCCCAAAGATGCAGATGCCCAACGTTTTCC

mRNA sequence

TTATAATAATTTTTAAAGGAAAATATCATTAATTATTAAAGGAAAAATACAAATTAAATGAATTTCTGGAAAAGGAAGACGCGGGAGCAAAATCGCAATTGCGTCCACACACGAACGTGGAGGAGGAAACGTCTTTTCTCCTGCTATCACAAGGAGGCCAAGTCGCCGGCCGGGAGAATTTTAACGGCACCGCTTGATCTGGATTTTGAAGTACGGAATCAAATAGCCTCCGCACAACCAAACCACATTCAATCTGGCAGAAAATTGGCTAGGCCAATAGCTTGGTACCGCTTGCCGACTTCTATGCCCTTCGGTTTGCAGTCAAAGTCATTTGACTTTCGCAGCTTGAAAACTAAACATTGCGATGTGAAGCCGTTGATGATCCAAGCGAGAGGAAACTCTAAAACAGAAAGTGCAAAAGTTAGAAATAGGAGGTTGCAGAAAAAGTTGTATGCAATGTTGGTTGACGATCAGAATAAGAAGTGTTTGTTTTATGGAAGCACCTTACAAAAATCCATGCGTCCAACTCTCTCATGCACCACCATCGAAGCTGCTCAACATGTTGGTGAAGAACTTGTAAAAGTATGTGGGGACTTGAACATACACGAAATATCATCCTATGACCGAAATGGGTTTGCTCGCGGAGAGAAGATGCAAGCCTTTGAAATTGCAATTTCACGCTATGGGTTCTTACAACGATAGATATACGAAAAAAATAAGGCAAGTTCTAAATGTAAATGTGGAGAAAAGGTTGGTTAGGGCAATAGAAATCCGAGATAATCACTAGAAATGTATCATTGATCAAACTTAATTTAACACAAATCATTTTGAGCACAAAAAATGAGTTGTGATTAGGTATGATCTGGTAAAATTCGATTGATTATCTACTGTTACTATATTCTCACTGTACAGGCTACAACTCTCGCTCTCTGTCGCTTTGAAATATACAAAATTTCAAGCAACTCTTTAATTCATATACATCTCTACGGTAACACCTAATTACATAGCAATTTGTTAAAAGGGTGTAAGGTTTCTCATGTTACCTCTTTTAGGGGGTTAACGCTGGGGTGGTTGTTTAGTCTATATGAGTTCGCTATCATCAGAACGACTTAGATATCAGAACCACAGCATCTAACACCGTTTCCTTCTTGAAGTTTTTGCCATAAACAGAGCATCTCCCGAGGCCCCTGGTAGTGAGCAACTACATAATCATCCTTACATCCTTCAATATGAATCCTCTCATCCTTCTCGTAACGAATTTCAAGGCCCTCTTTCTTTATGTTTGCTATCCAGATTCCCATGGCTACATCTTCTAATTTAAACATCTGAGGATAGAATATAACATTCTGATTTTAGCATGTTATTTATGGAATAGTACCTTTCTTGAGCAAGGAAATAAATAACGGATACCTTTAAGCTGCCTTCTTTGTATTTTTTGGATATTGTTTTTGCTATGTCACTAGACACTACATAACCAGGACCATGTGCCCATGTTGGATAATTATCTTCGGGCCATTCCTGCAATGGAGCAATCAATGAAGGTAAGATGGTAGAAAGGACTTTTTATTAAATTAATCAAGCATGCGCTACACGGGTCAACGGAACCAAATTCTGGGCAAGCTTGTTAAAAAATGTGAACAATATTTGACATTGACGTACTCCTTTCTAACAGAAATATCGGTCAAATTCAATAAAATAGACAACCTCAATCATGGGGGAACAAATGTTTGAGTGTTAGGGTATCTTACAGGGTTGTTTTTTTTGTTATTGTAAATGAGAGATTTCAGTAAAGCAAAGTGAATATTTAGCCTTAGATTATCCACCCAATGTTAGATCCTTTGCCCGTATAAGTAAAAACCAACGAGGAAAATTACCTCCAAACTAATGTACCACTTGCTCTCAGGATCTCTGTGAGGTTGAGAATCTGAGTTGATGAGTCCATAAAGCAATCCACTTTGTGCATTGATCCTTTTTAAAGAAGCTAAAACTTCATCCACTCGAACAAAGGCATCATCATCTGTCTTCATGATATACTTTGCTGAAGCAATCTCCGCCTGCCGAAGTGGTGAGGTGAGACCAAATCATAATGCTAAATTCACATCAAGTGAAAGAGTGAATTTTTACCCCAAAGATGCAGATGCCCAACGTTTTCC

Coding sequence (CDS)

ATGAATTTCTGGAAAAGGAAGACGCGGGAGCAAAATCGCAATTGCGTCCACACACGAACGTGGAGGAGGAAACGTCTTTTCTCCTGCTATCACAAGGAGGCCAAGTCGCCGGCCGGGAGAATTTTAACGGCACCGCTTGATCTGGATTTTGAAGTACGGAATCAAATAGCCTCCGCACAACCAAACCACATTCAATCTGGCAGAAAATTGGCTAGGCCAATAGCTTGGTACCGCTTGCCGACTTCTATGCCCTTCGGTTTGCAGTCAAAGTCATTTGACTTTCGCAGCTTGAAAACTAAACATTGCGATGTGAAGCCGTTGATGATCCAAGCGAGAGGAAACTCTAAAACAGAAAGTGCAAAAGTTAGAAATAGGAGGTTGCAGAAAAAGTTGTATGCAATGTTGGTTGACGATCAGAATAAGAAGTGTTTGTTTTATGGAAGCACCTTACAAAAATCCATGCGTCCAACTCTCTCATGCACCACCATCGAAGCTGCTCAACATGTTGGTGAAGAACTTGTAAAAGTATGTGGGGACTTGAACATACACGAAATATCATCCTATGACCGAAATGGGTTTGCTCGCGGAGAGAAGATGCAAGCCTTTGAAATTGCAATTTCACGCTATGGGTTCTTACAACGATAG

Protein sequence

MNFWKRKTREQNRNCVHTRTWRRKRLFSCYHKEAKSPAGRILTAPLDLDFEVRNQIASAQPNHIQSGRKLARPIAWYRLPTSMPFGLQSKSFDFRSLKTKHCDVKPLMIQARGNSKTESAKVRNRRLQKKLYAMLVDDQNKKCLFYGSTLQKSMRPTLSCTTIEAAQHVGEELVKVCGDLNIHEISSYDRNGFARGEKMQAFEIAISRYGFLQR
Homology
[Close]
BLAST of MELO3C012102 vs. NCBI nr
Match: KAA0034424.1 (50S ribosomal protein L18 [Cucumis melo var. makuwa])

HSP 1 Score: 402.9 bits (1034), Expect = 1.7e-108
Identity = 206/232 (88.79%), Postives = 206/232 (88.79%), Query Frame = 0 

Query: 1   MNFWKRKTREQNRNCVHTRTWRRKRLFSCYHKEAKSPAGRILTAPLDLDFEVRNQIASAQ 60
           MNFWKRKTREQNRNCVHTRTWRRKRLFSCYHKEAKSPAGRILTAPLDLDFEVRNQIASAQ
Sbjct: 1   MNFWKRKTREQNRNCVHTRTWRRKRLFSCYHKEAKSPAGRILTAPLDLDFEVRNQIASAQ 60

Query: 61  PNHIQSGRKLARPIAWYRLPTSMPFGLQSKSFDFRSLKTKHCDVKPLMIQARGNSKTESA 120
           PNHIQSGRKLARPIAWYRLP        SKSFDFRSLKTKHCDVKPLMIQARGNSKTESA
Sbjct: 61  PNHIQSGRKLARPIAWYRLP--------SKSFDFRSLKTKHCDVKPLMIQARGNSKTESA 120

Query: 121 KVRNRRLQKK------------------LYAMLVDDQNKKCLFYGSTLQKSMRPTLSCTT 180
           KVRNRRLQKK                  LYAMLVDDQNKKCLFYGSTLQKSMRPTLSCTT
Sbjct: 121 KVRNRRLQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPTLSCTT 180

Query: 181 IEAAQHVGEELVKVCGDLNIHEISSYDRNGFARGEKMQAFEIAISRYGFLQR 215
           IEAAQHVGEELVKVCGDLNIHEISSYDRNGFARGEKMQAFEIAISRYGFLQR
Sbjct: 181 IEAAQHVGEELVKVCGDLNIHEISSYDRNGFARGEKMQAFEIAISRYGFLQR 224

[Close]
BLAST of MELO3C012102 vs. NCBI nr
Match: XP_008446359.1 (PREDICTED: 50S ribosomal protein L18 [Cucumis melo] >XP_008446360.1 PREDICTED: 50S ribosomal protein L18 [Cucumis melo] >XP_008446361.1 PREDICTED: 50S ribosomal protein L18 [Cucumis melo] >TYK17710.1 50S ribosomal protein L18 [Cucumis melo var. makuwa])

HSP 1 Score: 260.8 bits (665), Expect = 1.1e-65
Identity = 135/154 (87.66%), Postives = 135/154 (87.66%), Query Frame = 0 

Query: 79  LPTSMPFGLQSKSFDFRSLKTKHCDVKPLMIQARGNSKTESAKVRNRRLQKK-------- 138
           L TSMPFGLQSKSFDFRSLKTKHCDVKPLMIQARGNSKTESAKVRNRRLQKK        
Sbjct: 28  LKTSMPFGLQSKSFDFRSLKTKHCDVKPLMIQARGNSKTESAKVRNRRLQKKYNGTPTRP 87

Query: 139 ----------LYAMLVDDQNKKCLFYGSTLQKSMRPTLSCTTIEAAQHVGEELVKVCGDL 198
                     LYAMLVDDQNKKCLFYGSTLQKSMRPTLSCTTIEAAQHVGEELVKVCGDL
Sbjct: 88  RLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPTLSCTTIEAAQHVGEELVKVCGDL 147

Query: 199 NIHEISSYDRNGFARGEKMQAFEIAISRYGFLQR 215
           NIHEISSYDRNGFARGEKMQAFEIAISRYGFLQR
Sbjct: 148 NIHEISSYDRNGFARGEKMQAFEIAISRYGFLQR 181

[Close]
BLAST of MELO3C012102 vs. NCBI nr
Match: XP_004135173.1 (uncharacterized protein LOC101218434 [Cucumis sativus] >KGN51925.1 hypothetical protein Csa_008392 [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 3.0e-60
Identity = 127/153 (83.01%), Postives = 128/153 (83.66%), Query Frame = 0 

Query: 79  LPTSMPFGLQSKSFDFRSLKTKHCDVKPLMIQARGNSKTESAKVRNRRLQKK-------- 138
           L TSMPFGLQSK FDFRSLKTKHCDVKPL IQARGNSKTESAKVRNRR+QKK        
Sbjct: 28  LKTSMPFGLQSKPFDFRSLKTKHCDVKPLTIQARGNSKTESAKVRNRRMQKKYNGTPTRP 87

Query: 139 ----------LYAMLVDDQNKKCLFYGSTLQKSMRPTLSCTTIEAAQHVGEELVKVCGDL 198
                     LYAMLVDDQNKKCLFYGSTLQKSMRPT SCTTIEAAQHVGEELVKVC DL
Sbjct: 88  RLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPTPSCTTIEAAQHVGEELVKVCMDL 147

Query: 199 NIHEISSYDRNGFARGEKMQAFEIAISRYGFLQ 214
           NIHEIS YDRNGFA GEKMQAFEIAISRYGFLQ
Sbjct: 148 NIHEISLYDRNGFACGEKMQAFEIAISRYGFLQ 180

[Close]
BLAST of MELO3C012102 vs. NCBI nr
Match: XP_022987454.1 (uncharacterized protein LOC111484997 [Cucurbita maxima])

HSP 1 Score: 233.8 bits (595), Expect = 1.4e-57
Identity = 122/152 (80.26%), Postives = 125/152 (82.24%), Query Frame = 0 

Query: 81  TSMPFGLQSKSFDFRSLKTKHCDVKPLMIQARGNSKTESAKVRNRRLQKK---------- 140
           TS PF  QSK F+F SLK +HCDVKPLMIQARGNSKTESAKVRNRRLQKK          
Sbjct: 30  TSTPFWFQSKPFNFPSLKRRHCDVKPLMIQARGNSKTESAKVRNRRLQKKYNGSSTKPRL 89

Query: 141 --------LYAMLVDDQNKKCLFYGSTLQKSMRPTLSCTTIEAAQHVGEELVKVCGDLNI 200
                   LYAMLVDDQNKKCLFYGSTLQKSMRP+ SCTTIEAAQHVGEELVK C DLNI
Sbjct: 90  SVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPSPSCTTIEAAQHVGEELVKACEDLNI 149

Query: 201 HEISSYDRNGFARGEKMQAFEIAISRYGFLQR 215
           HEISSYDRNGFARGEKMQAFEIAISRYGFLQR
Sbjct: 150 HEISSYDRNGFARGEKMQAFEIAISRYGFLQR 181

[Close]
BLAST of MELO3C012102 vs. NCBI nr
Match: XP_038891854.1 (50S ribosomal protein L18 isoform X1 [Benincasa hispida] >XP_038891855.1 50S ribosomal protein L18 isoform X1 [Benincasa hispida])

HSP 1 Score: 230.7 bits (587), Expect = 1.2e-56
Identity = 120/152 (78.95%), Postives = 125/152 (82.24%), Query Frame = 0 

Query: 81  TSMPFGLQSKSFDFRSLKTKHCDVKPLMIQARGNSKTESAKVRNRRLQKK---------- 140
           TS PFGLQSK F+F SLKT++CDVKPL IQARGNSKTESAK+ NRRLQKK          
Sbjct: 76  TSTPFGLQSKPFNFPSLKTRNCDVKPLTIQARGNSKTESAKITNRRLQKKYNGTPTRPRL 135

Query: 141 --------LYAMLVDDQNKKCLFYGSTLQKSMRPTLSCTTIEAAQHVGEELVKVCGDLNI 200
                   LYAMLVDDQNKKCLFYGSTLQKSMRP+ SCTTIEAAQHVGEELVK C DLNI
Sbjct: 136 SVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPSPSCTTIEAAQHVGEELVKACEDLNI 195

Query: 201 HEISSYDRNGFARGEKMQAFEIAISRYGFLQR 215
           HEISSYDRNGFARGEKMQAFEIAISRYG LQR
Sbjct: 196 HEISSYDRNGFARGEKMQAFEIAISRYGLLQR 227

[Close]
BLAST of MELO3C012102 vs. ExPASy TrEMBL
Match: A0A5A7ST92 (50S ribosomal protein L18 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G004300 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 8.3e-109
Identity = 206/232 (88.79%), Postives = 206/232 (88.79%), Query Frame = 0 

Query: 1   MNFWKRKTREQNRNCVHTRTWRRKRLFSCYHKEAKSPAGRILTAPLDLDFEVRNQIASAQ 60
           MNFWKRKTREQNRNCVHTRTWRRKRLFSCYHKEAKSPAGRILTAPLDLDFEVRNQIASAQ
Sbjct: 1   MNFWKRKTREQNRNCVHTRTWRRKRLFSCYHKEAKSPAGRILTAPLDLDFEVRNQIASAQ 60

Query: 61  PNHIQSGRKLARPIAWYRLPTSMPFGLQSKSFDFRSLKTKHCDVKPLMIQARGNSKTESA 120
           PNHIQSGRKLARPIAWYRLP        SKSFDFRSLKTKHCDVKPLMIQARGNSKTESA
Sbjct: 61  PNHIQSGRKLARPIAWYRLP--------SKSFDFRSLKTKHCDVKPLMIQARGNSKTESA 120

Query: 121 KVRNRRLQKK------------------LYAMLVDDQNKKCLFYGSTLQKSMRPTLSCTT 180
           KVRNRRLQKK                  LYAMLVDDQNKKCLFYGSTLQKSMRPTLSCTT
Sbjct: 121 KVRNRRLQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPTLSCTT 180

Query: 181 IEAAQHVGEELVKVCGDLNIHEISSYDRNGFARGEKMQAFEIAISRYGFLQR 215
           IEAAQHVGEELVKVCGDLNIHEISSYDRNGFARGEKMQAFEIAISRYGFLQR
Sbjct: 181 IEAAQHVGEELVKVCGDLNIHEISSYDRNGFARGEKMQAFEIAISRYGFLQR 224

[Close]
BLAST of MELO3C012102 vs. ExPASy TrEMBL
Match: A0A1S3BEE0 (50S ribosomal protein L18 OS=Cucumis melo OX=3656 GN=LOC103489126 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 5.1e-66
Identity = 135/154 (87.66%), Postives = 135/154 (87.66%), Query Frame = 0 

Query: 79  LPTSMPFGLQSKSFDFRSLKTKHCDVKPLMIQARGNSKTESAKVRNRRLQKK-------- 138
           L TSMPFGLQSKSFDFRSLKTKHCDVKPLMIQARGNSKTESAKVRNRRLQKK        
Sbjct: 28  LKTSMPFGLQSKSFDFRSLKTKHCDVKPLMIQARGNSKTESAKVRNRRLQKKYNGTPTRP 87

Query: 139 ----------LYAMLVDDQNKKCLFYGSTLQKSMRPTLSCTTIEAAQHVGEELVKVCGDL 198
                     LYAMLVDDQNKKCLFYGSTLQKSMRPTLSCTTIEAAQHVGEELVKVCGDL
Sbjct: 88  RLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPTLSCTTIEAAQHVGEELVKVCGDL 147

Query: 199 NIHEISSYDRNGFARGEKMQAFEIAISRYGFLQR 215
           NIHEISSYDRNGFARGEKMQAFEIAISRYGFLQR
Sbjct: 148 NIHEISSYDRNGFARGEKMQAFEIAISRYGFLQR 181

[Close]
BLAST of MELO3C012102 vs. ExPASy TrEMBL
Match: A0A5D3D244 (50S ribosomal protein L18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00380 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 5.1e-66
Identity = 135/154 (87.66%), Postives = 135/154 (87.66%), Query Frame = 0 

Query: 79  LPTSMPFGLQSKSFDFRSLKTKHCDVKPLMIQARGNSKTESAKVRNRRLQKK-------- 138
           L TSMPFGLQSKSFDFRSLKTKHCDVKPLMIQARGNSKTESAKVRNRRLQKK        
Sbjct: 28  LKTSMPFGLQSKSFDFRSLKTKHCDVKPLMIQARGNSKTESAKVRNRRLQKKYNGTPTRP 87

Query: 139 ----------LYAMLVDDQNKKCLFYGSTLQKSMRPTLSCTTIEAAQHVGEELVKVCGDL 198
                     LYAMLVDDQNKKCLFYGSTLQKSMRPTLSCTTIEAAQHVGEELVKVCGDL
Sbjct: 88  RLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPTLSCTTIEAAQHVGEELVKVCGDL 147

Query: 199 NIHEISSYDRNGFARGEKMQAFEIAISRYGFLQR 215
           NIHEISSYDRNGFARGEKMQAFEIAISRYGFLQR
Sbjct: 148 NIHEISSYDRNGFARGEKMQAFEIAISRYGFLQR 181

[Close]
BLAST of MELO3C012102 vs. ExPASy TrEMBL
Match: A0A0A0KQM5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605190 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.4e-60
Identity = 127/153 (83.01%), Postives = 128/153 (83.66%), Query Frame = 0 

Query: 79  LPTSMPFGLQSKSFDFRSLKTKHCDVKPLMIQARGNSKTESAKVRNRRLQKK-------- 138
           L TSMPFGLQSK FDFRSLKTKHCDVKPL IQARGNSKTESAKVRNRR+QKK        
Sbjct: 28  LKTSMPFGLQSKPFDFRSLKTKHCDVKPLTIQARGNSKTESAKVRNRRMQKKYNGTPTRP 87

Query: 139 ----------LYAMLVDDQNKKCLFYGSTLQKSMRPTLSCTTIEAAQHVGEELVKVCGDL 198
                     LYAMLVDDQNKKCLFYGSTLQKSMRPT SCTTIEAAQHVGEELVKVC DL
Sbjct: 88  RLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPTPSCTTIEAAQHVGEELVKVCMDL 147

Query: 199 NIHEISSYDRNGFARGEKMQAFEIAISRYGFLQ 214
           NIHEIS YDRNGFA GEKMQAFEIAISRYGFLQ
Sbjct: 148 NIHEISLYDRNGFACGEKMQAFEIAISRYGFLQ 180

[Close]
BLAST of MELO3C012102 vs. ExPASy TrEMBL
Match: A0A6J1JIY0 (uncharacterized protein LOC111484997 OS=Cucurbita maxima OX=3661 GN=LOC111484997 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 6.7e-58
Identity = 122/152 (80.26%), Postives = 125/152 (82.24%), Query Frame = 0 

Query: 81  TSMPFGLQSKSFDFRSLKTKHCDVKPLMIQARGNSKTESAKVRNRRLQKK---------- 140
           TS PF  QSK F+F SLK +HCDVKPLMIQARGNSKTESAKVRNRRLQKK          
Sbjct: 30  TSTPFWFQSKPFNFPSLKRRHCDVKPLMIQARGNSKTESAKVRNRRLQKKYNGSSTKPRL 89

Query: 141 --------LYAMLVDDQNKKCLFYGSTLQKSMRPTLSCTTIEAAQHVGEELVKVCGDLNI 200
                   LYAMLVDDQNKKCLFYGSTLQKSMRP+ SCTTIEAAQHVGEELVK C DLNI
Sbjct: 90  SVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPSPSCTTIEAAQHVGEELVKACEDLNI 149

Query: 201 HEISSYDRNGFARGEKMQAFEIAISRYGFLQR 215
           HEISSYDRNGFARGEKMQAFEIAISRYGFLQR
Sbjct: 150 HEISSYDRNGFARGEKMQAFEIAISRYGFLQR 181

[Close]
BLAST of MELO3C012102 vs. TAIR 10
Match: AT1G14205.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 142.5 bits (358), Expect = 3.9e-34
Identity = 77/127 (60.63%), Postives = 90/127 (70.87%), Query Frame = 0 

Query: 104 VKPLMIQARGNSKTESAKVRNRRLQKK------------------LYAMLVDDQNKKCLF 163
           VKP +I+ARGN++ ES K RNRR +KK                  LYAMLVDD NKKCLF
Sbjct: 38  VKPFVIEARGNTRVESPKTRNRRSRKKFTGTQTKPRLSVFCSDKQLYAMLVDDFNKKCLF 97

Query: 164 YGSTLQKSMRPTLSCTTIEAAQHVGEELVKVCGDLNIHEISSYDRNGFARGEKMQAFEIA 213
           Y STLQKS+R    CT IEAA+ VGEEL+K   DL I+EISSYDRNG  RGE+MQAFEIA
Sbjct: 98  YASTLQKSIRGDPPCTVIEAAKRVGEELIKASIDLKINEISSYDRNGNKRGERMQAFEIA 157

The following BLAST results are available for this feature:
BLAST of MELO3C012102 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0034424.11.7e-10888.7950S ribosomal protein L18 [Cucumis melo var. makuwa][more]
XP_008446359.11.1e-6587.66PREDICTED: 50S ribosomal protein L18 [Cucumis melo] >XP_008446360.1 PREDICTED: 5... [more]
XP_004135173.13.0e-6083.01uncharacterized protein LOC101218434 [Cucumis sativus] >KGN51925.1 hypothetical ... [more]
XP_022987454.11.4e-5780.26uncharacterized protein LOC111484997 [Cucurbita maxima][more]
XP_038891854.11.2e-5678.9550S ribosomal protein L18 isoform X1 [Benincasa hispida] >XP_038891855.1 50S rib... [more]
BLAST of MELO3C012102 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C012102 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7ST928.3e-10988.7950S ribosomal protein L18 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo... [more]
A0A1S3BEE05.1e-6687.6650S ribosomal protein L18 OS=Cucumis melo OX=3656 GN=LOC103489126 PE=4 SV=1[more]
A0A5D3D2445.1e-6687.6650S ribosomal protein L18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A0A0KQM51.4e-6083.01Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605190 PE=4 SV=1[more]
A0A6J1JIY06.7e-5880.26uncharacterized protein LOC111484997 OS=Cucurbita maxima OX=3661 GN=LOC111484997... [more]
BLAST of MELO3C012102 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G14205.13.9e-3460.63Ribosomal L18p/L5e family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005484Ribosomal protein L18PFAMPF00861Ribosomal_L18pcoord: 117..202
e-value: 3.0E-7
score: 30.8
IPR005484Ribosomal protein L18PANTHERPTHR1289939S RIBOSOMAL PROTEIN L18, MITOCHONDRIALcoord: 79..130
IPR005484Ribosomal protein L18PANTHERPTHR1289939S RIBOSOMAL PROTEIN L18, MITOCHONDRIALcoord: 128..214
NoneNo IPR availableGENE3D3.30.420.100coord: 98..211
e-value: 4.4E-11
score: 45.2
NoneNo IPR availablePANTHERPTHR12899:SF8RIBOSOMAL L18P/L5E FAMILY PROTEINcoord: 79..130
NoneNo IPR availablePANTHERPTHR12899:SF8RIBOSOMAL L18P/L5E FAMILY PROTEINcoord: 128..214
NoneNo IPR availableCDDcd00432Ribosomal_L18_L5ecoord: 125..211
e-value: 3.14223E-11
score: 56.0091
NoneNo IPR availableSUPERFAMILY53137Translational machinery componentscoord: 117..207

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C012102.1MELO3C012102.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome