MELO3C012088.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDSstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTCATCGTTGGAAAGGGAATAATTATTATTATTTAATTTTTTTCTTAAAAAAAAAACGACGTAGTTTGATTCTTCTCGATCTCCATCCTCTCTCTTCCATGATTCGTACCACTCCCACAGATTTTTCTTTGTTTTTTCTGTAAACCCTAACTCGAATCCTTTTTTCATTTTCCTCTTCTTTCGTTGATTTTGATTTCTTGGTGTTAGTTTGTTTCGTTTCTTTTCCTTCTTGTAGAAAGGCTAGTGTAGGAAGGTGATCCCTTGTTCTCCTTTCCCATCATAGGAATTGGATTTGGGATTCCCTTCCTGCTCTTTCTTAACCTGCCGGAAAACTGTACGTGAGCTGAGATTTGGGTTTTTGGTTCCTAATGCAATTCCGGCTGCTTTTGGGGTTTAGTATTTGATCTTTTCTAGTTCCTTTTCCAAGATGGGTATTGTAATCTCTGATCAAATTTTGGGTACTTTTGTACCAATTGTGGTTTATTGGCTATATTCTGGGCTTTATATTCTTCTTGGCTCATTTGAGAACTACCGATTACACTCTAAGAAAGATGAGCTGGAGAAGAACTTAGTGTCTAAAAGCACTGTGGTTAGAGGCGTTTTCCTTCAACAGATTATTCAGGCAATCGTTGCAATCCTCTTGTTTAAGGTATGTATTGAATAATATCCATTGAAGTTCATTAATTTCTATGTGTATGTGCTTTTCATCATACTTTGTGACTTTGTCAACCTTTGTATAAAGTCGGGATCAAATATCAATAGGATATTAATAGTTGAAAGAGGTGGCATTGAGTTATATGGAAAGTGTAAGAATCACTTGATGCAAATTTTATCTCTGCCCGGTCCCCCACTTGCTTGTAGTTCTCATGGGTTTGTGGACACTAGATATAGCATTAAGTCTGGACTATGTTGAGAAGTAATTGTACTAGTGATTACTGATTAGTACTGCGAAATTTATTACTGGTTGACTTGGTTGGTTCTTGTTAAATTTTATGTGCTATATTACCAGCATCAGTTGTGGAGTGTTGGACCTGTTTACTTCTTAGTCTTGCAAACCAAGATTGATCAATATATTTTTTTTCTGAAAATTCATTTTGTTAGCGCTGAATCACTTATTTCACCTGGTTAGGTCACTTTCCATGAAAATTTTTCATCCGTGGTTCTTTAACTACTCTGCCTCAAAATTTTCGTCTCCCCTGCAAAACAAGGAGTTAATGAAAGAGAGAAAAAGTAGTATCCCAAAATGTCACTGTATTTTAGTTTTGATTAGTTAGTCTTGTGTATAAGACTATTGAAAGAACATGTCTTTCCGCTGGTTTCTTAGGAAACTTTTGTGTACTTTTTCTTTGGTGTGTGCATCTCAAATGAAAATTAATCCTTGAGCTGTCTCAGGATGGATCCCACCAGATTTACACTACTTCAACTAGTGGTGAATGGTGCTTAAGTCTCGGTTTCTTTCCCCCAATGTCTTGGGATTTAGGTGGTTAAGGAAAATGAAGGGACACTGTTAATCTAGGTTGATAGGCTGTGCACCTTTATTTTATTTCCGGTCTACATCTGAGATTACTCGTCTGTGCTTCAATTGTAACCTTCCAGATTGATAGCATCTTTTTATGGGTTCTGCTGTCCTTAATATGAGTTTCAATAGTGAAGCATATTGGGCCACATTTCTTAAATACACGTCTCTGCAGTCTTTTTCAGCGTCTGATTTCTTTCACATATATTTGTTTACTCACCATTCGAGTACTGGCTGTAAATGTCATGTAGCCATTATTCAATATGATTAAGAAACAAAAATTTGTTTGTTGTGTTGAAGTCAGTTTTTGCGAGGTGGAAAACCTACACATTCCTGAAAATGAAGGGATTAAAGAAATTATTTTCAAGGGGCCAAAATTGCAATGTTATATTGGTTAAACATTATTCTGTAGATCCTGCAATTAATTTCTGATATGCAGGATCTAATTATTTCTCTTTTCATGCTGAACATTACTTGTTTCATTTGTTTATCAGTTGCATCTAATGCAATGGAGGTGTAATAAATTCACTAAAATTTAGCAAGTCTAACGTGGCTAATGATTTTGCGTCTCTTATTTGTCACGTTATATTTTCTATGACTGAGTGGATTTGACATGGGAAGGTTGATTTGATCATTGCCCGTCTGCTGACAACTGCTTTTGTTCTTAATATGTAGGTAACTGAAACTGATGGGGAGGTTGCTACAGGTCCAAAATCTTGGCTAACAATCGCAGTTCAGTTTATTGTGGCGATGCTCGTGTTGGACACTTGGCAATATTTCATTCATAGATACATGCATCAGAACAAGTTTCTATACAAGCACGTCCATTCCCAGCATCACCGTTTGGTTGTACCTTATGCATTTGGAGCTTTATACAATCATCCGTTGGAGGGTCTTCTCCTTGACACAATCGGCGGGGCTTTATCTTTTCTTGTTTCTGGGATGTCGCCTCGAGTTGCCATCTTTTTCTTTTCCTTTGCCACCATCAAGACAGTGGATGACCATTGTGGATTATGGCTTCCTGGGAACCTTTTCCACGTGTTCTTCAGAAACAATTCTGCATATCATGATGTCCACCACCAGCTATATGGCAGTAAGTATAACTTCTCACAGCCATTTTTTGTTACGTGGGATAGAATATTTGGCACCTACATGCCTTACTCATTAGAGAAGAGAGCAGGGGGTGGTTTCGAAGCGCGAGTTAAGGAAGATTAGTTCAAATAGCAATCATATATTATTTGCTCCCGTGTTAATTTTTTCTCTCCCTATTAGCCAACCACCATACTGCTAAATTTGTATCATACGCCTATTCTTGTGTCTTACACTTTTGTTACTATTATTTCCTCGAAGTTTCATAGCTGAATCATGTTGTGATTTGAACCCTTTTTTTTTGTACCTAATCCTTTTGAACAGAGAACACCCTTGATTTTTTTCCTCTTTCAAATTGGGGTAACCGGTACTTAATGACATTGTGAAGTATATCTTTCTTGTGCTAAATTAGATTGATCCAATCTGGTAAAGGCCAAACATTGTTAT ATTTTCATCGTTGGAAAGGGAATAATTATTATTATTTAATTTTTTTCTTAAAAAAAAAACGACGTAGTTTGATTCTTCTCGATCTCCATCCTCTCTCTTCCATGATTCGTACCACTCCCACAGATTTTTCTTTGTTTTTTCTGTAAACCCTAACTCGAATCCTTTTTTCATTTTCCTCTTCTTTCGTTGATTTTGATTTCTTGGTGTTAGTTTGTTTCGTTTCTTTTCCTTCTTGTAGAAAGGCTAGTGTAGGAAGGTGATCCCTTGTTCTCCTTTCCCATCATAGGAATTGGATTTGGGATTCCCTTCCTGCTCTTTCTTAACCTGCCGGAAAACTGTACGTGAGCTGAGATTTGGGTTTTTGGTTCCTAATGCAATTCCGGCTGCTTTTGGGGTTTAGTATTTGATCTTTTCTAGTTCCTTTTCCAAGATGGGTATTGTAATCTCTGATCAAATTTTGGGTACTTTTGTACCAATTGTGGTTTATTGGCTATATTCTGGGCTTTATATTCTTCTTGGCTCATTTGAGAACTACCGATTACACTCTAAGAAAGATGAGCTGGAGAAGAACTTAGTGTCTAAAAGCACTGTGGTTAGAGGCGTTTTCCTTCAACAGATTATTCAGGCAATCGTTGCAATCCTCTTGTTTAAGGTAACTGAAACTGATGGGGAGGTTGCTACAGGTCCAAAATCTTGGCTAACAATCGCAGTTCAGTTTATTGTGGCGATGCTCGTGTTGGACACTTGGCAATATTTCATTCATAGATACATGCATCAGAACAAGTTTCTATACAAGCACGTCCATTCCCAGCATCACCGTTTGGTTGTACCTTATGCATTTGGAGCTTTATACAATCATCCGTTGGAGGGTCTTCTCCTTGACACAATCGGCGGGGCTTTATCTTTTCTTGTTTCTGGGATGTCGCCTCGAGTTGCCATCTTTTTCTTTTCCTTTGCCACCATCAAGACAGTGGATGACCATTGTGGATTATGGCTTCCTGGGAACCTTTTCCACGTGTTCTTCAGAAACAATTCTGCATATCATGATGTCCACCACCAGCTATATGGCAGTAAGTATAACTTCTCACAGCCATTTTTTGTTACGTGGGATAGAATATTTGGCACCTACATGCCTTACTCATTAGAGAAGAGAGCAGGGGGTGGTTTCGAAGCGCGAGTTAAGGAAGATTAGTTCAAATAGCAATCATATATTATTTGCTCCCGTGTTAATTTTTTCTCTCCCTATTAGCCAACCACCATACTGCTAAATTTGTATCATACGCCTATTCTTGTGTCTTACACTTTTGTTACTATTATTTCCTCGAAGTTTCATAGCTGAATCATGTTGTGATTTGAACCCTTTTTTTTTGTACCTAATCCTTTTGAACAGAGAACACCCTTGATTTTTTTCCTCTTTCAAATTGGGGTAACCGGTACTTAATGACATTGTGAAGTATATCTTTCTTGTGCTAAATTAGATTGATCCAATCTGGTAAAGGCCAAACATTGTTAT ATGGGTATTGTAATCTCTGATCAAATTTTGGGTACTTTTGTACCAATTGTGGTTTATTGGCTATATTCTGGGCTTTATATTCTTCTTGGCTCATTTGAGAACTACCGATTACACTCTAAGAAAGATGAGCTGGAGAAGAACTTAGTGTCTAAAAGCACTGTGGTTAGAGGCGTTTTCCTTCAACAGATTATTCAGGCAATCGTTGCAATCCTCTTGTTTAAGGTAACTGAAACTGATGGGGAGGTTGCTACAGGTCCAAAATCTTGGCTAACAATCGCAGTTCAGTTTATTGTGGCGATGCTCGTGTTGGACACTTGGCAATATTTCATTCATAGATACATGCATCAGAACAAGTTTCTATACAAGCACGTCCATTCCCAGCATCACCGTTTGGTTGTACCTTATGCATTTGGAGCTTTATACAATCATCCGTTGGAGGGTCTTCTCCTTGACACAATCGGCGGGGCTTTATCTTTTCTTGTTTCTGGGATGTCGCCTCGAGTTGCCATCTTTTTCTTTTCCTTTGCCACCATCAAGACAGTGGATGACCATTGTGGATTATGGCTTCCTGGGAACCTTTTCCACGTGTTCTTCAGAAACAATTCTGCATATCATGATGTCCACCACCAGCTATATGGCAGTAAGTATAACTTCTCACAGCCATTTTTTGTTACGTGGGATAGAATATTTGGCACCTACATGCCTTACTCATTAGAGAAGAGAGCAGGGGGTGGTTTCGAAGCGCGAGTTAAGGAAGATTAG MGIVISDQILGTFVPIVVYWLYSGLYILLGSFENYRLHSKKDELEKNLVSKSTVVRGVFLQQIIQAIVAILLFKVTETDGEVATGPKSWLTIAVQFIVAMLVLDTWQYFIHRYMHQNKFLYKHVHSQHHRLVVPYAFGALYNHPLEGLLLDTIGGALSFLVSGMSPRVAIFFFSFATIKTVDDHCGLWLPGNLFHVFFRNNSAYHDVHHQLYGSKYNFSQPFFVTWDRIFGTYMPYSLEKRAGGGFEARVKED Homology
BLAST of MELO3C012088.jh1 vs. NCBI nr
Match: XP_008446343.1 (PREDICTED: sphinganine C4-monooxygenase 2 [Cucumis melo] >KAA0034409.1 sphinganine C4-monooxygenase 2 [Cucumis melo var. makuwa] >TYK17723.1 sphinganine C4-monooxygenase 2 [Cucumis melo var. makuwa]) HSP 1 Score: 509 bits (1310), Expect = 7.68e-182 Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0
BLAST of MELO3C012088.jh1 vs. NCBI nr
Match: XP_004135460.1 (sphinganine C4-monooxygenase 2 [Cucumis sativus] >KGN51908.1 hypothetical protein Csa_008088 [Cucumis sativus]) HSP 1 Score: 507 bits (1306), Expect = 3.13e-181 Identity = 252/253 (99.60%), Postives = 252/253 (99.60%), Query Frame = 0
BLAST of MELO3C012088.jh1 vs. NCBI nr
Match: XP_022151262.1 (sphinganine C4-monooxygenase 2-like [Momordica charantia]) HSP 1 Score: 492 bits (1267), Expect = 2.76e-175 Identity = 243/253 (96.05%), Postives = 247/253 (97.63%), Query Frame = 0
BLAST of MELO3C012088.jh1 vs. NCBI nr
Match: XP_022987574.1 (sphinganine C4-monooxygenase 2-like [Cucurbita maxima] >KAG7032210.1 Sphinganine C4-monooxygenase 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 490 bits (1261), Expect = 2.27e-174 Identity = 240/253 (94.86%), Postives = 247/253 (97.63%), Query Frame = 0
BLAST of MELO3C012088.jh1 vs. NCBI nr
Match: XP_038892349.1 (sphinganine C4-monooxygenase 2 [Benincasa hispida]) HSP 1 Score: 489 bits (1260), Expect = 3.22e-174 Identity = 242/253 (95.65%), Postives = 245/253 (96.84%), Query Frame = 0
BLAST of MELO3C012088.jh1 vs. ExPASy Swiss-Prot
Match: Q9AST3 (Sphinganine C4-monooxygenase 2 OS=Arabidopsis thaliana OX=3702 GN=SBH2 PE=1 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 9.8e-114 Identity = 196/250 (78.40%), Postives = 221/250 (88.40%), Query Frame = 0
BLAST of MELO3C012088.jh1 vs. ExPASy Swiss-Prot
Match: Q8VYI1 (Sphinganine C4-monooxygenase 1 OS=Arabidopsis thaliana OX=3702 GN=SBH1 PE=1 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 1.7e-113 Identity = 193/250 (77.20%), Postives = 222/250 (88.80%), Query Frame = 0
BLAST of MELO3C012088.jh1 vs. ExPASy Swiss-Prot
Match: B8B4W4 (Very-long-chain aldehyde decarbonylase GL1-9 OS=Oryza sativa subsp. indica OX=39946 GN=GL1-9 PE=3 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 7.8e-95 Identity = 165/252 (65.48%), Postives = 201/252 (79.76%), Query Frame = 0
BLAST of MELO3C012088.jh1 vs. ExPASy Swiss-Prot
Match: Q0D4G3 (Very-long-chain aldehyde decarbonylase GL1-9 OS=Oryza sativa subsp. japonica OX=39947 GN=GL1-9 PE=2 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 7.8e-95 Identity = 165/252 (65.48%), Postives = 201/252 (79.76%), Query Frame = 0
BLAST of MELO3C012088.jh1 vs. ExPASy Swiss-Prot
Match: O94298 (Sphingolipid C4-hydroxylase sur2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sur2 PE=3 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 8.7e-54 Identity = 106/253 (41.90%), Postives = 147/253 (58.10%), Query Frame = 0
BLAST of MELO3C012088.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SZ77 (Sphinganine C4-monooxygenase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00520 PE=3 SV=1) HSP 1 Score: 509 bits (1310), Expect = 3.72e-182 Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0
BLAST of MELO3C012088.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BEC5 (sphinganine C4-monooxygenase 2 OS=Cucumis melo OX=3656 GN=LOC103489111 PE=3 SV=1) HSP 1 Score: 509 bits (1310), Expect = 3.72e-182 Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0
BLAST of MELO3C012088.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KQL6 (Fatty acid hydroxylase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G605020 PE=3 SV=1) HSP 1 Score: 507 bits (1306), Expect = 1.51e-181 Identity = 252/253 (99.60%), Postives = 252/253 (99.60%), Query Frame = 0
BLAST of MELO3C012088.jh1 vs. ExPASy TrEMBL
Match: A0A6J1DD01 (sphinganine C4-monooxygenase 2-like OS=Momordica charantia OX=3673 GN=LOC111019225 PE=3 SV=1) HSP 1 Score: 492 bits (1267), Expect = 1.34e-175 Identity = 243/253 (96.05%), Postives = 247/253 (97.63%), Query Frame = 0
BLAST of MELO3C012088.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JJ91 (sphinganine C4-monooxygenase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111485096 PE=3 SV=1) HSP 1 Score: 490 bits (1261), Expect = 1.10e-174 Identity = 240/253 (94.86%), Postives = 247/253 (97.63%), Query Frame = 0
BLAST of MELO3C012088.jh1 vs. TAIR 10
Match: AT1G14290.1 (sphingoid base hydroxylase 2 ) HSP 1 Score: 411.0 bits (1055), Expect = 7.0e-115 Identity = 196/250 (78.40%), Postives = 221/250 (88.40%), Query Frame = 0
BLAST of MELO3C012088.jh1 vs. TAIR 10
Match: AT1G69640.1 (sphingoid base hydroxylase 1 ) HSP 1 Score: 410.2 bits (1053), Expect = 1.2e-114 Identity = 193/250 (77.20%), Postives = 222/250 (88.80%), Query Frame = 0
BLAST of MELO3C012088.jh1 vs. TAIR 10
Match: AT2G29390.3 (sterol 4-alpha-methyl-oxidase 2-2 ) HSP 1 Score: 74.3 bits (181), Expect = 1.5e-13 Identity = 68/238 (28.57%), Postives = 106/238 (44.54%), Query Frame = 0
BLAST of MELO3C012088.jh1 vs. TAIR 10
Match: AT2G29390.2 (sterol 4-alpha-methyl-oxidase 2-2 ) HSP 1 Score: 74.3 bits (181), Expect = 1.5e-13 Identity = 68/238 (28.57%), Postives = 106/238 (44.54%), Query Frame = 0
BLAST of MELO3C012088.jh1 vs. TAIR 10
Match: AT2G29390.1 (sterol 4-alpha-methyl-oxidase 2-2 ) HSP 1 Score: 72.8 bits (177), Expect = 4.5e-13 Identity = 69/248 (27.82%), Postives = 108/248 (43.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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