Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCAAGTGCAGCAAAAAACGGCGCCAGTCACGAGAGTCACATCCGCCATATGGCGGCAAATCGCCCCCTTCGCTTTCCTTTCAAAAACCCTAACACACTCCTTAATTCCTCCCGAAATTCATCGTCGGTGCCATTTTCTAGAACATATGCCATCGGAGATTCGAAGATCAAGAACCGCATTGCGTGTGAGATCAAGAATTTCGAGAATACTTATCAGTGGACTATCGAAAGCGTTCCTGGTACTACTGATTCTTTTTGCTCAATTCAAAATTCTGCTTCTATTTCGACCTCCGTTCCAATGGCTGCTGCCTCCGCCGCCGTCGCGGCTTTGGAATTGACTTCTAAAACCGACGCCAAGAAGATCTGCCTCTTTTTCTGCCCGGAGACGAAGACTCTTGCGGAGAAATTAATCGCTGACGAGTCTGATGGAATTGATCTGCGTAGTATCTCATGGAGGTTAGTTAGATTGCTTTAGCCATGCTGGAGGAAATATATTCGATAGTGTTTCATTTGTGCGTTAATTTTAGTTCTGAATACGAATTATCGATGTGACGTTCCGGAATGATCAAATGTGATTTTAGTTGTCGATTTCCATTTCAGACCTTAAATTATTGTATTTTATTTATTCATTTAGTGCATGCCCTTATTACTGCCTCATTAAATTCCTTCTTTTTTCTAGAAACAATATATGGGGTGATGAAATGGAACTTCTAAAGTGTACAACTTTTTGCTAGTTGAGGGGTCATACT
mRNA sequence
CCCAAGTGCAGCAAAAAACGGCGCCAGTCACGAGAGTCACATCCGCCATATGGCGGCAAATCGCCCCCTTCGCTTTCCTTTCAAAAACCCTAACACACTCCTTAATTCCTCCCGAAATTCATCGTCGGTGCCATTTTCTAGAACATATGCCATCGGAGATTCGAAGATCAAGAACCGCATTGCGTGTGAGATCAAGAATTTCGAGAATACTTATCAGTGGACTATCGAAAGCGTTCCTGGTACTACTGATTCTTTTTGCTCAATTCAAAATTCTGCTTCTATTTCGACCTCCGTTCCAATGGCTGCTGCCTCCGCCGCCGTCGCGGCTTTGGAATTGACTTCTAAAACCGACGCCAAGAAGATCTGCCTCTTTTTCTGCCCGGAGACGAAGACTCTTGCGGAGAAATTAATCGCTGACGAGTCTGATGGAATTGATCTGCGTAGTATCTCATGGAGAAACAATATATGGGGTGATGAAATGGAACTTCTAAAGTGTACAACTTTTTGCTAGTTGAGGGGTCATACT
Coding sequence (CDS)
ATGGCGGCAAATCGCCCCCTTCGCTTTCCTTTCAAAAACCCTAACACACTCCTTAATTCCTCCCGAAATTCATCGTCGGTGCCATTTTCTAGAACATATGCCATCGGAGATTCGAAGATCAAGAACCGCATTGCGTGTGAGATCAAGAATTTCGAGAATACTTATCAGTGGACTATCGAAAGCGTTCCTGGTACTACTGATTCTTTTTGCTCAATTCAAAATTCTGCTTCTATTTCGACCTCCGTTCCAATGGCTGCTGCCTCCGCCGCCGTCGCGGCTTTGGAATTGACTTCTAAAACCGACGCCAAGAAGATCTGCCTCTTTTTCTGCCCGGAGACGAAGACTCTTGCGGAGAAATTAATCGCTGACGAGTCTGATGGAATTGATCTGCGTAGTATCTCATGGAGAAACAATATATGGGGTGATGAAATGGAACTTCTAAAGTGTACAACTTTTTGCTAG
Protein sequence
MAANRPLRFPFKNPNTLLNSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIESVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEKLIADESDGIDLRSISWRNNIWGDEMELLKCTTFC
Homology
BLAST of MELO3C011909 vs. NCBI nr
Match:
XP_008446110.1 (PREDICTED: ribose-phosphate pyrophosphokinase 3, mitochondrial-like [Cucumis melo])
HSP 1 Score: 304.7 bits (779), Expect = 4.6e-79
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
Query: 1 MAANRPLRFPFKNPNTLLNSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE 60
MAANRPLRFPFKNPNTLLNSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE
Sbjct: 1 MAANRPLRFPFKNPNTLLNSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE 60
Query: 61 SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEKL 120
SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEKL
Sbjct: 61 SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEKL 120
Query: 121 IADESDGIDLRSISWRNNIWGDEMELLKCTTFC 154
IADESDGIDLRSISWRNNIWGDEMELLKCTTFC
Sbjct: 121 IADESDGIDLRSISWRNNIWGDEMELLKCTTFC 153
BLAST of MELO3C011909 vs. NCBI nr
Match:
KAA0034233.1 (ribose-phosphate pyrophosphokinase 3 [Cucumis melo var. makuwa] >TYK15687.1 ribose-phosphate pyrophosphokinase 3 [Cucumis melo var. makuwa])
HSP 1 Score: 265.0 bits (676), Expect = 4.0e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
Query: 1 MAANRPLRFPFKNPNTLLNSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE 60
MAANRPLRFPFKNPNTLLNSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE
Sbjct: 1 MAANRPLRFPFKNPNTLLNSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE 60
Query: 61 SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEKL 120
SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEKL
Sbjct: 61 SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEKL 120
Query: 121 IADESDGIDLRSISWR 137
IADESDGIDLRSISWR
Sbjct: 121 IADESDGIDLRSISWR 136
BLAST of MELO3C011909 vs. NCBI nr
Match:
TYK15636.1 (ribose-phosphate pyrophosphokinase 4-like [Cucumis melo var. makuwa])
HSP 1 Score: 255.0 bits (650), Expect = 4.1e-64
Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 0
Query: 1 MAANRPLRFPFKNPNTLLNSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE 60
MAANRPL FPFKNPNTLL+SSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE
Sbjct: 1 MAANRPLHFPFKNPNTLLDSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE 60
Query: 61 SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEKL 120
SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEK
Sbjct: 61 SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEK- 120
Query: 121 IADESDGIDLRSISWR 137
IADESDGIDLRSISWR
Sbjct: 121 IADESDGIDLRSISWR 135
BLAST of MELO3C011909 vs. NCBI nr
Match:
XP_008446171.1 (PREDICTED: ribose-phosphate pyrophosphokinase 4-like [Cucumis melo] >KAA0034283.1 ribose-phosphate pyrophosphokinase 4-like [Cucumis melo var. makuwa])
HSP 1 Score: 255.0 bits (650), Expect = 4.1e-64
Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 0
Query: 1 MAANRPLRFPFKNPNTLLNSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE 60
MAANRPL FPFKNPNTLL+SSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE
Sbjct: 1 MAANRPLHFPFKNPNTLLDSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE 60
Query: 61 SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEKL 120
SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEK
Sbjct: 61 SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEK- 120
Query: 121 IADESDGIDLRSISWR 137
IADESDGIDLRSISWR
Sbjct: 121 IADESDGIDLRSISWR 135
BLAST of MELO3C011909 vs. NCBI nr
Match:
XP_004135267.1 (ribose-phosphate pyrophosphokinase 3, mitochondrial isoform X1 [Cucumis sativus] >KGN51768.1 hypothetical protein Csa_008952 [Cucumis sativus])
HSP 1 Score: 242.3 bits (617), Expect = 2.8e-60
Identity = 125/136 (91.91%), Postives = 128/136 (94.12%), Query Frame = 0
Query: 1 MAANRPLRFPFKNPNTLLNSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE 60
MAANRPLRF FKNPNTLLNSSRN SSVPFSRTYAIGDSKIKNRIACEIKNFEN+Y WTIE
Sbjct: 1 MAANRPLRFSFKNPNTLLNSSRNPSSVPFSRTYAIGDSKIKNRIACEIKNFENSYHWTIE 60
Query: 61 SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEKL 120
SVPGTTDSFCSIQNSAS STS+PMA ASAA+AALELTSK DAKKICLFFCPETK LAEK
Sbjct: 61 SVPGTTDSFCSIQNSASTSTSIPMATASAAIAALELTSKNDAKKICLFFCPETKALAEK- 120
Query: 121 IADESDGIDLRSISWR 137
IADESDGIDLRSISWR
Sbjct: 121 IADESDGIDLRSISWR 135
BLAST of MELO3C011909 vs. ExPASy Swiss-Prot
Match:
Q9XGA0 (Ribose-phosphate pyrophosphokinase 3, mitochondrial OS=Spinacia oleracea OX=3562 GN=PRS3 PE=2 SV=1)
HSP 1 Score: 50.1 bits (118), Expect = 2.7e-05
Identity = 47/133 (35.34%), Postives = 66/133 (49.62%), Query Frame = 0
Query: 4 NRPLRFPFKNPNTLLNSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIESVP 63
+R L P KNP + +S S FS + I+ R+ +F+N +W
Sbjct: 6 HRHLLQPCKNP-AISSSETLKPSSSFSLSSNPSIPLIRRRLPTFRCDFQNRRKWM----- 65
Query: 64 GTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEKLIAD 123
D S N I VP + +++ + S +KK+CLF+CPETK LAE+ IA
Sbjct: 66 -NVDHHISKLNPIQI---VP-NSRRFQMSSNQENSVEFSKKVCLFYCPETKALAER-IAA 125
Query: 124 ESDGIDLRSISWR 137
+SD I LRSISWR
Sbjct: 126 QSDAIQLRSISWR 126
BLAST of MELO3C011909 vs. ExPASy TrEMBL
Match:
A0A1S3BEZ0 (ribose-phosphate pyrophosphokinase 3, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103488934 PE=4 SV=1)
HSP 1 Score: 304.7 bits (779), Expect = 2.2e-79
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
Query: 1 MAANRPLRFPFKNPNTLLNSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE 60
MAANRPLRFPFKNPNTLLNSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE
Sbjct: 1 MAANRPLRFPFKNPNTLLNSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE 60
Query: 61 SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEKL 120
SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEKL
Sbjct: 61 SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEKL 120
Query: 121 IADESDGIDLRSISWRNNIWGDEMELLKCTTFC 154
IADESDGIDLRSISWRNNIWGDEMELLKCTTFC
Sbjct: 121 IADESDGIDLRSISWRNNIWGDEMELLKCTTFC 153
BLAST of MELO3C011909 vs. ExPASy TrEMBL
Match:
A0A5A7SUT8 (Ribose-phosphate pyrophosphokinase 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001850 PE=4 SV=1)
HSP 1 Score: 265.0 bits (676), Expect = 1.9e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
Query: 1 MAANRPLRFPFKNPNTLLNSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE 60
MAANRPLRFPFKNPNTLLNSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE
Sbjct: 1 MAANRPLRFPFKNPNTLLNSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE 60
Query: 61 SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEKL 120
SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEKL
Sbjct: 61 SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEKL 120
Query: 121 IADESDGIDLRSISWR 137
IADESDGIDLRSISWR
Sbjct: 121 IADESDGIDLRSISWR 136
BLAST of MELO3C011909 vs. ExPASy TrEMBL
Match:
A0A5A7SUX6 (Ribose-phosphate pyrophosphokinase 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G002820 PE=3 SV=1)
HSP 1 Score: 255.0 bits (650), Expect = 2.0e-64
Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 0
Query: 1 MAANRPLRFPFKNPNTLLNSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE 60
MAANRPL FPFKNPNTLL+SSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE
Sbjct: 1 MAANRPLHFPFKNPNTLLDSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE 60
Query: 61 SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEKL 120
SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEK
Sbjct: 61 SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEK- 120
Query: 121 IADESDGIDLRSISWR 137
IADESDGIDLRSISWR
Sbjct: 121 IADESDGIDLRSISWR 135
BLAST of MELO3C011909 vs. ExPASy TrEMBL
Match:
A0A5D3CYX6 (Ribose-phosphate pyrophosphokinase 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001330 PE=3 SV=1)
HSP 1 Score: 255.0 bits (650), Expect = 2.0e-64
Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 0
Query: 1 MAANRPLRFPFKNPNTLLNSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE 60
MAANRPL FPFKNPNTLL+SSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE
Sbjct: 1 MAANRPLHFPFKNPNTLLDSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE 60
Query: 61 SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEKL 120
SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEK
Sbjct: 61 SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEK- 120
Query: 121 IADESDGIDLRSISWR 137
IADESDGIDLRSISWR
Sbjct: 121 IADESDGIDLRSISWR 135
BLAST of MELO3C011909 vs. ExPASy TrEMBL
Match:
A0A1S3BDX8 (ribose-phosphate pyrophosphokinase 4-like OS=Cucumis melo OX=3656 GN=LOC103488976 PE=3 SV=1)
HSP 1 Score: 255.0 bits (650), Expect = 2.0e-64
Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 0
Query: 1 MAANRPLRFPFKNPNTLLNSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE 60
MAANRPL FPFKNPNTLL+SSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE
Sbjct: 1 MAANRPLHFPFKNPNTLLDSSRNSSSVPFSRTYAIGDSKIKNRIACEIKNFENTYQWTIE 60
Query: 61 SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEKL 120
SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEK
Sbjct: 61 SVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEK- 120
Query: 121 IADESDGIDLRSISWR 137
IADESDGIDLRSISWR
Sbjct: 121 IADESDGIDLRSISWR 135
BLAST of MELO3C011909 vs. TAIR 10
Match:
AT1G10700.1 (phosphoribosyl pyrophosphate (PRPP) synthase 3 )
HSP 1 Score: 43.1 bits (100), Expect = 2.3e-04
Identity = 40/119 (33.61%), Postives = 66/119 (55.46%), Query Frame = 0
Query: 19 NSSRNSSSVPFSRTYAIGDSKIKNR-IACEIKNFENTYQWTIESVPGTTDSFCSIQNSAS 78
+SS +SSS P + + + NR I C +++ EN D I ++
Sbjct: 24 SSSLSSSSSPSFLNFK--TASVSNRCIKCGVRSLENHSGHRSLDFLSNGDPISLINPNS- 83
Query: 79 ISTSVPMAAASAAVAALELTSKTDAKKICLFFCPETKTLAEKLIADESDGIDLRSISWR 137
S+ + MAAA++ E SK+ +K++CLF ET+ LAE+++A +SD I+LRSI+W+
Sbjct: 84 -SSPITMAAATS-----ESGSKS-SKRVCLFHSDETRDLAERIVA-KSDCIELRSINWK 131
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_008446110.1 | 4.6e-79 | 100.00 | PREDICTED: ribose-phosphate pyrophosphokinase 3, mitochondrial-like [Cucumis mel... | [more] |
| KAA0034233.1 | 4.0e-67 | 100.00 | ribose-phosphate pyrophosphokinase 3 [Cucumis melo var. makuwa] >TYK15687.1 ribo... | [more] |
| TYK15636.1 | 4.1e-64 | 97.79 | ribose-phosphate pyrophosphokinase 4-like [Cucumis melo var. makuwa] | [more] |
| XP_008446171.1 | 4.1e-64 | 97.79 | PREDICTED: ribose-phosphate pyrophosphokinase 4-like [Cucumis melo] >KAA0034283.... | [more] |
| XP_004135267.1 | 2.8e-60 | 91.91 | ribose-phosphate pyrophosphokinase 3, mitochondrial isoform X1 [Cucumis sativus]... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q9XGA0 | 2.7e-05 | 35.34 | Ribose-phosphate pyrophosphokinase 3, mitochondrial OS=Spinacia oleracea OX=3562... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S3BEZ0 | 2.2e-79 | 100.00 | ribose-phosphate pyrophosphokinase 3, mitochondrial-like OS=Cucumis melo OX=3656... | [more] |
| A0A5A7SUT8 | 1.9e-67 | 100.00 | Ribose-phosphate pyrophosphokinase 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
| A0A5A7SUX6 | 2.0e-64 | 97.79 | Ribose-phosphate pyrophosphokinase 4-like OS=Cucumis melo var. makuwa OX=1194695... | [more] |
| A0A5D3CYX6 | 2.0e-64 | 97.79 | Ribose-phosphate pyrophosphokinase 4-like OS=Cucumis melo var. makuwa OX=1194695... | [more] |
| A0A1S3BDX8 | 2.0e-64 | 97.79 | ribose-phosphate pyrophosphokinase 4-like OS=Cucumis melo OX=3656 GN=LOC10348897... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G10700.1 | 2.3e-04 | 33.61 | phosphoribosyl pyrophosphate (PRPP) synthase 3 | [more] |
